View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15493_high_4 (Length: 430)

Name: NF15493_high_4
Description: NF15493
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15493_high_4
NF15493_high_4
[»] chr3 (35 HSPs)
chr3 (42-415)||(3865356-3865732)
chr3 (137-179)||(10335323-10335365)
chr3 (137-186)||(10954932-10954981)
chr3 (137-186)||(55401055-55401104)
chr3 (137-188)||(10318062-10318113)
chr3 (137-186)||(8587051-8587100)
chr3 (137-180)||(16000052-16000095)
chr3 (137-180)||(26492241-26492284)
chr3 (143-186)||(40052318-40052361)
chr3 (144-186)||(4987321-4987363)
chr3 (137-179)||(14829670-14829712)
chr3 (143-185)||(21479104-21479146)
chr3 (137-187)||(41961679-41961729)
chr3 (137-186)||(10268516-10268565)
chr3 (137-178)||(14216872-14216913)
chr3 (137-178)||(14223001-14223042)
chr3 (143-180)||(14747547-14747584)
chr3 (143-180)||(20503451-20503488)
chr3 (137-186)||(28917981-28918030)
chr3 (149-186)||(34910309-34910346)
chr3 (137-180)||(15796330-15796373)
chr3 (135-186)||(18426927-18426978)
chr3 (135-186)||(25948917-25948968)
chr3 (137-178)||(750656-750698)
chr3 (140-186)||(28812499-28812544)
chr3 (42-84)||(28918017-28918059)
chr3 (42-84)||(49651787-49651829)
chr3 (141-186)||(2620083-2620128)
chr3 (137-186)||(3164055-3164104)
chr3 (149-186)||(14209105-14209142)
chr3 (137-186)||(14979161-14979210)
chr3 (141-178)||(32400743-32400780)
chr3 (137-178)||(33359741-33359782)
chr3 (146-186)||(26508099-26508139)
chr3 (44-84)||(26508126-26508166)
[»] chr8 (24 HSPs)
chr8 (137-185)||(36450785-36450833)
chr8 (140-186)||(15816159-15816205)
chr8 (137-186)||(22651956-22652005)
chr8 (137-185)||(29510335-29510383)
chr8 (137-186)||(13436994-13437043)
chr8 (140-185)||(24196628-24196673)
chr8 (137-180)||(18170518-18170561)
chr8 (137-180)||(18634086-18634129)
chr8 (140-179)||(22204622-22204661)
chr8 (140-179)||(25192384-25192423)
chr8 (137-186)||(20873049-20873098)
chr8 (141-186)||(30271321-30271366)
chr8 (40-84)||(4298885-4298929)
chr8 (137-180)||(4673461-4673504)
chr8 (140-179)||(5813575-5813614)
chr8 (42-84)||(4948668-4948710)
chr8 (42-84)||(22651992-22652034)
chr8 (42-84)||(25566857-25566899)
chr8 (140-186)||(41838153-41838199)
chr8 (137-186)||(2572086-2572135)
chr8 (36-84)||(22197737-22197785)
chr8 (144-180)||(22595981-22596017)
chr8 (144-180)||(24727790-24727826)
chr8 (142-186)||(27101500-27101544)
[»] chr6 (35 HSPs)
chr6 (137-185)||(8777004-8777052)
chr6 (137-178)||(8365557-8365598)
chr6 (137-186)||(16833288-16833337)
chr6 (137-186)||(17841619-17841668)
chr6 (137-186)||(34595114-34595163)
chr6 (137-180)||(12696304-12696347)
chr6 (137-179)||(3398599-3398641)
chr6 (137-186)||(426544-426593)
chr6 (137-186)||(853889-853938)
chr6 (137-186)||(10770704-10770753)
chr6 (137-186)||(16766677-16766726)
chr6 (137-185)||(9107401-9107449)
chr6 (137-180)||(7938096-7938139)
chr6 (137-180)||(17302536-17302579)
chr6 (144-186)||(7801186-7801228)
chr6 (140-186)||(7930288-7930334)
chr6 (138-180)||(15489768-15489810)
chr6 (137-179)||(28152079-28152121)
chr6 (137-186)||(31959139-31959188)
chr6 (144-180)||(1681745-1681781)
chr6 (137-180)||(7977866-7977909)
chr6 (42-84)||(426515-426557)
chr6 (137-175)||(9027158-9027196)
chr6 (42-84)||(10770675-10770717)
chr6 (143-185)||(12868706-12868748)
chr6 (42-84)||(16766713-16766755)
chr6 (137-175)||(19044444-19044482)
chr6 (138-184)||(24809523-24809569)
chr6 (42-84)||(34595150-34595192)
chr6 (143-180)||(3209367-3209404)
chr6 (137-186)||(9658859-9658908)
chr6 (137-186)||(20371140-20371189)
chr6 (145-186)||(24115877-24115918)
chr6 (50-82)||(17302575-17302607)
chr6 (138-186)||(33001319-33001367)
[»] scaffold0018 (1 HSPs)
scaffold0018 (137-180)||(178855-178898)
[»] chr5 (33 HSPs)
chr5 (135-186)||(14674247-14674298)
chr5 (137-186)||(19552573-19552622)
chr5 (137-186)||(21191086-21191135)
chr5 (137-186)||(41995451-41995500)
chr5 (137-180)||(4105237-4105280)
chr5 (137-180)||(15382457-15382500)
chr5 (137-180)||(21522730-21522773)
chr5 (137-180)||(21533296-21533339)
chr5 (137-180)||(22013394-22013437)
chr5 (143-186)||(31084309-31084352)
chr5 (144-186)||(6247609-6247651)
chr5 (141-179)||(10298553-10298591)
chr5 (137-179)||(36642799-36642841)
chr5 (140-186)||(39698524-39698570)
chr5 (138-186)||(19579682-19579730)
chr5 (146-186)||(33178014-33178054)
chr5 (149-180)||(30135305-30135336)
chr5 (42-84)||(6247638-6247680)
chr5 (42-84)||(8420043-8420085)
chr5 (42-84)||(10298585-10298627)
chr5 (42-84)||(21191057-21191099)
chr5 (41-83)||(21351905-21351947)
chr5 (50-84)||(31084339-31084373)
chr5 (137-186)||(6770523-6770572)
chr5 (137-186)||(9449449-9449498)
chr5 (137-186)||(13287429-13287478)
chr5 (142-179)||(21351942-21351979)
chr5 (137-186)||(21576775-21576824)
chr5 (137-173)||(15410491-15410527)
chr5 (42-82)||(15884006-15884046)
chr5 (143-187)||(30183535-30183579)
chr5 (142-186)||(42893345-42893389)
chr5 (40-84)||(42893376-42893420)
[»] scaffold0306 (1 HSPs)
scaffold0306 (137-186)||(13380-13429)
[»] scaffold0152 (1 HSPs)
scaffold0152 (137-186)||(21898-21947)
[»] scaffold0103 (1 HSPs)
scaffold0103 (137-186)||(51791-51840)
[»] chr1 (42 HSPs)
chr1 (141-185)||(37598816-37598860)
chr1 (143-186)||(22881646-22881689)
chr1 (137-180)||(46348419-46348462)
chr1 (137-186)||(398795-398844)
chr1 (137-178)||(18556494-18556535)
chr1 (137-185)||(40917731-40917779)
chr1 (138-185)||(42359480-42359527)
chr1 (137-180)||(48450623-48450666)
chr1 (42-84)||(38078662-38078704)
chr1 (137-179)||(48040499-48040541)
chr1 (137-186)||(1486739-1486788)
chr1 (143-180)||(6427447-6427484)
chr1 (141-186)||(9103624-9103669)
chr1 (137-186)||(38078691-38078740)
chr1 (138-186)||(2896151-2896199)
chr1 (40-84)||(40258932-40258976)
chr1 (147-186)||(113289-113328)
chr1 (137-180)||(5944261-5944304)
chr1 (137-180)||(13011252-13011295)
chr1 (139-186)||(22515917-22515964)
chr1 (143-186)||(24577216-24577259)
chr1 (137-180)||(29144394-29144437)
chr1 (143-186)||(32461493-32461536)
chr1 (140-186)||(1705022-1705068)
chr1 (140-186)||(1815240-1815286)
chr1 (144-186)||(10572619-10572661)
chr1 (137-179)||(14359558-14359600)
chr1 (42-84)||(18337345-18337387)
chr1 (42-84)||(24577187-24577229)
chr1 (142-180)||(31672931-31672969)
chr1 (137-186)||(1262864-1262913)
chr1 (139-180)||(9033044-9033085)
chr1 (137-186)||(16812523-16812572)
chr1 (137-186)||(34298416-34298465)
chr1 (137-186)||(47989478-47989526)
chr1 (144-180)||(609494-609530)
chr1 (42-82)||(1815275-1815315)
chr1 (143-187)||(3490419-3490463)
chr1 (143-187)||(17831560-17831604)
chr1 (42-82)||(28663626-28663666)
chr1 (42-82)||(47989515-47989555)
chr1 (42-82)||(51410043-51410083)
[»] scaffold0053 (1 HSPs)
scaffold0053 (137-180)||(8778-8821)
[»] chr7 (33 HSPs)
chr7 (137-180)||(24105658-24105701)
chr7 (137-186)||(11061106-11061155)
chr7 (41-84)||(7438722-7438765)
chr7 (135-186)||(18215216-18215267)
chr7 (137-180)||(27945021-27945064)
chr7 (135-186)||(35861942-35861993)
chr7 (137-186)||(24339622-24339671)
chr7 (137-186)||(43027499-43027548)
chr7 (142-186)||(25481887-25481931)
chr7 (345-396)||(3990744-3990795)
chr7 (143-186)||(9408364-9408407)
chr7 (137-180)||(13557780-13557823)
chr7 (137-180)||(13770671-13770714)
chr7 (149-180)||(25822647-25822678)
chr7 (41-84)||(48438562-48438605)
chr7 (137-175)||(10042917-10042955)
chr7 (148-186)||(11665470-11665508)
chr7 (42-84)||(24339658-24339700)
chr7 (135-173)||(37742501-37742539)
chr7 (345-402)||(3985932-3985989)
chr7 (137-186)||(5409866-5409915)
chr7 (143-180)||(8234132-8234169)
chr7 (145-186)||(11272618-11272659)
chr7 (137-186)||(11722128-11722177)
chr7 (137-186)||(26733284-26733333)
chr7 (137-178)||(33994192-33994233)
chr7 (143-175)||(6630953-6630985)
chr7 (42-82)||(18039017-18039057)
chr7 (42-82)||(21560521-21560561)
chr7 (138-186)||(22868023-22868071)
chr7 (142-186)||(32308105-32308149)
chr7 (144-180)||(40287392-40287428)
chr7 (136-180)||(43249972-43250016)
[»] chr4 (25 HSPs)
chr4 (137-180)||(30298926-30298969)
chr4 (137-180)||(30327794-30327837)
chr4 (137-178)||(19482648-19482689)
chr4 (137-186)||(23293016-23293065)
chr4 (138-186)||(35158015-35158063)
chr4 (137-179)||(12797374-12797416)
chr4 (137-179)||(40481617-40481659)
chr4 (137-186)||(12895304-12895353)
chr4 (143-180)||(24543967-24544004)
chr4 (143-179)||(34306840-34306876)
chr4 (140-179)||(4383351-4383390)
chr4 (137-180)||(21945483-21945526)
chr4 (141-180)||(49431009-49431048)
chr4 (140-186)||(11651164-11651210)
chr4 (42-84)||(12895117-12895159)
chr4 (137-179)||(28720856-28720898)
chr4 (137-186)||(12895146-12895194)
chr4 (140-181)||(20633468-20633509)
chr4 (137-186)||(27706207-27706256)
chr4 (43-84)||(29205460-29205501)
chr4 (141-186)||(36635308-36635353)
chr4 (50-82)||(28084540-28084572)
chr4 (148-180)||(32273562-32273594)
chr4 (42-82)||(42640547-42640587)
chr4 (143-179)||(50280867-50280903)
[»] chr2 (30 HSPs)
chr2 (137-180)||(15972853-15972896)
chr2 (137-180)||(19536434-19536477)
chr2 (137-186)||(37558957-37559006)
chr2 (138-186)||(24894370-24894418)
chr2 (137-180)||(12940971-12941014)
chr2 (137-180)||(14996260-14996303)
chr2 (137-180)||(18841049-18841092)
chr2 (137-180)||(20539710-20539753)
chr2 (137-180)||(21374735-21374778)
chr2 (137-180)||(30335397-30335440)
chr2 (143-186)||(38117189-38117232)
chr2 (137-179)||(6940235-6940277)
chr2 (142-180)||(27460011-27460049)
chr2 (137-186)||(15657844-15657893)
chr2 (137-178)||(18421943-18421984)
chr2 (137-186)||(30404880-30404929)
chr2 (42-82)||(5040752-5040792)
chr2 (143-187)||(26769497-26769541)
chr2 (137-180)||(21624246-21624289)
chr2 (137-180)||(23058479-23058522)
chr2 (137-176)||(36756384-36756423)
chr2 (42-81)||(37558996-37559035)
chr2 (146-180)||(12668459-12668493)
chr2 (137-179)||(20473302-20473344)
chr2 (137-186)||(21616742-21616791)
chr2 (137-186)||(30717560-30717609)
chr2 (137-186)||(34337206-34337255)
chr2 (143-180)||(37986765-37986802)
chr2 (42-82)||(2438720-2438760)
chr2 (42-82)||(19536398-19536438)
[»] scaffold0223 (1 HSPs)
scaffold0223 (137-186)||(20152-20201)
[»] scaffold0003 (1 HSPs)
scaffold0003 (137-186)||(241574-241623)
[»] scaffold0246 (1 HSPs)
scaffold0246 (137-179)||(19556-19598)
[»] scaffold0361 (1 HSPs)
scaffold0361 (149-186)||(14522-14559)
[»] scaffold0027 (1 HSPs)
scaffold0027 (137-186)||(46662-46711)
[»] scaffold0019 (1 HSPs)
scaffold0019 (143-180)||(71709-71746)
[»] scaffold0122 (1 HSPs)
scaffold0122 (149-180)||(8002-8033)
[»] scaffold0007 (1 HSPs)
scaffold0007 (137-180)||(225304-225347)
[»] scaffold0652 (1 HSPs)
scaffold0652 (139-185)||(493-539)
[»] scaffold0450 (1 HSPs)
scaffold0450 (144-178)||(8673-8707)
[»] scaffold0311 (1 HSPs)
scaffold0311 (137-178)||(10509-10550)
[»] scaffold0227 (1 HSPs)
scaffold0227 (149-186)||(7341-7378)
[»] scaffold0011 (1 HSPs)
scaffold0011 (141-186)||(17779-17824)
[»] scaffold0722 (1 HSPs)
scaffold0722 (140-180)||(7068-7108)
[»] scaffold0025 (1 HSPs)
scaffold0025 (42-82)||(23788-23828)
[»] scaffold0021 (1 HSPs)
