View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15491_low_60 (Length: 203)

Name: NF15491_low_60
Description: NF15491
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15491_low_60
NF15491_low_60
[»] chr8 (27 HSPs)
chr8 (1-109)||(42185147-42185255)
chr8 (106-193)||(29800967-29801054)
chr8 (112-193)||(35181518-35181599)
chr8 (112-193)||(34304790-34304871)
chr8 (112-193)||(42197452-42197533)
chr8 (100-193)||(42295185-42295278)
chr8 (109-193)||(33630010-33630094)
chr8 (106-193)||(20148756-20148843)
chr8 (112-193)||(1375544-1375625)
chr8 (112-193)||(11582768-11582849)
chr8 (112-193)||(29705364-29705445)
chr8 (112-193)||(36743500-36743581)
chr8 (112-192)||(2165981-2166061)
chr8 (110-193)||(26125635-26125718)
chr8 (110-193)||(30912579-30912662)
chr8 (107-193)||(16603643-16603729)
chr8 (112-193)||(5754905-5754986)
chr8 (112-193)||(18066735-18066816)
chr8 (109-193)||(42699256-42699340)
chr8 (112-190)||(30660762-30660840)
chr8 (112-193)||(45397318-45397399)
chr8 (106-193)||(2546992-2547079)
chr8 (118-193)||(31384672-31384747)
chr8 (112-193)||(16358850-16358932)
chr8 (112-146)||(19386634-19386668)
chr8 (112-149)||(10678201-10678238)
chr8 (153-193)||(10678169-10678209)
[»] chr6 (18 HSPs)
chr6 (112-193)||(33242405-33242486)
chr6 (112-193)||(33253915-33253996)
chr6 (110-193)||(24204004-24204087)
chr6 (110-193)||(27441542-27441625)
chr6 (112-193)||(13743238-13743319)
chr6 (112-193)||(13748738-13748819)
chr6 (107-193)||(9698350-9698436)
chr6 (107-193)||(21279926-21280012)
chr6 (112-193)||(7292749-7292830)
chr6 (112-193)||(7367551-7367632)
chr6 (112-193)||(26670026-26670107)
chr6 (109-193)||(30735981-30736065)
chr6 (112-193)||(3213402-3213483)
chr6 (112-193)||(7273352-7273433)
chr6 (112-193)||(26466801-26466882)
chr6 (107-187)||(31109245-31109325)
chr6 (103-193)||(21293694-21293784)
chr6 (112-193)||(30014345-30014426)
[»] chr2 (27 HSPs)
chr2 (110-193)||(11825671-11825754)
chr2 (112-193)||(966851-966932)
chr2 (112-193)||(43114559-43114640)
chr2 (110-193)||(41281991-41282074)
chr2 (108-193)||(6518486-6518570)
chr2 (116-193)||(34895758-34895835)
chr2 (107-193)||(18491702-18491788)
chr2 (112-193)||(12415477-12415558)
chr2 (112-193)||(12427537-12427618)
chr2 (112-193)||(16803970-16804051)
chr2 (112-193)||(16843252-16843333)
chr2 (110-193)||(4299437-4299520)
chr2 (106-192)||(43490419-43490505)
chr2 (112-193)||(1750416-1750497)
chr2 (112-193)||(4764743-4764824)
chr2 (112-193)||(12302270-12302351)
chr2 (112-193)||(16096749-16096830)
chr2 (112-193)||(19047159-19047240)
chr2 (112-193)||(34817793-34817874)
chr2 (112-193)||(43335780-43335861)
chr2 (103-193)||(8896600-8896690)
chr2 (112-193)||(30838634-30838715)
chr2 (109-189)||(33229300-33229381)
chr2 (110-190)||(7070416-7070496)
chr2 (112-193)||(13780752-13780833)
chr2 (112-192)||(14285678-14285758)
chr2 (106-193)||(42026763-42026852)
[»] chr4 (37 HSPs)
chr4 (108-193)||(27893859-27893944)
chr4 (107-193)||(48435596-48435682)
chr4 (112-193)||(17619169-17619250)
chr4 (112-193)||(27864566-27864647)
chr4 (112-193)||(711962-712043)
chr4 (108-193)||(3756263-3756348)
chr4 (112-193)||(32728359-32728440)
chr4 (112-192)||(28988475-28988555)
chr4 (112-190)||(960890-960968)
chr4 (112-193)||(1771283-1771364)
chr4 (112-193)||(46827723-46827804)
chr4 (112-193)||(55272393-55272474)
chr4 (112-193)||(55966363-55966444)
chr4 (109-193)||(35037004-35037088)
chr4 (112-193)||(25051695-25051776)
chr4 (108-193)||(31680900-31680985)
chr4 (112-193)||(48463467-48463548)
chr4 (109-193)||(43514703-43514787)
chr4 (112-190)||(27550311-27550389)
chr4 (112-193)||(28982839-28982920)
chr4 (112-193)||(33703143-33703224)
chr4 (110-193)||(43949818-43949902)
chr4 (110-193)||(41327560-41327643)
chr4 (112-190)||(12496958-12497036)
chr4 (112-193)||(35017735-35017815)
chr4 (112-193)||(41878408-41878489)
chr4 (112-193)||(45490330-45490411)
chr4 (112-192)||(27316731-27316811)
chr4 (110-193)||(39631100-39631184)
chr4 (106-161)||(30189269-30189324)
chr4 (110-193)||(38851513-38851596)
chr4 (143-193)||(19879987-19880037)
chr4 (112-190)||(49229684-49229762)
chr4 (112-193)||(23035982-23036063)
chr4 (112-149)||(36004165-36004202)
chr4 (112-189)||(41847973-41848050)
chr4 (113-193)||(23204795-23204875)
[»] chr1 (21 HSPs)
chr1 (112-193)||(44112679-44112760)
chr1 (112-193)||(48119630-48119711)
chr1 (107-193)||(45427762-45427848)
chr1 (112-193)||(35003296-35003377)
chr1 (112-193)||(38113212-38113293)
chr1 (112-193)||(41065155-41065236)
chr1 (112-193)||(43571103-43571184)
chr1 (108-193)||(2497579-2497664)
chr1 (112-193)||(5489778-5489859)
chr1 (112-193)||(38335920-38336001)
chr1 (112-193)||(35000130-35000211)
chr1 (112-193)||(37814780-37814861)
chr1 (112-193)||(45639749-45639830)
chr1 (112-193)||(46168385-46168466)
chr1 (107-192)||(750323-750408)
chr1 (112-193)||(45705827-45705908)
chr1 (112-193)||(48498979-48499060)
chr1 (107-193)||(4401324-4401411)
chr1 (112-167)||(14427349-14427404)
chr1 (112-193)||(23989540-23989622)
chr1 (112-182)||(24769527-24769597)
[»] chr5 (13 HSPs)
chr5 (109-193)||(5256994-5257078)
chr5 (102-193)||(7617125-7617216)
chr5 (106-193)||(17208070-17208157)
chr5 (112-182)||(33855071-33855141)
chr5 (112-193)||(2614666-2614747)
chr5 (112-193)||(22512307-22512388)
chr5 (112-193)||(32473411-32473492)
chr5 (112-193)||(41334680-41334761)
chr5 (112-193)||(18033984-18034065)
chr5 (112-193)||(38470581-38470662)
chr5 (112-193)||(33801471-33801552)
chr5 (110-168)||(25915029-25915087)
chr5 (112-193)||(30622736-30622816)
[»] scaffold0100 (1 HSPs)
scaffold0100 (112-193)||(35473-35554)
[»] chr7 (25 HSPs)
chr7 (112-193)||(40236921-40237002)
chr7 (112-193)||(33384872-33384954)
chr7 (110-193)||(10573749-10573832)
chr7 (106-193)||(44326174-44326261)
chr7 (108-193)||(4638216-4638301)
chr7 (112-193)||(5194248-5194329)
chr7 (112-193)||(24001029-24001110)
chr7 (112-193)||(31513289-31513370)
chr7 (112-193)||(42538448-42538529)
chr7 (109-193)||(43343641-43343725)
chr7 (106-193)||(43317439-43317526)
chr7 (110-193)||(44416951-44417034)
chr7 (113-190)||(26898422-26898499)
chr7 (112-193)||(27535248-27535329)
chr7 (112-193)||(31408650-31408731)
chr7 (112-193)||(35069723-35069804)
chr7 (119-190)||(32029837-32029908)
chr7 (112-171)||(39998410-39998469)
chr7 (107-193)||(16180374-16180459)
chr7 (112-193)||(5015397-5015478)
chr7 (112-193)||(5810941-5811022)
chr7 (112-193)||(42972854-42972935)
chr7 (112-167)||(41861676-41861731)
chr7 (107-193)||(24280613-24280699)
chr7 (140-193)||(38160596-38160649)
[»] chr3 (23 HSPs)
chr3 (112-193)||(9434126-9434207)
chr3 (112-193)||(40808867-40808948)
chr3 (112-193)||(4190282-4190363)
chr3 (112-193)||(10457909-10457990)
chr3 (112-193)||(25996270-25996351)
chr3 (112-193)||(42100690-42100771)
chr3 (112-193)||(45126945-45127026)
chr3 (112-193)||(46941055-46941136)
chr3 (112-193)||(54237098-54237179)
chr3 (110-193)||(27748563-27748646)
chr3 (107-193)||(25413678-25413764)
chr3 (107-193)||(53581875-53581961)
chr3 (112-193)||(24688419-24688500)
chr3 (112-193)||(36150132-36150213)
chr3 (112-193)||(40480751-40480832)
chr3 (112-193)||(42394436-42394517)
chr3 (112-193)||(54246165-54246246)
chr3 (112-193)||(34791831-34791912)
chr3 (112-193)||(51757595-51757676)
chr3 (112-193)||(52627994-52628075)
chr3 (112-193)||(53273701-53273782)
chr3 (112-193)||(47191043-47191123)
chr3 (114-193)||(29558251-29558330)
[»] scaffold0003 (1 HSPs)
scaffold0003 (110-193)||(45736-45819)
[»] scaffold0385 (1 HSPs)
scaffold0385 (112-193)||(11253-11334)
[»] scaffold0119 (1 HSPs)
scaffold0119 (112-193)||(687-768)
[»] scaffold0038 (1 HSPs)
scaffold0038 (112-193)||(112657-112738)
[»] scaffold0187 (2 HSPs)
scaffold0187 (107-193)||(14205-14291)
scaffold0187 (107-193)||(24533-24619)
[»] scaffold0157 (1 HSPs)
scaffold0157 (112-190)||(23441-23519)


Alignment Details
Target: chr8 (Bit Score: 109; Significance: 5e-55; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 42185255 - 42185147
Alignment:
Q  1 ataaaggtaagataaacacgttttaggtaacatttctctagtttacttcatattatattgacaatatatgtttaaggtcctaagctaacctgggatatca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42185255 ataaaggtaagataaacacgttttaggtaacatttctctagtttacttcatattatattgacaatatatgtttaaggtcctaagctaacctgggatatca 42185156  T
Q  101 atattaata 109  Q
    |||||||||    
T  42185155 atattaata 42185147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 106 - 193
Target Start/End: Complemental strand, 29801054 - 29800967
Alignment:
Q  106 aatagaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||||||||||||||||| ||||||||||| ||||||| ||||||| |||||||||||||||||||  ||||||||| ||||||||||    
T  29801054 aatagaaaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcac 29800967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 35181518 - 35181599
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| ||||||||||||||| |||| |||||||||| ||||||||| ||||||||| ||||||||||    
T  35181518 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcac 35181599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 34304790 - 34304871
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||| | ||||||||||||||| |||| |||||||||| ||||||||| ||||||||| ||||||||||    
T  34304790 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcac 34304871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 42197533 - 42197452
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||||||||||||||||||||||| || ||||||||||||||||| | ||||||||||||  ||||||||| ||||||||||    
