View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15491_low_5 (Length: 593)

Name: NF15491_low_5
Description: NF15491
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15491_low_5
NF15491_low_5
[»] chr5 (41 HSPs)
chr5 (22-577)||(40433549-40434099)
chr5 (22-66)||(33750986-33751030)
chr5 (14-135)||(15061760-15061880)
chr5 (22-63)||(37274817-37274858)
chr5 (14-66)||(11956208-11956260)
chr5 (14-66)||(15060232-15060284)
chr5 (14-66)||(15616436-15616488)
chr5 (14-66)||(30798515-30798567)
chr5 (22-66)||(33847179-33847223)
chr5 (14-66)||(41064213-41064265)
chr5 (89-134)||(40434474-40434519)
chr5 (22-66)||(4061454-4061498)
chr5 (22-66)||(11438407-11438451)
chr5 (14-66)||(11957585-11957637)
chr5 (22-66)||(21775530-21775574)
chr5 (22-66)||(21776851-21776895)
chr5 (14-66)||(30796647-30796699)
chr5 (14-66)||(41065593-41065645)
chr5 (80-135)||(9751678-9751733)
chr5 (18-65)||(10011683-10011730)
chr5 (16-135)||(15615103-15615221)
chr5 (448-498)||(41014980-41015030)
chr5 (80-133)||(5700665-5700718)
chr5 (25-66)||(29521377-29521418)
chr5 (475-572)||(35731964-35732061)
chr5 (22-62)||(8367943-8367983)
chr5 (22-66)||(10012752-10012796)
chr5 (22-66)||(29520203-29520247)
chr5 (84-135)||(15396476-15396527)
chr5 (89-135)||(11438339-11438385)
chr5 (80-134)||(13948584-13948638)
chr5 (80-134)||(28819537-28819591)
chr5 (89-123)||(33847748-33847782)
chr5 (36-66)||(39419643-39419673)
chr5 (89-122)||(5984004-5984037)
chr5 (410-498)||(17755177-17755260)
chr5 (80-135)||(9750447-9750503)
chr5 (89-133)||(11465891-11465935)
chr5 (80-135)||(35599312-35599368)
chr5 (422-498)||(38346896-38346972)
chr5 (22-66)||(40434544-40434588)
[»] chr3 (44 HSPs)
chr3 (11-66)||(22257268-22257323)
chr3 (22-135)||(15093658-15093771)
chr3 (14-66)||(10615343-10615395)
chr3 (14-66)||(10616708-10616760)
chr3 (22-66)||(28208090-28208134)
chr3 (14-65)||(48288298-48288349)
chr3 (24-66)||(2011124-2011166)
chr3 (89-135)||(12210028-12210074)
chr3 (25-66)||(37976037-37976078)
chr3 (14-135)||(46610009-46610129)
chr3 (22-66)||(18705022-18705066)
chr3 (22-66)||(27315262-27315306)
chr3 (22-66)||(43930745-43930789)
chr3 (23-135)||(46596095-46596206)
chr3 (80-135)||(41749386-41749441)
chr3 (89-135)||(12066229-12066275)
chr3 (32-66)||(14826030-14826064)
chr3 (24-66)||(14995979-14996021)
chr3 (33-66)||(14824819-14824852)
chr3 (436-517)||(51616357-51616438)
chr3 (22-66)||(2011905-2011949)
chr3 (22-66)||(15086291-15086335)
chr3 (22-66)||(22256271-22256315)
chr3 (22-66)||(37977454-37977498)
chr3 (30-66)||(38842186-38842222)
chr3 (22-66)||(46597453-46597497)
chr3 (35-66)||(12071583-12071614)
chr3 (80-135)||(18142199-18142254)
chr3 (469-516)||(21754254-21754301)
chr3 (14-53)||(28207059-28207098)
chr3 (80-135)||(54566512-54566566)
chr3 (32-66)||(3190583-3190617)
chr3 (80-122)||(10615288-10615330)
chr3 (89-135)||(18140940-18140986)
chr3 (436-497)||(38692402-38692461)
chr3 (89-135)||(46207113-46207159)
chr3 (89-135)||(46597519-46597565)
chr3 (32-66)||(51116279-51116313)
chr3 (27-64)||(27318151-27318188)
chr3 (473-513)||(2101660-2101700)
chr3 (485-541)||(16792276-16792332)
chr3 (22-66)||(23539332-23539376)
chr3 (22-66)||(23545470-23545514)
chr3 (470-538)||(38884909-38884977)
[»] chr1 (45 HSPs)
chr1 (22-135)||(8930292-8930403)
chr1 (14-135)||(13917208-13917327)
chr1 (11-66)||(44311275-44311330)
chr1 (16-66)||(52084764-52084814)
chr1 (22-66)||(5560940-5560984)
chr1 (14-66)||(9441636-9441688)
chr1 (14-66)||(9442926-9442978)
chr1 (15-66)||(14626716-14626767)
chr1 (23-66)||(37194435-37194478)
chr1 (24-66)||(13916159-13916201)
chr1 (25-66)||(30536435-30536476)
chr1 (14-66)||(14625438-14625490)
chr1 (22-66)||(37193546-37193590)
chr1 (22-66)||(37269605-37269649)
chr1 (23-66)||(4487608-4487651)
chr1 (23-66)||(23321332-23321375)
chr1 (24-66)||(23322556-23322598)
chr1 (89-135)||(38742392-38742438)
chr1 (26-66)||(2273568-2273608)
chr1 (22-66)||(6077008-6077052)
chr1 (11-66)||(27548892-27548948)
chr1 (22-66)||(30537457-30537501)
chr1 (80-135)||(31648075-31648131)
chr1 (22-66)||(37268891-37268935)
chr1 (22-66)||(38741543-38741587)
chr1 (80-135)||(8928815-8928870)
chr1 (461-516)||(15190884-15190939)
chr1 (80-134)||(16786150-16786205)
chr1 (89-135)||(47145146-47145193)
chr1 (80-135)||(49201387-49201442)
chr1 (22-64)||(2274607-2274649)
chr1 (471-533)||(3335144-3335206)
chr1 (469-515)||(12913236-12913282)
chr1 (89-135)||(13903382-13903428)
chr1 (89-135)||(24545457-24545503)
chr1 (89-135)||(24963014-24963060)
chr1 (80-134)||(31648588-31648642)
chr1 (89-135)||(33645014-33645060)
chr1 (89-135)||(43635835-43635881)
chr1 (89-135)||(44311208-44311254)
chr1 (90-135)||(40246277-40246322)
chr1 (80-135)||(8984853-8984909)
chr1 (436-516)||(11613060-11613140)
chr1 (469-541)||(43391532-43391604)
chr1 (22-66)||(43635901-43635945)
[»] scaffold0250 (3 HSPs)
scaffold0250 (22-66)||(11513-11557)
scaffold0250 (95-135)||(10080-10120)
scaffold0250 (22-66)||(10148-10192)
[»] scaffold0129 (2 HSPs)
scaffold0129 (22-66)||(37336-37380)
scaffold0129 (20-66)||(30793-30839)
[»] chr4 (41 HSPs)
chr4 (22-122)||(21994340-21994437)
chr4 (22-66)||(43537519-43537563)
chr4 (23-66)||(51754144-51754187)
chr4 (14-66)||(29248310-29248362)
chr4 (14-66)||(29249646-29249698)
chr4 (14-66)||(34739957-34740009)
chr4 (14-66)||(34741330-34741382)
chr4 (11-66)||(54555283-54555338)
chr4 (16-66)||(43537776-43537826)
chr4 (16-66)||(50879976-50880026)
chr4 (14-135)||(20962194-20962314)
chr4 (26-66)||(2438320-2438360)
chr4 (14-66)||(12566875-12566927)
chr4 (14-66)||(20963636-20963688)
chr4 (23-66)||(51752751-51752794)
chr4 (453-543)||(28139909-28139999)
chr4 (24-66)||(37421848-37421890)
chr4 (24-66)||(46426169-46426211)
chr4 (28-66)||(49629701-49629739)
chr4 (22-66)||(9410225-9410269)
chr4 (80-135)||(9410284-9410340)
chr4 (469-516)||(32657562-32657607)
chr4 (27-63)||(37600875-37600911)
chr4 (22-62)||(40479461-40479501)
chr4 (22-66)||(55499319-55499363)
chr4 (80-135)||(34027196-34027251)
chr4 (14-61)||(46427183-46427230)
chr4 (23-66)||(50881369-50881412)
chr4 (80-135)||(51754202-51754257)
chr4 (80-135)||(54554383-54554438)
chr4 (89-135)||(14183611-14183657)
chr4 (24-66)||(15694529-15694571)
chr4 (32-66)||(52264512-52264546)
chr4 (82-135)||(49629635-49629687)
chr4 (469-497)||(4148443-4148471)
chr4 (22-58)||(9410076-9410112)
chr4 (89-133)||(12352470-12352514)
chr4 (22-66)||(15695121-15695165)
chr4 (469-505)||(20989519-20989555)
chr4 (26-66)||(49630546-49630586)
chr4 (22-66)||(55500349-55500393)
[»] chr2 (45 HSPs)
chr2 (14-66)||(21903993-21904045)
chr2 (14-66)||(38876058-38876110)
chr2 (14-66)||(38876958-38877010)
chr2 (15-66)||(18416611-18416662)
chr2 (11-66)||(22293478-22293533)
chr2 (23-66)||(36565304-36565347)
chr2 (14-66)||(1902999-1903051)
chr2 (14-66)||(1904345-1904397)
chr2 (14-66)||(38815030-38815082)
chr2 (14-66)||(38936012-38936064)
chr2 (14-66)||(38936998-38937050)
chr2 (14-66)||(38937445-38937497)
chr2 (11-66)||(41307081-41307136)
chr2 (17-66)||(44366936-44366985)
chr2 (22-66)||(10355076-10355120)
chr2 (23-66)||(7576394-7576437)
chr2 (80-135)||(15747751-15747806)
chr2 (11-66)||(39151251-39151306)
chr2 (16-118)||(7577715-7577816)
chr2 (17-66)||(11101163-11101211)
chr2 (13-58)||(28756488-28756533)
chr2 (22-66)||(5969797-5969841)
chr2 (22-58)||(10355265-10355301)
chr2 (22-66)||(16670567-16670611)
chr2 (22-66)||(18249699-18249743)
chr2 (22-66)||(23834649-23834693)
chr2 (22-66)||(38813644-38813688)
chr2 (22-66)||(41305950-41305994)
chr2 (22-66)||(44368329-44368373)
chr2 (27-66)||(11102115-11102154)
chr2 (22-65)||(16671748-16671791)
chr2 (27-66)||(18250839-18250878)
chr2 (80-122)||(16670512-16670554)
chr2 (89-135)||(19686190-19686236)
chr2 (89-135)||(38937519-38937565)
chr2 (33-66)||(8238055-8238088)
chr2 (89-134)||(34404601-34404646)
chr2 (89-134)||(39227090-39227135)
chr2 (471-516)||(44458228-44458273)
chr2 (22-66)||(5970701-5970745)
chr2 (22-66)||(12301070-12301114)
chr2 (22-66)||(22292547-22292591)
chr2 (95-135)||(23835789-23835829)
chr2 (468-516)||(24097766-24097814)
chr2 (88-132)||(28141691-28141735)
[»] scaffold0093 (1 HSPs)
scaffold0093 (25-66)||(8995-9036)
[»] chr6 (28 HSPs)
chr6 (22-135)||(56057-56169)
chr6 (14-66)||(24234398-24234450)
chr6 (22-62)||(33485020-33485060)
chr6 (22-64)||(6000615-6000657)
chr6 (17-66)||(22056551-22056600)
chr6 (22-118)||(12322748-12322842)
chr6 (14-66)||(22058215-22058267)
chr6 (14-66)||(24235567-24235619)
chr6 (22-66)||(24914507-24914551)
chr6 (33-66)||(6759073-6759106)
chr6 (472-541)||(13427711-13427780)
chr6 (22-66)||(54874-54918)
chr6 (22-62)||(11424830-11424870)
chr6 (472-540)||(34881705-34881773)
chr6 (80-135)||(3119320-3119375)
chr6 (473-516)||(5048508-5048551)
chr6 (471-538)||(21869857-21869924)
chr6 (80-135)||(28583547-28583602)
chr6 (17-51)||(5999793-5999827)
chr6 (89-135)||(6000682-6000728)
chr6 (481-539)||(9742522-9742580)
chr6 (23-65)||(12321632-12321674)
chr6 (32-66)||(21939189-21939223)
chr6 (36-66)||(22253235-22253265)
chr6 (81-135)||(32614172-32614226)
chr6 (470-498)||(9053920-9053948)
chr6 (103-135)||(9234815-9234847)
chr6 (95-135)||(11425785-11425825)
[»] scaffold0227 (1 HSPs)
scaffold0227 (22-62)||(24882-24922)
[»] scaffold0040 (2 HSPs)
scaffold0040 (22-66)||(64571-64615)
scaffold0040 (22-66)||(65987-66031)
[»] chr8 (40 HSPs)
chr8 (22-66)||(6105624-6105668)
chr8 (14-66)||(27163185-27163237)
chr8 (14-122)||(27164595-27164702)
chr8 (14-66)||(39810023-39810075)
chr8 (455-514)||(16950273-16950332)
chr8 (22-66)||(1601198-1601242)
chr8 (22-66)||(3252231-3252275)
chr8 (14-66)||(5704467-5704519)
chr8 (22-66)||(28574607-28574651)
chr8 (14-66)||(39808716-39808768)
chr8 (27-66)||(28561969-28562008)
chr8 (27-66)||(28567467-28567506)
chr8 (23-66)||(39913880-39913923)
chr8 (80-134)||(34901503-34901557)
chr8 (24-66)||(42350124-42350166)
chr8 (22-66)||(1600143-1600187)
chr8 (22-66)||(1602843-1602887)
chr8 (22-66)||(5703121-5703165)
chr8 (94-134)||(28561435-28561475)
chr8 (94-134)||(28566933-28566973)
chr8 (89-135)||(1601673-1601720)
chr8 (80-135)||(39513867-39513922)
chr8 (448-538)||(4114730-4114819)
chr8 (80-118)||(9768306-9768344)
chr8 (436-498)||(18899953-18900015)
chr8 (80-122)||(19158169-19158211)
chr8 (36-66)||(24359032-24359062)
chr8 (24-66)||(28575059-28575101)
chr8 (33-66)||(9768260-9768293)
chr8 (33-66)||(21397838-21397871)
chr8 (33-66)||(21792331-21792364)
chr8 (33-66)||(24359675-24359708)
chr8 (25-66)||(28561502-28561543)
chr8 (25-66)||(28567000-28567041)
chr8 (461-498)||(37051628-37051665)
chr8 (469-498)||(44806292-44806321)
chr8 (22-62)||(1601743-1601783)
chr8 (80-116)||(8304179-8304215)
chr8 (95-135)||(40702027-40702067)
chr8 (22-62)||(42349033-42349073)
[»] chr7 (33 HSPs)
chr7 (14-66)||(17763405-17763457)
chr7 (14-66)||(17764636-17764688)
chr7 (22-66)||(24436330-24436374)
chr7 (14-66)||(48170198-48170250)
chr7 (22-135)||(9553400-9553513)
chr7 (25-66)||(47638765-47638806)
chr7 (14-66)||(1830880-1830932)
chr7 (22-66)||(9554204-9554248)
chr7 (22-66)||(34158126-34158170)
chr7 (22-66)||(35891075-35891119)
chr7 (23-66)||(8175913-8175956)
chr7 (80-135)||(23806229-23806283)
chr7 (89-135)||(1831990-1832036)
chr7 (436-573)||(5336465-5336600)
chr7 (22-64)||(11056803-11056845)
chr7 (89-135)||(33757410-33757456)
chr7 (17-66)||(13772580-13772629)
chr7 (22-66)||(1831925-1831969)
chr7 (80-135)||(20164425-20164480)
chr7 (80-135)||(42509040-42509095)
chr7 (22-56)||(47637794-47637828)
chr7 (469-498)||(7245947-7245976)
chr7 (473-542)||(28613246-28613315)
chr7 (94-135)||(35891010-35891051)
chr7 (469-538)||(38622877-38622946)
chr7 (80-135)||(5219038-5219094)
chr7 (22-66)||(8174953-8174997)
chr7 (22-66)||(11058117-11058161)
chr7 (28-56)||(22718512-22718540)
chr7 (22-66)||(25274728-25274772)
chr7 (22-66)||(25776450-25776494)
chr7 (22-66)||(33767334-33767378)
chr7 (22-66)||(37413787-37413831)
[»] scaffold0176 (1 HSPs)
scaffold0176 (11-66)||(220-275)
[»] scaffold0210 (3 HSPs)
scaffold0210 (23-66)||(4776-4819)
scaffold0210 (22-65)||(5837-5880)
scaffold0210 (22-56)||(16697-16731)
[»] scaffold0933 (2 HSPs)
scaffold0933 (94-135)||(2734-2775)
scaffold0933 (27-57)||(2667-2697)
[»] scaffold0246 (2 HSPs)
scaffold0246 (22-62)||(17400-17440)
scaffold0246 (22-62)||(15947-15987)
[»] scaffold0112 (1 HSPs)
scaffold0112 (22-58)||(36138-36174)
[»] scaffold0228 (3 HSPs)
scaffold0228 (22-64)||(8153-8195)
scaffold0228 (22-64)||(15735-15777)
scaffold0228 (22-64)||(25687-25729)
[»] scaffold0027 (1 HSPs)
scaffold0027 (80-117)||(51450-51487)
[»] scaffold0913 (1 HSPs)
scaffold0913 (472-516)||(1279-1323)
[»] scaffold0898 (1 HSPs)
scaffold0898 (472-516)||(4278-4322)
[»] scaffold0291 (1 HSPs)
scaffold0291 (22-66)||(20908-20952)


Alignment Details
Target: chr5 (Bit Score: 449; Significance: 0; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 449; E-Value: 0
Query Start/End: Original strand, 22 - 577
Target Start/End: Complemental strand, 40434099 - 40433549
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaannnnnnnnnnnnnacaggggataaaatcaaaagtgccctatattacagggggtaa 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||             |||||||  ||||||||||||||||||||||||||| |||||    
T  40434099 gggggcaatcctgaagaatctttattttacaaggacggaatctaattttttttt----acaggggc-aaaatcaaaagtgccctatattacaggaggtaa 40434005  T
Q  122 aagtctattaacccnnnnnnnnntatacatttgtgtaaagttaaacagctaatgaaaatttagatcttctgttcacagagtatcaccatcatcactgact 221  Q
    ||||||||||| ||         ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40434004 aagtctattaatccgaaaaaaaatatacatttgtgtgaagttaaacagctaatgaaaatttagatcttctgttcacagagtatcaccatcatcactgact 40433905  T
Q  222 tcattgatgctcagaagtattctgtttgtcttcccctacgtcttcttctggaaatgaagaaccctcggtgctcaatatgctttggcatactctaaaaccc 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40433904 tcattgatgctcagaagtattctgtttgtcttcccctacgtcttcttctggaaatgaagaaccctcggtgctcaatatgctttggcatactctaaaaccc 40433805  T
Q  322 atcaaaataaaacattcgttagttttattctagagataaaatcaatggatgtaatgaataaagtgttaataacaggcggtcttgtcaatcgcggattgtg 421  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40433804 atcaaaataaaacattcattagttttattctagagataaaatcaatggatgtaatgaataaagtgttaataacaggcggtcttgtcaatcgcggattgtg 40433705  T