scaffold0021 (44-84)||(130498-130538)
[»] scaffold0004 (1 HSPs)
scaffold0004 (140-180)||(92790-92830)


Alignment Details
Target: chr3 (Bit Score: 270; Significance: 1e-151; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 42 - 415
Target Start/End: Complemental strand, 3865732 - 3865356
Alignment:
Q  42 gacaccgccacttgtaattacattgaattatgtgagtttttcatatagtataaaaatcgttaataatctatgaagcacgggcacgggca--aactcagac 139  Q
    ||||||| |||||||||||| | |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||  |||||||||    
T  3865732 gacaccgacacttgtaattatactgaattatgtgagtttttcatatagtataagaatcgttaataacctatgaagcacgggcacaggcacaaactcagac 3865633  T
Q  140 acggacactgacacgccgacacaactaataatttgaaaaaaccacatttacaagtgtcggtgtcgcacacgatatgtgtcccggtgtgtccgacaccgag 239  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||  |||||||||||||||||    
T  3865632 acggacactgacacgccgacacagctaataatttgaaaaaaccacatttgcaagtgtcggtgtcgcactcgacatgtgtcctagtgtgtccgacaccgag 3865533  T
Q  240 atacgcctgatacgatggatgtttgtggttcatagatgtaaaaactcaaaacgacacctaatttgagac-gagtactaattttacgtggcttgannnnnn 338  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||          
T  3865532 atacgcgtgatacgatggatgtttgtgcttcatagatgtaaaaactcaaaacgacacctaatttgagacggagtactaattttacgtggcttgatttttt 3865433  T
Q  339 nnaacctttgagcaatggcgttatttcgtaaaacggggaagctactcaagaattctgctgtcaatcatgatttatct 415  Q
      || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3865432 ttaagctttgagcaatggcgttatttggtaaaacggggaagctactcaagaattctgctgtcaatcatgatttatct 3865356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 137 - 179
Target Start/End: Complemental strand, 10335365 - 10335323
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaa 179  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  10335365 gacacggacactgacacgccgacacaactaataatttgaaaaa 10335323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 10954932 - 10954981
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  10954932 gacacgaacactgacacgccgacacaactaataatttgaaaaaatcacat 10954981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 55401055 - 55401104
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  55401055 gacacggacactgatacgccgacacaactaataatttgaaaaaatcacat 55401104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 188
Target Start/End: Complemental strand, 10318113 - 10318062
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacattt 188  Q
    |||||||||||||||||||||||||| ||||||||||||||||  |||||||    
T  10318113 gacacggacactgacacgccgacacagctaataatttgaaaaagtcacattt 10318062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 8587100 - 8587051
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||||||||||||||||||||| ||| ||||||||||||| |||||    
T  8587100 gacacggacactgacacgccgacacatctagtaatttgaaaaaatcacat 8587051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 16000095 - 16000052
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||    
T  16000095 gacacagacactgacacgccgacacaactaataatttaaaaaaa 16000052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 26492284 - 26492241
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    |||||||||||||||||||||||| | |||||||||||||||||    
T  26492284 gacacggacactgacacgccgacagagctaataatttgaaaaaa 26492241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 143 - 186
Target Start/End: Original strand, 40052318 - 40052361
Alignment:
Q  143 gacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||||||||||||||| ||||||||||||||||| |||||    
T  40052318 gacactgacacgccgacacagctaataatttgaaaaaatcacat 40052361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 186
Target Start/End: Complemental strand, 4987363 - 4987321
Alignment:
Q  144 acactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    ||||||||||||||||||| ||||||||||||||||| |||||    
T  4987363 acactgacacgccgacacagctaataatttgaaaaaatcacat 4987321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 14829670 - 14829712
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaa 179  Q
    ||||| |||||||||||||||||||| ||||||||||||||||    
T  14829670 gacacagacactgacacgccgacacagctaataatttgaaaaa 14829712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 185
Target Start/End: Original strand, 21479104 - 21479146
Alignment:
Q  143 gacactgacacgccgacacaactaataatttgaaaaaaccaca 185  Q
    |||||||||||||||||||| ||||||||||||||||| ||||    
T  21479104 gacactgacacgccgacacagctaataatttgaaaaaatcaca 21479146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 187
Target Start/End: Complemental strand, 41961729 - 41961679
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacatt 187  Q
    ||||| ||||||||||||||| |||||||||||||||||||| | ||||||    
T  41961729 gacacagacactgacacgccgtcacaactaataatttgaaaatatcacatt 41961679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 10268565 - 10268516
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||| |||||||||||||||||||||  |||||||||||||||| |||||    
T  10268565 gacatggacactgacacgccgacacagttaataatttgaaaaaatcacat 10268516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 14216872 - 14216913
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaa 178  Q
    |||||||||||||||||| |||||||||||||||||| ||||    
T  14216872 gacacggacactgacacgtcgacacaactaataattttaaaa 14216913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 14223001 - 14223042
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaa 178  Q
    |||||||||||||||||| |||||||||||||||||| ||||    
T  14223001 gacacggacactgacacgtcgacacaactaataattttaaaa 14223042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 180
Target Start/End: Original strand, 14747547 - 14747584
Alignment:
Q  143 gacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    |||||||||||||||||||| |||||||||||||||||    
T  14747547 gacactgacacgccgacacagctaataatttgaaaaaa 14747584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 180
Target Start/End: Original strand, 20503451 - 20503488
Alignment:
Q  143 gacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    |||||||||||||||||||||| |||||||||||||||    
T  20503451 gacactgacacgccgacacaacaaataatttgaaaaaa 20503488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 28917981 - 28918030
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||| ||||||||||||||| | ||||||||||||||||| |||||    
T  28917981 gacacggaaactgacacgccgacatagctaataatttgaaaaaatcacat 28918030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 149 - 186
Target Start/End: Original strand, 34910309 - 34910346
Alignment:
Q  149 gacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||||||||||||||||||||||||||| |||||    
T  34910309 gacacgccgacacaactaataatttgaaaaaatcacat 34910346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 15796373 - 15796330
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    |||||||||| |||||||||||||||  ||||||||||||||||    
T  15796373 gacacggacaatgacacgccgacacagttaataatttgaaaaaa 15796330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 18426927 - 18426978
Alignment:
Q  135 cagacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||| |||||||| ||||||||||||| ||||||||||| |||||| |||||    
T  18426927 cagatacggacacggacacgccgacaccactaataatttcaaaaaatcacat 18426978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 135 - 186
Target Start/End: Complemental strand, 25948968 - 25948917
Alignment:
Q  135 cagacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||||||||||||| ||||| ||  ||||||||||||||||| |||||    
T  25948968 cagacacggacactgacatgccgatacggctaataatttgaaaaaatcacat 25948917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 750698 - 750656
Alignment:
Q  137 gacacggacact-gacacgccgacacaactaataatttgaaaa 178  Q
    |||||||||||| |||||| |||||||||||||||||||||||    
T  750698 gacacggacacttgacacggcgacacaactaataatttgaaaa 750656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 28812499 - 28812544
Alignment:
Q  140 acggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||| |||||||||||||||||||||||||||| ||| |||||    
T  28812499 acggacac-gacacgccgacacaactaataatttgaagaaatcacat 28812544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 28918059 - 28918017
Alignment:
Q  42 gacaccgccacttgtaattacattgaattatgtgagtttttca 84  Q
    ||||||| |||||||||||||| |||||||||||| |||||||    
T  28918059 gacaccgacacttgtaattacactgaattatgtgattttttca 28918017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 49651787 - 49651829
Alignment:
Q  42 gacaccgccacttgtaattacattgaattatgtgagtttttca 84  Q
    ||||||| |||||||||||||| |||||||||||| |||||||    
T  49651787 gacaccgacacttgtaattacagtgaattatgtgattttttca 49651829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 186
Target Start/End: Complemental strand, 2620128 - 2620083
Alignment:
Q  141 cggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    ||||||||||||||||||||| |||||| |||||| |||| |||||    
T  2620128 cggacactgacacgccgacaccactaatcatttgagaaaatcacat 2620083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 3164104 - 3164055
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||||| || |||| ||||||| ||||||||||||||||| |||||    
T  3164104 gacacggacaatggcacgtcgacacagctaataatttgaaaaaatcacat 3164055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 186
Target Start/End: Original strand, 14209105 - 14209142
Alignment:
Q  149 gacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    ||||||||||||||||||||||||| |||||| |||||    
T  14209105 gacacgccgacacaactaataattttaaaaaatcacat 14209142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 14979161 - 14979210
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||| ||||| || |||||||||||| ||||||||||||||||| |||||    
T  14979161 gacaaggacaatggcacgccgacacagctaataatttgaaaaaatcacat 14979210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 178
Target Start/End: Complemental strand, 32400780 - 32400743
Alignment:
Q  141 cggacactgacacgccgacacaactaataatttgaaaa 178  Q
    |||||||||||||| ||||||| |||||||||||||||    
T  32400780 cggacactgacacggcgacacagctaataatttgaaaa 32400743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 33359741 - 33359782
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaa 178  Q
    ||||| ||||||||||||| |||||| |||||||||||||||    
T  33359741 gacacagacactgacacgctgacacagctaataatttgaaaa 33359782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 146 - 186
Target Start/End: Original strand, 26508099 - 26508139
Alignment:
Q  146 actgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||||| |||||| ||||||||||||||||| |||||    
T  26508099 actgacacgctgacacagctaataatttgaaaaaatcacat 26508139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 26508166 - 26508126
Alignment:
Q  44 caccgccacttgtaattacattgaattatgtgagtttttca 84  Q
    ||||| |||||||||||||| |||||||||||| |||||||    
T  26508166 caccgacacttgtaattacactgaattatgtgattttttca 26508126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 2e-16; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 137 - 185