T  42197533 aaaatgttacatgaacaccatttattcctacaccccattgcacacactatgtattagggatattttggtaagttcatctcac 42197452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 100 - 193
Target Start/End: Original strand, 42295185 - 42295278
Alignment:
Q  100 aatattaatagaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||| ||| |||||||||||||||||||||| |||| || |||||| ||||| |||| ||||||||||||||  ||||||||| ||||||||||    
T  42295185 aataataaaagaaaaatgttacatgaacaccctttattcctacacctcattgtacactccatgtattagggatattttggtaagttcatctcac 42295278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 33630094 - 33630010
Alignment:
Q  109 agaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||||||||||||| ||||||| |||||||||||||| ||||| |||||| ||| ||||||||| |||| |||| ||||||||||    
T  33630094 agaaaaatgttacacgaacaccctttaatcatacacctcattgtacaccctatgcattagggacattttagtaatttcatctcac 33630010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 106 - 193
Target Start/End: Original strand, 20148756 - 20148843
Alignment:
Q  106 aatagaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||||||||||||||||| |||||| |||| ||||||| ||||||| ||||| ||| |||||||||  ||||||||| ||||||||||    
T  20148756 aatagaaaaatgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatattttggtaagttcatctcac 20148843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 1375544 - 1375625
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||| ||||||||||||| |||| |||||||||| |||| ||||||||| |||||||||  |||||||||||| |||||||    
T  1375544 aaaattttacatgaacaccttttattcatacacccaattgtacaccccatatattagggatattttggtaaatttatctcac 1375625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 11582768 - 11582849
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| |||| || |||| ||||||| |||||| ||||||||||||  ||||||||| ||||||||||    
T  11582768 aaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 11582849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 29705364 - 29705445
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| |||| |  |||||||||||| |||||||||||||||||||  ||||| ||| ||||||||||    
T  29705364 aaaatgttacatgaacaccctttatttctacaccccattgtacaccccatgtattagggatattttgataagttcatctcac 29705445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 36743581 - 36743500
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| |||| || |||| ||||||| |||||| ||||||||||||  ||||||||| ||||||||||    
T  36743581 aaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 36743500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 112 - 192
Target Start/End: Complemental strand, 2166061 - 2165981
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctca 192  Q
    ||||| |||||||||||||||||| || |||||||||||| | |||||||||||||| ||  ||||||||| |||||||||    
T  2166061 aaaatattacatgaacaccatttattcctacaccccattgtataccccatgtattagagatattttggtaagttcatctca 2165981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 110 - 193
Target Start/End: Original strand, 26125635 - 26125718
Alignment:
Q  110 gaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||||||||||||| |||||| |||| |||||||  |||||| |||||| ||||||||||||  ||||||||| ||||||||||    
T  26125635 gaaaaatgttacataaacaccctttattcatacattccattgtacaccctatgtattagggatattttggtaagttcatctcac 26125718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 110 - 193
Target Start/End: Complemental strand, 30912662 - 30912579
Alignment:
Q  110 gaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||||| |||| || |||||||||||| ||||  ||||||||||||   ||||||||| ||||||||||    
T  30912662 gaaaaatgttacatgaacaccctttattcctacaccccattgtacacttcatgtattaggggtattttggtaagttcatctcac 30912579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 193
Target Start/End: Complemental strand, 16603729 - 16603643
Alignment:
Q  107 atagaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||| ||||||||||||| ||||| ||||||||||||||  |||  |||||||||| ||||  ||| ||||||||||||||||||||    
T  16603729 ataggaaaatgttacatgcacaccctttaatcatacaccttattatacaccccatgcattaaagacattttggtaaattcatctcac 16603643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 5754905 - 5754986
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| |||| || |||| ||||||| ||| ||||| |||||||||  ||||||||| ||||||||||    
T  5754905 aaaatgttacatgaacaccttttattcctacatcccattgtacatcccatatattagggatattttggtaagttcatctcac 5754986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 18066816 - 18066735
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| ||||||||||||  | |||| ||| |||||||||||||||  |||| |||| ||||||||||    
T  18066816 aaaatgttacatgaacaccctttaatcatacattctattgtacatcccatgtattagggatattttagtaatttcatctcac 18066735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 42699256 - 42699340
Alignment:
Q  109 agaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||||||||||||||||||||| |||| || |||||||||||| |||||  |||||||| |||  |||| |||| ||||||||||    
T  42699256 agaaaaatgttacatgaacaccctttattcctacaccccattgtacaccttatgtattatggatatttttgtaagttcatctcac 42699340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 190
Target Start/End: Complemental strand, 30660840 - 30660762
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatct 190  Q
    ||||||||||||||||||| |||| |  |||| ||||||| |||||| ||||||||||||  ||||||||| |||||||    
T  30660840 aaaatgttacatgaacaccctttatttctacatcccattgtacaccctatgtattagggatattttggtaagttcatct 30660762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 45397318 - 45397399
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||||||||| |||||||| |||| || |||||||||||  |||||| ||||||||||||  |||| |||| ||||||||||    
T  45397318 aaaatgttacgtgaacaccctttattcctacaccccattctacaccctatgtattagggatatttttgtaagttcatctcac 45397399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 193
Target Start/End: Original strand, 2546992 - 2547079
Alignment:
Q  106 aatagaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||| ||||||||||||||||||  |||| |  ||||| |||||| ||||| |||||||||||||  |||| |||| ||||||||||    
T  2546992 aataggaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttagtaagttcatctcac 2547079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 118 - 193
Target Start/End: Original strand, 31384672 - 31384747
Alignment:
Q  118 ttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||| |||| || ||||  | |||| ||||||||||||||||| |  ||||||||| ||||||||||    
T  31384672 ttacatgaacaccctttattcttacattctattgtacaccccatgtattaggaatattttggtaagttcatctcac 31384747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 16358932 - 16358850
Alignment:
Q  112 aaaatgttacat-gaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||||||||||| ||| ||| ||||||||||||||| |||| ||| |||||| |||| | |  ||||| ||||||||||||||    
T  16358932 aaaatgttacattgaagaccctttaatcatacaccctattgtacatcccatgcattaagaatattttgataaattcatctcac 16358850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 146
Target Start/End: Complemental strand, 19386668 - 19386634
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccc 146  Q
    ||||||||||||||||||| |||||||||||||||    
T  19386668 aaaatgttacatgaacaccctttaatcatacaccc 19386634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 112 - 149
Target Start/End: Complemental strand, 10678238 - 10678201
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccat 149  Q
    ||||||||||||||| ||| ||||||||||||||||||    
T  10678238 aaaatgttacatgaataccctttaatcatacaccccat 10678201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 10678209 - 10678169
Alignment:
Q  153 acaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||| ||||| |||| ||||||||||||||||||||    
T  10678209 acaccccatatattaaggacattttggtaaattcatctcac 10678169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 5e-27; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 33242405 - 33242486
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||||||||||||||||||  |||| ||||||||||||||| |||| ||||||||||||||||||||    
T  33242405 aaaatgttacatgaacaccatttaatcatacaccttattgtacaccccatgtattaaggacattttggtaaattcatctcac 33242486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 33253915 - 33253996
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||||||||||||||||||||||||||| |||||| |||| |||||||||| ||||||||| | ||||||||||||||||||    
T  33253915 aaaatgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcac 33253996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 110 - 193
Target Start/End: Complemental strand, 24204087 - 24204004
Alignment:
Q  110 gaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||||||||||||||||||||||||| || ||||||| |||| |||| ||||||||||||||  ||||||||| ||||||||||    
T  24204087 gaaaaatgttacatgaacaccatttattcctacaccctattgtacactccatgtattagggatattttggtaagttcatctcac 24204004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 110 - 193
Target Start/End: Original strand, 27441542 - 27441625
Alignment:
Q  110 gaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||||| ||||||||||||||| |||| ||| || |||||||| |||  ||||||||||||||||||||    
T  27441542 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattttggtaaattcatctcac 27441625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 13743319 - 13743238
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| |||| ||||||| || |||| |||||||||||||||||||  ||||||||| ||||||||||    
T  13743319 aaaatgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattttggtaagttcatctcac 13743238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 13748819 - 13748738
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| |||| ||||||| || |||| |||||||||||||||||||  ||||||||| ||||||||||    
