View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15499_low_2 (Length: 444)

Name: NF15499_low_2
Description: NF15499
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15499_low_2
NF15499_low_2
[»] chr6 (48 HSPs)
chr6 (17-357)||(33041473-33041798)
chr6 (121-310)||(33235996-33236192)
chr6 (122-357)||(9719034-9719271)
chr6 (121-358)||(30487308-30487547)
chr6 (124-361)||(19278039-19278282)
chr6 (116-309)||(1390365-1390566)
chr6 (121-357)||(9721140-9721378)
chr6 (122-295)||(5585304-5585486)
chr6 (121-357)||(14515476-14515713)
chr6 (166-358)||(4097559-4097755)
chr6 (121-236)||(10818343-10818458)
chr6 (116-293)||(34176397-34176581)
chr6 (164-358)||(21606889-21607086)
chr6 (168-358)||(31849112-31849305)
chr6 (121-320)||(1300654-1300862)
chr6 (171-298)||(10348850-10348986)
chr6 (121-320)||(16737998-16738205)
chr6 (243-315)||(2893670-2893742)
chr6 (165-309)||(2892650-2892801)
chr6 (243-357)||(12811112-12811221)
chr6 (192-297)||(13583777-13583890)
chr6 (164-235)||(2900038-2900109)
chr6 (243-314)||(6034204-6034275)
chr6 (122-317)||(26318343-26318546)
chr6 (121-318)||(665843-666054)
chr6 (165-299)||(1395691-1395834)
chr6 (283-357)||(9721141-9721210)
chr6 (121-190)||(10818231-10818300)
chr6 (261-334)||(9298636-9298709)
chr6 (268-357)||(10818232-10818316)
chr6 (164-223)||(9298625-9298685)
chr6 (122-190)||(19278211-19278278)
chr6 (165-357)||(30849960-30850153)
chr6 (166-318)||(2892890-2893053)
chr6 (243-298)||(14548738-14548793)
chr6 (168-218)||(7775996-7776046)
chr6 (283-357)||(9719034-9719103)
chr6 (121-190)||(14515475-14515544)
chr6 (204-286)||(25741476-25741566)
chr6 (278-320)||(1300787-1300829)
chr6 (283-321)||(10818388-10818426)
chr6 (127-192)||(23091129-23091195)
chr6 (164-213)||(31799070-31799120)
chr6 (122-187)||(21607020-21607085)
chr6 (122-190)||(4097686-4097754)
chr6 (284-320)||(21606879-21606915)
chr6 (121-161)||(23090997-23091037)
chr6 (317-357)||(23090998-23091038)
[»] chr3 (54 HSPs)
chr3 (116-357)||(41110318-41110562)
chr3 (121-321)||(24560251-24560459)
chr3 (140-326)||(25654991-25655187)
chr3 (116-358)||(18654597-18654843)
chr3 (164-326)||(220442-220612)
chr3 (139-304)||(52473966-52474139)
chr3 (164-313)||(30200133-30200293)
chr3 (164-320)||(37102194-37102358)
chr3 (164-354)||(21773788-21773981)
chr3 (116-314)||(41039947-41040153)
chr3 (138-320)||(46556178-46556369)
chr3 (125-321)||(27541937-27542141)
chr3 (170-324)||(9312522-9312687)
chr3 (121-280)||(36568906-36569072)
chr3 (121-281)||(16275707-16275875)
chr3 (176-321)||(2387817-2387970)
chr3 (122-224)||(28581189-28581291)
chr3 (123-304)||(37807131-37807321)
chr3 (245-315)||(651771-651841)
chr3 (123-298)||(10748299-10748484)
chr3 (243-310)||(46204931-46204998)
chr3 (243-309)||(14898022-14898088)
chr3 (243-321)||(28582641-28582719)
chr3 (182-314)||(43005804-43005942)
chr3 (243-357)||(6803333-6803442)
chr3 (170-310)||(52185060-52185207)
chr3 (170-303)||(55327422-55327563)
chr3 (243-310)||(54574493-54574560)
chr3 (122-341)||(40463874-40464096)
chr3 (121-190)||(34641163-34641232)
chr3 (249-354)||(10943752-10943852)
chr3 (122-213)||(17474209-17474301)
chr3 (115-190)||(24253895-24253970)
chr3 (116-208)||(26135952-26136044)
chr3 (243-279)||(31684362-31684398)
chr3 (124-187)||(14897981-14898044)
chr3 (116-190)||(220570-220644)
chr3 (123-213)||(17474356-17474446)
chr3 (140-190)||(28582682-28582732)
chr3 (121-190)||(41110494-41110563)
chr3 (249-356)||(12790377-12790478)
chr3 (243-279)||(31894020-31894056)
chr3 (243-315)||(37236963-37237034)
chr3 (121-208)||(13082856-13082943)
chr3 (123-190)||(55428552-55428619)
chr3 (121-203)||(23028086-23028168)
chr3 (122-187)||(6803377-6803442)
chr3 (125-190)||(21773788-21773853)
chr3 (121-190)||(24560219-24560288)
chr3 (283-320)||(30200123-30200160)
chr3 (283-320)||(37102184-37102221)
chr3 (284-321)||(52474088-52474125)
chr3 (142-190)||(30200264-30200312)
chr3 (317-357)||(42772047-42772087)
[»] chr2 (52 HSPs)
chr2 (121-357)||(36347543-36347782)
chr2 (121-320)||(23748130-23748337)
chr2 (119-355)||(8426879-8427110)
chr2 (158-321)||(15224733-15224904)
chr2 (121-357)||(36046206-36046442)
chr2 (164-309)||(39732774-39732926)
chr2 (121-320)||(19566822-19567030)
chr2 (164-320)||(39821704-39821868)
chr2 (162-298)||(16565832-16565978)
chr2 (143-360)||(36566874-36567096)
chr2 (121-298)||(40022427-40022615)
chr2 (125-324)||(12541796-12541999)
chr2 (121-235)||(34209592-34209706)
chr2 (176-310)||(28262500-28262642)
chr2 (122-324)||(31795772-31795982)
chr2 (164-310)||(7681293-7681443)
chr2 (121-235)||(9631688-9631802)
chr2 (158-309)||(29525768-29525931)
chr2 (164-235)||(27926681-27926752)
chr2 (247-357)||(35736178-35736283)
chr2 (170-357)||(9426988-9427179)
chr2 (164-235)||(42316809-42316880)
chr2 (181-270)||(17379897-17379994)
chr2 (168-218)||(1583222-1583272)
chr2 (203-294)||(2241471-2241570)
chr2 (175-304)||(37739949-37740085)
chr2 (249-298)||(9591973-9592022)
chr2 (121-190)||(36347714-36347783)
chr2 (121-213)||(35736337-35736429)
chr2 (121-212)||(887261-887351)
chr2 (244-315)||(41841722-41841793)
chr2 (115-213)||(45257456-45257555)
chr2 (243-309)||(6721754-6721820)
chr2 (119-187)||(9426985-9427053)
chr2 (121-189)||(15224868-15224936)
chr2 (121-197)||(17380007-17380083)
chr2 (121-188)||(34187577-34187644)
chr2 (243-321)||(41778807-41778885)
chr2 (113-190)||(39732901-39732978)
chr2 (254-310)||(27926613-27926669)
chr2 (124-183)||(8427051-8427110)
chr2 (115-190)||(22356177-22356252)
chr2 (121-188)||(31061361-31061428)
chr2 (116-190)||(35736172-35736246)
chr2 (283-357)||(36046207-36046276)
chr2 (176-315)||(39354231-39354378)
chr2 (243-315)||(886958-887028)
chr2 (249-298)||(2381125-2381174)
chr2 (121-214)||(16713494-16713587)
chr2 (245-282)||(32503232-32503269)
chr2 (121-190)||(36046375-36046443)
chr2 (115-187)||(41841678-41841750)
[»] chr4 (53 HSPs)
chr4 (121-357)||(54935070-54935311)
chr4 (121-314)||(27735786-27735987)
chr4 (121-298)||(45741947-45742132)
chr4 (138-357)||(31348340-31348562)
chr4 (116-358)||(5730827-5731073)
chr4 (115-357)||(37711141-37711371)
chr4 (121-315)||(54320474-54320676)
chr4 (121-311)||(49735470-49735668)
chr4 (121-303)||(41174397-41174587)
chr4 (127-303)||(35248738-35248922)
chr4 (182-357)||(26166940-26167118)
chr4 (145-357)||(1968377-1968600)
chr4 (164-358)||(46007744-46007943)
chr4 (121-303)||(24565348-24565536)
chr4 (133-310)||(6891405-6891590)
chr4 (165-294)||(36151637-36151773)
chr4 (164-321)||(47433754-47433919)
chr4 (121-216)||(6938394-6938489)
chr4 (176-284)||(16400871-16400987)
chr4 (127-321)||(17938115-17938318)
chr4 (170-357)||(29798291-29798478)
chr4 (164-235)||(34110933-34111003)
chr4 (164-309)||(44784038-44784190)
chr4 (139-357)||(21694910-21695129)
chr4 (140-285)||(22659268-22659413)
chr4 (170-357)||(2247854-2248042)
chr4 (121-190)||(31348494-31348563)
chr4 (139-311)||(45132517-45132695)
chr4 (164-309)||(28332850-28333003)
chr4 (249-357)||(56135752-56135855)
chr4 (243-298)||(2917095-2917150)
chr4 (164-238)||(36278376-36278450)
chr4 (121-190)||(1968532-1968601)
chr4 (123-190)||(27735749-27735816)
chr4 (122-185)||(46007879-46007942)
chr4 (114-192)||(2247972-2248050)
chr4 (283-357)||(54935241-54935310)
chr4 (124-323)||(55510202-55510407)
chr4 (121-190)||(45132668-45132737)
chr4 (166-207)||(45911327-45911368)
chr4 (121-190)||(54576329-54576398)
chr4 (121-188)||(54935069-54935137)
chr4 (244-304)||(31719966-31720028)
chr4 (269-315)||(2247843-2247889)
chr4 (276-314)||(6938322-6938360)
chr4 (267-313)||(27735901-27735947)
chr4 (121-187)||(47433885-47433951)
chr4 (116-186)||(47846233-47846303)
chr4 (283-357)||(49735471-49735540)
chr4 (243-303)||(22921033-22921094)
chr4 (243-303)||(22970705-22970766)
chr4 (249-298)||(34995108-34995157)
chr4 (121-209)||(37761467-37761555)
[»] chr1 (52 HSPs)
chr1 (123-320)||(8529834-8530039)
chr1 (121-313)||(40094935-40095136)
chr1 (121-357)||(30010335-30010574)
chr1 (116-357)||(12234013-12234257)
chr1 (116-358)||(38509891-38510136)
chr1 (116-357)||(41498407-41498652)
chr1 (121-353)||(2858934-2859169)
chr1 (167-357)||(32951366-32951559)
chr1 (121-357)||(35349468-35349703)
chr1 (171-320)||(50744332-50744490)
chr1 (165-356)||(51597672-51597866)
chr1 (164-315)||(10391912-10392072)
chr1 (164-314)||(49946633-49946791)
chr1 (164-319)||(6563614-6563775)
chr1 (173-310)||(45585739-45585884)
chr1 (116-235)||(43551993-43552108)
chr1 (262-357)||(26324017-26324112)
chr1 (122-235)||(20576136-20576247)
chr1 (122-235)||(7444623-7444736)
chr1 (150-304)||(26940874-26941036)
chr1 (164-278)||(36285619-36285741)
chr1 (115-234)||(28770852-28770969)
chr1 (115-190)||(32951491-32951566)
chr1 (164-235)||(40964726-40964798)
chr1 (243-303)||(44211037-44211097)
chr1 (243-320)||(2470867-2470944)
chr1 (164-271)||(41676363-41676480)
chr1 (249-309)||(43553068-43553129)
chr1 (126-190)||(2859105-2859169)
chr1 (116-183)||(23536777-23536844)
chr1 (116-190)||(35349635-35349709)
chr1 (121-190)||(30010334-30010403)
chr1 (121-186)||(41498406-41498471)
chr1 (116-208)||(2470727-2470819)
chr1 (121-213)||(2506689-2506781)
chr1 (267-315)||(41676437-41676485)
chr1 (123-186)||(35512974-35513037)
chr1 (140-190)||(10391893-10391943)
chr1 (108-190)||(12233999-12234081)
chr1 (283-357)||(12234182-12234251)
chr1 (283-321)||(38509928-38509966)
chr1 (249-298)||(1085628-1085677)
chr1 (121-170)||(20607410-20607459)
chr1 (117-190)||(25268437-25268510)
chr1 (121-218)||(40709294-40709391)
chr1 (261-314)||(49946629-49946682)
chr1 (122-190)||(7444481-7444549)
chr1 (283-315)||(35349504-35349536)
chr1 (122-190)||(38510067-38510135)
chr1 (283-315)||(40094973-40095005)
chr1 (286-314)||(43552037-43552065)
chr1 (243-319)||(49832583-49832659)
[»] chr5 (59 HSPs)
chr5 (121-357)||(13634714-13634953)
chr5 (116-330)||(7544161-7544383)
chr5 (116-321)||(10650463-10650661)
chr5 (121-326)||(26414922-26415136)
chr5 (121-357)||(16938482-16938721)
chr5 (121-293)||(8502837-8503017)
chr5 (124-320)||(36363067-36363271)
chr5 (121-314)||(28279478-28279680)
chr5 (171-320)||(9856915-9857072)
chr5 (121-321)||(37606929-37607136)
chr5 (164-315)||(4373611-4373770)
chr5 (116-314)||(10476067-10476275)
chr5 (122-309)||(9798615-9798810)
chr5 (164-355)||(36392195-36392388)
chr5 (164-309)||(10072692-10072845)
chr5 (121-321)||(37779139-37779345)
chr5 (121-221)||(1657955-1658055)
chr5 (121-235)||(14245090-14245204)
chr5 (121-310)||(37551453-37551647)
chr5 (121-310)||(37654283-37654477)
chr5 (170-324)||(20146917-20147088)
chr5 (165-357)||(16501836-16502033)
chr5 (164-356)||(2550397-2550592)
chr5 (243-298)||(22022907-22022962)
chr5 (165-235)||(20513491-20513561)
chr5 (164-235)||(43535-43607)
chr5 (245-315)||(11756917-11756987)
chr5 (165-280)||(17024270-17024393)
chr5 (164-235)||(22023495-22023568)
chr5 (164-235)||(32727822-32727893)
chr5 (198-298)||(42681510-42681618)
chr5 (121-207)||(14245202-14245288)
chr5 (253-310)||(11419303-11419360)
chr5 (243-304)||(14681520-14681581)
chr5 (243-357)||(40815300-40815408)
chr5 (122-196)||(11757070-11757144)
chr5 (243-309)||(39966084-39966150)
chr5 (121-190)||(13634713-13634782)
chr5 (164-224)||(17780279-17780340)
chr5 (121-190)||(26414895-26414964)
chr5 (170-238)||(4423336-4423404)
chr5 (119-207)||(10650427-10650517)
chr5 (121-188)||(34980812-34980879)
chr5 (267-357)||(1657969-1658054)
chr5 (283-357)||(14245218-14245287)
chr5 (164-229)||(11419237-11419302)
chr5 (164-212)||(2556167-2556215)
chr5 (249-357)||(34980813-34980916)
chr5 (251-321)||(43410-43481)
chr5 (123-182)||(2550533-2550592)
chr5 (243-319)||(14684614-14684692)
chr5 (164-235)||(29002251-29002322)
chr5 (319-357)||(8551621-8551659)
chr5 (121-183)||(10476028-10476090)
chr5 (317-359)||(12600703-12600745)
chr5 (116-186)||(33744190-33744260)
chr5 (121-187)||(40815299-40815365)
chr5 (121-190)||(16938481-16938550)
chr5 (245-325)||(13298296-13298376)
[»] chr8 (50 HSPs)
chr8 (125-321)||(31543078-31543282)
chr8 (127-326)||(11575415-11575621)
chr8 (122-315)||(16652989-16653190)
chr8 (121-320)||(11785561-11785768)
chr8 (165-314)||(1281184-1281341)
chr8 (121-341)||(31738442-31738665)
chr8 (164-330)||(1026894-1027067)
chr8 (164-324)||(7502999-7503167)
chr8 (123-357)||(30479721-30479958)
chr8 (115-310)||(3726859-3727054)
chr8 (164-318)||(29358385-29358547)
chr8 (158-309)||(30664407-30664566)
chr8 (163-321)||(7979174-7979340)
chr8 (121-229)||(34634277-34634385)
chr8 (125-321)||(36308876-36309081)
chr8 (170-298)||(6315119-6315255)
chr8 (164-313)||(37923123-37923280)
chr8 (122-317)||(11033455-11033659)
chr8 (170-357)||(9718530-9718720)
chr8 (181-315)||(37032419-37032561)
chr8 (149-357)||(2248455-2248666)
chr8 (121-314)||(41103506-41103709)
chr8 (171-305)||(28083792-28083934)
chr8 (122-235)||(29690925-29691038)
chr8 (121-310)||(40990183-40990383)
chr8 (243-315)||(42650468-42650540)
chr8 (164-357)||(4247563-4247761)
chr8 (121-190)||(43732860-43732929)
chr8 (139-226)||(10028259-10028347)
chr8 (203-315)||(33922560-33922680)
chr8 (243-309)||(10028156-10028222)
chr8 (165-304)||(13405027-13405178)
chr8 (112-186)||(9718656-9718730)
chr8 (125-190)||(1281149-1281214)
chr8 (122-190)||(16024327-16024394)
chr8 (116-186)||(31543249-31543319)
chr8 (192-226)||(35694828-35694862)
chr8 (249-298)||(12022281-12022330)
chr8 (121-189)||(2248454-2248522)
chr8 (121-188)||(8815316-8815383)
chr8 (121-236)||(24243052-24243164)
chr8 (283-321)||(3726897-3726935)
chr8 (166-212)||(5562012-5562058)
chr8 (123-188)||(7394636-7394701)
chr8 (115-208)||(30365126-30365219)
chr8 (284-321)||(31543106-31543143)
chr8 (243-304)||(38198181-38198241)
chr8 (179-212)||(42919879-42919912)
chr8 (115-191)||(7503126-7503202)
chr8 (123-187)||(11575582-11575646)
[»] chr7 (56 HSPs)
chr7 (121-321)||(41496959-41497167)
chr7 (164-358)||(33655153-33655350)
chr7 (140-310)||(24970187-24970364)
chr7 (121-321)||(47390889-47391098)
chr7 (121-311)||(40196534-40196732)
chr7 (165-320)||(34235053-34235219)
chr7 (122-313)||(42306376-42306571)
chr7 (116-357)||(13770945-13771187)
chr7 (139-357)||(25887195-25887417)
chr7 (139-357)||(1051520-1051739)
chr7 (122-315)||(43230276-43230476)
chr7 (121-235)||(18231714-18231828)
chr7 (125-235)||(4833537-4833647)
chr7 (116-354)||(41008188-41008425)
chr7 (121-290)||(45940658-45940835)
chr7 (247-357)||(39856001-39856106)
chr7 (166-320)||(17852906-17853067)
chr7 (165-326)||(34228364-34228534)
chr7 (171-298)||(40572287-40572421)
chr7 (124-235)||(10315761-10315872)
chr7 (192-320)||(37417706-37417842)
chr7 (164-235)||(32872826-32872897)
chr7 (121-235)||(13425122-13425236)
chr7 (176-274)||(22163167-22163272)
chr7 (176-274)||(22221875-22221980)
chr7 (122-358)||(26365769-26366009)
chr7 (243-357)||(31571600-31571711)
chr7 (121-207)||(48881560-48881646)
chr7 (257-314)||(23029480-23029537)
chr7 (121-190)||(39856038-39856107)
chr7 (121-201)||(36267555-36267635)
chr7 (170-309)||(42087041-42087188)
chr7 (121-190)||(31571643-31571712)
chr7 (256-320)||(10315648-10315712)
chr7 (166-234)||(19835838-19835906)
chr7 (116-224)||(31553182-31553287)
chr7 (121-298)||(33519105-33519290)
chr7 (175-235)||(47229888-47229948)
chr7 (243-303)||(48152036-48152092)
chr7 (121-190)||(13771119-13771188)
chr7 (121-190)||(28074105-28074174)
chr7 (121-238)||(30592255-30592372)
chr7 (121-190)||(34228492-34228561)
chr7 (235-304)||(38378096-38378165)
chr7 (268-321)||(40196566-40196619)
chr7 (166-213)||(2087786-2087833)
chr7 (164-203)||(30891039-30891078)