Target Start/End: Complemental strand, 36450833 - 36450785
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccaca 185  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  36450833 gacacggacactgacacgccgacacaactaataatttgaaaaaatcaca 36450785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 15816205 - 15816159
Alignment:
Q  140 acggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  15816205 acggacactgacacgccgacacaactaataatttgaaaaaatcacat 15816159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 22651956 - 22652005
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  22651956 gacacggacactgacacgccgacacagctaataatttgaaaaaatcacat 22652005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 137 - 185
Target Start/End: Complemental strand, 29510383 - 29510335
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccaca 185  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  29510383 gacacggacactgacacgccgacacagctaataatttgaaaaaatcaca 29510335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 13437043 - 13436994
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||| ||||||||||||||||||||| ||||||||||||||||| |||||    
T  13437043 gacatggacactgacacgccgacacagctaataatttgaaaaaatcacat 13436994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 140 - 185
Target Start/End: Complemental strand, 24196673 - 24196628
Alignment:
Q  140 acggacactgacacgccgacacaactaataatttgaaaaaaccaca 185  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||    
T  24196673 acggacaccgacacgccgacacaactaataatttgaaaaaatcaca 24196628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 18170561 - 18170518
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||    
T  18170561 gacacggacactgacacgccgacacaattaaaaatttgaaaaaa 18170518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 18634129 - 18634086
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||    
T  18634129 gacacggacactgacacgccgacacaattaaaaatttgaaaaaa 18634086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 140 - 179
Target Start/End: Original strand, 22204622 - 22204661
Alignment:
Q  140 acggacactgacacgccgacacaactaataatttgaaaaa 179  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  22204622 acggacactgacacgccgacacaactaataatttaaaaaa 22204661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 140 - 179
Target Start/End: Complemental strand, 25192423 - 25192384
Alignment:
Q  140 acggacactgacacgccgacacaactaataatttgaaaaa 179  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  25192423 acggacactgacacgccgacacagctaataatttgaaaaa 25192384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 20873049 - 20873098
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||||||||||||||||||| |  |||||||||||||||| |||||    
T  20873049 gacacggacactgacacgccgacatagataataatttgaaaaaatcacat 20873098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 186
Target Start/End: Complemental strand, 30271366 - 30271321
Alignment:
Q  141 cggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||||||||||||||||| ||||| ||||||||||| |||||    
T  30271366 cggacactgacacgccgacacagctaatcatttgaaaaaatcacat 30271321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 4298885 - 4298929
Alignment:
Q  40 ctgacaccgccacttgtaattacattgaattatgtgagtttttca 84  Q
    ||||||||| |||||||||||||||| |||||||||| |||||||    
T  4298885 ctgacaccgacacttgtaattacattaaattatgtgattttttca 4298929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 4673504 - 4673461
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    ||||| ||||||||||||||||||||  ||||||||||||||||    
T  4673504 gacacagacactgacacgccgacacagataataatttgaaaaaa 4673461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 179
Target Start/End: Original strand, 5813575 - 5813614
Alignment:
Q  140 acggacactgacacgccgacacaactaataatttgaaaaa 179  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  5813575 acggacacggacacgccgacacagctaataatttgaaaaa 5813614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 4948710 - 4948668
Alignment:
Q  42 gacaccgccacttgtaattacattgaattatgtgagtttttca 84  Q
    ||||||| |||||||||||||| |||||||||||| |||||||    
T  4948710 gacaccgacacttgtaattacactgaattatgtgattttttca 4948668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 22652034 - 22651992
Alignment:
Q  42 gacaccgccacttgtaattacattgaattatgtgagtttttca 84  Q
    ||||||| |||||||||||| |||||||||||||| |||||||    
T  22652034 gacaccgacacttgtaattatattgaattatgtgattttttca 22651992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 25566899 - 25566857
Alignment:
Q  42 gacaccgccacttgtaattacattgaattatgtgagtttttca 84  Q
    ||||||| |||||||||||||| |||||||||||| |||||||    
T  25566899 gacaccgacacttgtaattacactgaattatgtgattttttca 25566857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 41838199 - 41838153
Alignment:
Q  140 acggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    ||||||||||||||| ||||||| |||||||||| |||||| |||||    
T  41838199 acggacactgacacgtcgacacagctaataatttaaaaaaatcacat 41838153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 2572135 - 2572086
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||| || |||||| ||||||| ||||||||||||||||| |||||    
T  2572135 gacacggataccgacacgtcgacacacctaataatttgaaaaaatcacat 2572086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 84
Target Start/End: Original strand, 22197737 - 22197785
Alignment:
Q  36 gacactgacaccgccacttgtaattacattgaattatgtgagtttttca 84  Q
    ||||||||||| | |||||||||||||| | |||||||||| |||||||    
T  22197737 gacactgacactgacacttgtaattacactaaattatgtgaatttttca 22197785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 22595981 - 22596017
Alignment:
Q  144 acactgacacgccgacacaactaataatttgaaaaaa 180  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  22595981 acactgacacgccgacacagctaataatttaaaaaaa 22596017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 24727826 - 24727790
Alignment:
Q  144 acactgacacgccgacacaactaataatttgaaaaaa 180  Q
    ||||||||||| | |||||||||||||||||||||||    
T  24727826 acactgacacgtcaacacaactaataatttgaaaaaa 24727790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 27101500 - 27101544
Alignment:
Q  142 ggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    ||||| ||||||||||||||  ||||||||||||||||| |||||    
T  27101500 ggacattgacacgccgacaccgctaataatttgaaaaaatcacat 27101544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 137 - 185
Target Start/End: Complemental strand, 8777052 - 8777004
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccaca 185  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  8777052 gacacggacactgacacgccgacacaactaataatttgaaaaaatcaca 8777004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 8365598 - 8365557
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaa 178  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  8365598 gacacggacactgacacgccgacacaactaataatttgaaaa 8365557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 16833288 - 16833337
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  16833288 gacacagacactgacacgccgacacaactaataatttgaaaaaatcacat 16833337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 17841668 - 17841619
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  17841668 gacacggacactgacacgccgacacagctaataatttgaaaaaatcacat 17841619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 34595114 - 34595163
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  34595114 gacacggacaatgacacgccgacacaactaataatttgaaaaaatcacat 34595163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 180
Target Start/End: Original strand, 12696304 - 12696347
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  12696304 gacacggacactgacacgccgacacagctaataatttgaaaaaa 12696347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 3398599 - 3398641
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaa 179  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  3398599 gacacggacactgacacgccgacacagctaataatttgaaaaa 3398641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 426593 - 426544
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    ||||||||||||||||||||||||||  |||||||||||||||| |||||    
T  426593 gacacggacactgacacgccgacacagttaataatttgaaaaaatcacat 426544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 853938 - 853889
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    ||||||||  |||||||||||||||||||||||||||||||||| |||||    
T  853938 gacacggatgctgacacgccgacacaactaataatttgaaaaaatcacat 853889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 10770753 - 10770704
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||| ||||||||||||||| ||||||||||||||||||||||| |||||    
T  10770753 gacatggacactgacacgccaacacaactaataatttgaaaaaatcacat 10770704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 16766677 - 16766726
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||| ||||||||||||||||||||| ||||||||||||||||| |||||    
T  16766677 gacatggacactgacacgccgacacagctaataatttgaaaaaatcacat 16766726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 185
Target Start/End: Complemental strand, 9107449 - 9107401
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccaca 185  Q
    |||||||||||| ||||||||||||| ||||||||||||||||| ||||    
T  9107449 gacacggacactaacacgccgacacagctaataatttgaaaaaatcaca 9107401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 180
Target Start/End: Original strand, 7938096 - 7938139
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    |||| ||||||||||||||||||||| |||||||||||||||||    
T  7938096 gacatggacactgacacgccgacacagctaataatttgaaaaaa 7938139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 180
Target Start/End: Original strand, 17302536 - 17302579
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  17302536 gacacgaacactgacacgctgacacaactaataatttgaaaaaa 17302579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 186
Target Start/End: Complemental strand, 7801228 - 7801186
Alignment:
Q  144 acactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    ||||| ||||||||||||||||||||||||||||||| |||||    
T  7801228 acactaacacgccgacacaactaataatttgaaaaaatcacat 7801186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 7930288 - 7930334
Alignment:
Q  140 acggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    ||||||||||||| |||||||||| |||||||||||||||| |||||    
T  7930288 acggacactgacatgccgacacaattaataatttgaaaaaatcacat 7930334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 180
Target Start/End: Complemental strand, 15489810 - 15489768
Alignment:
Q  138 acacggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    ||||||||||| ||||| |||||||||||||||||||||||||    
T  15489810 acacggacactaacacgtcgacacaactaataatttgaaaaaa 15489768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 28152079 - 28152121
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaa 179  Q