T  13748819 aaaatgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattttggtaagttcatctcac 13748738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 107 - 193
Target Start/End: Complemental strand, 9698436 - 9698350
Alignment:
Q  107 atagaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||| ||||||||||||||||||| |||| || |||| ||||||| |||||| ||||||||||||  ||||||||| ||||||||||    
T  9698436 ataggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 9698350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 107 - 193
Target Start/End: Original strand, 21279926 - 21280012
Alignment:
Q  107 atagaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||| ||||||||||||||||||| |||| |  ||||  |||||||||| |||||||||||||||  ||||||||||||||||||||    
T  21279926 ataggaaaatgttacatgaacaccctttatttctacattccattgcacatcccatgtattagggatattttggtaaattcatctcac 21280012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 7292749 - 7292830
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||| |||||||||||| ||||||||| ||||  |||||| ||||||||||||  ||||||||| ||||||||||    
T  7292749 aaaatgttacaagaacaccatttattcatacacctcattatacaccctatgtattagggatattttggtaagttcatctcac 7292830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 7367551 - 7367632
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||| ||||||| |||||| ||||||||| ||||| ||| |||||||||||||||  ||||||||| ||||||||||    
T  7367551 aaaatgttatatgaacatcatttattcatacacctcattgtacatcccatgtattagggatattttggtaagttcatctcac 7367632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 26670107 - 26670026
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| |||| || |||||| ||||| ||||| |||||||||||||  ||||||||| ||||||||||    
T  26670107 aaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcac 26670026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 30735981 - 30736065
Alignment:
Q  109 agaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||||||||||||||||||||  |||| || |||||||||||| ||||| |||||||||| ||  ||||||||| ||||||||||    
T  30735981 agaaaaatgttacatgaacactttttattcctacaccccattgtacacctcatgtattagtgatattttggtaagttcatctcac 30736065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 3213402 - 3213483
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||||||||||| |||||| |||| ||||||| | ||||| ||||||||||||||| |||  ||||||||||||||| ||||    
T  3213402 aaaatgttacataaacaccctttattcatacatctcattgtacaccccatgtattaaggatattttggtaaattcatttcac 3213483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 7273433 - 7273352
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| |||| || ||||||  |||| |||||||||||||||| ||  ||||||||| ||||||||||    
T  7273433 aaaatgttacatgaacaccctttattcctacaccttattgtacaccccatgtattagagatattttggtaagttcatctcac 7273352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 26466801 - 26466882
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||||||||||| |||||| |||| || |||||||||||| |||| |||||||||||||   ||||||||| ||||||||||    
T  26466801 aaaatgttacataaacaccctttattcctacaccccattgtacactccatgtattagggttattttggtaagttcatctcac 26466882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 187
Target Start/End: Complemental strand, 31109325 - 31109245
Alignment:
Q  107 atagaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattca 187  Q
    |||| ||||||||||||||||||| |||||||||||| ||||||  |||||||||| | ||||||  ||||| ||||||||    
T  31109325 ataggaaaatgttacatgaacaccctttaatcatacatcccattatacaccccatgcactagggatattttgataaattca 31109245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 21293784 - 21293694
Alignment:
Q  103 attaatagaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||||||| |||||||||||| |||||| |||| |||||||   || || ||||||||||||||| |||  ||||||||||||||| ||||    
T  21293784 attaataggaaaatgttacataaacaccctttattcatacatttcactgtacaccccatgtattaaggatattttggtaaattcatttcac 21293694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 30014345 - 30014426
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| |||| || |||| ||||||  ||| ||||||||||||| |  ||||||||| ||||||||||    
T  30014345 aaaatgttacatgaacaccctttattcctacatcccattatacatcccatgtattaggcatattttggtaagttcatctcac 30014426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 8e-26; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 110 - 193
Target Start/End: Complemental strand, 11825754 - 11825671
Alignment:
Q  110 gaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||||| ||||||||||||||| |||| |||||||||| ||||||||| ||||||||| ||||||||||    
T  11825754 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcac 11825671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 966932 - 966851
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| ||||||||||||||| |||| |||||||||| |||| | |||||||||||||||||||||||    
T  966932 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaagaacgttttggtaaattcatctcac 966851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 43114559 - 43114640
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| ||||||||||||||| |||| |||||||||| ||||||||| ||||||||| ||||||||||    
T  43114559 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcac 43114640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 110 - 193
Target Start/End: Complemental strand, 41282074 - 41281991
Alignment:
Q  110 gaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||||| ||||||||||||||| |||| |||||||||| ||||||||| ||||| ||| ||||||||||    
T  41282074 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttgataatttcatctcac 41281991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 108 - 193
Target Start/End: Complemental strand, 6518570 - 6518486
Alignment:
Q  108 tagaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||||||| ||||||||||||| | |||| |||||||||| ||||||||| ||||||||| ||||||||||    
T  6518570 tagaaaaatgttacatgaacacc-tttaatcatacactctattgtacaccccatgcattagggacattttggtaatttcatctcac 6518486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 116 - 193
Target Start/End: Complemental strand, 34895835 - 34895758
Alignment:
Q  116 tgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||||||||||||||||||||||| |||||| |||| |||||||||| ||||||||| | ||||||||||||||||||    
T  34895835 tgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcac 34895758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 107 - 193
Target Start/End: Original strand, 18491702 - 18491788
Alignment:
Q  107 atagaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||| ||||||||||||||||||| ||||||||||||||| |||| ||||| |||| |||| | || ||||||||||||||||||||    
T  18491702 ataggaaaatgttacatgaacaccctttaatcatacaccctattgtacacctcatgcattaagaacattttggtaaattcatctcac 18491788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 12415558 - 12415477
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| ||||||||||||||  |||| |||||||||| ||||||||| ||||||||| || |||||||    
T  12415558 aaaatgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattttggtaattttatctcac 12415477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 12427618 - 12427537
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| ||||||||||||||  |||| |||||||||| ||||||||| ||||||||| || |||||||    
T  12427618 aaaatgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattttggtaattttatctcac 12427537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 16803970 - 16804051
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| ||||||||||||||| |||| ||| |||||| ||||||||| ||||| ||| ||||||||||    
T  16803970 aaaatgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattttgataatttcatctcac 16804051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 16843252 - 16843333
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| ||||||||||||||| |||| ||| |||||| ||||||||| ||||| ||| ||||||||||    
T  16843252 aaaatgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattttgataatttcatctcac 16843333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 110 - 193
Target Start/End: Complemental strand, 4299520 - 4299437
Alignment:
Q  110 gaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||| ||||||||| ||||||||||||||| |||| |||| ||||| ||||  ||| ||||||||||||||||||||    
T  4299520 gaaaaatgttatatgaacaccctttaatcatacaccctattgtacactccatgcattaatgacattttggtaaattcatctcac 4299437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 106 - 192
Target Start/End: Complemental strand, 43490505 - 43490419
Alignment:
Q  106 aatagaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctca 192  Q
    ||||||||||||||||||||||||| |||| || |||| ||||||| |||| | ||||||||||||  ||||||||| |||||||||    
T  43490505 aatagaaaaatgttacatgaacaccctttattcctacatcccattgtacactctatgtattagggatattttggtaagttcatctca 43490419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 1750416 - 1750497
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| |||| || |||||||||||| |||||| ||||||||||||  |||| |||| ||||||||||    
T  1750416 aaaatgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagggatatttttgtaagttcatctcac 1750497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 4764824 - 4764743
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||||||||||| ||||||||||| || ||||||| |||| |||||||||||||||   |  ||||||||||||||||||||    
T  4764824 aaaatgttacatcaacaccatttattcctacaccctattgtacaccccatgtattataaatattttggtaaattcatctcac 4764743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 12302351 - 12302270