Q  422 gaaaatatcgtttggttcaaattccactacactacagttctatatcaccgctatttgacaacactttgtactaaataatgtgtcgtggaacaatactgtt 521  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  40433704 gaaaatatcgtttggttcaaattccactacactacagttctataccaccgctatttgacaacactttgtactaaataatgtatcgtggaacaatactgtt 40433605  T
Q  522 ttgttcagattctgctatgccatggcgccatagcagctatttgacaacactacttg 577  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40433604 ttgttcagattctgctatgccatggcgccatagcagctatttgacaacactacttg 40433549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 33751030 - 33750986
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  33751030 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 33750986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 135
Target Start/End: Original strand, 15061760 - 15061880
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaannnnnnnnnnnnnacaggggataaaatcaaaagtgccctatattaca 113  Q
    ||||||| |||||||||| ||||||||||| ||||||||||||||||||||||             |||||||  |||| ||||||||||||||||||||    
T  15061760 agggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa-atttatttttttacagggggcaaaaccaaaagtgccctatattaca 15061858  T
Q  114 gggggtaaaagtctattaaccc 135  Q
    |||||||||   ||||||||||    
T  15061859 gggggtaaagacctattaaccc 15061880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 37274858 - 37274817
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatc 63  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  37274858 gggggcaatcctgaagaatctttattttacaaggacggaatc 37274817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 11956260 - 11956208
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||| |||||||||| ||||||||||| ||||||||||||||||||||||    
T  11956260 agggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 11956208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 15060284 - 15060232
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||| |||||||||| ||||||||||| ||||||||||||||||||||||    
T  15060284 agggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 15060232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 15616436 - 15616488
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||| |||||||||| ||||||||||| ||||||||||||||||||||||    
T  15616436 agggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 15616488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 30798515 - 30798567
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||| |||||||||| ||||||||||| ||||||||||||||||||||||    
T  30798515 agggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 30798567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 33847223 - 33847179
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  33847223 gggggcaatcctgaagaatctttattttacaaggacagaatctaa 33847179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 41064265 - 41064213
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||| |||||||||| ||||||||||| ||||||||||||||||||||||    
T  41064265 agggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 41064213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 89 - 134
Target Start/End: Complemental strand, 40434519 - 40434474
Alignment:
Q  89 aaaatcaaaagtgccctatattacagggggtaaaagtctattaacc 134  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||    
T  40434519 aaaatcaaaagtgccatataatacagggggtaaaagtctattaacc 40434474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 4061454 - 4061498
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||| |||||||||||||||||||||||||||||||| |||||||    
T  4061454 ggggacaatcctgaagaatctttattttacaaggacgaaatctaa 4061498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 11438451 - 11438407
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||| |||||||||||||||||||||||||| |||||||||||||    
T  11438451 ggggacaatcctgaagaatctttattttacatggacggaatctaa 11438407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 11957585 - 11957637
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||| |||||||||| ||||||||| | ||||||||||||||||||||||    
T  11957585 agggctcagggggcaatcttgaagaatcgtcattttacaaggacggaatctaa 11957637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 21775574 - 21775530
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||    
T  21775574 gggggcaatcttgaagaatcttcattttacaaggacggaatctaa 21775530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 21776851 - 21776895
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||    
T  21776851 gggggcaatcttgaagaatcttcattttacaaggacggaatctaa 21776895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 30796699 - 30796647
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||| ||| |||||| ||||||||||| ||||||||||||||||||||||    
T  30796699 agggctcagggtgcaatcttgaagaatcttcattttacaaggacggaatctaa 30796647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 41065593 - 41065645
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||| |||||||||| ||||||||||| |||||||||||| |||||||||    
T  41065593 agggctcagggggcaatcttgaagaatcttcattttacaaggaaggaatctaa 41065645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 9751678 - 9751733
Alignment:
Q  80 acaggggataaaatcaaaagtgccctatattacagggggtaaaagtctattaaccc 135  Q
    |||||||  |||| |||||||| |||||||||||||||||||||| ||||||||||    
T  9751678 acagggggcaaaaccaaaagtgacctatattacagggggtaaaagcctattaaccc 9751733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 10011730 - 10011683
Alignment:
Q  18 ctcggggggcaatcctgaagaatctttattttacaaggacggaatcta 65  Q
    |||| ||||||||| |||||||||||||||||| ||||||||||||||    
T  10011730 ctcgaggggcaatcgtgaagaatctttattttataaggacggaatcta 10011683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 15615221 - 15615103
Alignment:
Q  16 ggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaannnnnnnnnnnnnacaggggataaaatcaaaagtgccctatattacagg 115  Q
    ||||| |||||||||| ||||||||||| | ||||||||||||||||||||             || ||||| |||| ||||||||||||||||||||||    
T  15615221 ggctcagggggcaatcttgaagaatcttcaatttacaaggacggaatctaa-aaaaaaaattttaccggggacaaaaccaaaagtgccctatattacagg 15615123  T
Q  116 gggtaaaagtctattaaccc 135  Q
    |||||||   ||||||||||    
T  15615122 gggtaaagacctattaaccc 15615103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 448 - 498
Target Start/End: Original strand, 41014980 - 41015030
Alignment:
Q  448 ctacactacagttctatatcaccgctatttgacaacactttgtactaaata 498  Q
    |||||||||||| ||||||| | ||||| ||||||||||||||||||||||    
T  41014980 ctacactacagtgctatatcgcagctatatgacaacactttgtactaaata 41015030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 80 - 133
Target Start/End: Original strand, 5700665 - 5700718
Alignment:
Q  80 acaggggataaaatcaaaagtgccctatattacagggggtaaaagtctattaac 133  Q
    |||||||  ||||||||||||| |||||||| ||||||||||| ||||||||||    
T  5700665 acaggggggaaaatcaaaagtgacctatattgcagggggtaaaggtctattaac 5700718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 29521377 - 29521418
Alignment:
Q  25 ggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||| ||||||||||| ||||||||||||||||||||||    
T  29521377 ggcaatcgtgaagaatcttcattttacaaggacggaatctaa 29521418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 475 - 572
Target Start/End: Complemental strand, 35732061 - 35731964
Alignment:
Q  475 tttgacaacactttgtactaaataatgtgtcgtggaacaatactgttttgttcagattctgctatgccatggcgccatagcagctatttgacaacact 572  Q
    ||||||||||||||||||||||||||||||||  ||| || |  | |||||||| |||| |||| || |||| |   |||| ||||||||||||||||    
T  35732061 tttgacaacactttgtactaaataatgtgtcgcagaagaagaacggtttgttcaaattccgctacgcaatggtgttgtagccgctatttgacaacact 35731964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 8367943 - 8367983
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaat 62  Q
    |||||||||| ||||||||||| ||||||||||||||||||    
T  8367943 gggggcaatcgtgaagaatcttcattttacaaggacggaat 8367983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 10012752 - 10012796
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||| ||||||||||| |||||||||||||| |||||||    
T  10012752 gggggcaatcgtgaagaatcttcattttacaaggacgaaatctaa 10012796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 29520247 - 29520203
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||| ||||||||||| ||||||||| ||||||||||||    
T  29520247 gggggcaatcgtgaagaatcttcattttacaaagacggaatctaa 29520203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 15396476 - 15396527
Alignment:
Q  84 gggataaaatcaaaagtgccctatattacagggggtaaaagtctattaaccc 135  Q
    |||| ||||||| ||||| | |||||||||||||||||||| ||||||||||    
T  15396476 gggaaaaaatcagaagtgacatatattacagggggtaaaagcctattaaccc 15396527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 11438385 - 11438339
Alignment:
Q  89 aaaatcaaaagtgccctatattacagggggtaaaagtctattaaccc 135  Q
    |||| ||||||| |||||||||||||||||||||  |||||||||||    
T  11438385 aaaaccaaaagtaccctatattacagggggtaaagctctattaaccc 11438339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 13948584 - 13948638
Alignment:
Q  80 acaggggataaaatcaaaagtgccctatattacagggggtaaaagtctattaacc 134  Q
    |||||||  |||| |||||||||||||||||||||| |||||| | |||||||||    
T  13948584 acagggggcaaaaccaaaagtgccctatattacaggaggtaaaggcctattaacc 13948638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 28819591 - 28819537
Alignment:
Q  80 acaggggataaaatcaaaagtgccctatattacagggggtaaaagtctattaacc 134  Q
    |||||||  |||| |||||||| |||||||||||||||||||| | |||||||||    
T  28819591 acagggggcaaaaccaaaagtgacctatattacagggggtaaaggcctattaacc 28819537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 123
Target Start/End: Original strand, 33847748 - 33847782
Alignment:
Q  89 aaaatcaaaagtgccctatattacagggggtaaaa 123  Q
    |||||||||||||||||||||||||||||| ||||    
T  33847748 aaaatcaaaagtgccctatattacagggggcaaaa 33847782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 36 - 66
Target Start/End: Original strand, 39419643 - 39419673
Alignment:
Q  36 agaatctttattttacaaggacggaatctaa 66  Q
    |||||||||||||||||||||||||||||||    
T  39419643 agaatctttattttacaaggacggaatctaa 39419673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 122
Target Start/End: Original strand, 5984004 - 5984037
Alignment:
Q  89 aaaatcaaaagtgccctatattacagggggtaaa 122  Q
    |||||||||||||| |||||||||||||||||||    
T  5984004 aaaatcaaaagtgctctatattacagggggtaaa 5984037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 498
Target Start/End: Original strand, 17755177 - 17755260
Alignment:
Q  410 tcgcggattgtggaaaatat-cgtttggttcaaattccactacactacagttctatatcaccgctatttgacaacactttgtactaaata 498  Q
    ||||||||| |||||||||| |||||| ||||||||||||||||     || |||||   || |||||||||||||||||||||||||||    
T  17755177 tcgcggattatggaaaatattcgtttg-ttcaaattccactaca-----gtgctatagtgcctctatttgacaacactttgtactaaata 17755260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 9750503 - 9750447
Alignment:
Q  80 acaggggataaaatcaaaagtgccctatattac-agggggtaaaagtctattaaccc 135  Q
    |||||||| |||| |||||||| |||||||||| |||||||||| | ||||||||||    
T  9750503 acaggggacaaaaccaaaagtgacctatattacaagggggtaaaggcctattaaccc 9750447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 11465935 - 11465891
Alignment:
Q  89 aaaatcaaaagtgccctatattacagggggtaaaagtctattaac 133  Q
    |||| |||||||| | |||||| ||||||||||||||||||||||    
T  11465935 aaaaccaaaagtgacatatattgcagggggtaaaagtctattaac 11465891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 35599368 - 35599312
Alignment:
Q  80 acaggggataaaatcaaaagtgccctatattacag-ggggtaaaagtctattaaccc 135  Q
    |||||||  |||| |||||||| |||||||||||| |||||||| ||||||||||||    
T  35599368 acagggggcaaaaccaaaagtgacctatattacaggggggtaaaggtctattaaccc 35599312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 422 - 498
Target Start/End: Complemental strand, 38346972 - 38346896
Alignment:
Q  422 gaaaatatcgtttggttcaaattccactacactacagttctatatcaccgctatttgacaacactttgtactaaata 498  Q
    ||||||| || || |||||||||   |||| | ||||| ||||| |||||||||||||||||| |||||| ||||||    
T  38346972 gaaaatagcggttagttcaaattttgctacccaacagtgctatagcaccgctatttgacaacattttgtagtaaata 38346896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 40434588 - 40434544
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||| ||||| ||||||||||| |||||||||||| |||||||||    
T  40434588 ggggacaatcgtgaagaatcttcattttacaaggatggaatctaa 40434544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 4e-18; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 22257268 - 22257323
Alignment:
Q  11 caaagggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  22257268 caaagggctcggggggaaatcctgaagaatctttattttacaaggacagaatctaa 22257323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 15093658 - 15093771
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaannnnnnnnnnnnnacaggggataaaatcaaaagtgccctatattacagggggtaa 121  Q
    ||||||||||||||||||||||||||||||||||| |||||||||             |||||||  |||||||||||| |||||||||| |||||||||    
T  15093658 gggggcaatcctgaagaatctttattttacaaggatggaatctaaaaaaaaaaaatttacagggggcaaaatcaaaagtaccctatattatagggggtaa 15093757  T
Q  122 aagtctattaaccc 135  Q
    |  |||||||||||    
T  15093758 agttctattaaccc 15093771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 10615395 - 10615343
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||| |||||||||| ||||||||||| ||||||||||||||||||||||    
T  10615395 agggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 10615343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 10616708 - 10616760
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||| |||||||||| ||||||||||| ||||||||||||||||||||||    
T  10616708 agggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 10616760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 28208090 - 28208134
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||| ||||||||||||||||||||||||||||||||||    
T  28208090 gggggcaatcttgaagaatctttattttacaaggacggaatctaa 28208134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 48288298 - 48288349
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaatcta 65  Q
