View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15491_high_46 (Length: 217)
Name: NF15491_high_46
Description: NF15491
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15491_high_46 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 44646547 - 44646763
Alignment:
| Q |
1 |
acattcagattattaaaatagtgtgagagagccgtcaaggaatcggagaaggcagaaagtgttaggaatcggaggaggcactttctgccttcagaaaata |
100 |
Q |
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| T |
44646547 |
acattcagattattaaaatagtgtgagagagccgtcaaggaatcggagaaggcagaaagtgttaggaatcggaggaggcactttctgccttcagaaaata |
44646646 |
T |
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| Q |
101 |
tatgataaatccaatcgcaggcgcttcagaaattaaatagtataaatagatagatatttcaacaattttgtgatcatagttaataatcagtcataagcac |
200 |
Q |
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| T |
44646647 |
tatgataaatccaatcgcaggcggttcagaaattaaatagtataaatagatagatatttcaacaattttgtgatcatagttaataatcagtcataagcac |
44646746 |
T |
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| Q |
201 |
atacaaagccaataatc |
217 |
Q |
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||||||||||||||||| |
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| T |
44646747 |
atacaaagccaataatc |
44646763 |
T |
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