    |||||||||||||||||||||||| | ||||||||||||||||    
T  28152079 gacacggacactgacacgccgacaaagctaataatttgaaaaa 28152121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 31959139 - 31959188
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||| |||||||||||||| |||| ||||||||||||||||| |||||    
T  31959139 gacacgaacactgacacgccgtcacagctaataatttgaaaaaatcacat 31959188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 1681745 - 1681781
Alignment:
Q  144 acactgacacgccgacacaactaataatttgaaaaaa 180  Q
    ||||| |||||||||||||||||||||||||||||||    
T  1681745 acactaacacgccgacacaactaataatttgaaaaaa 1681781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 7977909 - 7977866
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    |||| ||| ||||||||||||||||| |||||||||||||||||    
T  7977909 gacatggatactgacacgccgacacagctaataatttgaaaaaa 7977866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 426515 - 426557
Alignment:
Q  42 gacaccgccacttgtaattacattgaattatgtgagtttttca 84  Q
    ||||||| |||||||||||||||| |||||||||| |||||||    
T  426515 gacaccgacacttgtaattacatttaattatgtgattttttca 426557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 175
Target Start/End: Original strand, 9027158 - 9027196
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttga 175  Q
    |||||||||||||||||||||||||  ||||||||||||    
T  9027158 gacacggacactgacacgccgacaccgctaataatttga 9027196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 10770675 - 10770717
Alignment:
Q  42 gacaccgccacttgtaattacattgaattatgtgagtttttca 84  Q
    ||||||| |||||||||||||| |||||||||||| |||||||    
T  10770675 gacaccgacacttgtaattacactgaattatgtgattttttca 10770717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 185
Target Start/End: Complemental strand, 12868748 - 12868706
Alignment:
Q  143 gacactgacacgccgacacaactaataatttgaaaaaaccaca 185  Q
    ||||||||||||||||||||  |||||||||||||||| ||||    
T  12868748 gacactgacacgccgacacagttaataatttgaaaaaatcaca 12868706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 16766755 - 16766713
Alignment:
Q  42 gacaccgccacttgtaattacattgaattatgtgagtttttca 84  Q
    ||||||| |||||||||||||| |||||||||||| |||||||    
T  16766755 gacaccgacacttgtaattacactgaattatgtgattttttca 16766713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 175
Target Start/End: Original strand, 19044444 - 19044482
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttga 175  Q
    |||| |||||||||||||||||||| |||||||||||||    
T  19044444 gacatggacactgacacgccgacacgactaataatttga 19044482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 24809569 - 24809523
Alignment:
Q  138 acacggacactgacacgccgacacaactaataatttgaaaaaaccac 184  Q
    ||||||||||||| |||||||||   |||||||||||||||||||||    
T  24809569 acacggacactgatacgccgacatcgctaataatttgaaaaaaccac 24809523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 34595192 - 34595150
Alignment:
Q  42 gacaccgccacttgtaattacattgaattatgtgagtttttca 84  Q
    ||||||| |||||||||||||| |||||||||||| |||||||    
T  34595192 gacaccgacacttgtaattacactgaattatgtgattttttca 34595150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 180
Target Start/End: Original strand, 3209367 - 3209404
Alignment:
Q  143 gacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  3209367 gacacagacacgccgacacagctaataatttgaaaaaa 3209404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 9658859 - 9658908
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||||||||||||||||||||  |||||||||| | |||| |||||    
T  9658859 gacacggacactgacacgccgacaccgctaataatttaagaaaatcacat 9658908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 20371189 - 20371140
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||||| ||||||||||||||  |||||||||||| |||| |||||    
T  20371189 gacacggacattgacacgccgacaccgctaataatttgagaaaatcacat 20371140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 186
Target Start/End: Complemental strand, 24115918 - 24115877
Alignment:
Q  145 cactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    ||||||||||| ||||||||||||||||| |||||| |||||    
T  24115918 cactgacacgctgacacaactaataatttcaaaaaatcacat 24115877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 50 - 82
Target Start/End: Complemental strand, 17302607 - 17302575
Alignment:
Q  50 cacttgtaattacattgaattatgtgagttttt 82  Q
    ||||||||||||||||||||||||||| |||||    
T  17302607 cacttgtaattacattgaattatgtgatttttt 17302575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 138 - 186
Target Start/End: Complemental strand, 33001367 - 33001319
Alignment:
Q  138 acacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||| || ||||||||||||||  ||||||||||||||||| |||||    
T  33001367 acacggtcaatgacacgccgacactgctaataatttgaaaaaatcacat 33001319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 178898 - 178855
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  178898 gacacggacactgacacgccgacacaactaataatttgaaaaaa 178855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 7e-16; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 14674247 - 14674298
Alignment:
Q  135 cagacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  14674247 cagacacggacactgacacgccgacacagctaataatttgaaaaaatcacat 14674298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 19552622 - 19552573
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    ||||||||||||||||||||||||||  |||||||||||||||| |||||    
T  19552622 gacacggacactgacacgccgacacagttaataatttgaaaaaatcacat 19552573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 21191135 - 21191086
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||||||||||| ||||||||| ||||||||||||||||| |||||    
T  21191135 gacacggacactgacatgccgacacagctaataatttgaaaaaatcacat 21191086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 41995451 - 41995500
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    ||||| |||||||||||||||||||||||||||||| ||||||| |||||    
T  41995451 gacacagacactgacacgccgacacaactaataattcgaaaaaatcacat 41995500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 180
Target Start/End: Original strand, 4105237 - 4105280
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    |||||||| ||||||||||||||| |||||||||||||||||||    
T  4105237 gacacggatactgacacgccgacataactaataatttgaaaaaa 4105280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 180
Target Start/End: Original strand, 15382457 - 15382500
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    |||||||||| ||||||||||||||| |||||||||||||||||    
T  15382457 gacacggacaatgacacgccgacacagctaataatttgaaaaaa 15382500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 180
Target Start/End: Original strand, 21522730 - 21522773
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    |||||||||||||||||||||||||| |||||||||| ||||||    
T  21522730 gacacggacactgacacgccgacacagctaataattttaaaaaa 21522773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 180
Target Start/End: Original strand, 21533296 - 21533339
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    |||||||||||||||||||||||||| |||||||||| ||||||    
T  21533296 gacacggacactgacacgccgacacagctaataattttaaaaaa 21533339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 180
Target Start/End: Original strand, 22013394 - 22013437
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    |||||||||||||||||||||||||| ||||||||||| |||||    
T  22013394 gacacggacactgacacgccgacacagctaataatttggaaaaa 22013437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 143 - 186
Target Start/End: Original strand, 31084309 - 31084352
Alignment:
Q  143 gacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||||||||||||||| ||||||||||||||||| |||||    
T  31084309 gacactgacacgccgacacagctaataatttgaaaaaatcacat 31084352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 186
Target Start/End: Original strand, 6247609 - 6247651
Alignment:
Q  144 acactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    ||||||||||||||||||| ||||||||||||||||| |||||    
T  6247609 acactgacacgccgacacatctaataatttgaaaaaatcacat 6247651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 141 - 179
Target Start/End: Original strand, 10298553 - 10298591
Alignment:
Q  141 cggacactgacacgccgacacaactaataatttgaaaaa 179  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  10298553 cggacactaacacgccgacacaactaataatttgaaaaa 10298591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 179
Target Start/End: Complemental strand, 36642841 - 36642799
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaa 179  Q
    ||||||||||||||||||||||||||  |||||||||||||||    
T  36642841 gacacggacactgacacgccgacacagttaataatttgaaaaa 36642799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 39698524 - 39698570
Alignment:
Q  140 acggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||||||||||| |||||| ||||||||||||||||| |||||    
T  39698524 acggacactgacacgctgacacagctaataatttgaaaaaatcacat 39698570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 19579682 - 19579730
Alignment:
Q  138 acacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    ||||||||||||| ||||||||||| |||||||||||| |||| |||||    
T  19579682 acacggacactgatacgccgacacagctaataatttgagaaaatcacat 19579730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 186
Target Start/End: Original strand, 33178014 - 33178054
Alignment:
Q  146 actgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||||||||||||||||||||||| |||||| |||||    
T  33178014 actgacacgccgacacaactaataatttaaaaaaatcacat 33178054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 180
Target Start/End: Original strand, 30135305 - 30135336
Alignment:
Q  149 gacacgccgacacaactaataatttgaaaaaa 180  Q
    ||||||||||||||||||||||||||||||||    
T  30135305 gacacgccgacacaactaataatttgaaaaaa 30135336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 6247680 - 6247638
Alignment:
Q  42 gacaccgccacttgtaattacattgaattatgtgagtttttca 84  Q
    ||||||| |||||||||||||| |||||||||||| |||||||    
T  6247680 gacaccgacacttgtaattacactgaattatgtgattttttca 6247638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 8420085 - 8420043
Alignment:
Q  42 gacaccgccacttgtaattacattgaattatgtgagtttttca 84  Q
    ||||||| ||||||||||||||||||||||||| | |||||||    
T  8420085 gacaccgacacttgtaattacattgaattatgttattttttca 8420043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 10298627 - 10298585
Alignment:
Q  42 gacaccgccacttgtaattacattgaattatgtgagtttttca 84  Q
    ||||||| ||||||||||||||||| ||||||||| |||||||    
T  10298627 gacaccgacacttgtaattacattgtattatgtgactttttca 10298585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 21191057 - 21191099
Alignment:
Q  42 gacaccgccacttgtaattacattgaattatgtgagtttttca 84  Q
    ||||||| |||||||||||||| |||||||||||| |||||||    
T  21191057 gacaccgacacttgtaattacactgaattatgtgattttttca 21191099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 83
Target Start/End: Original strand, 21351905 - 21351947