    ||||||| || ||| |||||||||||||||||||||||||||||||||||||    
T  48288298 agggctcaggaggcgatcctgaagaatctttattttacaaggacggaatcta 48288349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 2011166 - 2011124
Alignment:
Q  24 gggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  2011166 gggcaatcctgaagaatctttattttacaaggacagaatctaa 2011124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 12210074 - 12210028
Alignment:
Q  89 aaaatcaaaagtgccctatattacagggggtaaaagtctattaaccc 135  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||    
T  12210074 aaaaccaaaagtgacctatattacagggggtaaaagtctattaaccc 12210028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 37976078 - 37976037
Alignment:
Q  25 ggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  37976078 ggcaatcctggagaatctttattttacaaggacggaatctaa 37976037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 14 - 135
Target Start/End: Complemental strand, 46610129 - 46610009
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaannnnnnnnnnnnnacaggggataaaatcaaaagtgccctatattaca 113  Q
    ||||||| ||| |||||| ||||||||||| ||||||||||||||||||||||             |||||||  |||| ||||||||||||||||||||    
T  46610129 agggctcagggagcaatcttgaagaatcttcattttacaaggacggaatctaa-aaaaaaaaaattacagggggcaaaaccaaaagtgccctatattaca 46610031  T
Q  114 gggggtaaaagtctattaaccc 135  Q
    |||||||||   ||||||||||    
T  46610030 gggggtaaagacctattaaccc 46610009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 18705066 - 18705022
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||    
T  18705066 gggggcaatcctgaagaatctttatttgacaaggaaggaatctaa 18705022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 27315306 - 27315262
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||    
T  27315306 gggggcaatcctgaaaaatctttattttacaaggacgggatctaa 27315262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 43930745 - 43930789
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||| |||||||||||||||||||||||| |||||||||    
T  43930745 gggggcaatcttgaagaatctttattttacaaggatggaatctaa 43930789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 135
Target Start/End: Complemental strand, 46596206 - 46596095
Alignment:
Q  23 ggggcaatcctgaagaatctttattttacaaggacggaatctaannnnnnnnnnnnnacaggggataaaatcaaaagtgccctatattacagggggtaaa 122  Q
    ||||||||||||||||||||||||||||||| || |||||||||             ||| |||| |||| ||||||| |||||||||||||||||||||    
T  46596206 ggggcaatcctgaagaatctttattttacaatgatggaatctaa-gtttttttttttacatgggacaaaaccaaaagtaccctatattacagggggtaaa 46596108  T
Q  123 agtctattaaccc 135  Q
      |||||||||||    
T  46596107 gctctattaaccc 46596095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 41749441 - 41749386
Alignment:
Q  80 acaggggataaaatcaaaagtgccctatattacagggggtaaaagtctattaaccc 135  Q
    |||||||| ||||||||||||| ||||||||||| |||||||| | ||||||||||    
T  41749441 acaggggagaaaatcaaaagtgacctatattacaaggggtaaaggcctattaaccc 41749386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 12066275 - 12066229
Alignment:
Q  89 aaaatcaaaagtgccctatattacagggggtaaaagtctattaaccc 135  Q
    ||||||||||||| |||||||||||||||||||||  ||||||||||    
T  12066275 aaaatcaaaagtgacctatattacagggggtaaaaaactattaaccc 12066229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 66
Target Start/End: Original strand, 14826030 - 14826064
Alignment:
Q  32 ctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||||||||||||||||||||||||||||    
T  14826030 ctgaagaatctttattttacaaggacggaatctaa 14826064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 14995979 - 14996021
Alignment:
Q  24 gggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||| ||||||||||||||||||||||||||| |||||||    
T  14995979 gggcaatactgaagaatctttattttacaaggacgaaatctaa 14996021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 33 - 66
Target Start/End: Complemental strand, 14824852 - 14824819
Alignment:
Q  33 tgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||||||||||||||||||||||||||||||    
T  14824852 tgaagaatctttattttacaaggacggaatctaa 14824819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 436 - 517
Target Start/End: Original strand, 51616357 - 51616438
Alignment:
Q  436 gttcaaattccactacactacagttctatatcaccgctatttgacaacactttgtactaaataatgtgtcgtggaacaatac 517  Q
    ||||||||||| |||   |||||| | ||| |||||||||||||||||||| |||| ||||||  || ||||||||||||||    
T  51616357 gttcaaattccgctatgttacagtgcaatagcaccgctatttgacaacactctgtattaaatagcgtatcgtggaacaatac 51616438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 2011905 - 2011949
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||| ||||||||||||||||||||||||||||||  ||||||||    
T  2011905 ggggacaatcctgaagaatctttattttacaaggatagaatctaa 2011949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 15086335 - 15086291
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||  ||||||||||| ||||||||||||||||||||||    
T  15086335 gggggcaattgtgaagaatcttcattttacaaggacggaatctaa 15086291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 22256315 - 22256271
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||| |||| ||||||||||| ||||||||||||||||||||||    
T  22256315 gggggtaatcgtgaagaatcttcattttacaaggacggaatctaa 22256271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 37977454 - 37977498
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||| |||||| |||| ||||||||||||||||||||||    
T  37977454 gggggcaatcatgaagattcttcattttacaaggacggaatctaa 37977498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 66
Target Start/End: Complemental strand, 38842222 - 38842186
Alignment:
Q  30 tcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||||||||||||||||||||| ||||||||    
T  38842222 tcctgaagaatctttattttacaaggacagaatctaa 38842186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 46597453 - 46597497
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||  ||||||||||| ||||||||||||||||||||||    
T  46597453 gggggcaattgtgaagaatcttcattttacaaggacggaatctaa 46597497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 12071614 - 12071583
Alignment:
Q  35 aagaatctttattttacaaggacggaatctaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  12071614 aagaatctttattttacaaggacggaatctaa 12071583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 18142199 - 18142254
Alignment:
Q  80 acaggggataaaatcaaaagtgccctatattacagggggtaaaagtctattaaccc 135  Q
    |||||||  |||| |||||||| |||||||||||||||||||| | ||||||||||    
T  18142199 acagggggcaaaaccaaaagtgacctatattacagggggtaaaggcctattaaccc 18142254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 469 - 516
Target Start/End: Complemental strand, 21754301 - 21754254
Alignment:
Q  469 ccgctatttgacaacactttgtactaaataatgtgtcgtggaacaata 516  Q
    |||||||||||||||| ||||||||||||| ||| ||| |||||||||    
T  21754301 ccgctatttgacaacaatttgtactaaatagtgtatcgcggaacaata 21754254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 28207098 - 28207059
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaa 53  Q
    ||||||| |||||||||| |||||||||||||||||||||    
T  28207098 agggctcagggggcaatcttgaagaatctttattttacaa 28207059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 54566566 - 54566512
Alignment:
Q  80 acaggggataaaatcaaaagtgccctatattacagggggtaaaagtctattaaccc 135  Q
    |||||||| |||| |||||||| ||||||||||| |||||||| ||||||||||||    
T  54566566 acaggggacaaaaccaaaagtgacctatattaca-ggggtaaaggtctattaaccc 54566512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 32 - 66
Target Start/End: Original strand, 3190583 - 3190617
Alignment:
Q  32 ctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||||||||||||||||| ||||||||||    
T  3190583 ctgaagaatctttattttacaagggcggaatctaa 3190617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 80 - 122
Target Start/End: Complemental strand, 10615330 - 10615288
Alignment:
Q  80 acaggggataaaatcaaaagtgccctatattacagggggtaaa 122  Q
    |||||||  |||| |||||||||||||||||||||||||||||    
T  10615330 acagggggcaaaaccaaaagtgccctatattacagggggtaaa 10615288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 18140986 - 18140940
Alignment:
Q  89 aaaatcaaaagtgccctatattacagggggtaaaagtctattaaccc 135  Q
    |||| |||||||| |||||||||||||||||||| | ||||||||||    
T  18140986 aaaaccaaaagtgacctatattacagggggtaaaggcctattaaccc 18140940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 436 - 497
Target Start/End: Original strand, 38692402 - 38692461
Alignment:
Q  436 gttcaaattccactacactacagttctatatcaccgctatttgacaacactttgtactaaat 497  Q
    ||||||||| ||| |||||| ||| ||||| |  ||||||||||||||||||||||||||||    
T  38692402 gttcaaatttcacaacactagagtgctatagc--cgctatttgacaacactttgtactaaat 38692461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 46207159 - 46207113
Alignment:
Q  89 aaaatcaaaagtgccctatattacagggggtaaaagtctattaaccc 135  Q
    ||||||||||||| |||||||| |||||| |||| ||||||||||||    
T  46207159 aaaatcaaaagtgacctatattgcaggggataaatgtctattaaccc 46207113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 135
Target Start/End: Original strand, 46597519 - 46597565
Alignment:
Q  89 aaaatcaaaagtgccctatattacagggggtaaaagtctattaaccc 135  Q
    |||| |||||||||||||||||||||||||||||   ||||||||||    
T  46597519 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 46597565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 32 - 66
Target Start/End: Complemental strand, 51116313 - 51116279
Alignment:
Q  32 ctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||||||||||||||||||| ||||||||    
T  51116313 ctgaagaatctttattttacaaggactgaatctaa 51116279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 64
Target Start/End: Complemental strand, 27318188 - 27318151
Alignment:
Q  27 caatcctgaagaatctttattttacaaggacggaatct 64  Q
    ||||||||||||||||||||||||||| ||| ||||||    
T  27318188 caatcctgaagaatctttattttacaaagacagaatct 27318151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 473 - 513
Target Start/End: Original strand, 2101660 - 2101700
Alignment:
Q  473 tatttgacaacactttgtactaaataatgtgtcgtggaaca 513  Q
    |||||||||||||||||||||||||| ||| ||| ||||||    
T  2101660 tatttgacaacactttgtactaaatagtgtatcgcggaaca 2101700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 485 - 541
Target Start/End: Complemental strand, 16792332 - 16792276
Alignment:
Q  485 ctttgtactaaataatgtgtcgtggaacaatactgttttgttcagattctgctatgc 541  Q
    |||||||||||||| ||| ||| ||||||||| || |||||||| |||||| |||||    
T  16792332 ctttgtactaaatattgtatcgcggaacaatagtggtttgttcaaattctgttatgc 16792276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 23539376 - 23539332
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||||| ||||||||| ||||||| |||| |||||||||    
T  23539376 gggggcaatcctaaagaatcttcattttacgaggatggaatctaa 23539332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 23545470 - 23545514
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||||||||||||||| ||||||| | || |||||||||    
T  23545470 gggggcaatcctgaagaatcttcattttacgatgatggaatctaa 23545514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 470 - 538
Target Start/End: Original strand, 38884909 - 38884977
Alignment:
Q  470 cgctatttgacaacactttgtactaaataatgtgtcgtggaacaatactgttttgttcagattctgcta 538  Q
    |||||||| |||| | ||||||||||||| | | |  |||||||||| |||||||||||||| ||||||    
T  38884909 cgctatttcacaatattttgtactaaatactctattctggaacaatagtgttttgttcagatcctgcta 38884977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 6e-17; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 8930292 - 8930403
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaannnnnnnnnnnnnacaggggataaaatcaaaagtgccctatattacagggggtaa 121  Q
    ||||||||||||||||||||||||||||||||||||| |||||||             |||||||| |||| ||||||| || |||||||||||||||||    
T  8930292 gggggcaatcctgaagaatctttattttacaaggacgaaatctaa--tttttttttttacaggggacaaaaccaaaagtaccttatattacagggggtaa 8930389  T
Q  122 aagtctattaaccc 135  Q
    || |||||||||||    
T  8930390 aactctattaaccc 8930403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 14 - 135
Target Start/End: Original strand, 13917208 - 13917327
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaannnnnnnnnnnnnacaggggataaaatcaaaagtgccctatattaca 113  Q
    ||||||| || ||||||| ||||||||||||||||||||||||||||||||||             |||||||| |||| |||||||| |||||||||||    
T  13917208 agggctcaggaggcaatcttgaagaatctttattttacaaggacggaatctaa--aaataaaaattacaggggagaaaaccaaaagtgtcctatattaca 13917305  T
Q  114 gggggtaaaagtctattaaccc 135  Q
    |||| ||||| |||||||||||    
T  13917306 ggggataaaactctattaaccc 13917327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 44311330 - 44311275
Alignment:
Q  11 caaagggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||| |||||||||||| |||||||||||||||||||| |||||||||||||    
T  44311330 caaagggcacggggggcaatcttgaagaatctttattttacatggacggaatctaa 44311275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 52084764 - 52084814
Alignment:
Q  16 ggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  52084764 ggctcagggggcaatcttgaagaatctttattttacaaggacggaatctaa 52084814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 5560984 - 5560940
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||| ||||||||||||||||||||||||||||||||||    
T  5560984 gggggcaatcttgaagaatctttattttacaaggacggaatctaa 5560940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 9441688 - 9441636
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||| |||||||||| ||||||||||| ||||||||||||||||||||||    
T  9441688 agggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 9441636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 9442926 - 9442978
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||| |||||||||| ||||||||||| ||||||||||||||||||||||    
T  9442926 agggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 9442978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 14626716 - 14626767
Alignment:
Q  15 gggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||| |||||||||| ||||||||||| ||||||||||||||||||||||    
T  14626716 gggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 14626767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 37194435 - 37194478
