View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15497_high_2 (Length: 207)
Name: NF15497_high_2
Description: NF15497
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15497_high_2 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 14597387 - 14597181
Alignment:
| Q |
1 |
aagatttagattcaaacttgttgcccaagcgattcggtaattcatccatgttggctgatagcataccagtcgctgagttccaaggtcgccctcttgcaga |
100 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14597387 |
aagatttagattcaaacttgttgcccaagcgatttggtaattcatccatgttggctgatagcataccagtcgctgagttccaaggtcgccctcttgcaga |
14597288 |
T |
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| Q |
101 |
tcatcctaacgtcaggtatggacgtccaggaggtgttcttaggaaacctcgtgaaccactcgatgctcctacagtagcagaatctgtgtctgtcatttct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14597287 |
tcatcctaacgtcaggtatggacgtccaggaggtgttcttaggaaacctcgtgaaccactcgatgctcctacagtagcagaatctgtgtctgtcatttct |
14597188 |
T |
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| Q |
201 |
tgttggt |
207 |
Q |
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||||||| |
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| T |
14597187 |
tgttggt |
14597181 |
T |
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