chr7 (121-188)||(37925843-37925910)
chr7 (116-186)||(47390852-47390922)
chr7 (249-299)||(48013558-48013608)
chr7 (243-304)||(18795727-18795788)
chr7 (316-357)||(28074106-28074147)
chr7 (283-315)||(33655148-33655180)
chr7 (122-186)||(33655285-33655349)
chr7 (163-191)||(34235180-34235208)
chr7 (249-357)||(37925844-37925947)
[»] scaffold0067 (3 HSPs)
scaffold0067 (115-321)||(39182-39400)
scaffold0067 (121-190)||(39363-39432)
scaffold0067 (283-357)||(39189-39259)
[»] scaffold0262 (1 HSPs)
scaffold0262 (125-315)||(16302-16500)
[»] scaffold0171 (1 HSPs)
scaffold0171 (140-310)||(15995-16173)
[»] scaffold0096 (2 HSPs)
scaffold0096 (166-326)||(6613-6780)
scaffold0096 (116-187)||(6581-6652)
[»] scaffold0341 (1 HSPs)
scaffold0341 (164-319)||(18807-18968)
[»] scaffold0294 (1 HSPs)
scaffold0294 (118-298)||(15320-15507)
[»] scaffold0026 (2 HSPs)
scaffold0026 (158-358)||(1174-1377)
scaffold0026 (122-190)||(1175-1243)
[»] scaffold0198 (1 HSPs)
scaffold0198 (122-207)||(3150-3235)
[»] scaffold0007 (1 HSPs)
scaffold0007 (123-213)||(242366-242456)
[»] scaffold0240 (1 HSPs)
scaffold0240 (121-187)||(17716-17780)
[»] scaffold0012 (1 HSPs)
scaffold0012 (123-186)||(184784-184847)


Alignment Details
Target: chr6 (Bit Score: 214; Significance: 1e-117; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 17 - 357
Target Start/End: Complemental strand, 33041798 - 33041473
Alignment:
Q  17 cacagacattaatattgtgaacttacttggtgttatttagttgtggtgagagtaatgtttcattgtctcatttagtttgagttacttaaaaatggttgtt 116  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  33041798 cacagacattaatattgtgaacttacttggtgttatttagttatggtgagagtaatgtttcattgtctcatttagtttgagttacctaaaaatggttgtt 33041699  T
Q  117 ttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagtt 216  Q
    |||||||||||||||||||||||||||||||||||||           |||| |||| ||||||||||||||||||||||||||| ||||||||||||||    
T  33041698 ttatggtgtgtttggatggaaagtttaggaggggaag----------atttattttttatttttaaattacggatactatgaaatgttttttaaaaagtt 33041609  T
Q  217 aacatattaacatgataaataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcct 316  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||  ||||||||||  ||||||||||||||||||||||      |    
T  33041608 aacatattaacatgataaataacacttcaatcacacttaatttattttaaaaaaacacattatatagtctataatttaaaaatgaaaaataaa-----tt 33041514  T
Q  317 ctcccctctcttcccctcataaacctccaatccaaacacac 357  Q
    ||||||||  |||| ||| |||||| |||||||||||||||    
T  33041513 ctcccctcctttcctctcctaaacccccaatccaaacacac 33041473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 121 - 310
Target Start/End: Complemental strand, 33236192 - 33235996
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    ||||| |||||||||| |||||| ||| |||| ||| ||||  | ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  33236192 ggtgtatttggatggagagtttatgagaggaaaggaggggagagattacttttcatttttaaattacggacactatgaaat-ttttttaaaaagttaaca 33236094  T
Q  221 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 310  Q
    ||||||||||||||        ||||  | |||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  33236093 tattaacatgataaacaatcatataattcttcaatcagtcttaatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaagtaaac 33235996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 122 - 357
Target Start/End: Original strand, 9719034 - 9719271
Alignment:
Q  122 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 221  Q
    |||||||||||| ||  |||||||||||||||||| ||||   |||| ||||||||||||||||||||| |||||| ||| |||||||||||||||||||    
T  9719034 gtgtgtttggattgagggtttaggaggggaagggaggggaggatttatttttcatttttaaattacggacactatggaatgttttttaaaaagttaacat 9719133  T
Q  222 attaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccct 313  Q
    |||||  ||||||        |||| || ||||||||||| |||||| |||| |||| |||||||||||||||| |||||||||| ||||| ||||||      
T  9719134 attaatttgataaacaatcatataatacttcaatcacactaaatttaattta-aaaagcatgttatatagtccggaatttaaaaaagaaaattaaacc-- 9719230  T
Q  314 cctctcccctctcttcccctcataaacctccaatccaaacacac 357  Q
       | |||||||||||||||||||||||  ||||||||||||||    
T  9719231 ---cacccctctcttcccctcataaaccctcaatccaaacacac 9719271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 121 - 358
Target Start/End: Original strand, 30487308 - 30487547
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    ||||||||||||||||  |||||||||||||||||| ||||  ||| |||||||||| |||||||| ||| | |||||||| | ||||||||||| ||||    
T  30487308 ggtgtgtttggatggagggtttaggaggggaagggaggggagggttcacttttcattgttaaatta-ggacagtatgaaatgtcttttaaaaagtcaaca 30487406  T
Q  221 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 312  Q
    ||||||||||||||        |||| || |||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||  |||| |||||||    
T  30487407 tattaacatgataaacaataatataatacttcaatcacacttgatttattttataaaaacatgttatatagtccgtagtttaaaaaataaaactaaaccc 30487506  T
Q  313 tcctctcccctctcttcccctcataaacctccaatccaaacacact 358  Q
    ||| ||||     ||||||||| ||||||  ||||| |||||||||    
T  30487507 tccactcc-----cttcccctcctaaaccctcaatcgaaacacact 30487547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 124 - 361
Target Start/End: Original strand, 19278039 - 19278282
Alignment:
Q  124 gtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatat 223  Q
    |||||||||||||  |||||||||||||||| | | ||  |||||||||||||||||||||||| || ||||| ||||||||||||||||||| ||||||    
T  19278039 gtgtttggatggagggtttaggaggggaaggaaggagagagtttacttttcatttttaaattactgacactataaaatattttttaaaaagttgacatat 19278138  T
Q  224 ----taacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaacc 311  Q
        ||||||||||||        | | || ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  19278139 atattaacatgataaacgatcatatgatacttcaatcagactaaatttattttagaaaaacatgttatatagtccgtaatttaaaaaag-aaaataaacc 19278237  T
Q  312 ctcctctcccctctcttcccctcataaacctccaatccaaacacacttaa 361  Q
         |||||||| ||||||||| |||||   ||||||||||||||||||    
T  19278238 -----ctcccctcccttcccctcctaaactctcaatccaaacacacttaa 19278282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 116 - 309
Target Start/End: Complemental strand, 1390566 - 1390365
Alignment:
Q  116 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 215  Q
    |||| |||||||||||||| |  |||||||||||||| ||| | |    ||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  1390566 tttaaggtgtgtttggatgaagggtttaggaggggaatggaggaggggttttacttttcatttttaaattactgacactatgaaatattttttaaaaagt 1390467  T
Q  216 taacatattaacatgata-------aataacacctcaatcacacttaatttattttagaa-aaacatgttatatagtccgtaatttaaaaatgaaaaata 307  Q
    ||||||||||||||||||       ||||| |  ||||||| |||||||||||||||||| |||||||||| |||||||||||||| |||| ||||| ||    
T  1390466 taacatattaacatgataaatgatcaataatatttcaatcaaacttaatttattttagaataaacatgttacatagtccgtaattttaaaaagaaaatta 1390367  T
Q  308 aa 309  Q
    ||    
T  1390366 aa 1390365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 121 - 357
Target Start/End: Original strand, 9721140 - 9721378
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    ||||||||||||| ||| |||||||||||||||||| ||||  ||||| ||||||||||||||||||||| |||||| ||| ||||||||||||||||||    
T  9721140 ggtgtgtttggattgaaggtttaggaggggaagggaggggagggtttatttttcatttttaaattacggacactatggaatgttttttaaaaagttaaca 9721239  T
Q  221 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 312  Q
    ||||||  ||||||        |||| || ||||||||||| | |||| |||| ||||||||||||||| ||||| |||||||||| ||||| ||||||     
T  9721240 tattaatttgataaacaatcatataatacttcaatcacactaactttaattta-aaaaacatgttatatggtccggaatttaaaaaagaaaattaaacc- 9721337  T
Q  313 tcctctcccctctcttcccctcataaacctccaatccaaacacac 357  Q
        | |||||||||| || |||||||||  |||| |||||||||    
T  9721338 ----cacccctctcttaccttcataaaccctcaattcaaacacac 9721378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 122 - 295
Target Start/End: Original strand, 5585304 - 5585486
Alignment:
Q  122 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttactttt-catttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    |||||||||||||||  |||||||||||||||| |||| |  |||||||||| | ||||||||||||| | |||||||||| |||||||||||| |||||    
T  5585304 gtgtgtttggatggagggtttaggaggggaaggaatggaagagtttactttttcttttttaaattacgaacactatgaaatgttttttaaaaaggtaaca 5585403  T
Q  221 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaa 295  Q
    ||||||||| ||||        | || |  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5585404 tattaacataataaacgattatacaatatttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaa 5585486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 121 - 357
Target Start/End: Complemental strand, 14515713 - 14515476
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    ||||||||||||||||  |||||||||||||||| | ||||  |||||  |||||||||||||||| | | ||||| ||||||||||| || ||||||||    
T  14515713 ggtgtgtttggatggagggtttaggaggggaaggaaagggagggtttagatttcatttttaaattatgaacactataaaatattttttgaagagttaaca 14515614  T
Q  221 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 312  Q
    ||| ||||||||||        |||| || ||| ||||||||||||||||||||| |||||  |||| |||||||||||||||||| |||||| |||||     
T  14515613 tatgaacatgataaatgataatataatacttcattcacacttaatttattttagagaaaca--ttatctagtccgtaatttaaaaaagaaaaacaaacc- 14515517  T
Q  313 tcctctcccctctcttcccctcataaacctccaatccaaacacac 357  Q
        |||||||| ||||||||| ||||||  ||||||||||||||    
T  14515516 ----ctcccctcccttcccctcctaaaccctcaatccaaacacac 14515476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 166 - 358
Target Start/End: Original strand, 4097559 - 4097755
Alignment:
Q  166 ttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaat 257  Q
    |||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||        |||| || |||||||||||||||    
T  4097559 ttacttttaatttttaaattacggacactttgaaatgttttttaaaaagttaacatattaacatgataaacgatcatataatacttcaatcacacttaat 4097658  T
Q  258 ttattttag-aaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacaca 356  Q
    ||||||| | ||||| ||||||||| |||||||||||||||| ||||| | ||||     || ||||| ||||||||| ||||||  |||||||||||||    
T  4097659 ttattttggaaaaaaaatgttatattgtccgtaatttaaaaaagaaaagtgaacc-----cttccctcccttcccctcttaaaccctcaatccaaacaca 4097753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 121 - 236
Target Start/End: Complemental strand, 10818458 - 10818343
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    ||||||||||||| || ||||||||||||| ||||| ||||  ||||||||||||||||||||||||||| |||||||||| ||||||||||  ||||||    
T  10818458 ggtgtgtttggattgagagtttaggaggggtagggaggggagggtttacttttcatttttaaattacggacactatgaaatgttttttaaaatattaaca 10818359  T
Q  221 tattaacatgataaat 236  Q
    ||||||||||||||||    
T  10818358 tattaacatgataaat 10818343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 116 - 293
Target Start/End: Complemental strand, 34176581 - 34176397
Alignment:
Q  116 tttatggtgtgtttggatggaaagtttaggagggga-agggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaag 214  Q
    |||||||||||||||||||||  ||||| ||||| | || |||| ||  ||||| ||||||||||||||||||||| |||||||||||||||||  ||||    
T  34176581 tttatggtgtgtttggatggagggtttatgagggaagagagatgaga--gtttagttttcatttttaaattacggacactatgaaatattttttttaaag 34176484  T
Q  215 ttaacatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaattt 293  Q
    ||||||||||||||| ||||        |||| ||  ||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  34176483 ttaacatattaacataataaacgatcgtataatactgcaatcacacttgatttattttagaaaaacatgttatataatccgtaattt 34176397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 164 - 358
Target Start/End: Original strand, 21606889 - 21607086
Alignment:
Q  164 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 255  Q
    ||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||        |||| || ||| ||||||||     
T  21606889 gtttacttttcatttttaaattacggaaactatgaaatgttttataaaaagttaacatattaacatgataaacgatcgtataatacttcagtcacacttt 21606988  T
Q  256 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacac 355  Q
    ||||||||||||||||||| | |||||||  |||||||||||| ||||  |||||  || |     ||||||||||||| ||||||  ||||||||||||    
T  21606989 atttattttagaaaaacatataatatagtttgtaatttaaaaacgaaatgtaaacattcat-----ctctcttcccctcctaaaccctcaatccaaacac 21607083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 168 - 358
Target Start/End: Complemental strand, 31849305 - 31849112
Alignment:
Q  168 acttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaattt 259  Q
    ||||||||||||||||||||||| ||||| |||| | ||||||||| ||||||||||||| |||||||        ||| || |||||||||||| ||||    
T  31849305 acttttcatttttaaattacggacactataaaatgtcttttaaaaaattaacatattaacgtgataaacaataatataatacttcaatcacacttgattt 31849206  T
Q  260 attttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacact 358  Q
    |||||||||||| ||||||||||||| ||| |||||||| ||||| ||||||     |||||||| ||||||||| ||||||  |||||| ||||||||    
T  31849205 attttagaaaaatatgttatatagtctgtagtttaaaaaagaaaactaaacc-----ctcccctcccttcccctcttaaaccctcaatcctaacacact 31849112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 121 - 320
Target Start/End: Complemental strand, 1300862 - 1300654
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    ||||||||||||||||  |||| | ||  ||| ||| ||||  ||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||    
T  1300862 ggtgtgtttggatggagggtttggaagatgaatggaggggagggtttacttttcatttttaaattacggacaatatgaaatattttataaaaagttaaca 1300763  T
Q  221 tattaacatgataa--------ataacacctcaatcacacttaatttat-tttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaacc 311  Q
    ||||||| ||||||        |||| || ||||||||||||||||||| || | ||||| |||||||||| |||||||||||||||   ||| ||||||    
T  1300762 tattaacctgataaacaatcatataatacttcaatcacacttaatttatcttgaaaaaaatatgttatataatccgtaatttaaaaacataaagtaaacc 1300663  T
Q  312 ctcctctcc 320  Q
    |||| ||||    
T  1300662 ctcccctcc 1300654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 171 - 298
Target Start/End: Original strand, 10348850 - 10348986
Alignment:
Q  171 tttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaatttatt 262  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||||||| | |||||        |||| || |||||| ||||| | |||||    
T  10348850 tttcatttttaaattacggataatatgaaatatcttttaaaaagttaacatattaatacgataaacgataatataatacttcaatcgcacttgaattatt 10348949  T
Q  263 tt-agaaaaacatgttatatagtccgtaatttaaaaa 298  Q
    || | ||||||||||||||||||||||||||||||||    
T  10348950 ttaaaaaaaacatgttatatagtccgtaatttaaaaa 10348986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 121 - 320
Target Start/End: Original strand, 16737998 - 16738205
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    ||||||||||||||||  ||||| ||| ||||| || |||||  |||||||||| ||||||||||| ||| |||||||||| |||||| | || |||| |    
T  16737998 ggtgtgtttggatggagggtttaagagaggaagagaggggaagatttacttttcgtttttaaattatggaaactatgaaatgttttttgataaattaaaa 16738097  T
Q  221 tattaacatgat--------aaataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 312  Q
    || |||||||||        | |||| || | ||| ||||||| |||||||||||||||||| ||||||| || |||||||||||| ||||| ||||| |    
T  16738098 taataacatgatatacgatcatataatacttaaataacacttactttattttagaaaaacattttatataatctgtaatttaaaaaagaaaagtaaactc 16738197  T
Q  313 tcctctcc 320  Q
    ||| ||||    
T  16738198 tcccctcc 16738205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 243 - 315
Target Start/End: Complemental strand, 2893742 - 2893670
Alignment:
Q  243 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 315  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||| ||||| ||||    
T  2893742 tcaatcacacttaatttattttagaaaaacatgttatatagtctgtagtttaaaaacgaaaagtaaactctcc 2893670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 165 - 309
Target Start/End: Original strand, 2892650 - 2892801
Alignment:
Q  165 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaa 256  Q
    |||||||||  || |||||||||| | ||||||| |||||||||||||| |||| ||| ||||||||||||        ||| |  ||||||||||| ||    
T  2892650 tttactttttgttgttaaattacgcacactatgagatattttttaaaaa-ttaaaataataacatgataaacaatcatataatatttcaatcacactaaa 2892748  T
Q  257 tttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaa 309  Q
    |||||||||||||||| |||||||||||||||| |||||||| ||||| ||||    
T  2892749 tttattttagaaaaacgtgttatatagtccgtagtttaaaaaagaaaagtaaa 2892801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 243 - 357
Target Start/End: Original strand, 12811112 - 12811221
Alignment:
Q  243 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacct 342  Q
    |||||||||||||||||||||||||||||||| ||||||||||  ||||||||| | ||||| ||| ||     ||||||||||||||| || ||||||     
T  12811112 tcaatcacacttaatttattttagaaaaacatattatatagtctctaatttaaagaagaaaagtaatcc-----ctcccctctcttcccatcctaaaccc 12811206  T
Q  343 ccaatccaaacacac 357  Q
     ||||||||||||||    
T  12811207 tcaatccaaacacac 12811221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 192 - 297
Target Start/End: Complemental strand, 13583890 - 13583777
Alignment:
Q  192 actatgaaatattttttaaaaagttaacatattaacatgataaat--------aacacctcaatcacacttaatttattttagaaaaacatgttatatag 283  Q
    |||||||||| ||||||||||| ||||||| ||||||| ||||||        || |  ||||||||||||||||||||||||||||||||||||||||     
T  13583890 actatgaaatgttttttaaaaaattaacatgttaacataataaatgatcatataatatttcaatcacacttaatttattttagaaaaacatgttatataa 13583791  T
Q  284 tccgtaatttaaaa 297  Q
    || |||||||||||    
T  13583790 tctgtaatttaaaa 13583777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 2900109 - 2900038
Alignment:
Q  164 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 235  Q
    |||||||||||||||||||||||  || |||||||||| |||| ||| ||||||||||||||||||||||||    
T  2900109 gtttacttttcatttttaaattatagacactatgaaatgttttataagaagttaacatattaacatgataaa 2900038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 243 - 314
Target Start/End: Original strand, 6034204 - 6034275
Alignment:
Q  243 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctc 314  Q
    |||||||||||||||||||||||||||||||||||||| |||| | |||||||||| ||||| |||| ||||    
T  6034204 tcaatcacacttaatttattttagaaaaacatgttatacagtctgcaatttaaaaaagaaaagtaaatcctc 6034275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 122 - 317
Target Start/End: Complemental strand, 26318546 - 26318343
Alignment:
Q  122 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 221  Q
    ||||||||||||||| |||||||||||| |||||| |||||  |||||||||| ||||||||||| ||||  ||| ||||   ||||| ||| || |  |    
T  26318546 gtgtgtttggatggagagtttaggagggaaagggaggggaagatttacttttcttttttaaattatggattttataaaatgacttttagaaaattgaatt 26318447  T
Q  222 attaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccct 313  Q
    |  ||||||||||        |||| || ||||  ||||||||||||||||| |||||||| ||||||  | |||||||||||||  |||||| ||||||    
T  26318446 aacaacatgataattgatcatataatacttcaaaaacacttaatttattttaaaaaaacattttatatttttcgtaatttaaaaaataaaaatgaaccct 26318347  T
Q  314 cctc 317  Q
    ||||    
T  26318346 cctc 26318343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 121 - 318
Target Start/End: Original strand, 665843 - 666054
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagtt-aac 219  Q
    |||||||||||||| |  ||||||||||||||| || ||||  ||| | ||||||||||||||||| | ||| |||||||| | ||||||||| || |||    
T  665843 ggtgtgtttggatg-agggtttaggaggggaagtgaggggagggttcatttttcatttttaaattatgaatattatgaaatgtcttttaaaaattttaac 665941  T
Q  220 atattaacatgataaat--------aacacctcaatcacacttaatttattttaga------aaaacatgttatatagtccgtaatttaaaaatgaaaaa 305  Q
    |||||||||||||||||        || || |||| |||||||||||| |||||        |||||||||| ||||||| ||| |||||||| ||||||    
T  665942 atattaacatgataaatgatgatataatacttcaaccacacttaattttttttattttttataaaacatgttgtatagtctgtagtttaaaaaagaaaaa 666041  T
Q  306 taaaccctcctct 318  Q
    ||||| |||||||    
T  666042 taaactctcctct 666054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 165 - 299
Target Start/End: Complemental strand, 1395834 - 1395691
Alignment:
Q  165 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaataac--------acctcaatcacacttaa 256  Q
    |||||||||||||||||||||||  | ||| |  ||| ||||||||||| ||||||||||| |||||||||| |         |  ||||||||||||||    
T  1395834 tttacttttcatttttaaattactaacactgtagaatgttttttaaaaaattaacatattagcatgataaatgatcatgtattatttcaatcacacttaa 1395735  T
Q  257 tttattttagaaaaa-catgttatatagtccgtaatttaaaaat 299  Q
    ||||||||| ||||| ||||||| ||||||||||||| ||||||    
T  1395734 tttattttataaaaaacatgttacatagtccgtaattaaaaaat 1395691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 283 - 357
Target Start/End: Complemental strand, 9721210 - 9721141
Alignment:
Q  283 gtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 357  Q
    |||||||||||||||||||||||||||||     |||||||| ||||||||| ||||||| ||||||||||||||    
T  9721210 gtccgtaatttaaaaatgaaaaataaacc-----ctcccctcccttcccctcctaaaccttcaatccaaacacac 9721141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 10818231 - 10818300
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 190  Q
    ||||||||||||| ||  |||||||||||||||||| |||| |||||| ||||| |||||||||||||||    
T  10818231 ggtgtgtttggattgagggtttaggaggggaagggaggggattgtttatttttcttttttaaattacgga 10818300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 334
Target Start/End: Original strand, 9298636 - 9298709
Alignment:
Q  261 ttttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctc 334  Q
    ||||| |||||||| | |||  ||||||||||||||| |||||| |||||||||| |||||||| |||||||||    
T  9298636 ttttaaaaaaacatttcataatgtccgtaatttaaaattgaaaagtaaaccctcccctcccctcccttcccctc 9298709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 268 - 357
Target Start/End: Complemental strand, 10818316 - 10818232
Alignment:
Q  268 aaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 357  Q
    |||||||||||||| |||||||||||||||| ||||||||||     |  ||||||| ||||||||| ||||||  ||||||||||||||    
T  10818316 aaaacatgttatattgtccgtaatttaaaaaagaaaaataaa-----caatcccctcccttcccctcctaaaccctcaatccaaacacac 10818232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 223
Target Start/End: Complemental strand, 9298685 - 9298625
Alignment:
Q  164 gtttacttttcatttttaaattacggatactatgaaat-attttttaaaaagttaacatat 223  Q
    |||||||||||| |||||||||||||| | ||||||||  |||||||||||||||||||||    
T  9298685 gtttacttttcaattttaaattacggacattatgaaatgtttttttaaaaagttaacatat 9298625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 19278278 - 19278211
Alignment:
Q  122 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 190  Q
    |||||||||||| || ||||||||||||||||||| ||||  ||||| ||||| |||||||||||||||    
T  19278278 gtgtgtttggattgagagtttaggaggggaagggaggggagggttta-ttttcttttttaaattacgga 19278211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 165 - 357
Target Start/End: Original strand, 30849960 - 30850153
Alignment:
Q  165 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaa 256  Q
    ||||| |||| ||||||||||||| ||||||| |||||||||||||||  |||| ||| |||||||||||        |||| || ||||| | ||| ||    
T  30849960 tttacatttcgtttttaaattacgcatactataaaatattttttaaaa--ttaaaataataacatgataaacgatcatataatacttcaattatactaaa 30850057  T
Q  257 tttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacaca 356  Q
    ||| ||||| |||||||| ||||||| | | ||||||||||   |||| ||||     ||||||| |||||| ||||| ||||||  |||||||||||||    
T  30850058 tttgttttaaaaaaacatattatataattcataatttaaaataaaaaagtaaa-----ctctcccttctctttccctcctaaaccctcaatccaaacaca 30850152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 166 - 318
Target Start/End: Original strand, 2892890 - 2893053
Alignment:
Q  166 ttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacactt--a 255  Q
    ||||||||  ||||||||||||| | ||||||||||||||| ||| ||  ||| ||| ||||||||||||        ||| || |||||||||||   |    
T  2892890 ttactttttgtttttaaattacgcacactatgaaatattttgtaagaaagtaaaataataacatgataaacgatcatataatacttcaatcacactataa 2892989  T
Q  256 atttattttagaaaa-acatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctct 318  Q
    |||||||| | |||| | || ||||||||| ||||||||||||| ||||| |||||||||||||    
T  2892990 atttatttaaaaaaatatattttatatagttcgtaatttaaaaaagaaaagtaaaccctcctct 2893053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 298
Target Start/End: Original strand, 14548738 - 14548793
Alignment:
Q  243 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaa 298  Q
    ||||||||| ||||||||||||| || ||||| |||||| ||||||||||||||||    
T  14548738 tcaatcacagttaatttattttaaaataacattttatattgtccgtaatttaaaaa 14548793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 7775996 - 7776046
Alignment:
Q  168 acttttcatttttaaattacggatactatgaaatattttttaaaaagttaa 218  Q
    |||||||||||| |||||||| | ||||| |||||||||||||||||||||    
T  7775996 acttttcattttaaaattacgaacactataaaatattttttaaaaagttaa 7776046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 283 - 357
Target Start/End: Complemental strand, 9719103 - 9719034
Alignment:
Q  283 gtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 357  Q
    ||||||||||||||||||||||||||| |     |||||||| ||||||||| ||||||  ||||||||||||||    
T  9719103 gtccgtaatttaaaaatgaaaaataaatc-----ctcccctcccttcccctcctaaaccctcaatccaaacacac 9719034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 14515475 - 14515544
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 190  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||||  ||||| |||||||||||||||    
T  14515475 ggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcttttttaaattacgga 14515544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 204 - 286
Target Start/End: Complemental strand, 25741566 - 25741476
Alignment:
Q  204 tttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtcc 286  Q
    ||||||||||||||||||| ||| ||||||||        ||| || ||| |||| |||||||||||||| ||||||||||||||||||||    
T  25741566 tttttaaaaagttaacataataatatgataaacgatcatataaaacttcagtcacgcttaatttattttaaaaaaacatgttatatagtcc 25741476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 1300787 - 1300829
Alignment:
Q  278 atatagtccgtaatttaaaaatgaaaaataaaccctcctctcc 320  Q
    |||| |||||||||||||||||||||| |||||||||| ||||    
T  1300787 atattgtccgtaatttaaaaatgaaaagtaaaccctcccctcc 1300829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 283 - 321
Target Start/End: Original strand, 10818388 - 10818426
Alignment:
Q  283 gtccgtaatttaaaaatgaaaaataaaccctcctctccc 321  Q
    |||||||||||||||||||||| |||||||||| |||||    
T  10818388 gtccgtaatttaaaaatgaaaagtaaaccctcccctccc 10818426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 192
Target Start/End: Complemental strand, 23091195 - 23091129
Alignment:
Q  127 tttggatggaaagtttaggaggggaagggatgggaatgtttacttttc-atttttaaattacggata 192  Q
    ||||||||||  |||||||||||||||||| ||||  | |||||||||  |||||||||||||||||    
T  23091195 tttggatggagggtttaggaggggaagggaggggagggcttacttttctttttttaaattacggata 23091129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 213
Target Start/End: Complemental strand, 31799120 - 31799070
Alignment:
Q  164 gtttacttttcatttttaaattacggatactatgaaat-attttttaaaaa 213  Q
    ||||||||||| ||||||||||||||||| ||| |||| ||||||||||||    
T  31799120 gtttacttttcttttttaaattacggatattataaaataattttttaaaaa 31799070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 187
Target Start/End: Complemental strand, 21607085 - 21607020
Alignment:
Q  122 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 187  Q
    |||||||||||| ||  ||||||||||||||| ||   |||||||||| |||| ||||||||||||    
T  21607085 gtgtgtttggattgagggtttaggaggggaagagagatgaatgtttacatttcgtttttaaattac 21607020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 4097754 - 4097686
Alignment:
Q  122 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 190  Q
    |||||||||||| ||  ||||| |||||||||||| || |  ||| ||||||| |||||||||||||||    
T  4097754 gtgtgtttggattgagggtttaagaggggaagggagggaagggttcacttttcttttttaaattacgga 4097686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 320
Target Start/End: Complemental strand, 21606915 - 21606879
Alignment:
Q  284 tccgtaatttaaaaatgaaaaataaaccctcctctcc 320  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  21606915 tccgtaatttaaaaatgaaaagtaaaccctcccctcc 21606879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 121 - 161
Target Start/End: Original strand, 23090997 - 23091037
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatggga 161  Q
    ||||||||||||| ||| |||||||||||||||||| ||||    
T  23090997 ggtgtgtttggattgaaggtttaggaggggaagggagggga 23091037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 23091038 - 23090998
Alignment:
Q  317 ctcccctctcttcccctcataaacctccaatccaaacacac 357  Q
    |||||||| ||||||||| ||||||| ||||||||||||||    
T  23091038 ctcccctcccttcccctcctaaaccttcaatccaaacacac 23090998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 129; Significance: 1e-66; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 116 - 357
Target Start/End: Original strand, 41110318 - 41110562
Alignment:
Q  116 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 215  Q
    |||||||||||||||||||||   ||||||||||||||||| | ||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  41110318 tttatggtgtgtttggatggaggatttaggaggggaagggaggagaaggtttacttttcatttttaaattacggacactatgaaatattttataaaaagt 41110417  T
Q  216 taacatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaata 307  Q
    |||||||||||||||||||        |||| || |||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||| ||    
T  41110418 taacatattaacatgataaacaatcatataatacttcaatcacacttaatttattttcgaaaaacatgttatctagtccgtaatttaaaaacgaaaagta 41110517  T
Q  308 aaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 357  Q
    |||| ||||||||     |||||||||| |||||  ||||||||||||||    
T  41110518 aaccttcctctcc-----cttcccctcacaaaccctcaatccaaacacac 41110562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 121 - 321
Target Start/End: Complemental strand, 24560459 - 24560251
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    ||||||||||||||||  |||||||||||||| ||||||||  |||||||||||||||||||||||| || |||||||||| ||||||||||||||||||    
T  24560459 ggtgtgtttggatggagggtttaggaggggaacggatgggagagtttacttttcatttttaaattaccgacactatgaaatgttttttaaaaagttaaca 24560360  T
Q  221 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 312  Q
    ||||||||||||||        |||| || ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||    
T  24560359 tattaacatgataaacgatcatataatacttcaatcacatttaatttattttagaaaaacatgttacatagtccgtaatttaaaaaagaaaaacaaaccc 24560260  T
Q  313 tcctctccc 321  Q
    ||| |||||    
T  24560259 tcccctccc 24560251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 140 - 326
Target Start/End: Original strand, 25654991 - 25655187
Alignment:
Q  140 tttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaat--- 236  Q
    ||||||||||||||||| ||||  |||||||||||||||||| |||||| | |||| ||||| |||||| || |||||||||||||| |||||||||       