Alignment:
Q  23 ggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  37194435 ggggcaatcttgaagaatctttattttacaaggacggaatctaa 37194478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 13916201 - 13916159
Alignment:
Q  24 gggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  13916201 gggcaatcttgaagaatctttattttacaaggacggaatctaa 13916159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 30536476 - 30536435
Alignment:
Q  25 ggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  30536476 ggcaatcatgaagaatctttattttacaaggacggaatctaa 30536435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 14625490 - 14625438
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||| | |||||||| ||||||||||| ||||||||||||||||||||||    
T  14625490 agggctcagagggcaatcttgaagaatcttcattttacaaggacggaatctaa 14625438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 37193590 - 37193546
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||| |||||||||||||||||||||||| |||||||||    
T  37193590 gggggcaatcttgaagaatctttattttacaaggatggaatctaa 37193546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 37269605 - 37269649
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||||||||||||||||||| |||||||||| |||||||    
T  37269605 gggggcaatcctgaagaatctttattgtacaaggacgaaatctaa 37269649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 4487651 - 4487608
Alignment:
Q  23 ggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||||||||||||||||||||||||||||  |||||||    
T  4487651 ggggcaatcctgaagaatctttattttacaaggacaaaatctaa 4487608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 23321375 - 23321332
Alignment:
Q  23 ggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||    
T  23321375 ggggcaatcgtgaagaatcttcattttacaaggacggaatctaa 23321332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 23322556 - 23322598
Alignment:
Q  24 gggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||| ||||||||||| ||||||||||||||||||||||    
T  23322556 gggcaatcgtgaagaatcttcattttacaaggacggaatctaa 23322598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 89 - 135
Target Start/End: Original strand, 38742392 - 38742438
Alignment:
Q  89 aaaatcaaaagtgccctatattacagggggtaaaagtctattaaccc 135  Q
    |||||||||||| |||||||||||||||||||||  |||||||||||    
T  38742392 aaaatcaaaagtaccctatattacagggggtaaagctctattaaccc 38742438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 2273608 - 2273568
Alignment:
Q  26 gcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||| ||||||||||| ||||||||||||||||||||||    
T  2273608 gcaatcgtgaagaatcttcattttacaaggacggaatctaa 2273568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 6077052 - 6077008
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||| ||||||||||| |||||||||||||| |||||||    
T  6077052 gggggcaatcgtgaagaatcttcattttacaaggacgaaatctaa 6077008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 27548892 - 27548948
Alignment:
Q  11 caaagggctcgggg-ggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||| ||||||| |||||| |||||||||||| |||||||||||||| |||||||    
T  27548892 caaaggcctcggggaggcaatactgaagaatcttaattttacaaggacgaaatctaa 27548948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 30537457 - 30537501
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||| |||||||||||||||||||||||| |||||||| ||||||    
T  30537457 ggggacaatcctgaagaatctttattttataaggacggtatctaa 30537501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 31648131 - 31648075
Alignment:
Q  80 acaggggataaaatcaaaagtgccctatattaca-gggggtaaaagtctattaaccc 135  Q
    ||||||||||||| |||||||| ||||||||||| ||||||||| | ||||||||||    
T  31648131 acaggggataaaaccaaaagtgacctatattacatgggggtaaaggcctattaaccc 31648075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 37268935 - 37268891
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||||||||||||||| ||||||||| ||| |||||||||||    
T  37268935 gggggcaatcctgaagaatttttattttataagaacggaatctaa 37268891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 38741587 - 38741543
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||||| ||||||||||||||||||||||||| | |||||||    
T  38741587 gggggcaattctgaagaatctttattttacaaggatgaaatctaa 38741543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 8928870 - 8928815
Alignment:
Q  80 acaggggataaaatcaaaagtgccctatattacagggggtaaaagtctattaaccc 135  Q
    |||||||  ||||||||||||||| ||||||||||||||||||   ||||||||||    
T  8928870 acagggggcaaaatcaaaagtgccttatattacagggggtaaagacctattaaccc 8928815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 461 - 516
Target Start/End: Complemental strand, 15190939 - 15190884
Alignment:
Q  461 ctatatcaccgctatttgacaacactttgtactaaataatgtgtcgtggaacaata 516  Q
    ||||| |||||||||||||||||| |||||||| |||| ||| |||| ||||||||    
T  15190939 ctatagcaccgctatttgacaacattttgtactgaatagtgtatcgtagaacaata 15190884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 16786150 - 16786205
Alignment:
Q  80 acaggggataaaatcaaaagtgccctatattaca-gggggtaaaagtctattaacc 134  Q
    ||||||| |||||||||||||| ||||||||||| |||||||||  ||||||||||    
T  16786150 acagggggtaaaatcaaaagtgacctatattacatgggggtaaagctctattaacc 16786205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 47145193 - 47145146
Alignment:
Q  89 aaaatcaaaagtgccctatattacag-ggggtaaaagtctattaaccc 135  Q
    ||||||||||||| |||||||||||| |||||||| ||||||||||||    
T  47145193 aaaatcaaaagtgacctatattacaggggggtaaaggtctattaaccc 47145146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 49201387 - 49201442
Alignment:
Q  80 acaggggataaaatcaaaagtgccctatattacagggggtaaaagtctattaaccc 135  Q
    |||||||  |||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  49201387 acaggggggaaaaccaaaagtgacctatattgcagggggtaaaagcctattaaccc 49201442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 2274607 - 2274649
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatct 64  Q
    |||| ||||| ||||||||||| ||||||||||||||||||||    
T  2274607 ggggacaatcgtgaagaatcttcattttacaaggacggaatct 2274649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 471 - 533
Target Start/End: Complemental strand, 3335206 - 3335144
Alignment:
Q  471 gctatttgacaacactttgtactaaataatgtgtcgtggaacaatactgttttgttcagattc 533  Q
    |||||||||||||||||| ||||||| |  |||||| ||||||||| || |||||||| ||||    
T  3335206 gctatttgacaacactttatactaaacagggtgtcgcggaacaatagtgatttgttcaaattc 3335144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 469 - 515
Target Start/End: Original strand, 12913236 - 12913282
Alignment:
Q  469 ccgctatttgacaacactttgtactaaataatgtgtcgtggaacaat 515  Q
    ||||||||||||||||||| |||| ||||| ||| ||||||||||||    
T  12913236 ccgctatttgacaacacttggtacaaaatagtgtatcgtggaacaat 12913282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 135
Target Start/End: Original strand, 13903382 - 13903428
Alignment:
Q  89 aaaatcaaaagtgccctatattacagggggtaaaagtctattaaccc 135  Q
    |||| |||||||| ||||||||||||||||||||  |||||||||||    
T  13903382 aaaaccaaaagtgacctatattacagggggtaaagatctattaaccc 13903428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 24545503 - 24545457
Alignment:
Q  89 aaaatcaaaagtgccctatattacagggggtaaaagtctattaaccc 135  Q
    |||| |||||||| ||||||||| |||||||||||| ||||||||||    
T  24545503 aaaaccaaaagtgacctatattatagggggtaaaagcctattaaccc 24545457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 135
Target Start/End: Original strand, 24963014 - 24963060
Alignment:
Q  89 aaaatcaaaagtgccctatattacagggggtaaaagtctattaaccc 135  Q
    |||||||||| |  |||||||||||||||||||||| ||||||||||    
T  24963014 aaaatcaaaaataacctatattacagggggtaaaagcctattaaccc 24963060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 31648588 - 31648642
Alignment:
Q  80 acaggggataaaatcaaaagtgccctatattacagggggtaaaagtctattaacc 134  Q
    |||||||| |||| ||||| |  |||||||||||||||||||| |||||||||||    
T  31648588 acaggggacaaaaccaaaaataacctatattacagggggtaaaggtctattaacc 31648642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 33645060 - 33645014
Alignment:
Q  89 aaaatcaaaagtgccctatattacagggggtaaaagtctattaaccc 135  Q
    ||||||||||||| ||||||||||||||||||||  |||| ||||||    
T  33645060 aaaatcaaaagtgacctatattacagggggtaaagatctaataaccc 33645014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 43635881 - 43635835
Alignment:
Q  89 aaaatcaaaagtgccctatattacagggggtaaaagtctattaaccc 135  Q
    |||| |||||||||||||||||||||||||||||   ||||||||||    
T  43635881 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 43635835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 44311254 - 44311208
Alignment:
Q  89 aaaatcaaaagtgccctatattacagggggtaaaagtctattaaccc 135  Q
    |||| |||||||| |||||||||||||||||||| | ||||||||||    
T  44311254 aaaagcaaaagtgtcctatattacagggggtaaaggcctattaaccc 44311208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 40246322 - 40246277
Alignment:
Q  90 aaatcaaaagtgccctatattacagggggtaaaagtctattaaccc 135  Q
    |||||||||||||  |||||||||||||||||| | ||||||||||    
T  40246322 aaatcaaaagtgcgttatattacagggggtaaatgcctattaaccc 40246277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 8984909 - 8984853
Alignment:
Q  80 acaggggataaaatcaaaagtgccctatattaca-gggggtaaaagtctattaaccc 135  Q
    |||||||  ||||||||||||| ||||||||||| |||| ||||| |||||||||||    
T  8984909 acagggggcaaaatcaaaagtggcctatattacatggggctaaaactctattaaccc 8984853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 516
Target Start/End: Complemental strand, 11613140 - 11613060
Alignment:
Q  436 gttcaaattccactacactacagttctatatcaccgctatttgacaacactttgtactaaataatgtgtcgtggaacaata 516  Q
    ||||||||||||||||  ||||||  ||   |||||||||| ||||||||||||||||| | || || |||||| ||||||    
T  11613140 gttcaaattccactacggtacagtgttactgcaccgctattggacaacactttgtactagaaaaggtatcgtgggacaata 11613060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 469 - 541
Target Start/End: Original strand, 43391532 - 43391604
Alignment:
Q  469 ccgctatttgacaacactttgtactaaataatgtgtcgtggaacaatactgttttgttcagattctgctatgc 541  Q
    |||| ||||||||||| ||||||||||||| ||  ||| |||||||||  | |||||||| ||||||| ||||    
T  43391532 ccgccatttgacaacattttgtactaaatagtgcatcggggaacaatagcgatttgttcaaattctgccatgc 43391604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 43635945 - 43635901
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||| ||||| ||||||||||| |||||||||||||| |||||||    
T  43635945 ggggtcaatcgtgaagaatcttcattttacaaggacgaaatctaa 43635901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 45; Significance: 2e-16; HSPs: 3)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 11513 - 11557
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  11513 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 11557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 95 - 135
Target Start/End: Complemental strand, 10120 - 10080
Alignment:
Q  95 aaaagtgccctatattacagggggtaaaagtctattaaccc 135  Q
    ||||||||||||||||||||||||||||   ||||||||||    
T  10120 aaaagtgccctatattacagggggtaaagacctattaaccc 10080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 10192 - 10148
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||  ||||||||||| ||||||||||||| ||||||||    
T  10192 gggggcaattgtgaagaatcttcattttacaaggactgaatctaa 10148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 37336 - 37380
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  37336 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 37380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 30839 - 30793
Alignment:
Q  20 cggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||    
T  30839 cggggggaaatactgaagaatctttattttacaaggacggaatctaa 30793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 2e-16; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 22 - 122
Target Start/End: Complemental strand, 21994437 - 21994340
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaannnnnnnnnnnnnacaggggataaaatcaaaagtgccctatattacagggggtaa 121  Q
    |||||||||||| ||||||||||||||||||||||||||||||||             |||||||| ||||||||||||| |||||||||||||||||||    
T  21994437 gggggcaatcctaaagaatctttattttacaaggacggaatctaa---aaaaaaaattacaggggacaaaatcaaaagtgtcctatattacagggggtaa 21994341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 43537563 - 43537519
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  43537563 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 43537519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 51754144 - 51754187
Alignment:
Q  23 ggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  51754144 ggggcaatcctgaagaatctttattttacaaggacggaatctaa 51754187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 29248362 - 29248310
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||| |||||||||| ||||||||||| ||||||||||||||||||||||    
T  29248362 agggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 29248310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 29249646 - 29249698
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||| |||||||||| |||||||||||||||||||||||||| |||||||    
T  29249646 agggctcagggggcaatcttgaagaatctttattttacaaggacgaaatctaa 29249698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 34740009 - 34739957
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||| |||||||||| ||||||||||| ||||||||||||||||||||||    
T  34740009 agggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 34739957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 34741330 - 34741382
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||| |||||||||| ||||||||||| ||||||||||||||||||||||    
T  34741330 agggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 34741382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 54555283 - 54555338
Alignment:
Q  11 caaagggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||  |||||||    
T  54555283 caaagggctcgaggggcaatcgtgaagaatctttattttacaaggacataatctaa 54555338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 43537776 - 43537826
Alignment:
Q  16 ggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||| ||||||||||||||||||| ||||||||| |||||||||||||||    
