View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15491_low_26 (Length: 400)
Name: NF15491_low_26
Description: NF15491
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15491_low_26 |
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Alignment Details
Target: chr6 (Bit Score: 329; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 35 - 383
Target Start/End: Original strand, 31061523 - 31061871
Alignment:
| Q |
35 |
atgaaagccaaaaagatcaagtatctcatcatccgaaaaaccaaataaaatcataaaatatctgaggagaattagagagcaatgactcatcaatagcatc |
134 |
Q |
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| T |
31061523 |
atgaaagccaaaaagatcaagtatctcatcatccgaaaaaccaaataaaatcataaaatatctgaggagaatcagagagcaatgattcatcaatagcatc |
31061622 |
T |
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| Q |
135 |
actaagatactcctaattttgattacctgcctcaccttgtggagctacctcaataaaattattaaatcaagcaaagtggatatatatgcataattgtctt |
234 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31061623 |
actaagatactcctaattttgattacatgcctcaccttgtggagctacctcaataaaattattaaatcaagcaaagtggatatatatgcataattgtctt |
31061722 |
T |
|
| Q |
235 |
ctttgcttgattgaactcccgttaattgaactgcttgaccatcctgcatatcatctaagatcattctgttccaaatagttacaaaatatcatcaatgtca |
334 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
31061723 |
ctttgcttgattgaactcccgttaattgaactgcttgaccatcctgcatatcatctaagatcattctgttccaaatagttagaaaatatcatcaatgtca |
31061822 |
T |
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| Q |
335 |
tttgcatcagtcaaagcaacgatagtgttaattagtatatcacatgtat |
383 |
Q |
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||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
31061823 |
tttgcattagtcaaagcaacgatagtgttaattagtatatcacatgtat |
31061871 |
T |
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