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| |||| |  |||||||||||| |||||| ||||||||||||  |||| |||| ||||||||||    
T  12302351 aaaatgttacatgaacaccctttatttctacaccccattgtacaccctatgtattagggatatttttgtaagttcatctcac 12302270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 16096749 - 16096830
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| |||| || |||||||||||  |||||||||||||||||||  ||||||| | || |||||||    
T  16096749 aaaatgttacatgaacaccctttattcctacaccccattatacaccccatgtattagggatattttggtgagttaatctcac 16096830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 19047159 - 19047240
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| |||| || ||||  |||||| |||||| ||||||||||||  ||||||||| ||||||||||    
T  19047159 aaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcac 19047240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 34817874 - 34817793
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| |||| ||| ||||| ||||| |||||||||| | || | || ||||||||||||||||||||    
T  34817874 aaaatgttacatgaacaccctttattcacacacctcattgtacaccccatgcactacgcacattttggtaaattcatctcac 34817793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 43335861 - 43335780
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||| ||||||| |||||| || |||||| ||||| ||| |||||||||||||||  ||||||||| ||||||||||    
T  43335861 aaaatgttatatgaacatcatttattcctacacctcattgtacatcccatgtattagggatattttggtaagttcatctcac 43335780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 8896690 - 8896600
Alignment:
Q  103 attaatagaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||||||||||||||||||||||||||| |||| ||| |||  |||||| |||||| ||  | |||| |  ||||||||||||||||||||    
T  8896690 attaatagaaaaatgttacatgaacaccctttattcacacattccattgtacaccctatacaataggaatattttggtaaattcatctcac 8896600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 30838634 - 30838715
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| |||| |  |||| |  |||| |||||||||||||||||||  ||||||||| ||||||||||    
T  30838634 aaaatgttacatgaacaccctttatttctacatcttattgtacaccccatgtattagggatattttggtaagttcatctcac 30838715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 189
Target Start/End: Original strand, 33229300 - 33229381
Alignment:
Q  109 agaaaaatgttacatgaacaccatttaat-catacaccccattgcacaccccatgtattagggacgttttggtaaattcatc 189  Q
    ||||||||| |||||||||||| ||| || | |||||| ||||| |||||||||||||||||||  ||||||||| ||||||    
T  33229300 agaaaaatgatacatgaacacccttttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatc 33229381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 190
Target Start/End: Original strand, 7070416 - 7070496
Alignment:
Q  110 gaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatct 190  Q
    ||||||||||||||||||||| |||| ||||||| ||||||| |  | |||| |||| ||||| ||||| |||||||||||    
T  7070416 gaaaaatgttacatgaacaccctttattcatacatcccattgtaacctccatttattggggacattttgataaattcatct 7070496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 13780833 - 13780752
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||||||||||| |||||  |||| ||| ||||| ||||| |||||||||  ||||||||  ||||| ||||||||||||||    
T  13780833 aaaatgttacatcaacacattttattcacacacctcattgtacaccccatacattagggatattttgataaattcatctcac 13780752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 192
Target Start/End: Original strand, 14285678 - 14285758
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctca 192  Q
    ||||| |||||  |||||| ||||||||||||||| |||| |||||| || |||||  ||  |||||||||||||||||||    
T  14285678 aaaatattacacaaacaccctttaatcatacaccctattgtacaccctatatattaaagatattttggtaaattcatctca 14285758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 193
Target Start/End: Original strand, 42026763 - 42026852
Alignment:
Q  106 aatagaaaaatgttacatgaacacc--atttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||| |||||||||||||||||||  ||||| |||||||  |||||| ||| |||  | ||||||||  |||||| |||||||||||||    
T  42026763 aataggaaaatgttacatgaacacccaatttattcatacattccattgtacatcccgcgcattagggatattttggcaaattcatctcac 42026852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 1e-24; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 108 - 193
Target Start/End: Complemental strand, 27893944 - 27893859
Alignment:
Q  108 tagaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||||||||||||||| ||||||||||| ||||||| ||||||| |||||||||||||||||||  ||||||||| ||||||||||    
T  27893944 tagaaaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaatttcatctcac 27893859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 107 - 193
Target Start/End: Complemental strand, 48435682 - 48435596
Alignment:
Q  107 atagaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||| ||| |||||||||||||||||||||||| |||||| |||| |||||||||| ||||||||| | ||||||||||||||||||    
T  48435682 ataggaaagtgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcac 48435596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 17619250 - 17619169
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| ||||||||||||||| |||| |||||||||| |||| |||  ||||||||||||||||||||    
T  17619250 aaaatgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaattcatctcac 17619169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 27864566 - 27864647
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||||||||||| ||||||||||| ||||||| ||||||| |||||||||||||||||||  ||||||||| ||||||||||    
T  27864566 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcac 27864647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 711962 - 712043
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| ||||||||||||||| |||| |||||| ||| |||| |||  ||||||||||||||||||||    
T  711962 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccctatgcattaaggatattttggtaaattcatctcac 712043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 108 - 193
Target Start/End: Complemental strand, 3756348 - 3756263
Alignment:
Q  108 tagaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||||||| ||||||||||||||| |||| |||||||||| |||| |||  |||| ||||||| |||||||    
T  3756348 tagaaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattttagtaaatttatctcac 3756263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 32728359 - 32728440
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||| | ||||||||||||||| |||| |||||||||| |||| |||| |||| |||||||||||||||    
T  32728359 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacattttagtaaattcatctcac 32728440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 112 - 192
Target Start/End: Original strand, 28988475 - 28988555
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctca 192  Q
    ||||||||||||||||||| |||| ||||||||| ||||| |||||||||| | ||||||| ||||| |||||||||||||    
T  28988475 aaaatgttacatgaacaccctttattcatacacctcattgtacaccccatgcactagggacattttgataaattcatctca 28988555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 112 - 190
Target Start/End: Complemental strand, 960968 - 960890
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatct 190  Q
    ||||||||||||||||||| ||||||||||||| | |||| |||||| ||  ||||||||| |||||||||||||||||    
T  960968 aaaatgttacatgaacaccctttaatcatacactctattgtacaccctatacattagggacattttggtaaattcatct 960890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 1771364 - 1771283
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| |||| || |||||||||||| |||||||||||||||| ||  ||||| ||| ||||||||||    
T  1771364 aaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattagagatattttgataagttcatctcac 1771283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 46827804 - 46827723
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| ||||||||||||| | |||| |||||| ||| |||| | ||||||||||||||| |||||||    
T  46827804 aaaatgttacatgaacaccctttaatcatacactctattgtacacccaatgcattaagaacgttttggtaaatttatctcac 46827723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 55272474 - 55272393
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||| | ||||||||||||| | |||| |||||||||| |||| |||  ||||||||||||||||||||    
T  55272474 aaaatgttacatgaacatcctttaatcatacactctattgtacaccccatgcattaaggatattttggtaaattcatctcac 55272393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 55966444 - 55966363
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||||||||||| |||||| |||| ||||||| ||||||| ||| |||||||||||||||  ||||||||| ||||||||||    
T  55966444 aaaatgttacataaacaccctttattcatacatcccattgtacatcccatgtattagggatattttggtaagttcatctcac 55966363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 35037004 - 35037088
Alignment:
Q  109 agaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||| |||| ||||| ||||||| | |||| |||||||||| |||| |||  ||||||||||||||||||||    
T  35037004 agaaaaatgttacatgagcaccctttaaccatacactctattgtacaccccatgcattaaggatattttggtaaattcatctcac 35037088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 25051695 - 25051776
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||| ||||||||||  |||| || |||||||||||| |||||| ||||||||||||  ||||||||| ||||||||||    
T  25051695 aaaatgtcacatgaacacactttattcctacaccccattgtacaccctatgtattagggatattttggtaagttcatctcac 25051776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 108 - 193
Target Start/End: Original strand, 31680900 - 31680985
Alignment:
Q  108 tagaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||||||||||||| | ||||||||||| |||||||  |||||| ||||||| | |||||||||  ||||||||| ||||||||||    
T  31680900 tagaaaaatgttacgtaaacaccatttattcatacattccattgtacaccccgtatattagggatattttggtaagttcatctcac 31680985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 48463548 - 48463467