T  43537776 ggctcagggggcaatcctgaagaatttttattttagaaggacggaatctaa 43537826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 50880026 - 50879976
Alignment:
Q  16 ggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||| ||||||||||||||| |||||||||||||| ||||||||||||||    
T  50880026 ggctcagggggcaatcctgaaaaatctttattttaccaggacggaatctaa 50879976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 14 - 135
Target Start/End: Complemental strand, 20962314 - 20962194
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaannnnnnnnnnnnnacaggggataaaatcaaaagtgccctatattaca 113  Q
    ||||||| || ||||||| ||||||||||| ||||||||||||||||||||||             |||||||  |||| |||||||||| |||||||||    
T  20962314 agggctcaggaggcaatcttgaagaatcttcattttacaaggacggaatctaa-aaaaaaatttttacagggggcaaaaccaaaagtgccatatattaca 20962216  T
Q  114 gggggtaaaagtctattaaccc 135  Q
    |||||||||  |||||||||||    
T  20962215 gggggtaaagatctattaaccc 20962194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 2438360 - 2438320
Alignment:
Q  26 gcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  2438360 gcaatcctgaagaatctttattttacaaggatggaatctaa 2438320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 12566875 - 12566927
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||| |||||||||| ||||||||||| ||||||||||||| ||||||||    
T  12566875 agggctcagggggcaatcttgaagaatcttcattttacaaggacagaatctaa 12566927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 20963636 - 20963688
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||| |||| ||||| ||||||||||| ||||||||||||||||||||||    
T  20963636 agggctcaggggacaatcttgaagaatcttcattttacaaggacggaatctaa 20963688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 51752794 - 51752751
Alignment:
Q  23 ggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||    
T  51752794 ggggcaatcgtgaagaatcttcattttacaaggacggaatctaa 51752751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 453 - 543
Target Start/End: Complemental strand, 28139999 - 28139909
Alignment:
Q  453 ctacagttctatatcaccgctatttgacaacactttgtactaaataatgtgtcgtggaacaatactgttttgttcagattctgctatgcca 543  Q
    ||||||| ||||| | |||||||| ||||||||| ||||||||||||||| | | ||||||||| || |||||| | |||| |||| ||||    
T  28139999 ctacagtgctatagcgccgctattcgacaacactatgtactaaataatgtattgcggaacaataatgatttgttgaaattccgctacgcca 28139909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 37421848 - 37421890
Alignment:
Q  24 gggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||||||||| ||||||||||||||||||| |||||||||    
T  37421848 gggcaatcctgaataatctttattttacaaggatggaatctaa 37421890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 46426211 - 46426169
Alignment:
Q  24 gggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||  ||||||||||||||||||||||||||||||||||    
T  46426211 gggcaattttgaagaatctttattttacaaggacggaatctaa 46426169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 66
Target Start/End: Complemental strand, 49629739 - 49629701
Alignment:
Q  28 aatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  49629739 aatcctgaagaatctttattttaccaggacggaatctaa 49629701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 9410225 - 9410269
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||||| ||||||||||||||||||||||||| | |||||||    
T  9410225 gggggcaatactgaagaatctttattttacaaggatgaaatctaa 9410269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 9410284 - 9410340
Alignment:
Q  80 acaggggataaaatcaaaagtgccctatattacag-ggggtaaaagtctattaaccc 135  Q
    |||||||| |||| ||||||||||||||||||||| |||||||||  ||||||||||    
T  9410284 acaggggacaaaaccaaaagtgccctatattacagaggggtaaaacactattaaccc 9410340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 469 - 516
Target Start/End: Complemental strand, 32657607 - 32657562
Alignment:
Q  469 ccgctatttgacaacactttgtactaaataatgtgtcgtggaacaata 516  Q
    ||||||||||||||||||  |||||||||||||| |||||||||||||    
T  32657607 ccgctatttgacaacact--gtactaaataatgtatcgtggaacaata 32657562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 37600911 - 37600875
Alignment:
Q  27 caatcctgaagaatctttattttacaaggacggaatc 63  Q
    ||||||| |||||||||||||||||||||||||||||    
T  37600911 caatcctaaagaatctttattttacaaggacggaatc 37600875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 40479461 - 40479501
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaat 62  Q
    |||||||||| ||||||||||| ||||||||||||||||||    
T  40479461 gggggcaatcgtgaagaatcttcattttacaaggacggaat 40479501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 55499363 - 55499319
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||| |||| |||||| ||||||||||||||||||||||    
T  55499363 gggggcaatcgtgaaaaatcttcattttacaaggacggaatctaa 55499319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 34027196 - 34027251
Alignment:
Q  80 acaggggataaaatcaaaagtgccctatattacagggggtaaaagtctattaaccc 135  Q
    |||||||  |||| |||||||| |||||||||||||||||||| | ||||||||||    
T  34027196 acagggggcaaaaccaaaagtgacctatattacagggggtaaaggcctattaaccc 34027251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 46427183 - 46427230
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaa 61  Q
    ||||||| |||||||||| ||| |||||||||||||| ||||||||||    
T  46427183 agggctcagggggcaatcttgatgaatctttattttataaggacggaa 46427230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 50881369 - 50881412
Alignment:
Q  23 ggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||    
T  50881369 ggggcaatcgtgaagaatcttcattttacaatgacggaatctaa 50881412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 51754202 - 51754257
Alignment:
Q  80 acaggggataaaatcaaaagtgccctatattacagggggtaaaagtctattaaccc 135  Q
    ||||| || |||| ||||||| |||||||||||||||||||||  |||||||||||    
T  51754202 acaggtgacaaaaccaaaagtaccctatattacagggggtaaagctctattaaccc 51754257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 54554438 - 54554383
Alignment:
Q  80 acaggggataaaatcaaaagtgccctatattacagggggtaaaagtctattaaccc 135  Q
    |||||||  |||| |||||||||||||||||||||||||||||   ||||||||||    
T  54554438 acagggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 54554383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 14183657 - 14183611
Alignment:
Q  89 aaaatcaaaagtgccctatattacagggggtaaaagtctattaaccc 135  Q
    |||| |||||||||||||||||| |||||||||||  ||||||||||    
T  14183657 aaaaccaaaagtgccctatattagagggggtaaaacactattaaccc 14183611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 15694571 - 15694529
Alignment:
Q  24 gggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||||||||||||| ||||||| ||||| ||||||||    
T  15694571 gggcaatcctgaagaatcttcattttacgaggaccgaatctaa 15694529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 32 - 66
Target Start/End: Complemental strand, 52264546 - 52264512
Alignment:
Q  32 ctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||||| ||||||||||||||||||||||    
T  52264546 ctgaagaatcttgattttacaaggacggaatctaa 52264512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 49629687 - 49629635
Alignment:
Q  82 aggggataaaatcaaaagtgccctatattacagggggtaaaagtctattaaccc 135  Q
    |||||| |||| |||||||| ||||| |||||||||||||| ||||||||||||    
T  49629687 aggggacaaaaccaaaagtgtcctat-ttacagggggtaaaggtctattaaccc 49629635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 469 - 497
Target Start/End: Complemental strand, 4148471 - 4148443
Alignment:
Q  469 ccgctatttgacaacactttgtactaaat 497  Q
    |||||||||||||||||||||||||||||    
T  4148471 ccgctatttgacaacactttgtactaaat 4148443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 9410112 - 9410076
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacg 58  Q
    ||||||||| ||||||||| |||||||||||||||||    
T  9410112 gggggcaatactgaagaatatttattttacaaggacg 9410076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 89 - 133
Target Start/End: Original strand, 12352470 - 12352514
Alignment:
Q  89 aaaatcaaaagtgccctatattacagggggtaaaagtctattaac 133  Q
    |||| |||||||| |||||||||||||||||||| | ||||||||    
T  12352470 aaaaccaaaagtgacctatattacagggggtaaaggcctattaac 12352514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 15695121 - 15695165
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||| ||||||||||||||||| ||||||| |||||| |||||||    
T  15695121 ggggacaatcctgaagaatcttcattttacgaggacgaaatctaa 15695165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 469 - 505
Target Start/End: Complemental strand, 20989555 - 20989519
Alignment:
Q  469 ccgctatttgacaacactttgtactaaataatgtgtc 505  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  20989555 ccgctatttgacaacattttgtactaaatagtgtgtc 20989519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 49630546 - 49630586
Alignment:
Q  26 gcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||| |||| |||||| ||||||||||||||||||||||    
T  49630546 gcaatcgtgaaaaatcttcattttacaaggacggaatctaa 49630586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 55500349 - 55500393
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||| ||||||||||| |||||||| ||| |||||||||    
T  55500349 gggggcaatcgtgaagaatcttcattttacagggatggaatctaa 55500393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 2e-16; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 21904045 - 21903993
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  21904045 agggctcagggggcaatcttgaagaatctttattttacaaggacggaatctaa 21903993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 38876110 - 38876058
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  38876110 agggctcagggggcaatcttgaagaatctttattttacaaggacggaatctaa 38876058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 38876958 - 38877010
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  38876958 agggctcagggggcaatcttgaagaatctttattttacaaggacggaatctaa 38877010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 18416611 - 18416662
Alignment:
Q  15 gggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  18416611 gggctcggggggcaatcctaaagaatctttattttacgaggacggaatctaa 18416662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 22293478 - 22293533
Alignment:
Q  11 caaagggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||    
T  22293478 caaagggcttggggggcaatactgaagaatctttattttacaaggaccgaatctaa 22293533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 36565347 - 36565304
Alignment:
Q  23 ggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  36565347 ggggcaatcctgaagaatctttattttacaaggacggaatctaa 36565304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 1903051 - 1902999
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||| |||||||||| ||||||||||| ||||||||||||||||||||||    
T  1903051 agggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 1902999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 1904345 - 1904397
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||| |||||||||| ||||||||||| ||||||||||||||||||||||    
T  1904345 agggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 1904397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 38815030 - 38815082
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||| |||||||||| ||||||||||| ||||||||||||||||||||||    
T  38815030 agggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 38815082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 38936064 - 38936012
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||| |||||||||| ||||||||||| ||||||||||||||||||||||    
T  38936064 agggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 38936012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 38937050 - 38936998
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||| |||||||||| ||||||||||| ||||||||||||||||||||||    
T  38937050 agggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 38936998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 38937445 - 38937497
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||| |||||||||| ||||||||||| ||||||||||||||||||||||    
T  38937445 agggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 38937497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 41307081 - 41307136
Alignment:
Q  11 caaagggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||||||||||||||||| |||||||| |||||||||||| |||| |||||||    
T  41307081 caaagggctcggggggcaatcttgaagaatatttattttacaaagacgaaatctaa 41307136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 44366985 - 44366936
Alignment:
Q  17 gctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||| |||||||||| ||||||||||| ||||||||||||||||||||||    
T  44366985 gctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 44366936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 10355120 - 10355076
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||| |||||||||||||||||||||| |||||||||||||||||    
T  10355120 ggggacaatcctgaagaatctttatttgacaaggacggaatctaa 10355076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 7576437 - 7576394
Alignment:
Q  23 ggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||    
T  7576437 ggggcaatcttgaagaatcttcattttacaaggacggaatctaa 7576394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 15747806 - 15747751
Alignment:
Q  80 acaggggataaaatcaaaagtgccctatattacagggggtaaaagtctattaaccc 135  Q
    |||||| | |||| |||||||| |||||||||||||||||||| ||||||||||||    
T  15747806 acagggaacaaaaccaaaagtgacctatattacagggggtaaaggtctattaaccc 15747751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 39151251 - 39151306
Alignment:
Q  11 caaagggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||  || |||||| |||||||||||||||||||||||||| ||||||||    
T  39151251 caaagggcttaggaggcaattctgaagaatctttattttacaaggacagaatctaa 39151306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 118
Target Start/End: Original strand, 7577715 - 7577816
Alignment:
Q  16 ggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaannnnnnnnnnnnnacaggggataaaatcaaaagtgccctatattacagg 115  Q
    ||||| |||||||||| ||| ||||||| ||||||||||||||||||||||             ||||||| ||||| ||||||||||||||||||||||    
T  7577715 ggctcagggggcaatcttgatgaatcttcattttacaaggacggaatctaaaaaaaaaaattt-acagggggtaaaaccaaaagtgccctatattacagg 7577813  T