Alignment:
Q  41 tgacaccgccacttgtaattacattgaattatgtgagtttttc 83  Q
    |||||||| |||||||||||||| |||||||||||| ||||||    
T  21351905 tgacaccgacacttgtaattacactgaattatgtgactttttc 21351947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 84
Target Start/End: Complemental strand, 31084373 - 31084339
Alignment:
Q  50 cacttgtaattacattgaattatgtgagtttttca 84  Q
    ||||||||||||||||||||||||||| |||||||    
T  31084373 cacttgtaattacattgaattatgtgattttttca 31084339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 6770523 - 6770572
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    ||||||||||||||||| | ||||||||||||||||| | |||| |||||    
T  6770523 gacacggacactgacacactgacacaactaataatttaagaaaatcacat 6770572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 9449449 - 9449498
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    ||||||||||||| ||||||||||| | ||||||||||| |||| |||||    
T  9449449 gacacggacactggcacgccgacaccaataataatttgagaaaatcacat 9449498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 13287478 - 13287429
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||||||| ||||| |||||||  |||||||||||||||| |||||    
T  13287478 gacacggacactaacacgtcgacacagataataatttgaaaaaatcacat 13287429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 179
Target Start/End: Complemental strand, 21351979 - 21351942
Alignment:
Q  142 ggacactgacacgccgacacaactaataatttgaaaaa 179  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  21351979 ggacactgacacaccgacacaactaataattggaaaaa 21351942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 21576824 - 21576775
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||| ||||||| ||||| ||||| ||||||||||||||||| |||||    
T  21576824 gacacgaacactgatacgccaacacagctaataatttgaaaaaatcacat 21576775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 173
Target Start/End: Complemental strand, 15410527 - 15410491
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataattt 173  Q
    |||||||||||||||||||||||||  ||||||||||    
T  15410527 gacacggacactgacacgccgacaccgctaataattt 15410491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 15884046 - 15884006
Alignment:
Q  42 gacaccgccacttgtaattacattgaattatgtgagttttt 82  Q
    ||||||| |||||||||||||| |||||||||||| |||||    
T  15884046 gacaccgacacttgtaattacactgaattatgtgatttttt 15884006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 30183535 - 30183579
Alignment:
Q  143 gacactgacacgccgacacaactaataatttgaaaaaaccacatt 187  Q
    |||||||| | ||||||||||||||||||||||||| | ||||||    
T  30183535 gacactgatatgccgacacaactaataatttgaaaatatcacatt 30183579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 42893345 - 42893389
Alignment:
Q  142 ggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||| ||||| |||||||| ||||||||||||||||| |||||    
T  42893345 ggacacggacacaccgacacagctaataatttgaaaaaatcacat 42893389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 42893420 - 42893376
Alignment:
Q  40 ctgacaccgccacttgtaattacattgaattatgtgagtttttca 84  Q
    ||||||||| |||||||||||||| || ||||||||| |||||||    
T  42893420 ctgacaccgacacttgtaattacactggattatgtgattttttca 42893376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 13380 - 13429
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  13380 gacacggacactgacacgccgacacaactaataatttgagaaaatcacat 13429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 21947 - 21898
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  21947 gacacggacactgacacgccgacacaactaataatttgagaaaatcacat 21898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 51791 - 51840
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  51791 gacacggacactgacacgccgacacagctaataatttgaaaaaatcacat 51840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 185
Target Start/End: Original strand, 37598816 - 37598860
Alignment:
Q  141 cggacactgacacgccgacacaactaataatttgaaaaaaccaca 185  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  37598816 cggacactgacacgccgacacaactaataatttgaaaaaatcaca 37598860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 186
Target Start/End: Complemental strand, 22881689 - 22881646
Alignment:
Q  143 gacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  22881689 gacactgacacgccgacacaactaataatttgaaaaaatcacat 22881646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 46348462 - 46348419
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  46348462 gacacggacactgacacgccgacacagctaataatttgaaaaaa 46348419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 398844 - 398795
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||||||||||||||||||||  ||||||||||||||||| |||||    
T  398844 gacacggacactgacacgccgacaccgctaataatttgaaaaaatcacat 398795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 18556535 - 18556494
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaa 178  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  18556535 gacacggacactgacacgccgacacagctaataatttgaaaa 18556494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 185
Target Start/End: Original strand, 40917731 - 40917779
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccaca 185  Q
    |||||||| ||||||||||||||||| ||||||||||||||||| ||||    
T  40917731 gacacggatactgacacgccgacacagctaataatttgaaaaaatcaca 40917779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 138 - 185
Target Start/End: Complemental strand, 42359527 - 42359480
Alignment:
Q  138 acacggacactgacacgccgacacaactaataatttgaaaaaaccaca 185  Q
    |||||||||||||||||| |||||| ||||||||||||||||| ||||    
T  42359527 acacggacactgacacgctgacacatctaataatttgaaaaaatcaca 42359480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 48450666 - 48450623
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    |||||||||||||||||||| ||||| |||||||||||||||||    
T  48450666 gacacggacactgacacgccaacacagctaataatttgaaaaaa 48450623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 38078662 - 38078704
Alignment:
Q  42 gacaccgccacttgtaattacattgaattatgtgagtttttca 84  Q
    ||||||| ||||||||||||||||||||||||||| |||||||    
T  38078662 gacaccgacacttgtaattacattgaattatgtgattttttca 38078704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 179
Target Start/End: Complemental strand, 48040541 - 48040499
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaa 179  Q
    ||||||||||||||||||||||||||  |||||||||||||||    
T  48040541 gacacggacactgacacgccgacacagataataatttgaaaaa 48040499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 1486788 - 1486739
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||| |||||||||| |||||| ||||||||||||||||| |||||    
T  1486788 gacacggatactgacacgctgacacagctaataatttgaaaaaatcacat 1486739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 180
Target Start/End: Original strand, 6427447 - 6427484
Alignment:
Q  143 gacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    |||||||||| |||||||||||||||||||||||||||    
T  6427447 gacactgacatgccgacacaactaataatttgaaaaaa 6427484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 186
Target Start/End: Original strand, 9103624 - 9103669
Alignment:
Q  141 cggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    ||||||||||||||||||||||  |||||||||||||||| |||||    
T  9103624 cggacactgacacgccgacacagttaataatttgaaaaaatcacat 9103669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 38078740 - 38078691
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||| ||||||||||| ||||||| ||||||||||||||||| |||||    
T  38078740 gacacgaacactgacacgtcgacacagctaataatttgaaaaaatcacat 38078691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 186
Target Start/End: Complemental strand, 2896199 - 2896151
Alignment:
Q  138 acacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    ||||||||||||||||||||||||  |||||||||||| |||| |||||    
T  2896199 acacggacactgacacgccgacaccgctaataatttgagaaaatcacat 2896151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 40258932 - 40258976
Alignment:
Q  40 ctgacaccgccacttgtaattacattgaattatgtgagtttttca 84  Q
    ||||||||| |||||||||||||| |||||||||||| |||||||    
T  40258932 ctgacaccgacacttgtaattacactgaattatgtgattttttca 40258976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 186
Target Start/End: Original strand, 113289 - 113328
Alignment:
Q  147 ctgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||||||||||| ||||||||||||||||| |||||    
T  113289 ctgacacgccgacacagctaataatttgaaaaaatcacat 113328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 180
Target Start/End: Original strand, 5944261 - 5944304
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    ||||| ||||||||||||||| |||| |||||||||||||||||    
T  5944261 gacacagacactgacacgccgccacagctaataatttgaaaaaa 5944304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 13011295 - 13011252
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    |||||| ||||||||| ||||||||| |||||||||||||||||    
T  13011295 gacacgaacactgacatgccgacacagctaataatttgaaaaaa 13011252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 186
Target Start/End: Complemental strand, 22515964 - 22515917
Alignment:
Q  139 cacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    ||||||||| ||||||| |||||| ||||||||||||||||| |||||    
T  22515964 cacggacacggacacgcagacacagctaataatttgaaaaaatcacat 22515917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 186
Target Start/End: Complemental strand, 24577259 - 24577216
Alignment:
Q  143 gacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    ||||| ||||||| |||||||||||||||||||||||| |||||    
T  24577259 gacacggacacgctgacacaactaataatttgaaaaaatcacat 24577216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 29144437 - 29144394
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    ||||| |||||||| ||||||||||| |||||||||||||||||    
T  29144437 gacactgacactgatacgccgacacagctaataatttgaaaaaa 29144394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 186
Target Start/End: Complemental strand, 32461536 - 32461493
Alignment:
Q  143 gacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||| |||||||||| |||||||||||||||||||||| |||||    
T  32461536 gacagtgacacgccggcacaactaataatttgaaaaaatcacat 32461493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 1705068 - 1705022
Alignment:
Q  140 acggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||| ||||| |||||||| ||||||||||||||||| |||||    
T  1705068 acggacaccgacacaccgacacatctaataatttgaaaaaatcacat 1705022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 1815240 - 1815286
Alignment:
Q  140 acggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||||||||||||||||||| |||| |||| |||||| |||||    
T  1815240 acggacactgacacgccgacacaaataattattttaaaaaatcacat 1815286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 186
Target Start/End: Complemental strand, 10572661 - 10572619
Alignment:
Q  144 acactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||||||||||||| ||||||||||||| |||| |||||    