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||||||||||| ||||||||||| |||||||   ||||| ||| |||||||||||||||  ||||||||| ||||||||||    
T  48463548 aaaatgttacataaacaccatttattcatacatttcattgtacatcccatgtattagggatattttggtaagttcatctcac 48463467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 43514787 - 43514703
Alignment:
Q  109 agaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||||||||||||||||||||| |||| || ||||| |||||| ||||  ||||||||||||   ||||||||| ||||||||||    
T  43514787 agaaaaatgttacatgaacaccctttattcctacactccattgtacacttcatgtattagggttattttggtaagttcatctcac 43514703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 190
Target Start/End: Original strand, 27550311 - 27550389
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatct 190  Q
    ||||||||||||||||||| |||| |  ||||| |||||| ||||| |||||||||||||  ||||||||| |||||||    
T  27550311 aaaatgttacatgaacaccctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatct 27550389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 28982920 - 28982839
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| |||| |  ||||||| |||| ||| ||||| |||||||||  ||||||||| ||||||||||    
T  28982920 aaaatgttacatgaacaccctttatttctacaccctattgtacatcccatatattagggatattttggtaagttcatctcac 28982839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 33703143 - 33703224
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| |||| |  |||| |  |||| |||||||||||||||||||  ||||||||| ||||||||||    
T  33703143 aaaatgttacatgaacaccctttatttctacatcttattgtacaccccatgtattagggatattttggtaagttcatctcac 33703224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 193
Target Start/End: Complemental strand, 43949902 - 43949818
Alignment:
Q  110 gaaaaatgttacatgaacaccatttaat-catacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||||||| |||||||||||| ||| || | | |||| ||||| |||||||||||||||||||  ||||||||| ||||||||||    
T  43949902 gaaaaatgatacatgaacacccttttattcctgcacctcattgtacaccccatgtattagggatattttggtaagttcatctcac 43949818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 193
Target Start/End: Complemental strand, 41327643 - 41327560
Alignment:
Q  110 gaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||  ||||| |||| ||| ||||||||||| |||||  ||| | || |||| ||||||||||||||||||||    
T  41327643 gaaaaatgttacatagacaccctttattcacacaccccattgtacaccttatgcactacggacattttggtaaattcatctcac 41327560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 112 - 190
Target Start/End: Original strand, 12496958 - 12497036
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatct 190  Q
    ||||||||| ||||||||| |||| || ||||| |||||| ||| |||||||||||| ||  ||||||||| |||||||    
T  12496958 aaaatgttatatgaacaccctttattcctacactccattgtacatcccatgtattagagatattttggtaagttcatct 12497036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 35017735 - 35017815
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| |||| || || | | ||||| |||||||||||| ||||||  ||||||||| ||||||||||    
T  35017735 aaaatgttacatgaacaccctttattcctatatctcattgtacaccccatgta-tagggatattttggtaagttcatctcac 35017815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 41878408 - 41878489
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||  |||| ||||||||| ||||| |||||| ||  ||||||||  ||||| ||| ||||||||||    
T  41878408 aaaatgttacatgaacactctttattcatacacctcattgtacaccctatccattagggatattttgataagttcatctcac 41878489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 45490411 - 45490330
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||  |||| | ||||| || |||| ||||| |||||||||||||   ||| |||||||||||||||    
T  45490411 aaaatgttacatgaacacattttatttatacatccaattgtacacctcatgtattagggatactttagtaaattcatctcac 45490330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 192
Target Start/End: Complemental strand, 27316811 - 27316731
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctca 192  Q
    ||||||||| | ||||||| |||| || |||||| ||||  ||||||||||||||| |||  ||||||||| |||||||||    
T  27316811 aaaatgttaaacgaacaccctttattcctacacctcattatacaccccatgtattaaggatattttggtaagttcatctca 27316731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 193
Target Start/End: Original strand, 39631100 - 39631184
Alignment:
Q  110 gaaaaatgttacatgaacaccatttaat-catacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||||||| ||||||||| || ||| || | |||||| ||||| ||||| |||||||||||||  ||||||||| ||||||||||    
T  39631100 gaaaaatgatacatgaacccccttttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcac 39631184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 161
Target Start/End: Original strand, 30189269 - 30189324
Alignment:
Q  106 aatagaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccat 161  Q
    ||||| |||||||||||||||||||||||| ||| |||| |||| | |||||||||    
T  30189269 aataggaaaatgttacatgaacaccatttattcacacactccatcgtacaccccat 30189324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 193
Target Start/End: Original strand, 38851513 - 38851596
Alignment:
Q  110 gaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||| | | |||||||||||| |  | || |||| ||||| |||| |||| ||||| ||||||||||||||    
T  38851513 gaaaaatgttacatgaatatcctttaatcatacatcataatgtacactccatgcattatggacattttgataaattcatctcac 38851596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 19879987 - 19880037
Alignment:
Q  143 accccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||| |||| ||||||||| ||||| |||| ||||||||||||||||||||    
T  19879987 accctattgtacaccccatatattatggacattttggtaaattcatctcac 19880037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 190
Target Start/End: Complemental strand, 49229762 - 49229684
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatct 190  Q
    ||||||||| ||||||| | ||||||||||||||| |||| ||||  |||| |||| |||  || ||||||||||||||    
T  49229762 aaaatgttatatgaacatcctttaatcatacaccctattgtacacttcatgcattaaggatattctggtaaattcatct 49229684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 23035982 - 23036063
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||  | |||| || ||||||| |||| |||||| || |||||||||  |||| |||| ||||||||||    
T  23035982 aaaatgttacatgaacctcctttattcctacaccctattgtacaccctatatattagggatatttttgtaagttcatctcac 23036063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 112 - 149
Target Start/End: Complemental strand, 36004202 - 36004165
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccat 149  Q
    ||||||||||||||| ||| ||||||||||||||||||    
T  36004202 aaaatgttacatgaataccctttaatcatacaccccat 36004165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 41847973 - 41848050
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatc 189  Q
    ||||||||||| ||||| | |||  ||| ||||| ||||| |||||||||| ||||| ||| |||||| |||||||||    
T  41847973 aaaatgttacaagaacatccttttttcacacacctcattgtacaccccatgcattagagacattttggcaaattcatc 41848050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 193
Target Start/End: Complemental strand, 23204875 - 23204795
Alignment:
Q  113 aaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||||||||||||||||  |||| || |||| ||||||| ||| || ||||||||||||  |||| |||| ||||| ||||    
T  23204875 aaatgttacatgaacactctttattcctacatcccattgtacatcctatgtattagggatatttttgtaagttcatgtcac 23204795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 1e-24; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 44112679 - 44112760
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| ||||||||||||||| |||| |||||||||| ||||||||| ||||||||| ||||||||||    
T  44112679 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcac 44112760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 48119630 - 48119711
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| ||||||||||||||| |||| |||||||||| |||| |||  ||||||||||||||||||||    
T  48119630 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaattcatctcac 48119711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 107 - 193
Target Start/End: Complemental strand, 45427848 - 45427762
Alignment:
Q  107 atagaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||| ||||||||||||||| ||| ||||||||||||||| |||| |||| ||||| ||||||||| ||||||||| ||||||||||    
T  45427848 ataggaaaatgttacatgaataccttttaatcatacaccctattgtacactccatgcattagggacattttggtaatttcatctcac 45427762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 35003296 - 35003377
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| ||||||||||||||| |||| |||||||||  |||| |||  ||||||||||||||||||||    
T  35003296 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatacattaaggatattttggtaaattcatctcac 35003377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 38113293 - 38113212
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||| ||||||||| ||||||||||||||| |||| |||||||||| ||||  ||| ||||||||||||||||||||    
T  38113293 aaaatgttatatgaacaccctttaatcatacaccctattgtacaccccatgcattaatgacattttggtaaattcatctcac 38113212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 41065155 - 41065236
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| |||||||||||||||  ||| |||||||||| ||||||| | ||||||||| ||||||||||    
T  41065155 aaaatgttacatgaacaccctttaatcatacaccctgttgtacaccccatgcattaggggcattttggtaatttcatctcac 41065236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 43571184 - 43571103
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| |||| || |||||| ||||| |||||||||||||||||||  ||||||||| ||||||||||    
T  43571184 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcac 43571103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 193