Q  116 ggg 118  Q
    |||    
T  7577814 ggg 7577816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 11101211 - 11101163
Alignment:
Q  17 gctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||| |||||||||| ||||||||||||||||| ||||||||||||||||    
T  11101211 gctcagggggcaatcttgaagaatctttatttt-caaggacggaatctaa 11101163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 28756488 - 28756533
Alignment:
Q  13 aagggctcggggggcaatcctgaagaatctttattttacaaggacg 58  Q
    ||||| ||| ||||||||||||||||||||||||||||| ||||||    
T  28756488 aagggttcgtggggcaatcctgaagaatctttattttacgaggacg 28756533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 5969841 - 5969797
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||| ||||| | ||||||||||||||||||||||||||||||||    
T  5969841 ggggacaatcattaagaatctttattttacaaggacggaatctaa 5969797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 10355265 - 10355301
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacg 58  Q
    |||| ||||||||||||||||||||||||||||||||    
T  10355265 ggggacaatcctgaagaatctttattttacaaggacg 10355301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 16670611 - 16670567
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||| ||||||||||| ||||||||| ||||||||||||    
T  16670611 gggggcaatcgtgaagaatcttcattttacaatgacggaatctaa 16670567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 18249743 - 18249699
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||| ||||||||||| ||||||||||||| ||||||||    
T  18249743 gggggcaatcgtgaagaatcttcattttacaaggacagaatctaa 18249699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 23834693 - 23834649
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||| ||||| ||||||||||| ||||||||||||||||||||||    
T  23834693 ggggacaatcgtgaagaatcttcattttacaaggacggaatctaa 23834649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 38813688 - 38813644
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||| |||||||| || ||||||||||||||||||||||    
T  38813688 gggggcaatcttgaagaatattcattttacaaggacggaatctaa 38813644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 41305994 - 41305950
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||| ||||||| ||| ||||||||||||||||||||||    
T  41305994 gggggcaatcgtgaagaagcttcattttacaaggacggaatctaa 41305950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 44368329 - 44368373
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||| ||||||||||| ||| ||||||||||||||||||    
T  44368329 gggggcaatcgtgaagaatcttcattatacaaggacggaatctaa 44368373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 66
Target Start/End: Original strand, 11102115 - 11102154
Alignment:
Q  27 caatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  11102115 caatcttgaagaatctttattttaaaaggacggaatctaa 11102154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 65
Target Start/End: Original strand, 16671748 - 16671791
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatcta 65  Q
    |||||||||| ||||||||||| |||||||||| ||||||||||    
T  16671748 gggggcaatcgtgaagaatcttcattttacaagaacggaatcta 16671791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 66
Target Start/End: Original strand, 18250839 - 18250878
Alignment:
Q  27 caatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  18250839 caatcgtgaagaatcttcattttacaaggacggaatctaa 18250878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 80 - 122
Target Start/End: Complemental strand, 16670554 - 16670512
Alignment:
Q  80 acaggggataaaatcaaaagtgccctatattacagggggtaaa 122  Q
    |||||||  |||| |||||||||||||||||||||||||||||    
T  16670554 acagggggcaaaaccaaaagtgccctatattacagggggtaaa 16670512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 135
Target Start/End: Original strand, 19686190 - 19686236
Alignment:
Q  89 aaaatcaaaagtgccctatattacagggggtaaaagtctattaaccc 135  Q
    |||| |||||||||||||||||||||||||||||   ||||||||||    
T  19686190 aaaaccaaaagtgccctatattacagggggtaaagcactattaaccc 19686236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 135
Target Start/End: Original strand, 38937519 - 38937565
Alignment:
Q  89 aaaatcaaaagtgccctatattacagggggtaaaagtctattaaccc 135  Q
    |||| |||||||||||||||||||||||||||||   ||||||||||    
T  38937519 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 38937565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 66
Target Start/End: Complemental strand, 8238088 - 8238055
Alignment:
Q  33 tgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||||||||||||||||||||| ||||||||    
T  8238088 tgaagaatctttattttacaaggaccgaatctaa 8238055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 134
Target Start/End: Original strand, 34404601 - 34404646
Alignment:
Q  89 aaaatcaaaagtgccctatattacagggggtaaaagtctattaacc 134  Q
    |||| |||||||| | |||||||||||||||||||| |||||||||    
T  34404601 aaaaccaaaagtgacatatattacagggggtaaaagcctattaacc 34404646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 134
Target Start/End: Complemental strand, 39227135 - 39227090
Alignment:
Q  89 aaaatcaaaagtgccctatattacagggggtaaaagtctattaacc 134  Q
    |||||| ||| || ||||||||||||||| ||||||||||||||||    
T  39227135 aaaatcgaaaatgacctatattacaggggataaaagtctattaacc 39227090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 471 - 516
Target Start/End: Original strand, 44458228 - 44458273
Alignment:
Q  471 gctatttgacaacactttgtactaaataatgtgtcgtggaacaata 516  Q
    |||||||||||| ||||||||||||||| ||| ||| |||||||||    
T  44458228 gctatttgacaatactttgtactaaatattgtatcgcggaacaata 44458273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 5970701 - 5970745
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||| ||||| ||||||||||| |||||||||| |||||||||||    
T  5970701 ggggacaatcgtgaagaatcttcattttacaagaacggaatctaa 5970745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 12301070 - 12301114
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||| ||||||||||||||||||||||| |||||  |||||||||    
T  12301070 ggggtcaatcctgaagaatctttatttttcaagggtggaatctaa 12301114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 22292591 - 22292547
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||| ||||||||||| |||||||||||||  |||||||    
T  22292591 gggggcaatcgtgaagaatcttcattttacaaggacaaaatctaa 22292547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 95 - 135
Target Start/End: Original strand, 23835789 - 23835829
Alignment:
Q  95 aaaagtgccctatattacagggggtaaaagtctattaaccc 135  Q
    ||||||||||||||||||||||||||||   ||||||||||    
T  23835789 aaaagtgccctatattacagggggtaaagacctattaaccc 23835829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 468 - 516
Target Start/End: Complemental strand, 24097814 - 24097766
Alignment:
Q  468 accgctatttgacaacactttgtactaaataatgtgtcgtggaacaata 516  Q
    ||||||||||||||||| |||||||||||||  || ||||||| |||||    
T  24097814 accgctatttgacaacattttgtactaaataccgtatcgtggaccaata 24097766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 28141735 - 28141691
Alignment:
Q  88 taaaatcaaaagtgccctatattacagggggtaaaagtctattaa 132  Q
    ||||| |||||||| ||||||||||||||||||||  ||||||||    
T  28141735 taaaaccaaaagtgacctatattacagggggtaaagatctattaa 28141691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 8995 - 9036
Alignment:
Q  25 ggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  8995 ggcaatcctgaagaatctttattttacaaggacggaatctaa 9036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 56057 - 56169
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaannnnnnnnnnnnnacaggggataaaatcaaaagtgccctatattacagggggtaa 121  Q
    |||||||||| ||||||||||| ||||||||| ||||||||||||             |||||||| |||||||||||||||||||||||||||||||||    
T  56057 gggggcaatcgtgaagaatcttcattttacaacgacggaatctaaaaaaaaaaaatt-acaggggacaaaatcaaaagtgccctatattacagggggtaa 56155  T
Q  122 aagtctattaaccc 135  Q
    |   ||||||||||    
T  56156 agacctattaaccc 56169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 24234450 - 24234398
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||| |||||||||| ||||||||||| ||||||||||||||||||||||    
T  24234450 agggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 24234398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 33485020 - 33485060
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaat 62  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  33485020 gggggcaatcctgaagaatctttattttacaaggacggaat 33485060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 6000615 - 6000657
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatct 64  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  6000615 gggggcaatcctgaagaatctttattttacaaggatggaatct 6000657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 22056600 - 22056551
Alignment:
Q  17 gctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||| |||||||||| ||||||||||| ||||||||||||||||||||||    
T  22056600 gctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 22056551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 12322748 - 12322842
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaannnnnnnnnnnnnacaggggataaaatcaaaagtgccctatattacaggggg 118  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||             |||||||  ||||||||||||||||||||||||||||||    
T  12322748 gggggcaatcgtgaagaatcttcattttacaaggacggaatctaaaaaaaaaaatt--acagggggcaaaatcaaaagtgccctatattacaggggg 12322842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 22058215 - 22058267
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||  ||||||||| ||||||||||| ||||||||||||||||||||||    
T  22058215 agggctcaaggggcaatcttgaagaatcttcattttacaaggacggaatctaa 22058267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 24235567 - 24235619
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||| |||||||||| ||||||||||| ||||||||||||| ||||||||    
T  24235567 agggctcagggggcaatcttgaagaatcttcattttacaaggacagaatctaa 24235619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 24914551 - 24914507
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||    
T  24914551 gggggcaatcttgaagaatcttcattttacaaggacggaatctaa 24914507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 33 - 66
Target Start/End: Complemental strand, 6759106 - 6759073
Alignment:
Q  33 tgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||||||||||||||||||||||||||||||    
T  6759106 tgaagaatctttattttacaaggacggaatctaa 6759073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 472 - 541
Target Start/End: Original strand, 13427711 - 13427780
Alignment:
Q  472 ctatttgacaacactttgtactaaataatgtgtcgtggaacaatactgttttgttcagattctgctatgc 541  Q
    |||||| |||| | |||||||||||||||||||| ||||||||||  | |||||| | ||||||||||||    
T  13427711 ctatttcacaatattttgtactaaataatgtgtcatggaacaatagcgatttgttgaaattctgctatgc 13427780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 54918 - 54874
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||| |||| |||||| ||||||||||||||||||||||    
T  54918 gggggcaatcgtgaataatcttcattttacaaggacggaatctaa 54874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 11424870 - 11424830
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaat 62  Q
    |||| |||||||||||||||||||||||||||||| |||||    
T  11424870 ggggacaatcctgaagaatctttattttacaaggatggaat 11424830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 472 - 540
Target Start/End: Complemental strand, 34881773 - 34881705
Alignment:
Q  472 ctatttgacaacactttgtactaaataatgtgtcgtggaacaatactgttttgttcagattctgctatg 540  Q
    ||||||||||| |||||||||||||||  || ||||||||| ||| || |||||||| |||| ||||||    
T  34881773 ctatttgacaagactttgtactaaatagcgtatcgtggaacgatagtgatttgttcatattccgctatg 34881705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 3119375 - 3119320
Alignment:
Q  80 acaggggataaaatcaaaagtgccctatattacagggggtaaaagtctattaaccc 135  Q
    |||||||| |||| ||||||||  ||||||| |||||| |||||||||||||||||    
T  3119375 acaggggagaaaaccaaaagtgatctatattgcaggggataaaagtctattaaccc 3119320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 473 - 516
Target Start/End: Complemental strand, 5048551 - 5048508
Alignment:
Q  473 tatttgacaacactttgtactaaataatgtgtcgtggaacaata 516  Q
    |||||||||||||||||||||||||||| |||  ||||||||||    
T  5048551 tatttgacaacactttgtactaaataatttgttatggaacaata 5048508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 471 - 538
Target Start/End: Complemental strand, 21869924 - 21869857
Alignment:
Q  471 gctatttgacaacactttgtactaaataatgtgtcgtggaacaatactgttttgttcagattctgcta 538  Q
    |||||||||||||| ||||||||||||| ||| ||  ||||||||| || |||||||  |||||||||    
T  21869924 gctatttgacaacattttgtactaaatagtgtatcacggaacaataatgatttgttcgaattctgcta 21869857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 28583602 - 28583547
Alignment:
Q  80 acaggggataaaatcaaaagtgccctatattacagggggtaaaagtctattaaccc 135  Q
    |||||||  |||| |||||||||||||||||||| |||||||||  ||||||||||    
T  28583602 acaggggcaaaaaccaaaagtgccctatattacacggggtaaaacactattaaccc 28583547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 17 - 51
Target Start/End: Complemental strand, 5999827 - 5999793
Alignment:
Q  17 gctcggggggcaatcctgaagaatctttattttac 51  Q
    |||| ||||||||||||||||||||||||||||||    
T  5999827 gctcagggggcaatcctgaagaatctttattttac 5999793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 135
Target Start/End: Original strand, 6000682 - 6000728
Alignment:
Q  89 aaaatcaaaagtgccctatattacagggggtaaaagtctattaaccc 135  Q
    |||| ||||||||| |||||||||||||||||||  |||||||||||    
T  6000682 aaaaccaaaagtgctctatattacagggggtaaagctctattaaccc 6000728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 539
Target Start/End: Original strand, 9742522 - 9742580
Alignment:
Q  481 aacactttgtactaaataatgtgtcgtggaacaatactgttttgttcagattctgctat 539  Q
    |||||||||||||||||   || ||| |||||||||||| |||||||| ||||||||||    
T  9742522 aacactttgtactaaatggcgtatcgcggaacaatactgatttgttcaaattctgctat 9742580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 23 - 65
Target Start/End: Complemental strand, 12321674 - 12321632
Alignment:
Q  23 ggggcaatcctgaagaatctttattttacaaggacggaatcta 65  Q