T  10572661 acactgacacgccgacaccactaataatttgagaaaatcacat 10572619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 179
Target Start/End: Complemental strand, 14359600 - 14359558
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaa 179  Q
    ||||| ||||| |||||||||||||| ||||||||||||||||    
T  14359600 gacacagacacggacacgccgacacagctaataatttgaaaaa 14359558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 18337387 - 18337345
Alignment:
Q  42 gacaccgccacttgtaattacattgaattatgtgagtttttca 84  Q
    ||||||| |||||||||||||| |||||||||||| |||||||    
T  18337387 gacaccgacacttgtaattacactgaattatgtgattttttca 18337345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 24577187 - 24577229
Alignment:
Q  42 gacaccgccacttgtaattacattgaattatgtgagtttttca 84  Q
    ||||||| |||||||||||||| |||||||||||| |||||||    
T  24577187 gacaccgacacttgtaattacactgaattatgtgattttttca 24577229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 180
Target Start/End: Complemental strand, 31672969 - 31672931
Alignment:
Q  142 ggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    |||||||||||| |||||||| |||||||||||||||||    
T  31672969 ggacactgacacaccgacacagctaataatttgaaaaaa 31672931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 1262864 - 1262913
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||| |||| |||||||||||||| |||||||||||| |||| |||||    
T  1262864 gacacgaacacggacacgccgacacagctaataatttgagaaaatcacat 1262913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 139 - 180
Target Start/End: Complemental strand, 9033085 - 9033044
Alignment:
Q  139 cacggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    |||||||||||||||| | |||| ||||||||||||||||||    
T  9033085 cacggacactgacacgtcaacaccactaataatttgaaaaaa 9033044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 16812523 - 16812572
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    ||||||||||||||||| ||||||| | ||||||||||| |||| |||||    
T  16812523 gacacggacactgacacaccgacaccaataataatttgacaaaatcacat 16812572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 34298416 - 34298465
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||| |||||||| ||||||| ||||||||||||| |||| |||||    
T  34298416 gacacggaaactgacacaccgacaccactaataatttgagaaaatcacat 34298465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 47989478 - 47989526
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    ||||| ||||||||||||||||||||| ||||||||| |||||| |||||    
T  47989478 gacacagacactgacacgccgacacaa-taataatttaaaaaaatcacat 47989526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 609530 - 609494
Alignment:
Q  144 acactgacacgccgacacaactaataatttgaaaaaa 180  Q
    |||||||||||||||||| ||||||||||||| ||||    
T  609530 acactgacacgccgacaccactaataatttgagaaaa 609494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 1815315 - 1815275
Alignment:
Q  42 gacaccgccacttgtaattacattgaattatgtgagttttt 82  Q
    ||||||| |||||||||||||| |||||||||||| |||||    
T  1815315 gacaccgacacttgtaattacactgaattatgtgatttttt 1815275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 3490463 - 3490419
Alignment:
Q  143 gacactgacacgccgacacaactaataatttgaaaaaaccacatt 187  Q
    |||||||||||||||||||  |||||||||||| ||||| |||||    
T  3490463 gacactgacacgccgacactgctaataatttgagaaaactacatt 3490419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 17831604 - 17831560
Alignment:
Q  143 gacactgacacgccgacacaactaataatttgaaaaaaccacatt 187  Q
    |||||||||||||||||||  |||||||||||| |||| ||||||    
T  17831604 gacactgacacgccgacaccgctaataatttgagaaaatcacatt 17831560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 28663666 - 28663626
Alignment:
Q  42 gacaccgccacttgtaattacattgaattatgtgagttttt 82  Q
    ||||||| ||||||||||||||| ||||||||||| |||||    
T  28663666 gacaccgacacttgtaattacatagaattatgtgatttttt 28663626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 47989555 - 47989515
Alignment:
Q  42 gacaccgccacttgtaattacattgaattatgtgagttttt 82  Q
    ||||||| |||||||||||||| |||||||||||| |||||    
T  47989555 gacaccgacacttgtaattacactgaattatgtgatttttt 47989515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 51410083 - 51410043
Alignment:
Q  42 gacaccgccacttgtaattacattgaattatgtgagttttt 82  Q
    ||||||| |||||||||||||| |||||||||||| |||||    
T  51410083 gacaccgacacttgtaattacactgaattatgtgatttttt 51410043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 180
Target Start/End: Original strand, 8778 - 8821
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  8778 gacacggacactgacacgccgacacagctaataatttgaaaaaa 8821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 180
Target Start/End: Original strand, 24105658 - 24105701
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  24105658 gacacggacactgacacgccgacacagctaataatttgaaaaaa 24105701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 11061155 - 11061106
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    ||||||||||||||||| |||||||| ||||||||||||||||| |||||    
T  11061155 gacacggacactgacacaccgacacagctaataatttgaaaaaatcacat 11061106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 84
Target Start/End: Complemental strand, 7438765 - 7438722
Alignment:
Q  41 tgacaccgccacttgtaattacattgaattatgtgagtttttca 84  Q
    |||||||| ||||||||||||||||||||||||||| |||||||    
T  7438765 tgacaccgacacttgtaattacattgaattatgtgattttttca 7438722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 135 - 186
Target Start/End: Complemental strand, 18215267 - 18215216
Alignment:
Q  135 cagacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||||||||| |||||||||| || ||||||||||||||||| |||||    
T  18215267 cagacacggacactaacacgccgacgcagctaataatttgaaaaaatcacat 18215216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 180
Target Start/End: Original strand, 27945021 - 27945064
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||    
T  27945021 gacacggacactgacacgccgacaccactaataatttgagaaaa 27945064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 35861942 - 35861993
Alignment:
Q  135 cagacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||  ||||| ||||||||||||||||||||||||||||||| |||||    
T  35861942 cagacactaacactaacacgccgacacaactaataatttgaaaaaatcacat 35861993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 24339622 - 24339671
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||| ||||| ||||||||||||||| ||||||||||||||||| |||||    
T  24339622 gacatggacattgacacgccgacacagctaataatttgaaaaaatcacat 24339671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 43027548 - 43027499
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||||||||||||| |||| || ||||||||||||||||| |||||    
T  43027548 gacacggacactgacacggcgacccagctaataatttgaaaaaatcacat 43027499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 25481887 - 25481931
Alignment:
Q  142 ggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    ||||| ||||||||||||||| ||||||||||||||||| |||||    
T  25481887 ggacaatgacacgccgacacagctaataatttgaaaaaatcacat 25481931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 396
Target Start/End: Complemental strand, 3990795 - 3990744
Alignment:
Q  345 tttgagcaatggcgttatttcgtaaaacggggaagctactcaagaattctgc 396  Q
    |||||||||||||||| ||| |||||| ||| ||| ||||||||||||||||    
T  3990795 tttgagcaatggcgttctttggtaaaatgggaaagttactcaagaattctgc 3990744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 186
Target Start/End: Complemental strand, 9408407 - 9408364
Alignment:
Q  143 gacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    ||||||||||| ||||||||| |||||||||||||||| |||||    
T  9408407 gacactgacacaccgacacaattaataatttgaaaaaatcacat 9408364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 13557823 - 13557780
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    ||||| |||||||||||||||||| |||||||||||| ||||||    
T  13557823 gacacagacactgacacgccgacaaaactaataatttaaaaaaa 13557780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 180
Target Start/End: Original strand, 13770671 - 13770714
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    |||||||||||||| ||||||||||| |||||||||| ||||||    
T  13770671 gacacggacactgatacgccgacacagctaataatttaaaaaaa 13770714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 180
Target Start/End: Original strand, 25822647 - 25822678
Alignment:
Q  149 gacacgccgacacaactaataatttgaaaaaa 180  Q
    ||||||||||||||||||||||||||||||||    
T  25822647 gacacgccgacacaactaataatttgaaaaaa 25822678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 84
Target Start/End: Complemental strand, 48438605 - 48438562
Alignment:
Q  41 tgacaccgccacttgtaattacattgaattatgtgagtttttca 84  Q
    |||||||| ||| ||||||||||||||||||||||| |||||||    
T  48438605 tgacaccgacacgtgtaattacattgaattatgtgattttttca 48438562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 175
Target Start/End: Original strand, 10042917 - 10042955
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttga 175  Q
    |||||||||||| |||||||||||| |||||||||||||    
T  10042917 gacacggacacttacacgccgacaccactaataatttga 10042955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 186
Target Start/End: Complemental strand, 11665508 - 11665470
Alignment:
Q  148 tgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  11665508 tgacacgctgacacaactaataatttgaaaaaatcacat 11665470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 24339700 - 24339658
Alignment:
Q  42 gacaccgccacttgtaattacattgaattatgtgagtttttca 84  Q
    ||||||| |||||||||||||| |||||||||||| |||||||    
T  24339700 gacaccgacacttgtaattacactgaattatgtgattttttca 24339658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 173
Target Start/End: Original strand, 37742501 - 37742539
Alignment:
Q  135 cagacacggacactgacacgccgacacaactaataattt 173  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  37742501 cagacacggacactgccacgccgacaccactaataattt 37742539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 402
Target Start/End: Complemental strand, 3985989 - 3985932
Alignment:
Q  345 tttgagcaatggcgttatttcgtaaaacggggaagctactcaagaattctgctgtcaa 402  Q
    |||||||||||||||| ||  |||||| ||| ||| ||||| ||||||||||||||||    
T  3985989 tttgagcaatggcgttcttcggtaaaatgggaaagttactccagaattctgctgtcaa 3985932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 5409915 - 5409866
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||| |||||||||||||| || ||| ||||||||||||||||| |||||    
T  5409915 gacatggacactgacacgctgatacagctaataatttgaaaaaatcacat 5409866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 180
Target Start/End: Original strand, 8234132 - 8234169
Alignment:
Q  143 gacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  8234132 gacacagacacaccgacacaactaataatttgaaaaaa 8234169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 186
Target Start/End: Complemental strand, 11272659 - 11272618
Alignment:
Q  145 cactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||| |||||||||||||| |||||||||||||| |||||    