T  25654991 tttaggaggggaagggaggggagggtttacttttcatttttatattacgaacactaagaaatgttttttgaagagttaacatattaatatgataaatgat 25655090  T
Q  237 -------aacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctc 326  Q
           || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||| ||||    
T  25655091 catatataatacttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaagttaaaccctcccctcccttctc 25655187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 116 - 358
Target Start/End: Original strand, 18654597 - 18654843
Alignment:
Q  116 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 215  Q
    |||| ||||||||||||||||  ||||||||||| ||| |||||||  |||||  ||||||||||||||||||||  |||| ||||||||||| || |||    
T  18654597 tttagggtgtgtttggatggagggtttaggagggaaagagatgggagggtttagatttcatttttaaattacggaccctataaaatattttttgaagagt 18654696  T
Q  216 taacatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaata 307  Q
    |||||||||||||||||||        |||| || ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    |||| ||    
T  18654697 taacatattaacatgataaatgatcatataatacttcaattacacttaatttattttagagaaacatgttatatagtccgtaatttaaa----aaaagta 18654792  T
Q  308 aaccctcctctcccctctcttcccctcataaacctccaatccaaacacact 358  Q
    || |   |||||||||| ||||||||| ||||||  |||| ||||||||||    
T  18654793 aaacaaactctcccctcccttcccctcctaaaccctcaattcaaacacact 18654843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 164 - 326
Target Start/End: Original strand, 220442 - 220612
Alignment:
Q  164 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 255  Q
    ||||| ||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||| ||||        ||||||| ||||||| ||||     
T  220442 gtttagttttcatttttaaattacggacattatgaaatgttttttaaaaagttaacatattaacataataaacaatcttataacacttcaatcatacttg 220541  T
Q  256 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctc 326  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||  |||| ||||| ||||    
T  220542 atttattttagaaaaacatgttacatagtccgtaatttaaaaaagaaaagtaaattctcccctcccttctc 220612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 139 - 304
Target Start/End: Complemental strand, 52474139 - 52473966
Alignment:
Q  139 gtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa---- 234  Q
    ||||||||||||||||||  |||  |||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||        
T  52474139 gtttaggaggggaagggagaggagggtttactttttatttttaaattacggatcctatgaaatattttgtaaaaagttaacatattaatatgataaacag 52474040  T
Q  235 ----ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaa 304  Q
        |||| || |||||||||  |||||||||||| || ||||||||||||| ||||||||||||||| |||||    
T  52474039 tcatataatacttcaatcacatgtaatttattttaaaataacatgttatataatccgtaatttaaaaaagaaaa 52473966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 164 - 313
Target Start/End: Original strand, 30200133 - 30200293
Alignment:
Q  164 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaataac-----------acctcaatcacac 252  Q
    ||||| ||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||| ||||| |||           || | ||||||||    
T  30200133 gtttagttttcatttttaaattacggacactatgaaatgttttttaaaaagtttacatattaacataataaacaacgatcatatagtactttaatcacac 30200232  T
Q  253 ttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccct 313  Q
    || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  30200233 ttgatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaagtaaaccct 30200293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 164 - 320
Target Start/End: Original strand, 37102194 - 37102358
Alignment:
Q  164 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa-------ataacacctcaatcacacttaa 256  Q
    ||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||       |||| || |||| ||||||| |    
T  37102194 gtttagttttcatttttaaattacggacactatgaaatgttttttaaaaagttaacatattaacataataacgatcatataatacttcaaccacacttga 37102293  T
Q  257 tttattttag-aaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcc 320  Q
    |||||||||| |||||||||||||||||||||||||||||||| || || |||||| ||| ||||    
T  37102294 tttattttagaaaaaacatgttatatagtccgtaatttaaaaaagataagtaaaccttcccctcc 37102358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 164 - 354
Target Start/End: Complemental strand, 21773981 - 21773788
Alignment:
Q  164 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacactta 255  Q
    |||||||||| |||||||||||||| | |||| ||||| |||||||||||||||||||||| ||||||||||        |||  | |||||||||||||    
T  21773981 gtttactttttatttttaaattacgaacactaggaaatgttttttaaaaagttaacatatttacatgataaacaatcatataattcttcaatcacactta 21773882  T
Q  256 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaaca 354  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||| || |||     || || || ||||||||| ||||||| |||||||||||    
T  21773881 atttattttagaaaaacatgttatatagtccgtaatttagaaaagaaaagtatacc-----cttccttcccttcccctcctaaaccttcaatccaaaca 21773788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 116 - 314
Target Start/End: Original strand, 41039947 - 41040153
Alignment:
Q  116 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 215  Q
    |||| ||||||||||||||||| ||||||||||||||| ||  | |   |||| |||||| ||||||||||| || ||||||||||||||| ||||||||    
T  41039947 tttagggtgtgtttggatggaaggtttaggaggggaagagagcgtaggctttaattttcaattttaaattacagacactatgaaatattttataaaaagt 41040046  T
Q  216 taacatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaata 307  Q
    |||||||||||||||||||        |||| || |||||||| |||| ||||||||| |||| |||||||| || ||||||||||||||  ||||| ||    
T  41040047 taacatattaacatgataaacaatcatataatacttcaatcacgcttactttattttaaaaaatcatgttatctaatccgtaatttaaaagcgaaaagta 41040146  T
Q  308 aaccctc 314  Q
    |||||||    
T  41040147 aaccctc 41040153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 138 - 320
Target Start/End: Complemental strand, 46556369 - 46556178
Alignment:
Q  138 agtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatg------- 230  Q
    |||||||||| |||| ||| ||||  ||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||| |||||||||||           
T  46556369 agtttaggagaggaatggaggggag-gtttacttttcatttttcaattacggacactatgacatattttttaaaaagttaagatattaacatgacaaacg 46556271  T
Q  231 ---ataaataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcc 320  Q
       ||| |||| || ||||||||||| |||||||||| ||||||||| |||||||||| |||||||||||| ||||| ||||| |||| ||||    
T  46556270 gtcatatataatacttcaatcacactcaatttattttggaaaaacatattatatagtctgtaatttaaaaaagaaaattaaactctcccctcc 46556178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 125 - 321
Target Start/End: Original strand, 27541937 - 27542141
Alignment:
Q  125 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatt 224  Q
    ||||||||| ||  |||||||||||||||||| | ||  ||| || ||||||||||||||||  || ||||||||||| || |||||||  |||||||||    
T  27541937 tgtttggattgagggtttaggaggggaagggaggagatggttcacatttcatttttaaattagagacactatgaaatacttgttaaaaatctaacatatt 27542036  T
Q  225 aacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcct 316  Q
    ||||||||||        |||| || ||||||||| ||||||||||||||||||| |||||||||||| | ||||||||||| |||||| |||| ||||     
T  27542037 aacatgataaacgatcatataatacttcaatcacagttaatttattttagaaaaatatgttatatagttcataatttaaaaaagaaaaacaaactctccc 27542136  T
Q  317 ctccc 321  Q
    |||||    
T  27542137 ctccc 27542141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 170 - 324
Target Start/End: Original strand, 9312522 - 9312687
Alignment:
Q  170 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaatttat 261  Q
    |||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||        |||| ||   |||||||||||||||||    
T  9312522 ttttcatttttaaattacagacactatgaaatattttgtaaaaagttaacatattaacatgataaacaatcatataatactcaaatcacacttaatttat 9312621  T
Q  262 tttagaaaaac---atgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctc 324  Q
    ||||||||| |   ||||||||||||| |||||||||||| |||||  ||||||||| ||||||||    
T  9312622 tttagaaaatcatgatgttatatagtcggtaatttaaaaaagaaaatcaaaccctcccctcccctc 9312687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 121 - 280
Target Start/End: Original strand, 36568906 - 36569072
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    ||||||||||||||||  ||||||||| |||| ||| ||||  ||||| |||||||||||||||| || | |||||||||| ||||| ||||||||||||    
T  36568906 ggtgtgtttggatggagggtttaggagtggaatggaggggagagttta-ttttcatttttaaatttcgaacactatgaaatgtttttcaaaaagttaaca 36569004  T
Q  221 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttata 280  Q
    ||||||||||||||        |||| |  ||||||||||||||||||||||||||||||||| ||||    
T  36569005 tattaacatgataaacaatcgtataatagttcaatcacacttaatttattttagaaaaacatgatata 36569072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 121 - 281
Target Start/End: Original strand, 16275707 - 16275875
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    ||||||||||||||||  |||||  |||| |||||| ||||  ||| ||| |||||||||||||| |||| | |||||||| |||| ||||||||||||     
T  16275707 ggtgtgtttggatggatggtttataagggaaagggaggggagagttcactattcatttttaaatttcggacattatgaaatgttttataaaaagttaact 16275806  T
Q  221 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatat 281  Q
    ||||||||||||||        |||| || |||||||||||| ||||||||||||||||||||||||||    
T  16275807 tattaacatgataaacaaccatataatacttcaatcacacttgatttattttagaaaaacatgttatat 16275875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 176 - 321
Target Start/End: Original strand, 2387817 - 2387970
Alignment:
Q  176 tttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttattttaga 267  Q
    ||||||||||||||| |||||| ||| |||||||| ||||||| ||| ||||||||||||        ||| |  | |||||||||||||||||||||||    
T  2387817 tttttaaattacggacactatggaatgttttttaataagttaaaataataacatgataaacgatcatataataatttaatcacacttaatttattttaga 2387916  T
Q  268 aaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctccc 321  Q
    |||||||||||||||| |||| ||||| ||| ||||| |||||||||| |||||    
T  2387917 aaaacatgttatatagaccgtgatttagaaaagaaaagtaaaccctcccctccc 2387970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 122 - 224
Target Start/End: Original strand, 28581189 - 28581291
Alignment:
Q  122 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 221  Q
    |||||||||||||||  |||||| || |||||||| ||||  ||||| |||||||||||||||||| |||| | ||||||||||||||||||||||||||    
T  28581189 gtgtgtttggatggagggtttagaagaggaagggaggggagggtttagttttcatttttaaattacagatattgtgaaatattttttaaaaagttaacat 28581288  T
Q  222 att 224  Q
    |||    
T  28581289 att 28581291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 123 - 304
Target Start/End: Complemental strand, 37807321 - 37807131
Alignment:
Q  123 tgtgtttggatggaaagtttaggagggg-aagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 221  Q
    |||||||| |||||  |||||||||||| ||| || |  |||||||||||||| ||||||||||  ||| |||||||||| |||||||||||||||| ||    
T  37807321 tgtgtttgaatggagggtttaggagggggaagagaggacaatgtttacttttcgtttttaaattttggacactatgaaatgttttttaaaaagttaatat 37807222  T
Q  222 attaacatgataa--------ataacacctcaatcacacttaa-tttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaa 304  Q
    |||||||||||||        |||| || |||||||||||||| ||||||||  ||||| |||||||||||| |||| |||||||| |||||    
T  37807221 attaacatgataaacgatcatataatacttcaatcacacttaattttattttttaaaaa-atgttatatagttcgtagtttaaaaaagaaaa 37807131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 245 - 315
Target Start/End: Complemental strand, 651841 - 651771
Alignment:
Q  245 aatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 315  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||| ||||||||||    
T  651841 aatcacacttaatttattttagaaaaacatgttatatagtctataatttaaaaaagaaaagtaaaccctcc 651771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 123 - 298
Target Start/End: Original strand, 10748299 - 10748484
Alignment:
Q  123 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacata 222  Q
    ||||||||||||||  ||||||||||||||||||   ||  ||||||     |||||||||||||||  | ||| |||| ||||||||||||||||||||    
T  10748299 tgtgtttggatggagggtttaggaggggaagggagaagagagtttac-----atttttaaattacgggcattataaaatgttttttaaaaagttaacata 10748393  T
Q  223 ttaacatgataaat---------------aacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaa 298  Q
    ||||||||||||||               || || |  ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  10748394 ttaacatgataaatgataaaaggtcatataatacttttatcacacttaatttattttagaaaaacatgttatatactccgtaatttaaaaa 10748484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 243 - 310
Target Start/End: Complemental strand, 46204998 - 46204931
Alignment:
Q  243 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 310  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||| |||||    
T  46204998 tcaatcacacttaatttattttagaaaaacatgttatatagttcataatttaaaaaagaaaagtaaac 46204931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 243 - 309
Target Start/End: Complemental strand, 14898088 - 14898022
Alignment:
Q  243 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaa 309  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||| ||||    
T  14898088 tcaatcacacttaatttattttagaaaaacatgtcatatagtctgtaatttaaaaaagaaaagtaaa 14898022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 28582641 - 28582719
Alignment:
Q  243 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctccc 321  Q
    |||| ||||||| |||||| ||||||||||||||||||| |||||||||||||||| ||||| |||||||||| |||||    
T  28582641 tcaaccacacttgatttatcttagaaaaacatgttatatcgtccgtaatttaaaaaagaaaagtaaaccctcccctccc 28582719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 182 - 314
Target Start/End: Original strand, 43005804 - 43005942
Alignment:
Q  182 aattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaaca 273  Q
    ||||||||||  ||||||||||||||||||||||||||||||||| |||||||        |||| || ||||||| | | ||||||||||||||||| |    
T  43005804 aattacggat--tatgaaatattttttaaaaagttaacatattaatatgataaaatatcatataatacttcaatcaaattaaatttattttagaaaaata 43005901  T
Q  274 tgttatatagtccgtaatttaaaaatgaaaaataaaccctc 314  Q
    |||||||||||  | |||||||||| ||||| |||| ||||    
T  43005902 tgttatatagtttggaatttaaaaaagaaaattaaatcctc 43005942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 243 - 357
Target Start/End: Original strand, 6803333 - 6803442
Alignment:
Q  243 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacct 342  Q
    |||||||||| |||||||||||| |||||| | ||  |||||| |||||||||||| ||||| ||||     ||||| |||||||||||||| |||||||    
T  6803333 tcaatcacacataatttattttataaaaacttattgcatagtctgtaatttaaaaaagaaaattaaa-----ctctctcctctcttcccctcctaaacct 6803427  T
Q  343 ccaatccaaacacac 357  Q
     ||||||||||||||    
T  6803428 tcaatccaaacacac 6803442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 170 - 310
Target Start/End: Complemental strand, 52185207 - 52185060
Alignment:
Q  170 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaatttat 261  Q
    |||| |||||||||||| ||| ||||  ||||||||| |||||||||||||||||||||||||||        |||| || ||||| | | |||||||||    
T  52185207 tttttatttttaaattatggacacta--aaatattttataaaaagttaacatattaacatgataaacaatcatataatacttcaattatatttaatttat 52185110  T
Q  262 tttag-aaaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 310  Q
    ||||| |||||||||||||||| |  |||||||||||| ||||| |||||    
T  52185109 tttagaaaaaacatgttatataatttgtaatttaaaaacgaaaagtaaac 52185060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 170 - 303
Target Start/End: Complemental strand, 55327563 - 55327422
Alignment:
Q  170 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttat 261  Q
    ||||| ||||||||| ||||| | |||||||| ||||||||||||||| | ||||||||| |||||        |||  | ||||||||| || ||||||    
T  55327563 ttttcgtttttaaatcacggacattatgaaatgttttttaaaaagttagcgtattaacataataaacgaacatataatgcttcaatcacatttgatttat 55327464  T
Q  262 tttagaaaaacatgttatatagtccgtaatttaaaaatgaaa 303  Q
    || |||||| |||||||| |||||||||||||||||| ||||    
T  55327463 ttaagaaaagcatgttatgtagtccgtaatttaaaaaagaaa 55327422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 243 - 310
Target Start/End: Original strand, 54574493 - 54574560
Alignment:
Q  243 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 310  Q
    |||||||| ||||||||||||||||||||| |||||||||||| |||||| ||||| |||||| ||||    
T  54574493 tcaatcacgcttaatttattttagaaaaacgtgttatatagtctgtaattaaaaaaagaaaaacaaac 54574560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 122 - 341
Target Start/End: Original strand, 40463874 - 40464096
Alignment:
Q  122 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 221  Q
    ||||||||||||| |  ||||| ||||  ||  |||| || ||| |||||||||||||||||||||||| ||||| || | ||||||||||  |||| |     
T  40463874 gtgtgtttggatgaagggtttatgaggataaacgatgagagtgtgtacttttcatttttaaattacggacactataaattgttttttaaaatattaaaac 40463973  T
Q  222 attaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccct 313  Q
    | ||||||||||||        ||| |  |||||| |||||||||||||||||||||| ||||||| ||| || | ||||| ||| ||||| ||||        
T  40463974 aataacatgataaacaatcatataaaaattcaatctcacttaatttattttagaaaaatatgttatgtagcccttgatttagaaaagaaaagtaaa---- 40464069  T
Q  314 cctctcccctctcttcccctcataaacc 341  Q
     ||||||||||| |||| ||||||||||    
T  40464070 -ctctcccctctattcctctcataaacc 40464096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 121 - 190
Target Start/End: Complemental strand, 34641232 - 34641163
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 190  Q
    ||||||||||||||||  |||||||||||||||||| ||||  | ||||||||| |||||||||||||||    
T  34641232 ggtgtgtttggatggagggtttaggaggggaagggaggggagggcttacttttcttttttaaattacgga 34641163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 249 - 354
Target Start/End: Original strand, 10943752 - 10943852
Alignment:
Q  249 acacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatc 348  Q
    ||||||||||||||||| |||||||| ||  || || |||||||||||||| |||| | ||||     |||||||||||| ||||||||||||  |||||    
T  10943752 acacttaatttattttaaaaaaacattttgcattgttcgtaatttaaaaattaaaagtgaacc-----ctcccctctctttccctcataaaccctcaatc 10943846  T
Q  349 caaaca 354  Q
    ||||||    
T  10943847 caaaca 10943852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 213
Target Start/End: Original strand, 17474209 - 17474301
Alignment:
Q  122 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaat-attttttaaaaa 213  Q
    |||||||||||| ||  ||||||||||| |||  |||| || ||||||||||| ||||||||||||||| | ||| |||| ||||||||||||    
T  17474209 gtgtgtttggattgagggtttaggagggaaagtaatggaaaagtttacttttcttttttaaattacggacattataaaataattttttaaaaa 17474301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 24253970 - 24253895
Alignment:
Q  115 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatg-tttacttttcatttttaaattacgga 190  Q
    ||||| ||||||||||||||||  |||||| ||||||||||| ||||| | |||||||||| |||||||||||||||    
T  24253970 ttttagggtgtgtttggatggagggtttagaaggggaaggga-gggaaggatttacttttcttttttaaattacgga 24253895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 26136044 - 26135952
Alignment:
Q  116 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatttttt 208  Q
    |||| |||||| ||| |||||  ||||||||||||||||||  |||  ||||||||||| ||||||||||||||| | ||| ||||| |||||    
T  26136044 tttaaggtgtgattgaatggagggtttaggaggggaagggagtggagggtttacttttcttttttaaattacggacattataaaataattttt 26135952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 31684398 - 31684362
Alignment:
Q  243 tcaatcacacttaatttattttagaaaaacatgttat 279  Q
    |||||||||||||||||||||||||||||||||||||    
T  31684398 tcaatcacacttaatttattttagaaaaacatgttat 31684362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 124 - 187
Target Start/End: Original strand, 14897981 - 14898044
Alignment:
Q  124 gtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 187  Q
    |||||||||| || |||||||||||||||||||  ||||  |||||||||| ||||||||||||    
T  14897981 gtgtttggattgagagtttaggaggggaagggagaggaaattttacttttcttttttaaattac 14898044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 220644 - 220570
Alignment:
Q  116 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 190  Q
    |||| ||| ||||||||||||  |||||||||| ||||||| ||||   |||||||||| |||||||||||||||    
T  220644 tttagggtctgtttggatggagggtttaggaggagaagggaggggagaatttacttttcttttttaaattacgga 220570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 123 - 213
Target Start/End: Complemental strand, 17474446 - 17474356
Alignment:
Q  123 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaa 213  Q
    ||||||||||| ||  ||| |||||||||||||| ||||  ||| ||||||  ||||||||||||| ||| | | ||||||||||||||||    
T  17474446 tgtgtttggattgagggttgaggaggggaagggaggggagagttaacttttattttttaaattacgaataatgtaaaatattttttaaaaa 17474356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 190
Target Start/End: Complemental strand, 28582732 - 28582682
Alignment:
Q  140 tttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 190  Q
    ||||||||||||||||| ||||  ||||||||||| |||||||||||||||    
T  28582732 tttaggaggggaagggaggggagggtttacttttcttttttaaattacgga 28582682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 121 - 190
Target Start/End: Complemental strand, 41110563 - 41110494
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 190  Q
    ||||||||||||| ||  ||||  ||||||||||||  |||| ||||||||||| |||||||||||||||    
T  41110563 ggtgtgtttggattgagggtttgtgaggggaagggagaggaaggtttacttttcgtttttaaattacgga 41110494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 249 - 356
Target Start/End: Complemental strand, 12790478 - 12790377
Alignment:
Q  249 acacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatc 348  Q
    |||||||||||||| |||||||||||||||||||| |   ||| |||||| ||||| |||||      |||| ||||||||| ||| ||||||  |||||    
T  12790478 acacttaatttattatagaaaaacatgttatatagcctacaatataaaaaagaaaagtaaac------ctcctctctcttcctctcctaaaccctcaatc 12790385  T
Q  349 caaacaca 356  Q
    ||||||||    
T  12790384 caaacaca 12790377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 31894020 - 31894056
Alignment:
Q  243 tcaatcacacttaatttattttagaaaaacatgttat 279  Q
    ||||||||| |||||||||||||||||||||||||||    
T  31894020 tcaatcacatttaatttattttagaaaaacatgttat 31894056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 243 - 315
Target Start/End: Complemental strand, 37237034 - 37236963
Alignment:
Q  243 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 315  Q
    ||||||||||||||||||||||  |||||||| || ||  ||| |||||||||||||||||| ||| ||||||    
T  37237034 tcaatcacacttaatttatttt-caaaaacattttgtagcgtctgtaatttaaaaatgaaaagtaagccctcc 37236963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 208
Target Start/End: Original strand, 13082856 - 13082943
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatttttt 208  Q
    ||||||||||||||||  |||||| || | ||| ||  |||| ||||| |||| ||||||||| |||||| |||||||||| ||||||    
T  13082856 ggtgtgtttggatggagggtttagaagagaaagagagaggaaggtttaatttttatttttaaaatacggacactatgaaatgtttttt 13082943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 190
Target Start/End: Complemental strand, 55428619 - 55428552
Alignment:
Q  123 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 190  Q
    ||||||||||| ||  |||||||||||||||||| ||||   |||||||||| | |||||||||||||    
T  55428619 tgtgtttggattgagggtttaggaggggaagggaggggatgatttacttttcttctttaaattacgga 55428552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 23028168 - 23028086
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatat 203  Q
    ||||||||||||||||  |||| |||||||||  || || |    |||||||| |||||||||||||||| ||||||||||||    
T  23028168 ggtgtgtttggatggagggtttgggaggggaaaagagggcaggacttactttttatttttaaattacggacactatgaaatat 23028086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 187
Target Start/End: Complemental strand, 6803442 - 6803377
Alignment:
Q  122 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 187  Q
    |||||||||||| ||| ||||||||||||||| || | ||  ||||| ||||| ||||||||||||    
T  6803442 gtgtgtttggattgaaggtttaggaggggaagagaggagagagtttaattttcttttttaaattac 6803377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 190
Target Start/End: Original strand, 21773788 - 21773853
Alignment:
Q  125 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 190  Q
    ||||||||| ||| |||||||||||||||||| || |  || |||||||| ||| |||||||||||    
T  21773788 tgtttggattgaaggtttaggaggggaagggaaggaagggtatacttttcttttctaaattacgga 21773853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 24560219 - 24560288
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 190  Q
    |||||||||||||  |  |||||||||||||||||| ||||  ||||  ||||| |||||||||||||||    
T  24560219 ggtgtgtttggattaagggtttaggaggggaagggaggggagggtttgtttttcttttttaaattacgga 24560288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 320
Target Start/End: Complemental strand, 30200160 - 30200123
Alignment:
Q  283 gtccgtaatttaaaaatgaaaaataaaccctcctctcc 320  Q
    |||||||||||||||||||||| |||||||||| ||||    
T  30200160 gtccgtaatttaaaaatgaaaactaaaccctcccctcc 30200123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 320
Target Start/End: Complemental strand, 37102221 - 37102184
Alignment:
Q  283 gtccgtaatttaaaaatgaaaaataaaccctcctctcc 320  Q
    |||||||||||||||||||||| |||||||||| ||||    
T  37102221 gtccgtaatttaaaaatgaaaactaaaccctcccctcc 37102184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 321
Target Start/End: Original strand, 52474088 - 52474125
Alignment:
Q  284 tccgtaatttaaaaatgaaaaataaaccctcctctccc 321  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  52474088 tccgtaatttaaaaataaaaagtaaaccctcctctccc 52474125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 30200312 - 30200264
Alignment:
Q  142 taggaggggaagggatgggaatgtttacttttcatttttaaattacgga 190  Q
    ||||||||||||||| || |  ||||||||||| |||||||||||||||    
T  30200312 taggaggggaagggagggaagggtttacttttcttttttaaattacgga 30200264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 42772087 - 42772047
Alignment:
Q  317 ctcccctctcttcccctcataaacctccaatccaaacacac 357  Q
    |||||||| ||||||||| ||||||| ||||||||||||||    
T  42772087 ctcccctcccttcccctcttaaaccttcaatccaaacacac 42772047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 116; Significance: 7e-59; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 121 - 357
Target Start/End: Original strand, 36347543 - 36347782
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    |||||||||||||| |  |||||||||||||||||| | ||  ||| |||||||||||||| |||||||||||||||| |||||||||||| ||||||||    
T  36347543 ggtgtgtttggatgaagggtttaggaggggaagggaagagagagttcacttttcatttttatattacggatactatgacatattttttaaatagttaaca 36347642  T
Q  221 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 312  Q
    ||||||||||||||        |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||       
T  36347643 tattaacatgataaacaattatataatacttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaagtaaa--- 36347739  T
Q  313 tcctctcccctctcttcccctcataaacctccaatccaaacacac 357  Q
      ||||||| || ||||||||| ||||||  ||||||||||||||    
T  36347740 --ctctcccttcccttcccctcctaaaccctcaatccaaacacac 36347782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 121 - 320
Target Start/End: Complemental strand, 23748337 - 23748130
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    ||||||||||||||||  |||||||||||||||||| ||||  ||| |||||||||||||||| |||||| |||||||||| | ||||||||||||||||    
T  23748337 ggtgtgtttggatggagggtttaggaggggaagggaggggagggttcacttttcatttttaaactacggacactatgaaatgtcttttaaaaagttaaca 23748238  T
Q  221 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 312  Q
    ||||||||||||||        |||| || |||||||||||| ||||||||| |||||||||||||||||||||||| |||||||| ||||| |||||||    
T  23748237 tattaacatgataaacgataatataatacttcaatcacacttgatttatttttgaaaaacatgttatatagtccgtagtttaaaaaagaaaactaaaccc 23748138  T
Q  313 tcctctcc 320  Q
    ||| ||||    
T  23748137 tcccctcc 23748130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 119 - 355
Target Start/End: Original strand, 8426879 - 8427110
Alignment:
Q  119 atggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaa 218  Q
    ||||||| |||| ||||| ||||||||||||||||||| ||||  |||||||||| |||||||||||| ||| |||||||||| ||||||||||||||||    
T  8426879 atggtgtatttgaatggagagtttaggaggggaagggaagggagggtttacttttaatttttaaattaaggacactatgaaatgttttttaaaaagttaa 8426978  T
Q  219 catattaacatgat-aaataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctc 317  Q
    |||  ||| ||||| | |||| || |||||| |||||||||||||||||||||||||||||||| ||| ||| |||||||||||||| ||||     |||    
T  8426979 catgataa-atgatcatataatacttcaatcgcacttaatttattttagaaaaacatgttatatcgtctgtactttaaaaatgaaaagtaaa-----ctc 8427072  T
Q  318 tcccctctcttcccctcataaacctccaatccaaacac 355  Q
    ||||||| ||| ||||| ||||||  ||||||||||||    
T  8427073 tcccctccctttccctcctaaaccctcaatccaaacac 8427110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 158 - 321
Target Start/End: Original strand, 15224733 - 15224904
Alignment:
Q  158 gggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatca 249  Q
    |||| |||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||        |||| || |||||||    
T  15224733 gggagtgtttacttttcatttttaaattacggacactatgaaatgttttttaaaaagctaacatattaacatgataaatgatcatataatacttcaatca 15224832  T
Q  250 cacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctccc 321  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||| ||||| |||||| ||| |||||    
T  15224833 cacttaatttattctagaaaaacatgttatatagcccgtaatttaaaaaagaaaagtaaaccatcccctccc 15224904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 121 - 357
Target Start/End: Original strand, 36046206 - 36046442
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    ||||||||||||||||  ||||||||||||||  || ||||  ||||| ||||||||||||||||||||| ||||  |||| ||||||||||||||||||    
T  36046206 ggtgtgtttggatggagggtttaggaggggaaatgaggggagagtttatttttcatttttaaattacggacactagaaaatgttttttaaaaagttaaca 36046305  T
Q  221 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 312  Q
    |||||||||| |||        |||| || |||||  |||| ||||||||||| |||| |||||||||| ||||||||||||||||  |||| |||||      
T  36046306 tattaacatgttaaatgatcacataatacttcaat--cactcaatttattttataaaagcatgttatatcgtccgtaatttaaaaaacaaaagtaaac-- 36046401  T
Q  313 tcctctcccctctcttcccctcataaacctccaatccaaacacac 357  Q
        |||||||| ||||||||||||||||  ||||||||||||||    
T  36046402 ----ctcccctcccttcccctcataaaccctcaatccaaacacac 36046442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 164 - 309
Target Start/End: Original strand, 39732774 - 39732926
Alignment:
Q  164 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 255  Q
    ||||||||||||||||||||||||| | | |||||||| |||| |||||||||||||||||||||||||||        |||| || ||||||| |||||    
T  39732774 gtttacttttcatttttaaattacgaacattatgaaatgttttataaaaagttaacatattaacatgataaacgatcatataatacttcaatcatactta 39732873  T
Q  256 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaa 309  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||| ||||    