    ||||||||| ||||||||||| |||||||||||||| ||||||    
T  12321674 ggggcaatcgtgaagaatcttcattttacaaggacgaaatcta 12321632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 32 - 66
Target Start/End: Complemental strand, 21939223 - 21939189
Alignment:
Q  32 ctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||||||| |||||||||||||||||||||||    
T  21939223 ctgaagaatctatattttacaaggacggaatctaa 21939189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 36 - 66
Target Start/End: Original strand, 22253235 - 22253265
Alignment:
Q  36 agaatctttattttacaaggacggaatctaa 66  Q
    |||||||||||||||||||||||||||||||    
T  22253235 agaatctttattttacaaggacggaatctaa 22253265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 32614226 - 32614172
Alignment:
Q  81 caggggataaaatcaaaagtgccctatattacagggggtaaaagtctattaaccc 135  Q
    ||||||| |||||| |||||| |||||||||||| ||||||| | ||||||||||    
T  32614226 caggggacaaaatcgaaagtggcctatattacagagggtaaaggcctattaaccc 32614172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 470 - 498
Target Start/End: Original strand, 9053920 - 9053948
Alignment:
Q  470 cgctatttgacaacactttgtactaaata 498  Q
    |||||||||||||||||||||||||||||    
T  9053920 cgctatttgacaacactttgtactaaata 9053948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 103 - 135
Target Start/End: Complemental strand, 9234847 - 9234815
Alignment:
Q  103 cctatattacagggggtaaaagtctattaaccc 135  Q
    ||||||||||||||||||||| |||||||||||    
T  9234847 cctatattacagggggtaaaactctattaaccc 9234815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 95 - 135
Target Start/End: Original strand, 11425785 - 11425825
Alignment:
Q  95 aaaagtgccctatattacagggggtaaaagtctattaaccc 135  Q
    ||||||||||||||||||||||| |||||  ||||||||||    
T  11425785 aaaagtgccctatattacaggggataaaacactattaaccc 11425825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 24882 - 24922
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaat 62  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  24882 gggggcaatcctgaagaatctttattttacaaggacggaat 24922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 64615 - 64571
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  64615 gggggcaatcctgaagaatctttattttacaaggacgaaatctaa 64571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 65987 - 66031
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||    
T  65987 gggggcaatcgtgaagaatcttcattttacaaggacggaatctaa 66031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 6105668 - 6105624
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  6105668 gggggcaatcctgaagaatctttattttacaagtacggaatctaa 6105624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 27163237 - 27163185
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||| |||||||||| ||||||||||| ||||||||||||||||||||||    
T  27163237 agggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 27163185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 14 - 122
Target Start/End: Original strand, 27164595 - 27164702
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaannnnnnnnnnnnnacaggggataaaatcaaaagtgccctatattaca 113  Q
    ||||||| |||||||||| ||||||||||| ||||||||||||||||||||||             |||||||  |||| ||||||||||||||||||||    
T  27164595 agggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaatttt-acagggggcaaaaccaaaagtgccctatattaca 27164693  T
Q  114 gggggtaaa 122  Q
    |||||||||    
T  27164694 gggggtaaa 27164702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 39810023 - 39810075
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||| |||||||||| ||||||||||| ||||||||||||||||||||||    
T  39810023 agggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 39810075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 455 - 514
Target Start/End: Complemental strand, 16950332 - 16950273
Alignment:
Q  455 acagttctatatcaccgctatttgacaacactttgtactaaataatgtgtcgtggaacaa 514  Q
    ||||||||||  ||| |||||||||||||| ||||||||||||||||| |||||||||||    
T  16950332 acagttctatggcactgctatttgacaacattttgtactaaataatgtatcgtggaacaa 16950273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 1601198 - 1601242
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||    
T  1601198 gggggcaatcgtgaagaatcttcattttacaaggacggaatctaa 1601242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 3252275 - 3252231
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||| |||||||||||||||||| |||||||||||||||    
T  3252275 gggggcaatcgtgaagaatctttattttataaggacggaatctaa 3252231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 5704467 - 5704519
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||| ||||| |||| |||||||||||||||||||||||||| |||||||    
T  5704467 agggctcagggggtaatcttgaagaatctttattttacaaggacgaaatctaa 5704519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 28574651 - 28574607
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||| |||||||||||||||||| |||||||||||||||    
T  28574651 gggggcaatcttgaagaatctttattttaaaaggacggaatctaa 28574607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 39808768 - 39808716
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||| |||||||||| ||||||||||| ||||||||||||| ||||||||    
T  39808768 agggctcagggggcaatcttgaagaatcttcattttacaaggacagaatctaa 39808716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 27 - 66
Target Start/End: Original strand, 28561969 - 28562008
Alignment:
Q  27 caatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  28561969 caatcttgaagaatctttattttacaaggacggaatctaa 28562008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 27 - 66
Target Start/End: Original strand, 28567467 - 28567506
Alignment:
Q  27 caatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  28567467 caatcttgaagaatctttattttacaaggacggaatctaa 28567506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 39913880 - 39913923
Alignment:
Q  23 ggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||    
T  39913880 ggggcaatcgtgaagaatcttcattttacaaggacggaatctaa 39913923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 34901557 - 34901503
Alignment:
Q  80 acaggggataaaatcaaaagtgccctatattacagggggtaaaagtctattaacc 134  Q
    |||||||  |||| |||||||| |||||||||||||||||||||| |||||||||    
T  34901557 acagggggcaaaaccaaaagtgacctatattacagggggtaaaagcctattaacc 34901503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 42350124 - 42350166
Alignment:
Q  24 gggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||| ||||||||||| ||||||||||||||||||||||    
T  42350124 gggcaatcttgaagaatcttcattttacaaggacggaatctaa 42350166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 1600187 - 1600143
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||| ||||||||||| |||||| |||||||||||||||    
T  1600187 gggggcaatcgtgaagaatcttcattttataaggacggaatctaa 1600143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 1602843 - 1602887
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||| ||||||||||| ||| ||||||||||||||||||    
T  1602843 gggggcaatcgtgaagaatcttcattatacaaggacggaatctaa 1602887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 5703165 - 5703121
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||| ||||| |||||||||||||||||||||||||| |||||||    
T  5703165 ggggacaatcttgaagaatctttattttacaaggacgaaatctaa 5703121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 28561475 - 28561435
Alignment:
Q  94 caaaagtgccctatattacagggggtaaaagtctattaacc 134  Q
    |||||||||||||||||||||||||||||  ||||||||||    
T  28561475 caaaagtgccctatattacagggggtaaagctctattaacc 28561435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 28566973 - 28566933
Alignment:
Q  94 caaaagtgccctatattacagggggtaaaagtctattaacc 134  Q
    |||||||||||||||||||||||||||||  ||||||||||    
T  28566973 caaaagtgccctatattacagggggtaaagctctattaacc 28566933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 1601720 - 1601673
Alignment:
Q  89 aaaatcaaaagtgccctatattacag-ggggtaaaagtctattaaccc 135  Q
    |||| ||||||||||||||||||||| |||||||| ||||||||||||    
T  1601720 aaaaccaaaagtgccctatattacagaggggtaaaggtctattaaccc 1601673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 39513922 - 39513867
Alignment:
Q  80 acaggggataaaatcaaaagtgccctatattacagggggtaaaagtctattaaccc 135  Q
    |||||||  |||| |||||||| |||||||||||||||||||| | ||||||||||    
T  39513922 acagggggcaaaaccaaaagtgacctatattacagggggtaaatgcctattaaccc 39513867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 538
Target Start/End: Complemental strand, 4114819 - 4114730
Alignment:
Q  448 ctacactacagttctatatcaccgctatttgacaacactttgtactaaataatgtgtcgtggaacaatactgttttgttcagattctgcta 538  Q
    |||||| ||||| ||||| |||||||||||||||||| |||||| ||| || | | |||| |||||||| || |||||||| |||| ||||    
T  4114819 ctacacaacagtgctatagcaccgctatttgacaacattttgtagtaactact-tatcgtagaacaatagtgatttgttcaaattcggcta 4114730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 80 - 118
Target Start/End: Original strand, 9768306 - 9768344
Alignment:
Q  80 acaggggataaaatcaaaagtgccctatattacaggggg 118  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  9768306 acaggggacaaaatcaaaagtgacctatattacaggggg 9768344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 436 - 498
Target Start/End: Original strand, 18899953 - 18900015
Alignment:
Q  436 gttcaaattccactacactacagttctatatcaccgctatttgacaacactttgtactaaata 498  Q
    ||||||||||| |||||| ||||| ||||||  || ||||||||||||| |||||| ||||||    
T  18899953 gttcaaattccgctacacaacagtgctatattgcctctatttgacaacattttgtaataaata 18900015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 80 - 122
Target Start/End: Original strand, 19158169 - 19158211
Alignment:
Q  80 acaggggataaaatcaaaagtgccctatattacagggggtaaa 122  Q
    |||| |||||||||||||| || ||||||||||||||||||||    
T  19158169 acagaggataaaatcaaaaatgacctatattacagggggtaaa 19158211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 36 - 66
Target Start/End: Complemental strand, 24359062 - 24359032
Alignment:
Q  36 agaatctttattttacaaggacggaatctaa 66  Q
    |||||||||||||||||||||||||||||||    
T  24359062 agaatctttattttacaaggacggaatctaa 24359032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 28575059 - 28575101
Alignment:
Q  24 gggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||| |||||||||||||||||| ||||||| |||||||    
T  28575059 gggcaatcttgaagaatctttattttataaggacgaaatctaa 28575101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 66
Target Start/End: Original strand, 9768260 - 9768293
Alignment:
Q  33 tgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||||||| ||||||||||||||||||||||    
T  9768260 tgaagaatcttgattttacaaggacggaatctaa 9768293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 66
Target Start/End: Original strand, 21397838 - 21397871
Alignment:
Q  33 tgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||||||||||||||||||| |||||||    
T  21397838 tgaagaatctttattttacaaggacgaaatctaa 21397871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 66
Target Start/End: Original strand, 21792331 - 21792364
Alignment:
Q  33 tgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||||||||||||||||||| |||||||    
T  21792331 tgaagaatctttattttacaaggacgaaatctaa 21792364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 66
Target Start/End: Original strand, 24359675 - 24359708
Alignment:
Q  33 tgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||||||||||||||||||| |||||||    
T  24359675 tgaagaatctttattttacaaggacgaaatctaa 24359708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 28561543 - 28561502
Alignment:
Q  25 ggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||| ||||||||| ||||||||||||||| ||||||||    
T  28561543 ggcaatcttgaagaatccttattttacaaggacagaatctaa 28561502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 28567041 - 28567000
Alignment:
Q  25 ggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||| ||||||||| ||||||||||||||| ||||||||    
T  28567041 ggcaatcttgaagaatccttattttacaaggacagaatctaa 28567000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 461 - 498
Target Start/End: Complemental strand, 37051665 - 37051628
Alignment:
Q  461 ctatatcaccgctatttgacaacactttgtactaaata 498  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  37051665 ctatagcactgctatttgacaacactttgtactaaata 37051628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 469 - 498
Target Start/End: Complemental strand, 44806321 - 44806292
Alignment:
Q  469 ccgctatttgacaacactttgtactaaata 498  Q
    ||||||||||||||||||||||||||||||    
T  44806321 ccgctatttgacaacactttgtactaaata 44806292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 1601783 - 1601743
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaat 62  Q
    |||||||||| ||||||||||| ||||||| ||||||||||    
T  1601783 gggggcaatcgtgaagaatcttcattttactaggacggaat 1601743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 80 - 116
Target Start/End: Original strand, 8304179 - 8304215
Alignment:
Q  80 acaggggataaaatcaaaagtgccctatattacaggg 116  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  8304179 acaggggctaaaatcaaaagtgcactatattacaggg 8304215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 95 - 135
Target Start/End: Original strand, 40702027 - 40702067
Alignment:
Q  95 aaaagtgccctatattacagggggtaaaagtctattaaccc 135  Q
    ||||||| |||||||||||||||||||| | ||||||||||    
T  40702027 aaaagtgacctatattacagggggtaaaggcctattaaccc 40702067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 42349073 - 42349033
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaat 62  Q
    |||| ||||| ||||||||||| ||||||||||||||||||    
T  42349073 ggggacaatcttgaagaatcttcattttacaaggacggaat 42349033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 17763457 - 17763405
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||| |||||||||| ||||||||||| ||||||||||||||||||||||    
T  17763457 agggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 17763405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 17764636 - 17764688
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||| |||||||||| ||||||||||| ||||||||||||||||||||||    