Target Start/End: Complemental strand, 2497664 - 2497579
Alignment:
Q  108 tagaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||||||||||||||| ||||||||||| |||||||  |||||| ||||||||| ||||| |||  ||||||||| ||||||||||    
T  2497664 tagaaaaatgttacataaacaccatttattcatacattccattgtacaccccatatattaaggatattttggtaagttcatctcac 2497579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 5489778 - 5489859
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| |||| || |||| ||||||| |||||| ||||||||||||  ||||||||| ||||||||||    
T  5489778 aaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 5489859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 38335920 - 38336001
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| ||||||||||||||  |||| ||| |||||| |||| |||  ||||||||||||||||||||    
T  38335920 aaaatgttacatgaacaccctttaatcatacaccttattgtacatcccatgcattaaggatattttggtaaattcatctcac 38336001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 35000211 - 35000130
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| ||||||||||||| | |||| | ||  |||||||||||||| ||||| |||||| |||||||    
T  35000211 aaaatgttacatgaacaccttttaatcatacactctattgtatacttcatgtattagggacattttgataaatttatctcac 35000130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 37814780 - 37814861
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||||||||||| |||||| |||| ||||||| | ||||| ||||||||||||||| |||  ||||||||||||||| ||||    
T  37814780 aaaatgttacataaacaccctttattcatacatctcattgtacaccccatgtattaaggatattttggtaaattcatttcac 37814861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 45639830 - 45639749
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||  |||||||||||| || |||| |||||||||  |||| |||  ||||||||||||||||||||    
T  45639830 aaaatgttacatgaacactctttaatcatacatcctattgtacaccccatacattaaggatattttggtaaattcatctcac 45639749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 46168385 - 46168466
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| |||||||||| | || |||| |||||| ||| |||| |||  ||||||||||||||||||||    
T  46168385 aaaatgttacatgaacaccctttaatcatatatcctattgtacacccaatgcattaaggatattttggtaaattcatctcac 46168466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 192
Target Start/End: Complemental strand, 750408 - 750323
Alignment:
Q  107 atagaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctca 192  Q
    |||| |||||||||| |||||||| ||   || |||||||||||| ||||||||||||| |||||  ||||| |||||||||||||    
T  750408 ataggaaaatgttacgtgaacacccttatttcctacaccccattgtacaccccatgtatcagggatattttgataaattcatctca 750323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 45705827 - 45705908
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||| ||||||||| ||||||||||||  | |||| |||| ||||| |||| |||| ||||| ||||||||||||||    
T  45705827 aaaatgttatatgaacaccctttaatcatacattctattgtacactccatgcattatggacattttgataaattcatctcac 45705908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 48499060 - 48498979
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||  |||| |  ||||| |||||| ||||| |||||||||||||  ||||||||| ||||||||||    
T  48499060 aaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatctcac 48498979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 193
Target Start/End: Original strand, 4401324 - 4401411
Alignment:
Q  107 atagaaaaatgttacatgaacac-catttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||| ||||||||||| | |||| || |||||  ||||| |||||||||||||||| ||  ||||||||| ||||||||||    
T  4401324 atagaaaaatgatacatgaacactcttttattcctacacttcattgtacaccccatgtattagagatattttggtaagttcatctcac 4401411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 167
Target Start/End: Original strand, 14427349 - 14427404
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtatta 167  Q
    ||||||||||||||||||| ||||||||||||||| |||| ||||| |||| ||||    
T  14427349 aaaatgttacatgaacaccctttaatcatacaccctattgtacacctcatgcatta 14427404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 23989622 - 23989540
Alignment:
Q  112 aaaatgttacatgaacaccatttaat-catacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| ||| || ||||||| | |||| | |||| ||||||||||||  |||||||||||| |||||||    
T  23989622 aaaatgttacatgaacacccttttattcatacactcaattgtataccctatgtattagggatattttggtaaatttatctcac 23989540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 112 - 182
Target Start/End: Complemental strand, 24769597 - 24769527
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaa 182  Q
    |||||||| |||||||||| |||| |  ||||| |||||| |||||||||||||||||||  |||||||||    
T  24769597 aaaatgtttcatgaacaccttttatttctacactccattgtacaccccatgtattagggatattttggtaa 24769527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 5e-24; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 5256994 - 5257078
Alignment:
Q  109 agaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||| ||||||||||| ||||||| ||||||| |||||||||||||||||||  ||||||||| ||||||||||    
T  5256994 agaaaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaatttcatctcac 5257078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 102 - 193
Target Start/End: Original strand, 7617125 - 7617216
Alignment:
Q  102 tattaatagaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||||| || ||||||||||||||||||| |||| |||||||| |||||  |||||||||||||||||||  ||||||||| ||||||||||    
T  7617125 tattaaaaggaaaatgttacatgaacaccctttattcatacactccattatacaccccatgtattagggatattttggtaagttcatctcac 7617216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 106 - 193
Target Start/End: Original strand, 17208070 - 17208157
Alignment:
Q  106 aatagaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||| |||||||||| |||||||| |||||||||||||   |||| |||||||||| |||| |||| ||||||||||||||||||||    
T  17208070 aataggaaaatgttacgtgaacaccctttaatcatacactttattgtacaccccatgcattaaggacattttggtaaattcatctcac 17208157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 112 - 182
Target Start/End: Complemental strand, 33855141 - 33855071
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaa 182  Q
    ||||||||||||||||||| |||| || |||||||||||| ||||||||||||||||| || |||||||||    
T  33855141 aaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattaggaacattttggtaa 33855071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 2614747 - 2614666
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| |||| || |||| ||||||| |||||| ||||||||||||  ||||||||| ||||||||||    
T  2614747 aaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 2614666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 22512307 - 22512388
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| |||| || ||||| |||||| |||| ||||||||||||||  ||||||||| ||||||||||    
T  22512307 aaaatgttacatgaacaccctttattcctacactccattgtacactccatgtattagggatattttggtaagttcatctcac 22512388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 32473492 - 32473411
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| ||||||||||||||  |||| ||||| |||| ||||||||  ||||||||| ||||||||||    
T  32473492 aaaatgttacatgaacaccctttaatcatacaccttattgtacaccacatgcattagggatattttggtaatttcatctcac 32473411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 41334761 - 41334680
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| |||| ||||||||| ||||  |||||| ||||||||||||  ||||||||| ||||||||||    
T  41334761 aaaatgttacatgaacaccctttattcatacacctcattatacaccctatgtattagggatattttggtaagttcatctcac 41334680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 18033984 - 18034065
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| |||| || ||||| |||||| |||||| ||||||||||||  |||| |||| ||||||||||    
T  18033984 aaaatgttacatgaacaccctttattcctacactccattgtacaccctatgtattagggatatttttgtaagttcatctcac 18034065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 38470581 - 38470662
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||||||||||| |||||| |||| |||||||  |||||| ||||||||||||||| |||  ||||||||||||||| ||||    
T  38470581 aaaatgttacataaacaccctttattcatacattccattgtacaccccatgtattaaggatattttggtaaattcatttcac 38470662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 33801471 - 33801552
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||| | |||| |  |||||||||||| |||| ||||||||||||||  |||| |||| ||||||||||    
T  33801471 aaaatgttacatgaacatcctttatttctacaccccattgtacactccatgtattagggatattttagtaagttcatctcac 33801552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 110 - 168
Target Start/End: Complemental strand, 25915087 - 25915029
Alignment:
Q  110 gaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattag 168  Q
    ||||||||||||||||||||| |||| || |||||| ||||| |||||| |||||||||    
T  25915087 gaaaaatgttacatgaacaccctttattcctacacctcattgtacacccaatgtattag 25915029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 30622816 - 30622736
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||| | ||||||||||||||| |||| | | |||||| |||| |||  |||||||||||| |||||||    
T  30622816 aaaatgttacatgaacatcctttaatcatacaccctattgta-agcccatgcattaaggatattttggtaaatttatctcac 30622736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 35554 - 35473
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||||||||||| |||||||||||||||||||||  |||| |||||||||| ||||||||| | ||||||||||||||||||    
T  35554 aaaatgttacataaacaccatttaatcatacaccatattgtacaccccatgcattagggacatattggtaaattcatctcac 35473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 3e-22; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 40236921 - 40237002