T  39732874 atttattttagaaaaacatg-tatatagtccgtaatttaaaaacgaaaagtaaa 39732926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 121 - 320
Target Start/End: Original strand, 19566822 - 19567030
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatttttt-aaaaagttaac 219  Q
    |||||||||||| |||  |||||| |||| ||| ||  |||  |||||||| ||| ||||||||||| || |||||||||| |||||| ||||||||| |    
T  19566822 ggtgtgtttggacggagtgtttagaagggaaagagaatggagggtttacttctcagttttaaattacagacactatgaaatgtttttttaaaaagttagc 19566921  T
Q  220 atattaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaacc 311  Q
    ||||||| ||||||||        ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||| ||||||    
T  19566922 atattaaaatgataaacggtcgtataatacttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaaatgaaattaaacc 19567021  T
Q  312 ctcctctcc 320  Q
    |||| ||||    
T  19567022 ctcccctcc 19567030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 164 - 320
Target Start/End: Complemental strand, 39821868 - 39821704
Alignment:
Q  164 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaat--------aacacctcaatcacactta 255  Q
    ||||| ||||| ||||||||||||||| ||||||||||| | |||||| ||||||||||||||||||||||||        || || | |||| ||||||    
T  39821868 gtttagttttcttttttaaattacggacactatgaaataatatttaaagagttaacatattaacatgataaatgatcttataatacttaaatcgcactta 39821769  T
Q  256 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcc 320  Q
    ||||||||||||||||||||||||| | ||| ||||||||||||||||| |||||||||| ||||    
T  39821768 atttattttagaaaaacatgttatagaatccataatttaaaaatgaaaagtaaaccctcccctcc 39821704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 162 - 298
Target Start/End: Complemental strand, 16565978 - 16565832
Alignment:
Q  162 atgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacact 253  Q
    |||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||| || |||||||        |||| || |||||||||||    
T  16565978 atgtttactttttatttttaaattacggatactatgaaacgttttttaaaaagttaacatataaatatgataaacgatcatataatacttcaatcacact 16565879  T
Q  254 taatttattttagaaaaacatgt--tatatagtccgtaatttaaaaa 298  Q
    |||||||||||||||||||||||  |||||||| |||||||||||||    
T  16565878 taatttattttagaaaaacatgttatatatagttcgtaatttaaaaa 16565832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 143 - 360
Target Start/End: Original strand, 36566874 - 36567096
Alignment:
Q  143 aggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaa-tattttttaaaaagttaacatattaacatgataa------- 234  Q
    |||||||||||||||| ||   |||||||||||||||||||||||||| | ||||||| | |||| |||||||||||||||||||||||||||           
T  36566874 aggaggggaagggatgagaggatttacttttcatttttaaattacggacattatgaaagttttttataaaaagttaacatattaacatgataaatgatca 36566973  T
Q  235 -ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaa-taaaccctcctctcccctctcttcccc 332  Q
     |||| || ||||||||| |||||||||| ||||||||||||||||||| | | ||||||||||| |||||| ||||   || |||  ||||| ||||||    
T  36566974 tataatacttcaatcacaattaatttattatagaaaaacatgttatataattcataatttaaaaacgaaaaagtaaa---tcatct--cctctattcccc 36567068  T
Q  333 tcataaacctccaatccaaacacactta 360  Q
    || ||||||  |||||||||||||||||    
T  36567069 tcctaaaccctcaatccaaacacactta 36567096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 121 - 298
Target Start/End: Complemental strand, 40022615 - 40022427
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaat-attttttaaaaagttaac 219  Q
    |||||| |||||||||  ||||| |||| ||||||| ||||  |||||| ||||||||||||||||| || ||||||||||  ||||||||||||| |||    
T  40022615 ggtgtgcttggatggagggtttaagaggagaagggaggggagggtttacatttcatttttaaattacagacactatgaaatgtttttttaaaaagtaaac 40022516  T
Q  220 atat--taacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaa 298  Q
    ||||  ||| ||| |||        |||| || ||||||||||||||||||||||| |||||||||||||||||| | |||||||||||    
T  40022515 atattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacatgttatatagttcataatttaaaaa 40022427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 125 - 324
Target Start/End: Complemental strand, 12541999 - 12541796
Alignment:
Q  125 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatt 224  Q
    ||||||||||||  |||||||||  ||||||| ||| |  ||||||||||||    ||||||| |||||||| |||| |||||||||||||||||| |||    
T  12541999 tgtttggatggagggtttaggagaagaaggga-gggtagatttacttttcat----aaattacagatactataaaatgttttttaaaaagttaacacatt 12541905  T
Q  225 aacatgataaa--------taacacctcaatcacacttaatttattttagaaaaac-atgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 315  Q
    |||||||||||        ||  || |||||| ||||||||||||||||||||||  || ||||||||||||||||||||||| ||||| || || ||||    
T  12541904 aacatgataaacgatcatatagtacttcaatcgcacttaatttattttagaaaaaatattttatatagtccgtaatttaaaaaagaaaagtagactctcc 12541805  T
Q  316 tctcccctc 324  Q
     ||||||||    
T  12541804 cctcccctc 12541796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 121 - 235
Target Start/End: Complemental strand, 34209706 - 34209592
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    |||||||||||||| |  |||||| | |||| |||| || |  | ||||||||||||||||||||||  | |||||||||||||||||||||||||||||    
T  34209706 ggtgtgtttggatgaagggtttagaatgggaggggagggaagagattacttttcatttttaaattacaaacactatgaaatattttttaaaaagttaaca 34209607  T
Q  221 tattaacatgataaa 235  Q
    |||||||||||||||    
T  34209606 tattaacatgataaa 34209592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 176 - 310
Target Start/End: Original strand, 28262500 - 28262642
Alignment:
Q  176 tttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttattttaga 267  Q
    ||||||||||| | | ||||||||||||||||||||||||||| ||| ||||||||||||        ||| |  |||||||||  ||||||||||||||    
T  28262500 tttttaaattatgaacactatgaaatattttttaaaaagttaatataataacatgataaacgatcatgtaatatttcaatcacatgtaatttattttaga 28262599  T
Q  268 aaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 310  Q
    ||||||||||||||||||  ||||||||||| ||||| |||||    
T  28262600 aaaacatgttatatagtcaataatttaaaaaagaaaagtaaac 28262642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 122 - 324
Target Start/End: Original strand, 31795772 - 31795982
Alignment:
Q  122 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 221  Q
    |||||||||||||||  ||||| |||| ||||||| ||||    ||||||||| ||||||||||||||| |||||||||  |||||| ||||  ||| ||    
T  31795772 gtgtgtttggatggagggtttatgaggtgaagggaggggaggacttacttttcgtttttaaattacggacactatgaaaagtttttttaaaaaataaaat 31795871  T
Q  222 attaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccct 313  Q
    |  |||||||||||        ||| || ||||||||||||||||||||||| ||||||||||||| || ||||| ||||| ||| ||||| ||| ||||    
T  31795872 aacaacatgataaacgatcatataatacttcaatcacacttaatttattttaaaaaaacatgttatttactccgtgatttagaaaagaaaattaatccct 31795971  T
Q  314 cctctcccctc 324  Q
    ||  |||||||    
T  31795972 cccttcccctc 31795982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 164 - 310
Target Start/End: Complemental strand, 7681443 - 7681293
Alignment:
Q  164 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaac---atattaacatgat-aaataacacctcaatcacacttaattt 259  Q
    |||||||||| ||||||||||| |||||| ||||||||||||||| ||||||||||   ||||  | | ||| | |||| || |||||||||||||||||    
T  7681443 gtttactttttatttttaaattgcggatattatgaaatatttttttaaaagttaacatgatatacaaacgatcatataatacttcaatcacacttaattt 7681344  T
Q  260 attttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 310  Q
    |||||| |||||  | ||||||| ||||||||| |||||||||||| ||||    
T  7681343 attttacaaaaaactattatataatccgtaattaaaaaatgaaaaacaaac 7681293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 121 - 235
Target Start/End: Complemental strand, 9631802 - 9631688
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    ||||||||||||||||  ||||||||||| ||||||   ||  ||| ||||||| ||||||||||||||| || ||||||| |  |||||||||||||||    
T  9631802 ggtgtgtttggatggagggtttaggagggaaagggagaagagggttaacttttcgtttttaaattacggacaccatgaaatgtcctttaaaaagttaaca 9631703  T
Q  221 tattaacatgataaa 235  Q
    |||||||||||||||    
T  9631702 tattaacatgataaa 9631688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 158 - 309
Target Start/End: Original strand, 29525768 - 29525931
Alignment:
Q  158 gggaatgtttacttttcatttttaaattacggatactatgaaatattttttaa--aaagttaacatattaacatgataaa----------taacacctca 245  Q
    |||| |||| |||||||| ||||||||||| ||||||||||| | ||||||    |||||||||||||||||||||||||          ||| || |||    
T  29525768 gggagtgttcacttttcaattttaaattactgatactatgaatttttttttttggaaagttaacatattaacatgataaaaagtattatataatacttca 29525867  T
Q  246 atcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaa 309  Q
    |||||| ||||||||||||| |||||||| ||||||| ||||| ||||||||| ||||||||||    
T  29525868 atcacatttaatttattttaaaaaaacatattatatattccgtgatttaaaaaagaaaaataaa 29525931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 27926752 - 27926681
Alignment:
Q  164 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 235  Q
    ||||| ||||||||||||||||||||||||||| |||| ||  |||||||||||||||||||||||||||||    
T  27926752 gtttatttttcatttttaaattacggatactattaaattttggttaaaaagttaacatattaacatgataaa 27926681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 247 - 357
Target Start/End: Complemental strand, 35736283 - 35736178
Alignment:
Q  247 tcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaa 346  Q
    |||||||| |||||||||||||||||||||||| |||||||| ||||||||| ||||| |||     || |||||||| ||||||||| ||||||  |||    
T  35736283 tcacacttcatttattttagaaaaacatgttatctagtccgtgatttaaaaaagaaaattaa-----cccctcccctcccttcccctcctaaaccctcaa 35736189  T
Q  347 tccaaacacac 357  Q
    |||||||||||    
T  35736188 tccaaacacac 35736178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 170 - 357
Target Start/End: Complemental strand, 9427179 - 9426988
Alignment:
Q  170 ttttcatttttaaattacggatactatgaaatattttttaa-aaagttaacatattaacatgataaa--------taacacctcaatcacacttaattta 260  Q
    ||||||||||||||||||||| ||||| |||| ||||||   ||||||| ||||||| |||||||||        ||| || |||||||| | |||||||    
T  9427179 ttttcatttttaaattacggacactataaaatgtttttttttaaagttagcatattagcatgataaacaaacatataatacttcaatcacgcataattta 9427080  T
Q  261 ttttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 357  Q
     ||| |||||||||||||||||||  |||||||||||| |||||  |||||     ||| |||| ||||||||| ||||| | ||||||||||||||    
T  9427079 gttttgaaaaacatgttatatagttggtaatttaaaaaagaaaatcaaacc-----ctctcctcccttcccctcctaaactttcaatccaaacacac 9426988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 42316809 - 42316880
Alignment:
Q  164 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 235  Q
    |||||||||||||||||||||| |  | |||||||||| ||||||||||||||||| |||||||||||||||    
T  42316809 gtttacttttcatttttaaattgcaaacactatgaaatgttttttaaaaagttaacgtattaacatgataaa 42316880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 270
Target Start/End: Complemental strand, 17379994 - 17379897
Alignment:
Q  181 aaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaa 270  Q
    |||||||||| |||||||||| ||||||||||||||| ||||||||||||||||        |||| ||  |||||||||||||||||||||||||||    
T  17379994 aaattacggacactatgaaatgttttttaaaaagttagcatattaacatgataaacaatcatataatactccaatcacacttaatttattttagaaaa 17379897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 1583272 - 1583222
Alignment:
Q  168 acttttcatttttaaattacggatactatgaaatattttttaaaaagttaa 218  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  1583272 acttttcatttttaaattacggacactatgaaatgttttttaaaaagttaa 1583222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 203 - 294
Target Start/End: Complemental strand, 2241570 - 2241471
Alignment:
Q  203 ttttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaattta 294  Q
    |||||| |||| |||||||||||||||||||||        ||| || ||||| |||||||||||||||||||||||| | |||||||||||||||||||    
T  2241570 tttttttaaaatttaacatattaacatgataaacaatcatataatacttcaattacacttaatttattttagaaaaacgtattatatagtccgtaattta 2241471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 175 - 304
Target Start/End: Original strand, 37739949 - 37740085
Alignment:
Q  175 atttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttattttag 266  Q
    ||||| |||||||| | |||||||| |  |||| |||||||||| ||||||||||||||||        ||| || ||||||||||||||||||||||||    
T  37739949 attttaaaattacgaacactatgaagt--ttttcaaaaagttaagatattaacatgataaacgatcatataatacttcaatcacacttaatttattttag 37740046  T
Q  267 -aaaaacatgttatatagtccgtaatttaaaaatgaaaa 304  Q
     |||||||||||||||| || | |||||||||| |||||    
T  37740047 aaaaaacatgttatataatctggaatttaaaaaagaaaa 37740085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 249 - 298
Target Start/End: Original strand, 9591973 - 9592022
Alignment:
Q  249 acacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaa 298  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  9591973 acacttaatatattttagaaaaacatgttatatagtgcgtaatttaaaaa 9592022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 121 - 190
Target Start/End: Complemental strand, 36347783 - 36347714
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 190  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||||||||||| |||||||||||||||    
T  36347783 ggtgtgtttggattgagggtttaggaggggaagggaagggagagtttacttttcttttttaaattacgga 36347714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 121 - 213
Target Start/End: Complemental strand, 35736429 - 35736337
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaa 213  Q
    ||||||||||||||||  |||||||||| ||||||| ||||  | | ||||||| |||||||||| |||| |||||||||  |||||||||||    
T  35736429 ggtgtgtttggatggagggtttaggaggtgaagggaggggagggctcacttttcgtttttaaatttcggacactatgaaaagttttttaaaaa 35736337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 121 - 212
Target Start/End: Complemental strand, 887351 - 887261
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaa 212  Q
    ||||||| |||||| || |||||||||||||||||| ||||  | ||||||||| |||||||||||||||| |||| |||| ||||| ||||    
T  887351 ggtgtgtctggatg-aaggtttaggaggggaagggaggggagcgcttacttttcttttttaaattacggatgctataaaatgtttttaaaaa 887261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 244 - 315
Target Start/End: Complemental strand, 41841793 - 41841722
Alignment:
Q  244 caatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 315  Q
    ||||||| ||||||||||||||| |||| ||||||||||||  |||||||||||| |||||  |||||||||    
T  41841793 caatcacccttaatttattttaggaaaatatgttatatagttggtaatttaaaaaagaaaatcaaaccctcc 41841722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 45257555 - 45257456
Alignment:
Q  115 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaat-attttttaaaaa 213  Q
    ||||| ||||||||||||||||   ||||||| ||||||||| | ||  ||||||||||| ||||||||||||||||| ||| |||| ||||||| ||||    
T  45257555 ttttagggtgtgtttggatggaggttttaggatgggaagggaggagatggtttacttttcttttttaaattacggatattataaaatgattttttgaaaa 45257456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 243 - 309
Target Start/End: Original strand, 6721754 - 6721820
Alignment:
Q  243 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaa 309  Q
    |||||||||||| |||||||||||||||||||| |||||| |||||  |||||||| ||||| ||||    
T  6721754 tcaatcacacttgatttattttagaaaaacatgctatatattccgtggtttaaaaaagaaaactaaa 6721820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 9426985 - 9427053
Alignment:
Q  119 atggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 187  Q
    ||||||||||||||| |||||||||||||||||||||| | ||  ||||  ||||| ||||||||||||    