T  17764636 agggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 17764688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 24436330 - 24436374
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  24436330 gggggcaatcctgaggaatctttattttacaaggacggaatctaa 24436374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 48170198 - 48170250
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||| |||||||||| ||||||||||| ||||||||||||||||||||||    
T  48170198 agggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 48170250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 9553513 - 9553400
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaannnnnnnnnnnnnacaggggataaaatcaaaagtgccctatattacagggggtaa 121  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||             ||||| |  |||| ||||||||||||||||||||||||||||    
T  9553513 gggggcaatcgtgaagaatcttcattttacaaggacggaatctaaaaaaaaataatttacaggaggcaaaaccaaaagtgccctatattacagggggtaa 9553414  T
Q  122 aagtctattaaccc 135  Q
    |   ||||||||||    
T  9553413 agacctattaaccc 9553400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 47638765 - 47638806
Alignment:
Q  25 ggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  47638765 ggcaatcctgaagaatctttattttacaagtacggaatctaa 47638806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 1830932 - 1830880
Alignment:
Q  14 agggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||| ||| |||||| ||||||||||||||||||||| ||||||||||||    
T  1830932 agggctcagggagcaatcttgaagaatctttattttacaaagacggaatctaa 1830880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 9554204 - 9554248
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||    
T  9554204 gggggcaatcgtgaagaatcttcattttacaaggacggaatctaa 9554248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 34158170 - 34158126
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||    
T  34158170 gggggcaatcttgaagaatcttcattttacaaggacggaatctaa 34158126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 35891119 - 35891075
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||||||||||||||||||||||||| |||| |||||||    
T  35891119 gggggcaatcctgaagaatctttattttacaaagacgaaatctaa 35891075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 8175913 - 8175956
Alignment:
Q  23 ggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||||||||||||  |||||||||||||||||||||||    
T  8175913 ggggcaatcctgaagaatcactattttacaaggacggaatctaa 8175956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 23806283 - 23806229
Alignment:
Q  80 acaggggataaaatcaaaagtgccctatattacagggggtaaaagtctattaaccc 135  Q
    |||||||| ||||||||||||| |||||||| ||||||||||||| ||||||||||    
T  23806283 acagggga-aaaatcaaaagtgacctatattgcagggggtaaaagcctattaaccc 23806229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 89 - 135
Target Start/End: Original strand, 1831990 - 1832036
Alignment:
Q  89 aaaatcaaaagtgccctatattacagggggtaaaagtctattaaccc 135  Q
    ||||||||||||||||||||||||||||||||||   ||||||||||    
T  1831990 aaaatcaaaagtgccctatattacagggggtaaagccctattaaccc 1832036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 436 - 573
Target Start/End: Complemental strand, 5336600 - 5336465
Alignment:
Q  436 gttcaaattccactacactacagttctatatcaccgctatttgacaacactttgtactaaataatgtgtcgtggaacaatactgttttgttcagattctg 535  Q
    |||||||||| |||| |||| ||| ||||| || |||||||| |||||||||||| ||||| | ||| || ||||||||||    |||||||| ||||      
T  5336600 gttcaaattctactatactatagtgctatagcaacgctatttaacaacactttgtgctaaacagtgtatcatggaacaataggaatttgttcaaattcca 5336501  T
Q  536 ctatgccatggcgccatagcagctatttgacaacacta 573  Q
    ||||| ||  |||| ||||| ||||| |||||||||||    
T  5336500 ctatgtca--gcgctatagccgctatatgacaacacta 5336465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 64
Target Start/End: Complemental strand, 11056845 - 11056803
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatct 64  Q
    |||||||||| ||||||||||| ||||||||||||||||||||    
T  11056845 gggggcaatcgtgaagaatcttcattttacaaggacggaatct 11056803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 33757456 - 33757410
Alignment:
Q  89 aaaatcaaaagtgccctatattacagggggtaaaagtctattaaccc 135  Q
    ||||||||||||| ||||||||||||||||||||  |||||||||||    
T  33757456 aaaatcaaaagtgacctatattacagggggtaaagatctattaaccc 33757410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 13772580 - 13772629
Alignment:
Q  17 gctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||| ||||| |||| |||||||||||||||||||||||| |||||||||    
T  13772580 gctcagggggtaatcttgaagaatctttattttacaaggatggaatctaa 13772629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 1831925 - 1831969
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||| ||||||||||||||||||||||||  ||||||||    
T  1831925 gggggcaatcttgaagaatctttattttacaaggatagaatctaa 1831969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 20164425 - 20164480
Alignment:
Q  80 acaggggataaaatcaaaagtgccctatattacagggggtaaaagtctattaaccc 135  Q
    |||| |||||||||| ||| || |||||||||||||||||||||  ||||||||||    
T  20164425 acagcggataaaatcgaaaatgacctatattacagggggtaaaacactattaaccc 20164480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 42509040 - 42509095
Alignment:
Q  80 acaggggataaaatcaaaagtgccctatattacagggggtaaaagtctattaaccc 135  Q
    |||||||  |||| ||||||||||||||||||||| ||||||||  ||||||||||    
T  42509040 acagggggcaaaaccaaaagtgccctatattacagagggtaaaacactattaaccc 42509095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 22 - 56
Target Start/End: Complemental strand, 47637828 - 47637794
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaagga 56  Q
    |||||||||| ||||||||||||||||||||||||    
T  47637828 gggggcaatcatgaagaatctttattttacaagga 47637794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 469 - 498
Target Start/End: Original strand, 7245947 - 7245976
Alignment:
Q  469 ccgctatttgacaacactttgtactaaata 498  Q
    ||||||||||||||||||||||||||||||    
T  7245947 ccgctatttgacaacactttgtactaaata 7245976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 473 - 542
Target Start/End: Original strand, 28613246 - 28613315
Alignment:
Q  473 tatttgacaacactttgtactaaataatgtgtcgtggaacaatactgttttgttcagattctgctatgcc 542  Q
    |||||||||||| ||||||||| ||| ||| |||||||||||||    ||||| || |||||||||||||    
T  28613246 tatttgacaacattttgtactatatagtgtatcgtggaacaatagccgtttgtccaaattctgctatgcc 28613315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 35891051 - 35891010
Alignment:
Q  94 caaaagtgccctatattacagggggtaaaagtctattaaccc 135  Q
    ||||||| || ||||||||||||||||||| |||||||||||    
T  35891051 caaaagtaccttatattacagggggtaaaactctattaaccc 35891010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 469 - 538
Target Start/End: Original strand, 38622877 - 38622946
Alignment:
Q  469 ccgctatttgacaacactttgtactaaataatgtgtcgtggaacaatactgttttgttcagattctgcta 538  Q
    |||||||||||||||| ||||| ||||||| ||| || ||||||||||  | ||| |||| |||||||||    
T  38622877 ccgctatttgacaacattttgtgctaaatagtgtatcatggaacaatatcgatttattcaaattctgcta 38622946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 5219038 - 5219094
Alignment:
Q  80 acaggggataaaatcaaaagtgccctatattaca-gggggtaaaagtctattaaccc 135  Q
    |||||||  ||||||||||||| ||||||||||| ||||||||| | ||||||||||    
T  5219038 acagggggcaaaatcaaaagtgacctatattacaggggggtaaaggcctattaaccc 5219094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 8174997 - 8174953
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||| ||||| ||||||||||| ||||||||| ||||||||||||    
T  8174997 ggggacaatcgtgaagaatcttcattttacaaagacggaatctaa 8174953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 11058117 - 11058161
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||| |||||||| ||||||||||||| || ||||||||    
T  11058117 gggggcaatcatgaagaatttttattttacaagaacagaatctaa 11058161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 28 - 56
Target Start/End: Original strand, 22718512 - 22718540
Alignment:
Q  28 aatcctgaagaatctttattttacaagga 56  Q
    |||||||||||||||||||||||||||||    
T  22718512 aatcctgaagaatctttattttacaagga 22718540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 25274772 - 25274728
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||| ||||||||||||||||||||||| |||||  |||||||||    
T  25274772 ggggtcaatcctgaagaatctttatttttcaagggtggaatctaa 25274728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 25776450 - 25776494
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||  |||||||| || ||||||||||||||||||||||    
T  25776450 gggggcaattgtgaagaattttcattttacaaggacggaatctaa 25776494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 33767334 - 33767378
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||| ||||| ||||||||||| ||||||||| ||||||||||||    
T  33767334 ggggacaatcgtgaagaatcttaattttacaaagacggaatctaa 33767378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 37413831 - 37413787
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||| ||||||||||||||||| ||||| |||||| |||||||||    
T  37413831 ggggtcaatcctgaagaatcttcatttttcaaggatggaatctaa 37413787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 220 - 275
Alignment:
Q  11 caaagggctcggggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||| |||||||||| ||||||||||| |||||| |||||||||||||||    
T  220 caaagggctcagggggcaatcttgaagaatcttcattttataaggacggaatctaa 275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 36; Significance: 0.00000000006; HSPs: 3)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 4819 - 4776
Alignment:
Q  23 ggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||    
T  4819 ggggcaatcgtgaagaatcttcattttacaaggacggaatctaa 4776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 65
Target Start/End: Original strand, 5837 - 5880
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatcta 65  Q
    |||||||||| ||||| ||||| |||||||||||||||||||||    
T  5837 gggggcaatcgtgaagtatcttcattttacaaggacggaatcta 5880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 22 - 56
Target Start/End: Complemental strand, 16731 - 16697
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaagga 56  Q
    ||||||||||||||| |||||||||||||||||||    
T  16731 gggggcaatcctgaataatctttattttacaagga 16697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0933 (Bit Score: 34; Significance: 0.0000000009; HSPs: 2)
Name: scaffold0933
Description:

Target: scaffold0933; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 2734 - 2775
Alignment:
Q  94 caaaagtgccctatattacagggggtaaaagtctattaaccc 135  Q
    ||||||| |||||||||||||||||||||| |||||||||||    
T  2734 caaaagtaccctatattacagggggtaaaactctattaaccc 2775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0933; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 27 - 57
Target Start/End: Original strand, 2667 - 2697
Alignment:
Q  27 caatcctgaagaatctttattttacaaggac 57  Q
    |||||||||||||||||||||||||||||||    
T  2667 caatcctgaagaatctttattttacaaggac 2697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 17400 - 17440
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaat 62  Q
    |||||||||| ||||||||||| ||||||||||||||||||    
T  17400 gggggcaatcgtgaagaatcttcattttacaaggacggaat 17440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 15987 - 15947
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaat 62  Q
    ||||||||||  |||||||||| ||||||||||||||||||    
T  15987 gggggcaatctcgaagaatcttcattttacaaggacggaat 15947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 36174 - 36138
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacg 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  36174 gggggcaatcctgaaaaatctttattttacaaggacg 36138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 31; Significance: 0.00000005; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 22 - 64
Target Start/End: Complemental strand, 8195 - 8153
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatct 64  Q
    |||||||||| |||| |||||| ||||||||||||||||||||    
T  8195 gggggcaatcgtgaaaaatcttcattttacaaggacggaatct 8153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 22 - 64
Target Start/End: Complemental strand, 15777 - 15735
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatct 64  Q
    |||||||||| |||| |||||| ||||||||||||||||||||    
T  15777 gggggcaatcgtgaaaaatcttcattttacaaggacggaatct 15735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 22 - 64
Target Start/End: Complemental strand, 25729 - 25687
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatct 64  Q
    |||||||||| |||| |||||| ||||||||||||||||||||    
T  25729 gggggcaatcgtgaaaaatcttcattttacaaggacggaatct 25687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 117
Target Start/End: Complemental strand, 51487 - 51450
Alignment:
Q  80 acaggggataaaatcaaaagtgccctatattacagggg 117  Q
    ||||||| ||||||||||||||| ||||||||||||||    
T  51487 acaggggctaaaatcaaaagtgcactatattacagggg 51450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0913 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0913
Description:

Target: scaffold0913; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 472 - 516
Target Start/End: Original strand, 1279 - 1323
Alignment:
Q  472 ctatttgacaacactttgtactaaataatgtgtcgtggaacaata 516  Q
    ||||||||||||||||||||||||||| ||| ||  |||||||||    
T  1279 ctatttgacaacactttgtactaaatagtgtatcacggaacaata 1323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0898 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0898
Description:

Target: scaffold0898; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 472 - 516
Target Start/End: Complemental strand, 4322 - 4278
Alignment:
Q  472 ctatttgacaacactttgtactaaataatgtgtcgtggaacaata 516  Q
    ||||||||||||||||||||||||||| ||| ||  |||||||||    
T  4322 ctatttgacaacactttgtactaaatagtgtatcacggaacaata 4278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 20952 - 20908
Alignment:
Q  22 gggggcaatcctgaagaatctttattttacaaggacggaatctaa 66  Q
    |||||||||| |||| | |||| ||||||||||||||||||||||    
T  20952 gggggcaatcgtgaaaattcttcattttacaaggacggaatctaa 20908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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