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| |||||||||||| || |||| |||||||||| ||||||||| ||||||||| ||||||||||    
T  40236921 aaaatgttacatgaacaccctttaatcatacatcctattgtacaccccatgcattagggacattttggtaatttcatctcac 40237002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 33384872 - 33384954
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacacccc-attgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||| |||||||||||||||||| |||| | || ||||| ||||||||| ||||||||||||||||||||    
T  33384872 aaaatgttacatgaacatcatttaatcatacacccctattgtatactccatgcattagggacattttggtaaattcatctcac 33384954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 110 - 193
Target Start/End: Original strand, 10573749 - 10573832
Alignment:
Q  110 gaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||||||||||||| |||||| |||| ||||||| || |||| ||||||||||||||||| |  ||||||||||||||||||||    
T  10573749 gaaaaatgttacataaacaccctttattcatacatcctattgtacaccccatgtattaggaatattttggtaaattcatctcac 10573832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 106 - 193
Target Start/End: Original strand, 44326174 - 44326261
Alignment:
Q  106 aatagaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||||||||||||||||| |||||| |||| ||||||| ||||||| ||||| ||| |||||||||  ||||||||| ||||||||||    
T  44326174 aatagaaaaatgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatattttggtaagttcatctcac 44326261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 193
Target Start/End: Complemental strand, 4638301 - 4638216
Alignment:
Q  108 tagaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||||||| |||| |||||||| | |||| ||||||||| ||||| |||  ||||||||| ||||||||||    
T  4638301 tagaaaaatgttacatgaacaccttttattcatacactcaattgtacaccccatatattatggatattttggtaagttcatctcac 4638216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 5194329 - 5194248
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||||||||||||||||||||||| ||||||||| ||||| |||||| |||| ||| |||  ||||| ||||||||||||||    
T  5194329 aaaatgttacatgaacaccatttattcatacacctcattgtacaccctatgttttaaggatattttgataaattcatctcac 5194248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 24001110 - 24001029
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| |||| || |||| ||||||| |||||| ||||||||||||  ||||||||| ||||||||||    
T  24001110 aaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 24001029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 31513289 - 31513370
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||  ||||||||||||||| |||| | |||||||| |||| |||  ||||||||||||||||||||    
T  31513289 aaaatgttacatgaacactctttaatcatacaccctattgtataccccatgcattaaggatattttggtaaattcatctcac 31513370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 42538529 - 42538448
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| |||| || |||| ||||||| |||||| ||||||||||||  ||||||||| ||||||||||    
T  42538529 aaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 42538448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 43343725 - 43343641
Alignment:
Q  109 agaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||||||||||||||||||| |||||| |  ||||||| |||| |||||||||||||||||||  ||||| ||| ||||||||||    
T  43343725 agaaaaatgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattttgataagttcatctcac 43343641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 106 - 193
Target Start/End: Original strand, 43317439 - 43317526
Alignment:
Q  106 aatagaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||| |||||||||||||||||||||||| ||||||||| ||||| ||| || |||  |||||||  ||||| ||||||||||||||    
T  43317439 aataggaaaatgttacatgaacaccatttattcatacacctcattgtacatcctatgctttagggatattttgataaattcatctcac 43317526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 110 - 193
Target Start/End: Complemental strand, 44417034 - 44416951
Alignment:
Q  110 gaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| |||||| |  ||||||| |||| |||||||||||||||||||  ||||| ||| ||||||||||    
T  44417034 gaaaaatgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattttgataagttcatctcac 44416951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 113 - 190
Target Start/End: Complemental strand, 26898499 - 26898422
Alignment:
Q  113 aaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatct 190  Q
    |||||||||||||||||| |||| |||||||||| |||| |||  ||||||||||||||  ||||||||| |||||||    
T  26898499 aaatgttacatgaacaccttttattcatacacccaattgtacattccatgtattagggatattttggtaagttcatct 26898422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 27535329 - 27535248
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| ||||||||||||| | |||| |||| |||||| |||  ||| ||||||||| ||||||||||    
T  27535329 aaaatgttacatgaacaccctttaatcatacactctattgtacactccatgtgttaaagacattttggtaatttcatctcac 27535248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 31408731 - 31408650
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| ||||||||||||| | |||| ||| |||||| |||| |||  ||||||||||||||| ||||    
T  31408731 aaaatgttacatgaacaccctttaatcatacactctattgtacatcccatgcattaaggatattttggtaaattcatttcac 31408650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 35069723 - 35069804
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||  |||| || |||||| ||||| ||||| |||||||||||||  ||||||||| ||||||||||    
T  35069723 aaaatgttacatgaacactctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcac 35069804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 119 - 190
Target Start/End: Complemental strand, 32029908 - 32029837
Alignment:
Q  119 tacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatct 190  Q
    ||||| |||||  |||| || |||||||||||| |||||||||||||||||||  |||||||||||||||||    
T  32029908 tacataaacactttttattcctacaccccattgtacaccccatgtattagggatattttggtaaattcatct 32029837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 112 - 171
Target Start/End: Original strand, 39998410 - 39998469
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattaggga 171  Q
    ||||||||||||||||||  |||||||||||| || |||| |||||||||||||||||||    
T  39998410 aaaatgttacatgaacacattttaatcatacatcctattgtacaccccatgtattaggga 39998469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 193
Target Start/End: Complemental strand, 16180459 - 16180374
Alignment:
Q  107 atagaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||| ||||||||||| || |||| ||||||| |||||||| ||||||   |  ||||||||||||||||||||    
T  16180459 atagaaaaatgttacatcaacaccatttattcctaca-cccattgtacaccccacgtattataaatattttggtaaattcatctcac 16180374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 5015397 - 5015478
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||  |||| |  ||||| |||||| ||||| |||||||||||||  ||||||||| ||||||||||    
T  5015397 aaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatctcac 5015478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 5811022 - 5810941
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||||||||||||| |||| |||| || |||||||||||| |||||| || |||||||||  ||||| ||| ||||||||||    
T  5811022 aaaatgttacatgaccaccctttattcctacaccccattgtacaccctatatattagggatattttgataagttcatctcac 5810941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 42972854 - 42972935
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||||||||| |||||| | |||| || ||||| |||||| ||||| |||||||||||||  ||||||||| ||||||||||    
T  42972854 aaaatgttacctgaacatcctttattcctacactccattgtacacctcatgtattagggatattttggtaagttcatctcac 42972935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 112 - 167
Target Start/End: Original strand, 41861676 - 41861731
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtatta 167  Q
    ||||||||||||||||||| |||| |||||||||| |||  |||||| ||||||||    
T  41861676 aaaatgttacatgaacaccctttattcatacacccaattatacaccctatgtatta 41861731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 193
Target Start/End: Complemental strand, 24280699 - 24280613
Alignment:
Q  107 atagaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||| |||||||||| |||||||| |||| |||||||||| |||  ||| |||||| | |||  |  ||||||||||||||||||||    
T  24280699 ataggaaaatgttacgtgaacaccctttattcatacaccctattctacatcccatgcactagaaatattttggtaaattcatctcac 24280613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 193
Target Start/End: Complemental strand, 38160649 - 38160596
Alignment:
Q  140 tacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||| |||||| |||||||||||||||||||  |||| |||| ||||||||||    
T  38160649 tacactccattgtacaccccatgtattagggatattttagtaacttcatctcac 38160596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 3e-22; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 9434126 - 9434207
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| ||||||||||||| | |||| |||||||||| ||||||||| ||||||||| ||||||||||    
T  9434126 aaaatgttacatgaacaccctttaatcatacactctattgtacaccccatgcattagggacattttggtaatttcatctcac 9434207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 40808867 - 40808948
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||||||||||| ||||||||||| || |||||||||||| |||||||||||||||||||  ||||||||| ||||||||||    
T  40808867 aaaatgttacatcaacaccatttattcctacaccccattgtacaccccatgtattagggatattttggtaagttcatctcac 40808948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 4190363 - 4190282
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| ||||||||||||||| |||| |||||  ||||||||| ||  ||||||||||||||||||||    
T  4190363 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccttatgtattagagatattttggtaaattcatctcac 4190282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 10457990 - 10457909