T  9426985 atggtgtgtttggattgaaagtttaggaggggaagggaggagagggtttgattttcttttttaaattac 9427053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 15224936 - 15224868
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgg 189  Q
    |||||||||||||  |  |||||||||||||||||| ||||  ||||||||||| ||||||||||||||    
T  15224936 ggtgtgtttggatcaagggtttaggaggggaagggaggggatggtttacttttcttttttaaattacgg 15224868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 17380083 - 17380007
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatg 197  Q
    ||||||||||||| ||  ||||||||||||||| || ||||  ||||  ||||||||||||||||||||| ||||||    
T  17380083 ggtgtgtttggattgagggtttaggaggggaagtgaggggatggtttgattttcatttttaaattacggacactatg 17380007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 121 - 188
Target Start/End: Original strand, 34187577 - 34187644
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacg 188  Q
    ||||||||||||| || |||||||||| |||||| | ||||| ||| |||||| ||||||||||||||    
T  34187577 ggtgtgtttggattgagagtttaggagtggaaggaaggggaaggttcacttttaatttttaaattacg 34187644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 41778885 - 41778807
Alignment:
Q  243 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctccc 321  Q
    ||||||||||||||||||||||| |||||||| |||||  |||| |||||||||    |||| |||||||||| |||||    
T  41778885 tcaatcacacttaatttattttaaaaaaacattttatactgtccataatttaaagtacaaaagtaaaccctcccctccc 41778807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 113 - 190
Target Start/End: Complemental strand, 39732978 - 39732901
Alignment:
Q  113 tgttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 190  Q
    ||||||| ||||||||||||| ||| ||||  |||||||||| | ||||   |||||||||| |||||||||||||||    
T  39732978 tgttttagggtgtgtttggattgaaggtttgagaggggaaggaaagggatgatttacttttcgtttttaaattacgga 39732901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 310
Target Start/End: Complemental strand, 27926669 - 27926613
Alignment:
Q  254 taatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 310  Q
    ||||||||||||||||||||||||||| | |||   ||||||||| |||||||||||    
T  27926669 taatttattttagaaaaacatgttatacaatccagtatttaaaaaagaaaaataaac 27926613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 183
Target Start/End: Complemental strand, 8427110 - 8427051
Alignment:
Q  124 gtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaa 183  Q
    |||||||||| ||  ||||||||||| |||||| ||||  ||||||||||||||||||||    
T  8427110 gtgtttggattgagggtttaggagggaaagggaggggagagtttacttttcatttttaaa 8427051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 22356252 - 22356177
Alignment:
Q  115 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 190  Q
    ||||| ||||||||||||| ||   ||||||||||||||||| ||||  ||| | ||||| |||||||||||||||    
T  22356252 ttttagggtgtgtttggattgaggatttaggaggggaagggaggggagggttcatttttcttttttaaattacgga 22356177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 188
Target Start/End: Original strand, 31061361 - 31061428
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacg 188  Q
    ||||||||||||| ||| |||||||||||||| ||||||||  | | ||||||  |||||||||||||    
T  31061361 ggtgtgtttggattgaaggtttaggaggggaaaggatgggagggctcacttttattttttaaattacg 31061428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 35736172 - 35736246
Alignment:
Q  116 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 190  Q
    |||| ||||||||||||| ||  |||||||||||||||||| ||||  | ||| ||||| ||||||||| |||||    
T  35736172 tttagggtgtgtttggattgagggtttaggaggggaagggaggggaggggttaattttcttttttaaatcacgga 35736246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 283 - 357
Target Start/End: Complemental strand, 36046276 - 36046207
Alignment:
Q  283 gtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 357  Q
    |||||||||||||||||||||||||||     ||||||||||  |||||||| ||||||  | ||||||||||||    
T  36046276 gtccgtaatttaaaaatgaaaaataaa-----ctctcccctcatttcccctcctaaaccctccatccaaacacac 36046207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 315
Target Start/End: Original strand, 39354231 - 39354378
Alignment:
Q  176 tttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttattttaga 267  Q
    ||||||||||||| | | |||||||||||||| ||||| |||| ||| |||||| ||||         ||| || ||||||||||| | |||||||||||    
T  39354231 tttttaaattacgcacattatgaaatatttttaaaaaaattaaaataataacataataatcgatcatgtaatacttcaatcacactaactttattttaga 39354330  T
Q  268 aaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 315  Q
     ||||||||||||||    ||||||||||||  |||| ||||| ||||    
T  39354331 taaacatgttatataacttgtaatttaaaaaaaaaaagtaaactctcc 39354378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 315
Target Start/End: Complemental strand, 887028 - 886958
Alignment:
Q  243 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 315  Q
    |||||||||| |||||||||||| |||| ||| |||||| ||  |||||||||||| ||||| ||| ||||||    
T  887028 tcaatcacacataatttattttaaaaaagcattttatattgt--gtaatttaaaaaagaaaagtaagccctcc 886958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 298
Target Start/End: Original strand, 2381125 - 2381174
Alignment:
Q  249 acacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaa 298  Q
    ||||||||||||||||| |||||||| ||| || || |||||||||||||    
T  2381125 acacttaatttattttaaaaaaacattttacattgttcgtaatttaaaaa 2381174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 214
Target Start/End: Original strand, 16713494 - 16713587
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaag 214  Q
    ||||||||| ||| ||  ||||| |||||||||||| ||||  ||| | |||| |||||||||||||| | | ||| ||||||||||| |||||    
T  16713494 ggtgtgttttgattgagggtttaagaggggaagggaagggatagttcaattttaatttttaaattacgtacaatataaaatatttttttaaaag 16713587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 32503269 - 32503232
Alignment:
Q  245 aatcacacttaatttattttagaaaaacatgttatata 282  Q
    ||||| ||||||||||||||||||||| ||||||||||    
T  32503269 aatcatacttaatttattttagaaaaatatgttatata 32503232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 190
Target Start/End: Complemental strand, 36046443 - 36046375
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 190  Q
    ||||||||||||| ||  ||||| |||||||||||| ||| | ||||||||||  |||||||||||||||    
T  36046443 ggtgtgtttggattgagggtttatgaggggaaggga-ggggaggtttacttttgttttttaaattacgga 36046375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 187
Target Start/End: Original strand, 41841678 - 41841750
Alignment:
Q  115 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 187  Q
    ||||| ||||||||||||| ||   |||||||||| |||||||||||  ||||  ||||| ||||||||||||    
T  41841678 ttttaaggtgtgtttggattgaggatttaggagggaaagggatgggagggtttgattttcttttttaaattac 41841750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 113; Significance: 5e-57; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 121 - 357
Target Start/End: Complemental strand, 54935311 - 54935070
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    ||||||||||||||||  |||||||||||||||||| ||||  ||||| ||||||||||||||||||||| |||||||||| | ||||||||||||| ||    
T  54935311 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtttatttttcatttttaaattacggacactatgaaatgtattttaaaaagttatca 54935212  T
Q  221 tattaacatgataaa---------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaacc 311  Q
    |||||| ||||||||          || || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||    
T  54935211 tattaatatgataaacgatcatataaatacttcaatcacacttaatttattttagaaaaacatgttatatagttcgtaatttaaaaaagaaaagtaaacc 54935112  T
Q  312 ctcctctcccctctcttcccctcataaacctccaatccaaacacac 357  Q
    |||    |||||| ||||||||| ||||||  ||||||||||||||    
T  54935111 ctc----cccctcccttcccctcctaaaccctcaatccaaacacac 54935070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 121 - 314
Target Start/End: Complemental strand, 27735987 - 27735786
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    ||||||||||||||||  |||||||||||||||||| |  |  ||| | ||||||||||||||||||||| ||||| |||| ||||||||| ||||| ||    
T  27735987 ggtgtgtttggatggagggtttaggaggggaagggaggatagggttcatttttcatttttaaattacggacactataaaatgttttttaaagagttagca 27735888  T
Q  221 tattaacatgataaat--------aacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 312  Q
    ||||||||||||||||        || || ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  27735887 tattaacatgataaatgatcatataatacttcaatcacacttaatttattttaaaaaaacatgttatatagtccgtaatttaaaaatgaaaattaaaccc 27735788  T
Q  313 tc 314  Q
    ||    
T  27735787 tc 27735786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 121 - 298
Target Start/End: Complemental strand, 45742132 - 45741947
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    |||||||||||||| |  ||||||| ||| |||||| ||||  ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  45742132 ggtgtgtttggatgaagggtttaggcgggaaagggaggggagagtttacttttcatttttaaattacggacactatgaaatgttttttaaaaagttaaca 45742033  T
Q  221 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaa 298  Q
    ||||||||||||||        |||| || ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  45742032 tattaacatgataaacgatcatataatacttcaatcacatttaatttattttagaaaaacaagttatatagtccgtaatttaaaaa 45741947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 138 - 357
Target Start/End: Original strand, 31348340 - 31348562
Alignment:
Q  138 agtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa-- 235  Q
    |||||| |||||||||||| || |  ||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||      
T  31348340 agtttatgaggggaagggagggaagggtttacttttcatttttaaattacggacactatgaaatgttttttaaaaagctaacatattaacatgataaaca 31348439  T
Q  236 ------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttc 329  Q
          ||| |  |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||| |||||     |||    
T  31348440 atcatataataattcaatcacacataatttattttagaaaaacatgttatatagtccgttatttaaaaaagaaaagtaaaccctcccctccc-----ttc 31348534  T
Q  330 ccctcataaacctccaatccaaacacac 357  Q
    ||||| |||||   ||||||||||||||    
T  31348535 ccctcctaaactctcaatccaaacacac 31348562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 116 - 358
Target Start/End: Original strand, 5730827 - 5731073
Alignment:
Q  116 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 215  Q
    |||| ||||||||||||||||  ||||||||||| ||| |||||||  |||||  ||||||||||||||||||||  |||| ||||||||||| || |||    
T  5730827 tttagggtgtgtttggatggagggtttaggagggaaagagatgggagggtttagatttcatttttaaattacggaccctataaaatattttttgaagagt 5730926  T
Q  216 taacatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaata 307  Q
    |||||||||||||||||||        |||| || ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    |||| ||    
T  5730927 taacatattaacatgataaatgatcatataatacttcaattacacttaatttattttagagaaacatgttatatagtccgtaatttaaa----aaaagta 5731022  T
Q  308 aaccctcctctcccctctcttcccctcataaacctccaatccaaacacact 358  Q
    || |   |||||||||| ||||||||| ||||||  |||| ||||||||||    
T  5731023 aaacaaactctcccctcccttcccctcctaaaccctcaattcaaacacact 5731073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 115 - 357
Target Start/End: Complemental strand, 37711371 - 37711141
Alignment:
Q  115 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaag 214  Q
    ||||| ||||||||||||||||  |||||||||||||||||| ||||  |||||  |||||||||||||||||||| ||||| |||||||              
T  37711371 ttttagggtgtgtttggatggagggtttaggaggggaagggaggggagggtttagatttcatttttaaattacggacactataaaatatt---------- 37711282  T
Q  215 ttaacatattaacatgataa-ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccct 313  Q
      |||||  ||| ||||| | |||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||    
T  37711281 --aacatgataa-atgatcatataatacttcaatcacacttaatttattttagagaaacatgttatatagtccgtaatttaaaaaagaaaaacaaaccct 37711185  T
Q  314 cctctcccctctcttcccctcataaacctccaatccaaacacac 357  Q
    || ||||| || ||||||||| ||||||  ||||||||||||||    
T  37711184 cccctcccttcccttcccctcctaaaccctcaatccaaacacac 37711141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 121 - 315
Target Start/End: Complemental strand, 54320676 - 54320474
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||||  |||| |||||||||||||||| |||||||||  ||||||||||||||| ||    
T  54320676 ggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgattttaatttttaaattacggacactatgaaacgttttttaaaaagttagca 54320577  T
Q  221 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 312  Q
    ||||||||||||||        |||| ||  |||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||  ||||||    
T  54320576 tattaacatgataaacaatcatataatactccaatcacacttaatttattttagaaaaacatgatatatagtcggtaatttaaaaaagaaaatcaaaccc 54320477  T
Q  313 tcc 315  Q
    |||    
T  54320476 tcc 54320474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 121 - 311
Target Start/End: Original strand, 49735470 - 49735668
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||| ||||||||||||||||||||||| |  ||||||| | |||||||||||||||     
T  49735470 ggtgtgtttggattgagggtttaggaggggaagggaggggagggttcacttttcatttttaaattacggacaacatgaaatgtcttttaaaaagttaacc 49735569  T
Q  221 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaacc 311  Q
    ||||||||||||||        |||| |  || ||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||    
T  49735570 tattaacatgataaacgataatataatatttctatcacacttgatttattttagaaaaacatgttatatagtccgtagtttaaaaaagaaaactaaacc 49735668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 121 - 303
Target Start/End: Complemental strand, 41174587 - 41174397
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    ||||||||||||||||  |||||||||||||||||| ||||  ||||| ||||||||||||| ||| ||| ||||||||||  |||||||||||||| ||    
T  41174587 ggtgtgtttggatggagggtttaggaggggaagggaggggatggtttagttttcatttttaatttagggacactatgaaatggtttttaaaaagttagca 41174488  T
Q  221 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaa 303  Q
    ||||||||| ||||        |||| || ||||||||| || |||||||||||||||||||| |||||||||| ||||||||||| ||||    
T  41174487 tattaacataataaatgatcatataatacatcaatcacatttgatttattttagaaaaacatgctatatagtccctaatttaaaaaagaaa 41174397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 127 - 303
Target Start/End: Complemental strand, 35248922 - 35248738
Alignment:
Q  127 tttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaa 226  Q
    ||||||||||  ||||||||| || ||||| ||||  |||||||||||| |||||||||| ||| |||    |||||||||| |||||||||| ||||||    
T  35248922 tttggatggagggtttaggagaggtagggaggggagggtttacttttcaattttaaattatggacactcaagaatatttttttaaaagttaacgtattaa 35248823  T
Q  227 catgataaataac--------acctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaa 303  Q
    ||||||||||||         || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  35248822 catgataaataatcatataatacttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaa 35248738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 182 - 357
Target Start/End: Complemental strand, 26167118 - 26166940
Alignment:
Q  182 aattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaaca 273  Q
    ||||||||| ||| |||||| |||||| || |||||||||||||||||||||||        ||| || ||||||||||||||||||||||||| |||||    
T  26167118 aattacggacactttgaaatgtttttttaagagttaacatattaacatgataaacgatcatataatacttcaatcacacttaatttattttagagaaaca 26167019  T
Q  274 tgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 357  Q
    |||||||||||| |||||||||||| |||||| |||     ||||||||||  |||||||| ||||||  ||||||||||||||    