T  11272659 cactgagacgccgacacaactgataatttgaaaaaatcacat 11272618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 11722177 - 11722128
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||||||||||||||||||||  |||| ||||||| |||| |||||    
T  11722177 gacacggacactgacacgccgacaccgctaacaatttgagaaaatcacat 11722128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 26733284 - 26733333
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||||||||||||| ||||||  |||||||||||| |||| |||||    
T  26733284 gacacggacactgacacgtcgacaccgctaataatttgacaaaatcacat 26733333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 33994192 - 33994233
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaa 178  Q
    |||||| |||||||||||||||| |||||| |||||||||||    
T  33994192 gacacgaacactgacacgccgacgcaactactaatttgaaaa 33994233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 143 - 175
Target Start/End: Complemental strand, 6630985 - 6630953
Alignment:
Q  143 gacactgacacgccgacacaactaataatttga 175  Q
    ||||||||||||||||||| |||||||||||||    
T  6630985 gacactgacacgccgacaccactaataatttga 6630953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 18039057 - 18039017
Alignment:
Q  42 gacaccgccacttgtaattacattgaattatgtgagttttt 82  Q
    ||||||| |||||||||||||| |||||||||||| |||||    
T  18039057 gacaccgacacttgtaattacactgaattatgtgatttttt 18039017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 21560561 - 21560521
Alignment:
Q  42 gacaccgccacttgtaattacattgaattatgtgagttttt 82  Q
    ||||||| |||||||||||||| |||||||||||| |||||    
T  21560561 gacaccgacacttgtaattacactgaattatgtgatttttt 21560521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 22868023 - 22868071
Alignment:
Q  138 acacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||| ||||||||||||||||||| ||||||||| ||| |||| |||||    
T  22868023 acaccgacactgacacgccgacaccactaataatatgagaaaatcacat 22868071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 32308105 - 32308149
Alignment:
Q  142 ggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    ||||||||||||||||||||  |||||||||||| |||| |||||    
T  32308105 ggacactgacacgccgacaccgctaataatttgagaaaatcacat 32308149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 40287428 - 40287392
Alignment:
Q  144 acactgacacgccgacacaactaataatttgaaaaaa 180  Q
    |||| |||||||||||||||| |||||||||||||||    
T  40287428 acacggacacgccgacacaacgaataatttgaaaaaa 40287392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 43249972 - 43250016
Alignment:
Q  136 agacacggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    ||||||||||||||||||||||||||   ||||||||||| ||||    
T  43249972 agacacggacactgacacgccgacacggataataatttgagaaaa 43250016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 180
Target Start/End: Original strand, 30298926 - 30298969
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  30298926 gacacggacactgacacgccgacacagctaataatttgaaaaaa 30298969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 180
Target Start/End: Original strand, 30327794 - 30327837
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  30327794 gacacggacactgacacgccgacacagctaataatttgaaaaaa 30327837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 19482648 - 19482689
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaa 178  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  19482648 gacacagacactgacacgccgacacaactaataatttgaaaa 19482689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 23293065 - 23293016
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||||| ||||||||||||||| ||||||||||||||||| |||||    
T  23293065 gacacggacaatgacacgccgacacagctaataatttgaaaaaatcacat 23293016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 138 - 186
Target Start/End: Complemental strand, 35158063 - 35158015
Alignment:
Q  138 acacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||||||||||||||||| |||||||||||||| ||||| |||||    
T  35158063 acacggacactgacacgccgacgcaactaataatttggaaaaatcacat 35158015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 179
Target Start/End: Complemental strand, 12797416 - 12797374
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaa 179  Q
    ||||||||||||||||||||| || ||||||||||||||||||    
T  12797416 gacacggacactgacacgccggcaaaactaataatttgaaaaa 12797374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 40481617 - 40481659
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaa 179  Q
    ||||| |||||||||||||||| ||||||||||||||||||||    
T  40481617 gacactgacactgacacgccgatacaactaataatttgaaaaa 40481659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 12895353 - 12895304
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||| ||| |||||||||||||||| |||||||||||||||| |||||    
T  12895353 gacacgaacaatgacacgccgacacaaataataatttgaaaaaatcacat 12895304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 180
Target Start/End: Original strand, 24543967 - 24544004
Alignment:
Q  143 gacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  24543967 gacactgacacgccgacacaactaataatttaaaaaaa 24544004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 179
Target Start/End: Complemental strand, 34306876 - 34306840
Alignment:
Q  143 gacactgacacgccgacacaactaataatttgaaaaa 179  Q
    |||||||| ||||||||||||||||||||||||||||    
T  34306876 gacactgatacgccgacacaactaataatttgaaaaa 34306840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 179
Target Start/End: Original strand, 4383351 - 4383390
Alignment:
Q  140 acggacactgacacgccgacacaactaataatttgaaaaa 179  Q
    ||||||||||||||| ||| ||||||||||||||||||||    
T  4383351 acggacactgacacgtcgatacaactaataatttgaaaaa 4383390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 180
Target Start/End: Original strand, 21945483 - 21945526
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    ||||| |||||||||| ||||||||| |||||||||||||||||    
T  21945483 gacacagacactgacatgccgacacagctaataatttgaaaaaa 21945526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 180
Target Start/End: Original strand, 49431009 - 49431048
Alignment:
Q  141 cggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    |||||| ||||||||||||||| |||||||||||||||||    
T  49431009 cggacagtgacacgccgacacagctaataatttgaaaaaa 49431048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 11651210 - 11651164
Alignment:
Q  140 acggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    ||||||||||||||| ||||||| |||||||||| |||||| |||||    
T  11651210 acggacactgacacgtcgacacagctaataatttaaaaaaatcacat 11651164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 12895117 - 12895159
Alignment:
Q  42 gacaccgccacttgtaattacattgaattatgtgagtttttca 84  Q
    ||||||| ||||||||||||| ||||||||||||| |||||||    
T  12895117 gacaccgacacttgtaattactttgaattatgtgattttttca 12895159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 28720856 - 28720898
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaa 179  Q
    |||||| ||||||||| ||||||||| ||||||||||||||||    
T  28720856 gacacgaacactgacatgccgacacagctaataatttgaaaaa 28720898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 12895194 - 12895146
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    ||||||||||| |||||||||| ||| ||||||||||||||||| |||||    
T  12895194 gacacggacac-gacacgccgaaacagctaataatttgaaaaaatcacat 12895146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 181
Target Start/End: Original strand, 20633468 - 20633509
Alignment:
Q  140 acggacactgacacgccgacacaactaataatttgaaaaaac 181  Q
    ||||||||||||||| ||||||  ||||||||||||||||||    
T  20633468 acggacactgacacgtcgacaccgctaataatttgaaaaaac 20633509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 27706256 - 27706207
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||| ||||||||||||| |||||||| ||||||||| |||||| |||||    
T  27706256 gacagggacactgacacgtcgacacaattaataatttaaaaaaatcacat 27706207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 29205501 - 29205460
Alignment:
Q  43 acaccgccacttgtaattacattgaattatgtgagtttttca 84  Q
    |||||| |||||||||||||| |||||||||||| |||||||    
T  29205501 acaccgacacttgtaattacactgaattatgtgattttttca 29205460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 186
Target Start/End: Original strand, 36635308 - 36635353
Alignment:
Q  141 cggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||||||||||| |||| ||||||||||||| |||| |||||    
T  36635308 cggacactgacacgccaacaccactaataatttgagaaaatcacat 36635353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 50 - 82
Target Start/End: Complemental strand, 28084572 - 28084540
Alignment:
Q  50 cacttgtaattacattgaattatgtgagttttt 82  Q
    ||||||||||||||||||||||||||| |||||    
T  28084572 cacttgtaattacattgaattatgtgatttttt 28084540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 148 - 180
Target Start/End: Complemental strand, 32273594 - 32273562
Alignment:
Q  148 tgacacgccgacacaactaataatttgaaaaaa 180  Q
    ||||||||| |||||||||||||||||||||||    
T  32273594 tgacacgccaacacaactaataatttgaaaaaa 32273562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 42640587 - 42640547
Alignment:
Q  42 gacaccgccacttgtaattacattgaattatgtgagttttt 82  Q
    ||||||| |||||||||||||| |||||||||||| |||||    
T  42640587 gacaccgacacttgtaattacactgaattatgtgatttttt 42640547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 143 - 179
Target Start/End: Original strand, 50280867 - 50280903
Alignment:
Q  143 gacactgacacgccgacacaactaataatttgaaaaa 179  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  50280867 gacacggacacgccgacacagctaataatttgaaaaa 50280903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 180
Target Start/End: Original strand, 15972853 - 15972896
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  15972853 gacacggacactgacacgccgacacaattaataatttgaaaaaa 15972896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 19536477 - 19536434
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  19536477 gacacggacaatgacacgccgacacaactaataatttgaaaaaa 19536434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 37558957 - 37559006
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||||||||||||||||||||| ||||||||||| ||||| |||||    
T  37558957 gacacggacactgacacgccgacacagctaataatttgtaaaaatcacat 37559006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 24894370 - 24894418
Alignment:
Q  138 acacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    ||||||||||||||||||||||||| |||||||||| |||||| |||||    
T  24894370 acacggacactgacacgccgacacagctaataatttaaaaaaatcacat 24894418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 12941014 - 12940971
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  12941014 gacacggacactgacacgttgacacaactaataatttgaaaaaa 12940971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 14996303 - 14996260
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    |||||||||||||||| ||||||||| |||||||||||||||||    
