View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15491_high_28 (Length: 321)
Name: NF15491_high_28
Description: NF15491
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15491_high_28 |
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Alignment Details
Target: chr5 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 11 - 303
Target Start/End: Complemental strand, 37028480 - 37028188
Alignment:
| Q |
11 |
cacagatgccttatatgtggacactatataatagccaattattaattaaactaagttgtttactcaaatacacccttaaaagttacaacacacaagatat |
110 |
Q |
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| T |
37028480 |
cacagatgccgtatatgtggacactatataatagccaattattaattaaactaagttgtttactcaaatacacccttaaaagttacaacacacaagatat |
37028381 |
T |
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| Q |
111 |
aaatcttattttcttaggtaattaaaaccttaagactagcctataaagatgacaaaaccccataaacacattattagtagcacaaaaaagatgcttgcaa |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
37028380 |
aaatcttattttcttaggtaattaaaaccttaagactagcctataaagatgacaaaaccccatacacacattattagtagcacaaaaaagatgcttgcaa |
37028281 |
T |
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| Q |
211 |
cacaagtaaaccaacttcattgttcactaatctagaagttgaccaagagtgatggtgcggaatgtctccattgatggtgattttgacataaca |
303 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
37028280 |
cacaagtaaaccaaattcattgttcactaatctagaagttgaccaagagtgatggtgcagaatgtctccattgatggtgattttgacataaca |
37028188 |
T |
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