View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15491_low_36 (Length: 326)
Name: NF15491_low_36
Description: NF15491
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15491_low_36 |
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Alignment Details
Target: chr7 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 40736047 - 40735738
Alignment:
| Q |
1 |
tggctcatattcattgataagtatgcagatgcacaagcatagtggacctaaaatcgcaatgagcatagtggaaccctcaacactatgattttgggataaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||| |
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| T |
40736047 |
tggctcatattcattgataagtatgcagatgcacaagcatagtggacctaaaattgcaatgagcatagtggaaccctcaaaactatgatttagggataaa |
40735948 |
T |
|
| Q |
101 |
cttgtaatctggatcgtaatatttaaacacaacttgactcaatggtcacgctattgtgagagaagtatacacgattgaccgaaccttgtgatcaaatgct |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
40735947 |
cttgtaatctggatcgtaatatttaaacacaacttgactcaatggtcacgctattgtgagagaagtatacacgattgaccgaaccttatgatcaaatgct |
40735848 |
T |
|
| Q |
201 |
atgttcttgtacatttatttatctatttagagccaggttggctattctaagatttaccgtttcaaagttatattatgtatcaataatcctactactatat |
300 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
40735847 |
atgttcttgtacatttatttatctatttagagccagattggctattctaagatttaccgtttcaaagttctattatgtatcaataatcctactactatat |
40735748 |
T |
|
| Q |
301 |
aaaaggtaac |
310 |
Q |
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|||||||||| |
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| T |
40735747 |
aaaaggtaac |
40735738 |
T |
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