T  14996303 gacacggacactgacaagccgacacagctaataatttgaaaaaa 14996260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 18841092 - 18841049
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    |||| |||||||||||||| ||||||||||||||||||||||||    
T  18841092 gacatggacactgacacgctgacacaactaataatttgaaaaaa 18841049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 20539753 - 20539710
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    |||||||||||||||||| ||||||| |||||||||||||||||    
T  20539753 gacacggacactgacacgtcgacacagctaataatttgaaaaaa 20539710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 21374778 - 21374735
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    |||||||||||| ||||||||||||| |||||||||||||||||    
T  21374778 gacacggacactaacacgccgacacagctaataatttgaaaaaa 21374735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 180
Target Start/End: Original strand, 30335397 - 30335440
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    ||||||||||||  ||||||||||||||||||||||||||||||    
T  30335397 gacacggacactagcacgccgacacaactaataatttgaaaaaa 30335440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 143 - 186
Target Start/End: Complemental strand, 38117232 - 38117189
Alignment:
Q  143 gacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||||||||||||||| ||||||||||||||||| |||||    
T  38117232 gacactgacacgccgacacagctaataatttgaaaaaatcacat 38117189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 6940235 - 6940277
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaa 179  Q
    |||||||||||||||||||||||||| |||||||||| |||||    
T  6940235 gacacggacactgacacgccgacacagctaataattttaaaaa 6940277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 180
Target Start/End: Original strand, 27460011 - 27460049
Alignment:
Q  142 ggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  27460011 ggacactgacacgccgacacagctaataatttgaaaaaa 27460049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 15657844 - 15657893
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||||||| |||||||||| |||||||||||||| ||||| |||||    
T  15657844 gacacggacactaacacgccgactcaactaataatttgtaaaaatcacat 15657893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 18421943 - 18421984
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaa 178  Q
    ||||||||||||||||||||||||||| ||||||||| ||||    
T  18421943 gacacggacactgacacgccgacacaattaataatttaaaaa 18421984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 30404929 - 30404880
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||||||||||||||||||||   |||||||||||||||| |||||    
T  30404929 gacacggacactgacacgccgacacggttaataatttgaaaaaatcacat 30404880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 5040792 - 5040752
Alignment:
Q  42 gacaccgccacttgtaattacattgaattatgtgagttttt 82  Q
    ||||||| ||||||||||||||||||||||||||| |||||    
T  5040792 gacaccgacacttgtaattacattgaattatgtgatttttt 5040752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 26769497 - 26769541
Alignment:
Q  143 gacactgacacgccgacacaactaataatttgaaaaaaccacatt 187  Q
    ||||| |||||||||||||||||||||||||||||| | ||||||    
T  26769497 gacacagacacgccgacacaactaataatttgaaaatatcacatt 26769541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 180
Target Start/End: Original strand, 21624246 - 21624289
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    ||||| |||||||||||||||||||| |||||||||| ||||||    
T  21624246 gacacagacactgacacgccgacacagctaataattttaaaaaa 21624289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 23058522 - 23058479
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    |||||||||| ||||||||| |||||| ||||||||||||||||    
T  23058522 gacacggacagtgacacgcccacacaattaataatttgaaaaaa 23058479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 176
Target Start/End: Complemental strand, 36756423 - 36756384
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaa 176  Q
    ||||| |||||||||||| |||||||||||||||||||||    
T  36756423 gacacagacactgacacgtcgacacaactaataatttgaa 36756384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 81
Target Start/End: Complemental strand, 37559035 - 37558996
Alignment:
Q  42 gacaccgccacttgtaattacattgaattatgtgagtttt 81  Q
    ||||||| ||||||||||||||||||||||||||| ||||    
T  37559035 gacaccgacacttgtaattacattgaattatgtgattttt 37558996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 146 - 180
Target Start/End: Complemental strand, 12668493 - 12668459
Alignment:
Q  146 actgacacgccgacacaactaataatttgaaaaaa 180  Q
    ||||||||||||||| |||||||||||||||||||    
T  12668493 actgacacgccgacataactaataatttgaaaaaa 12668459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 20473302 - 20473344
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaa 179  Q
    ||||| |||||||||| |||||||||||||||||||| |||||    
T  20473302 gacacagacactgacatgccgacacaactaataatttaaaaaa 20473344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 21616742 - 21616791
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    ||||||||||| |||||||||||||  |||||||||||| |||| |||||    
T  21616742 gacacggacacggacacgccgacaccgctaataatttgagaaaatcacat 21616791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 30717609 - 30717560
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    ||||||||||||||||  |||||| | ||||||||||||||||| |||||    
T  30717609 gacacggacactgacaaaccgacaaagctaataatttgaaaaaatcacat 30717560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 34337255 - 34337206
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||||| |||||||||||||||  | |||||||||||||| |||||    
T  34337255 gacacggacattgacacgccgacacagttgataatttgaaaaaatcacat 34337206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 180
Target Start/End: Original strand, 37986765 - 37986802
Alignment:
Q  143 gacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  37986765 gacactgacacgccgacacagataataatttgaaaaaa 37986802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 2438720 - 2438760
Alignment:
Q  42 gacaccgccacttgtaattacattgaattatgtgagttttt 82  Q
    ||||||| |||||||||||||| |||||||||||| |||||    
T  2438720 gacaccgacacttgtaattacactgaattatgtgatttttt 2438760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 19536398 - 19536438
Alignment:
Q  42 gacaccgccacttgtaattacattgaattatgtgagttttt 82  Q
    ||||||| |||||||||||||| |||||||||||| |||||    
T  19536398 gacaccgacacttgtaattacactgaattatgtgatttttt 19536438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 20152 - 20201
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||||| ||||||||||||||| ||||||||||||||||| |||||    
T  20152 gacacggacaatgacacgccgacacagctaataatttgaaaaaatcacat 20201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 241574 - 241623
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||||||||||||||||||||| ||||||||||| ||||| |||||    
T  241574 gacacggacactgacacgccgacacagctaataatttggaaaaatcacat 241623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 19556 - 19598
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaa 179  Q
    ||||| |||||||||||||||| ||||||||||||||||||||    
T  19556 gacactgacactgacacgccgatacaactaataatttgaaaaa 19598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 149 - 186
Target Start/End: Original strand, 14522 - 14559
Alignment:
Q  149 gacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||||||||||||||||||||||||||| |||||    
T  14522 gacacgccgacacaactaataatttgaaaaaatcacat 14559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 46662 - 46711
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||||| |||||||||||||||  |||||||||||||||| |||||    
T  46662 gacacggacaatgacacgccgacacagttaataatttgaaaaaatcacat 46711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 180
Target Start/End: Original strand, 71709 - 71746
Alignment:
Q  143 gacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    |||||||||||||||||||| |||||||||||||||||    
T  71709 gacactgacacgccgacacagctaataatttgaaaaaa 71746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 180
Target Start/End: Original strand, 8002 - 8033
Alignment:
Q  149 gacacgccgacacaactaataatttgaaaaaa 180  Q
    ||||||||||||||||||||||||||||||||    
T  8002 gacacgccgacacaactaataatttgaaaaaa 8033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 225347 - 225304
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    ||||||||||||||||||||||||||  ||||||||||| ||||    
T  225347 gacacggacactgacacgccgacacagataataatttgagaaaa 225304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 185
Target Start/End: Complemental strand, 539 - 493
Alignment:
Q  139 cacggacactgacacgccgacacaactaataatttgaaaaaaccaca 185  Q
    |||||||||||| ||||||||||  ||||||||||||||||| ||||    
T  539 cacggacactgatacgccgacactgctaataatttgaaaaaatcaca 493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 178
Target Start/End: Complemental strand, 8707 - 8673
Alignment:
Q  144 acactgacacgccgacacaactaataatttgaaaa 178  Q
    ||||||||| |||||||||||||||||||||||||    
T  8707 acactgacatgccgacacaactaataatttgaaaa 8673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 10550 - 10509
Alignment:
Q  137 gacacggacactgacacgccgacacaactaataatttgaaaa 178  Q
    |||||||||||| |||| |||||||| |||||||||||||||    
T  10550 gacacggacactaacacaccgacacagctaataatttgaaaa 10509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 186
Target Start/End: Complemental strand, 7378 - 7341
Alignment:
Q  149 gacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||||||||||||||||||||||| ||||| |||||    
T  7378 gacacgccgacacaactaataatttggaaaaatcacat 7341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 186
Target Start/End: Complemental strand, 17824 - 17779
Alignment:
Q  141 cggacactgacacgccgacacaactaataatttgaaaaaaccacat 186  Q
    |||||| | |||||| |||||||||||||||||||||||| |||||    
T  17824 cggacaataacacgctgacacaactaataatttgaaaaaatcacat 17779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 7108 - 7068
Alignment:
Q  140 acggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    ||||||||||| ||| ||||||| |||||||||||||||||    
T  7108 acggacactgatacgtcgacacagctaataatttgaaaaaa 7068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 23828 - 23788
Alignment:
Q  42 gacaccgccacttgtaattacattgaattatgtgagttttt 82  Q
    ||||||| |||||||||||||| |||||||||||| |||||    
T  23828 gacaccgacacttgtaattacactgaattatgtgatttttt 23788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 130538 - 130498
Alignment:
Q  44 caccgccacttgtaattacattgaattatgtgagtttttca 84  Q
    ||||| |||||||||||||| |||||||||||| |||||||    
T  130538 caccgacacttgtaattacactgaattatgtgattttttca 130498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 92790 - 92830
Alignment:
Q  140 acggacactgacacgccgacacaactaataatttgaaaaaa 180  Q
    ||||||||||||||||||||||  |||||||||||| ||||    
T  92790 acggacactgacacgccgacaccgctaataatttgagaaaa 92830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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