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| ||||||||||||||| |||| |||||||||| |||| |||  |||||||||||| |||||||    
T  10457990 aaaatgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaatttatctcac 10457909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 25996270 - 25996351
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| |||||||||||| |  |||| ||||||||| ||||| |||| ||||||||||||||||||||    
T  25996270 aaaatgttacatgaacaccctttaatcatacatcttattgtacaccccatatattaaggacattttggtaaattcatctcac 25996351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 42100690 - 42100771
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| |||| || |||||| ||||| |||||||||||||||||||  ||||||||| ||||||||||    
T  42100690 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcac 42100771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 45127026 - 45126945
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||||||||||| |||||| |||| ||||||| ||||||| |||||||||||||||||||  ||||||||| ||||||||||    
T  45127026 aaaatgttacataaacaccctttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcac 45126945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 46941055 - 46941136
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| |||| || |||| | ||||| |||||||||||||||||||  ||||||||| ||||||||||    
T  46941055 aaaatgttacatgaacaccctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctcac 46941136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 54237098 - 54237179
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| |||| || |||| ||||||| |||||| ||||||||||||  ||||||||| ||||||||||    
T  54237098 aaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 54237179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 110 - 193
Target Start/End: Original strand, 27748563 - 27748646
Alignment:
Q  110 gaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||||| |||| ||||||||| ||||  |||||  ||||||||||||  ||||||||| ||||||||||    
T  27748563 gaaaaatgttacatgaacaccttttattcatacacctcattatacaccttatgtattagggatattttggtaagttcatctcac 27748646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 193
Target Start/End: Original strand, 25413678 - 25413764
Alignment:
Q  107 atagaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||| ||||||||||||||||||| |||| || |||||||||||| |||||  ||||||||||||  |||| |||| ||||||||||    
T  25413678 ataggaaaatgttacatgaacaccctttattcctacaccccattgtacaccttatgtattagggatatttttgtaagttcatctcac 25413764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 193
Target Start/End: Complemental strand, 53581961 - 53581875
Alignment:
Q  107 atagaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||||||||||||||||||||||  |||| |||||||| |||||| ||| || ||||||||||||  ||||| ||| ||||||||||    
T  53581961 atagaaaaatgttacatgaacactctttattcatacactccattgtacatcctatgtattagggatattttgataagttcatctcac 53581875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 24688500 - 24688419
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| |||| |  ||||| |||||| |||||| ||||||||||||  ||||||||| ||||||||||    
T  24688500 aaaatgttacatgaacaccctttatttctacactccattgtacaccctatgtattagggatattttggtaagttcatctcac 24688419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 36150132 - 36150213
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||| ||| |||| ||||||||||||||  |||||| |||||| |||||  ||||||||| ||||||||||    
T  36150132 aaaatgttacatgaataccctttattcatacaccccattatacaccctatgtatcagggatattttggtaagttcatctcac 36150213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 40480751 - 40480832
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| |||| |||||  |||||||| ||| || ||||||||||||  ||||||||| ||||||||||    
T  40480751 aaaatgttacatgaacaccctttattcatatgccccattgtacatcctatgtattagggatattttggtaagttcatctcac 40480832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 42394517 - 42394436
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| |||| || ||||  |||||| |||||| ||||||||||||  ||||||||| ||||||||||    
T  42394517 aaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcac 42394436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 54246246 - 54246165
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| |||| || |||||||||||| |||||| ||||||||| ||  |||| |||| ||||||||||    
T  54246246 aaaatgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagagatatttttgtaagttcatctcac 54246165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 34791831 - 34791912
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| ||||||||||||||  |||| | ||| |||| ||||||||| ||||  ||| ||||||||||    
T  34791831 aaaatgttacatgaacaccctttaatcatacaccatattgtaaacctcatgcattagggacattttaataatttcatctcac 34791912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 51757595 - 51757676
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||| |||||| |||||| ||||||||||||||| |||| ||||| |||| |||| |||| |||| |||| ||||||||||    
T  51757595 aaaatattacataaacaccctttaatcatacaccctattgtacacctcatgcattatggacattttagtaatttcatctcac 51757676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 52628075 - 52627994
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||||||||| |||||||| |||||||||||| || |||| ||||| |||| |||| | |  ||||||||||||||||||||    
T  52628075 aaaatgttacgtgaacaccctttaatcatacatcctattgtacacctcatgcattaagtatattttggtaaattcatctcac 52627994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 53273782 - 53273701
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||| ||||||| |||||| || || ||| ||||| ||| |||||||||||||||  ||||||||| ||||||||||    
T  53273782 aaaatgttatatgaacatcatttattcctatacctcattgtacatcccatgtattagggatattttggtaagttcatctcac 53273701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 47191123 - 47191043
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| |||| || |||||| ||||| ||| |||||||||||| ||  ||||| ||| ||||||||||    
T  47191123 aaaatgttacatgaacaccctttattcctacacctcattgtaca-cccatgtattagagatattttgataagttcatctcac 47191043  T

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Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 29558330 - 29558251
Alignment:
Q  114 aatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||| ||||||||| |||| ||||||| | ||||| |||||| || ||||||| |  | ||||||||||||||||||    
T  29558330 aatgttatatgaacaccctttattcatacatctcattgtacaccctatatattaggaatatattggtaaattcatctcac 29558251  T

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Target: scaffold0003 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 110 - 193
Target Start/End: Complemental strand, 45819 - 45736
Alignment:
Q  110 gaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||||| ||||||||||||||| |||| ||| || |||||||| |||  ||||||||||||||||||||    
T  45819 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattttggtaaattcatctcac 45736  T

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Target: scaffold0385 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 11253 - 11334
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||| ||||||||||  |||| ||||||||||||||| ||||||||| |||||||||  ||||||||| ||||||||||    
T  11253 aaaatgtcacatgaacacactttattcatacaccccattgtacaccccatatattagggatattttggtaagttcatctcac 11334  T

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Target: scaffold0119 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 687 - 768
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| |||| || |||||| ||||| ||||| |||||||||||||  ||||||||| ||||||||||    
T  687 aaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcac 768  T

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Target: scaffold0038 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 112657 - 112738
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    ||||||||||||||||||| |||| || ||||  |||||| |||||| ||||||||||||  ||||||||| ||||||||||    
T  112657 aaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcac 112738  T

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Target: scaffold0187 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 193
Target Start/End: Complemental strand, 14291 - 14205
Alignment:
Q  107 atagaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||| ||||||||||||||||||| |||| |  |||||||||||| ||| || ||||||||||||  |||| |||| ||||||||||    
T  14291 ataggaaaatgttacatgaacaccctttatttctacaccccattgtacatcctatgtattagggatatttttgtaagttcatctcac 14205  T

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Target: scaffold0187; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 193
Target Start/End: Complemental strand, 24619 - 24533
Alignment:
Q  107 atagaaaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatctcac 193  Q
    |||| ||||||||||||||||||| |||| |  |||||||||||| ||| || ||||||||||||  |||| |||| ||||||||||    
T  24619 ataggaaaatgttacatgaacaccctttatttctacaccccattgtacatcctatgtattagggatatttttgtaagttcatctcac 24533  T

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Target: scaffold0157 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 112 - 190
Target Start/End: Complemental strand, 23519 - 23441
Alignment:
Q  112 aaaatgttacatgaacaccatttaatcatacaccccattgcacaccccatgtattagggacgttttggtaaattcatct 190  Q
    ||||||||| ||||||||| |||| || ||||| |||||| ||| |||||||||||| ||  ||||||||| |||||||    
T  23519 aaaatgttatatgaacaccctttattcctacactccattgtacatcccatgtattagagatattttggtaagttcatct 23441  T

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