T  26167018 tgttatatagtctgtaatttaaaaaagaaaaacaaa-----ctctcccctccattcccctcctaaaccctcaatccaaacacac 26166940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 145 - 357
Target Start/End: Original strand, 1968377 - 1968600
Alignment:
Q  145 gaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatat-tttttaa-------aaagttaacatattaacatgataaa- 235  Q
    ||||| |||||| ||||  |||||||||||| | |||||||| ||| |||||||||||| |||||||       |||||||||||||||||||||||||     
T  1968377 gagggaaagggaggggagggtttacttttcaatattaaattatggacactatgaaatatctttttaactttttaaaagttaacatattaacatgataaac 1968476  T
Q  236 -------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctctt 328  Q
           ||| || |||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||     |||| ||||| |||    
T  1968477 gatcatataatacttcaatcacacctgatttattttagaaaaacatattatatagtccgtaatttaaaaatgaaaattaaa-----ctcttccctccctt 1968571  T
Q  329 cccctcataaacctccaatccaaacacac 357  Q
    |||||| ||||||  ||||||||||||||    
T  1968572 cccctcctaaaccctcaatccaaacacac 1968600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 164 - 358
Target Start/End: Original strand, 46007744 - 46007943
Alignment:
Q  164 gtttacttttcatttttaaattacggatactatgaaata--ttttttaaaaagttaacatattaacatgataaat--------aacacctcaatcacact 253  Q
    |||||||||||||||||||||||| || |  ||||||    ||||||||||||||||||||||||||||||||||        || || |||||| ||||    
T  46007744 gtttacttttcatttttaaattaccgacataatgaaaatgtttttttaaaaagttaacatattaacatgataaatgatcatataatacttcaatctcact 46007843  T
Q  254 taatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaac 353  Q
    |||||||||||| ||||||| ||||||||||| | |||||||||| ||||| ||||||     |||||||| ||||||||| ||||||  ||||||||||    
T  46007844 taatttattttacaaaaacaagttatatagtctgcaatttaaaaaagaaaagtaaacc-----ctcccctcccttcccctcctaaaccctcaatccaaac 46007938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 121 - 303
Target Start/End: Original strand, 24565348 - 24565536
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    ||||||||||||||||| |||||||| ||||||    ||||  ||||||||||||||||||||||||||||| || |||||  ||||||||||||||||     
T  24565348 ggtgtgtttggatggaaggtttaggaagggaagactggggagggtttacttttcatttttaaattacggatattacgaaatgctttttaaaaagttaact 24565447  T
Q  221 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaa 303  Q
    ||||||| ||||||        |||| || |||||||| || |  ||||| |||||||||||||||||||| |||||||||||||| ||||    
T  24565448 tattaacgtgataaacaaacatataatacttcaatcacgctca--ttattatagaaaaacatgttatatagcccgtaatttaaaaaagaaa 24565536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 133 - 310
Target Start/End: Complemental strand, 6891590 - 6891405
Alignment:
Q  133 tggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgat 232  Q
    |||| |||||||||||||||| || ||||  ||||  ||||| ||||||||||| ||| |||||||| | ||||| ||||| |||| ||| |||||| ||    
T  6891590 tggatagtttaggaggggaagagaggggagagtttgattttcgtttttaaattatggacactatgaattgtttttaaaaaaattaaaataataacattat 6891491  T
Q  233 aaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 310  Q
    |||        ||| || |||||||||||||||||||||||||||||||||||||||| |  ||| |||||||| |||||||||||    
T  6891490 aaacgatcatataatacttcaatcacacttaatttattttagaaaaacatgttatataatttgtattttaaaaaagaaaaataaac 6891405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 165 - 294
Target Start/End: Complemental strand, 36151773 - 36151637
Alignment:
Q  165 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaa 256  Q
    |||||||||||||||||||||| | | ||||  ||||  ||||||||| ||||||||||||||||||||||        ||| || ||||||||||||||    
T  36151773 tttacttttcatttttaaattatgaacactagaaaatgatttttaaaa-gttaacatattaacatgataaacgatcatataatacttcaatcacacttaa 36151675  T
Q  257 tttattttagaaaaacatgttatatagtccgtaattta 294  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  36151674 tttattttagaaaaacatgttatatagtctgtaattta 36151637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 47433754 - 47433919
Alignment:
Q  164 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacat------gataa-ataacacctcaatcacacttaa 256  Q
    ||||| ||||| ||||||||||| ||| | |||| ||| ||||||||||| |||| ||| ||||||      ||| | |||| || ||||||||||||||    
T  47433754 gtttaattttcgtttttaaattatggacattatggaatgttttttaaaaaattaaaataataacatataaacgatcatataatacttcaatcacacttaa 47433853  T
Q  257 tttattttagaaaaacatgtta-tatagtccgtaatttaaaaatgaaaaataaaccctcctctccc 321  Q
    ||||||||| |||||||||||| ||||||| |||||||||||| ||||| ||||||||||||||||    
T  47433854 tttattttaaaaaaacatgttattatagtctgtaatttaaaaaagaaaagtaaaccctcctctccc 47433919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 121 - 216
Target Start/End: Complemental strand, 6938489 - 6938394
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagtt 216  Q
    ||||||||||||||||| ||||| |||||||| ||| ||||  ||| ||||||||||||||||||||||||| ||| |||| ||||||||||||||    
T  6938489 ggtgtgtttggatggaaggtttatgaggggaatggaggggagggttcacttttcatttttaaattacggatattataaaatgttttttaaaaagtt 6938394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 176 - 284
Target Start/End: Complemental strand, 16400987 - 16400871
Alignment:
Q  176 tttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaatttattttaga 267  Q
    ||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||        |||| || ||||||| | |||||||||||||||    
T  16400987 tttttaaattagggacactatgaaatagtttttaaaaagttaacatattaacatgataaacgatcatataatacttcaatcataattaatttattttaga 16400888  T
Q  268 aaaacatgttatatagt 284  Q
    |||||||||| ||||||    
T  16400887 aaaacatgttgtatagt 16400871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 127 - 321
Target Start/End: Original strand, 17938115 - 17938318
Alignment:
Q  127 tttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaa 226  Q
    ||||||||||  |||||||||||||| ||| || |  ||||| ||||| ||||||||||| ||| | |||| ||| ||||||||||| |||| ||| |||    
T  17938115 tttggatggagggtttaggaggggaatggagggaagagtttaattttcgtttttaaattatggacattatggaatgttttttaaaaatttaaaataataa 17938214  T
Q  227 catgataa--------ataacacctcaatcacacttaatttattt-tagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctc 317  Q
    ||||||||        |||| || |||||||||||||||||||||  | ||||| ||||||||||||  |||||||||||| ||||| ||||| ||| ||    
T  17938215 catgataaacgatcatataatacttcaatcacacttaatttatttaaaaaaaaatatgttatatagtttgtaatttaaaaaagaaaagtaaactctcatc 17938314  T
Q  318 tccc 321  Q
    ||||    
T  17938315 tccc 17938318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 170 - 357
Target Start/End: Complemental strand, 29798478 - 29798291
Alignment:
Q  170 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatt-aacatgataa--------ataacacctcaatcacacttaattta 260  Q
    ||||||||||||||||||||| |||||||||| ||||||||||| ||||||| || ||||| ||||        |||| || |||||||||||| |||||    
T  29798478 ttttcatttttaaattacggacactatgaaatgttttttaaaaaattaacatgttaaacataataaacgatcatataatacttcaatcacacttgattta 29798379  T
Q  261 ttttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 357  Q
        ||||||||||||||||||||| ||||||||||||  |||| ||||     || ||| ||||||||||||| ||||||  ||||||||||||||    
T  29798378 ----agaaaaacatgttatatagtctgtaatttaaaaaataaaagtaaa-----ctatcctctctcttcccctcctaaaccatcaatccaaacacac 29798291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 34111003 - 34110933
Alignment:
Q  164 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 235  Q
    |||||||||| |||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||    
T  34111003 gtttactttttatttttaaattacg-atactgtgaaatgttttttaaaaagttaacatattaacatgataaa 34110933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 164 - 309
Target Start/End: Complemental strand, 44784190 - 44784038
Alignment:
Q  164 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacactta 255  Q
    ||||||||||| ||||||||||||| | |||| |||||||||| ||||  |||||||||||||| | |||||        ||| || |||||||||||||    
T  44784190 gtttacttttcgtttttaaattacgaacactacgaaatattttctaaac-gttaacatattaaccttataaacgatcatataatacttcaatcacactta 44784092  T
Q  256 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaa 309  Q
    ||||| ||||||||||| |||||||| ||  |||||||||||| ||||| ||||    
T  44784091 atttactttagaaaaacctgttatatggtatgtaatttaaaaaagaaaagtaaa 44784038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 139 - 357
Target Start/End: Original strand, 21694910 - 21695129
Alignment:
Q  139 gtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa---- 234  Q
    |||||||||||||||||| ||||  | ||||||||| ||||||||||||||| ||||| ||||  ||||||| || || | |||  || |||||||        
T  21694910 gtttaggaggggaagggacgggagggcttacttttcttttttaaattacggacactataaaatggtttttaataaattgaaataacaaaatgataatgat 21695009  T
Q  235 ---ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttccc 331  Q
       |||| || |||||||||||||||||| || | ||||| |  |||||| |||| ||||||||||  ||||| |||||||||| || |     ||||||    
T  21695010 catataatacttcaatcacacttaattta-ttaaaaaaaataaattatattgtccataatttaaaatagaaaagtaaaccctccgcttc-----cttccc 21695103  T
Q  332 ctcataaacctccaatccaaacacac 357  Q
    |||||||||| |||||||||||||||    
T  21695104 ctcataaacccccaatccaaacacac 21695129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 140 - 285
Target Start/End: Complemental strand, 22659413 - 22659268
Alignment:
Q  140 tttaggaggggaagggatgggaatgtttacttttcattttt-aaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaataa 238  Q
    |||||||||  |||||| | || |||||||||||||||||| ||||||| || || || ||||||||||| |||| |||| |||||||||| ||||| ||    
T  22659413 tttaggaggaaaagggaggagagtgtttacttttcattttttaaattacagacaccataaaatatttttttaaaaattaatatattaacataataaacaa 22659314  T
Q  239 -cacctcaatcacacttaatttattttagaaaaacatgttatatagtc 285  Q
     ||  | |||  |||||||||| |||||| ||||||||||||||||||    
T  22659313 tcatattaat--cacttaatttcttttaggaaaacatgttatatagtc 22659268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 170 - 357
Target Start/End: Original strand, 2247854 - 2248042
Alignment:
Q  170 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttat 261  Q
    ||||||||||||||||||||| | ||| |||| ||| ||||||  ||||| |||||| ||||||||        ||| || |||||||||| || ||| |    
T  2247854 ttttcatttttaaattacggacattataaaatgtttattaaaatcttaacttattaatatgataaacaattatataatacttcaatcacacatatttt-t 2247952  T
Q  262 tttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 357  Q
    ||||||||||||||||||||| || |||||||||||| ||||| ||||     ||||||| || |||| |||| ||||||  ||||||||||||||    
T  2247953 tttagaaaaacatgttatata-tctgtaatttaaaaaagaaaagtaaa-----ctctcccttcacttctcctcctaaaccctcaatccaaacacac 2248042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 121 - 190
Target Start/End: Complemental strand, 31348563 - 31348494
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 190  Q
    ||||||||||||| || ||||||||||||||||||| ||||  ||||||||||| ||||||||| |||||    
T  31348563 ggtgtgtttggattgagagtttaggaggggaagggaggggagggtttacttttcttttttaaataacgga 31348494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 139 - 311
Target Start/End: Original strand, 45132517 - 45132695
Alignment:
Q  139 gtttaggaggggaagggatgggaatgtttacttttcat-----ttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgata 233  Q
    ||||||||| ||||| || ||||  |||||||||||||     |||||||||| | | |||| ||||| |||| ||||||||||||||||||| ||||||    
T  45132517 gtttaggagcggaagagaggggatggtttacttttcataatctttttaaattatgtacactacgaaatgtttt-taaaaagttaacatattaaaatgata 45132615  T
Q  234 a--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaacc 311  Q
    |        |||| || ||||||||||||||||||||||      |||| ||||||||||||||||||||||| ||||| ||||||    
T  45132616 aacgatcatataatacttcaatcacacttaatttatttt------acatattatatagtccgtaatttaaaaaagaaaagtaaacc 45132695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 164 - 309
Target Start/End: Complemental strand, 28333003 - 28332850
Alignment:
Q  164 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacactta 255  Q
    ||||||||||  ||||||||||||  | |||| |||||||||| |||||  ||| ||||||||| || ||||        ||| || ||||||| |||||    
T  28333003 gtttactttttgtttttaaattaccaacactacgaaatattttctaaaacattagcatattaacctggtaaacgatcatataatacttcaatcatactta 28332904  T
Q  256 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaa 309  Q
    ||||| ||||||||||| |||||||||||  |||||||||||| ||||| ||||    
T  28332903 atttactttagaaaaacctgttatatagtatgtaatttaaaaaagaaaagtaaa 28332850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 249 - 357
Target Start/End: Complemental strand, 56135855 - 56135752
Alignment:
Q  249 acacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatc 348  Q
    ||||||||||||||||| |||||||| ||| || || |||||||||||||  |||||| ||||     |||||||| ||||||||| ||||||  |||||    
T  56135855 acacttaatttattttaaaaaaacattttacattgttcgtaatttaaaaaataaaaatgaacc-----ctcccctcccttcccctcctaaaccctcaatc 56135761  T
Q  349 caaacacac 357  Q
    |||||||||    
T  56135760 caaacacac 56135752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 243 - 298
Target Start/End: Original strand, 2917095 - 2917150
Alignment:
Q  243 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaa 298  Q
    ||||||||| | |||||||||||||||| |||||||||||||||| ||||||||||    
T  2917095 tcaatcacaataaatttattttagaaaatcatgttatatagtccggaatttaaaaa 2917150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 164 - 238
Target Start/End: Complemental strand, 36278450 - 36278376
Alignment:
Q  164 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaataa 238  Q
    ||||| ||||| |||||||||||| || |||| ||||||||||||| ||| ||||| |||||| |||||||||||    
T  36278450 gtttagttttcgtttttaaattacagacactacgaaatattttttataaatttaacgtattaatatgataaataa 36278376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 121 - 190
Target Start/End: Complemental strand, 1968601 - 1968532
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 190  Q
    ||||||||||||| ||  |||||||||||||||||| || |  ||||| |||||||||||||||||||||    
T  1968601 ggtgtgtttggattgagggtttaggaggggaagggagggaagagtttaattttcatttttaaattacgga 1968532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 123 - 190
Target Start/End: Original strand, 27735749 - 27735816
Alignment:
Q  123 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 190  Q
    ||||||||||| ||  |||||||||||||||||| | ||  ||||| |||||||||||||||||||||    
T  27735749 tgtgtttggatcgagggtttaggaggggaagggaagagagggtttaattttcatttttaaattacgga 27735816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 122 - 185
Target Start/End: Complemental strand, 46007942 - 46007879
Alignment:
Q  122 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatt 185  Q
    |||||||||||| ||  |||||||||||||||||| ||||  ||||||||||| ||||||||||    
T  46007942 gtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaatt 46007879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 114 - 192
Target Start/End: Complemental strand, 2248050 - 2247972
Alignment:
Q  114 gttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggata 192  Q
    |||| ||||||||||||||| ||  |||||||||| |||| || ||||  ||||||||||| |||||||||||| ||||    
T  2248050 gtttaatggtgtgtttggattgagggtttaggaggagaagtgaagggagagtttacttttcttttttaaattacagata 2247972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 283 - 357
Target Start/End: Original strand, 54935241 - 54935310
Alignment:
Q  283 gtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 357  Q
    ||||||||||||||||||||||||||||||||| |||||     |||||||| ||||||  | ||||||||||||    
T  54935241 gtccgtaatttaaaaatgaaaaataaaccctcccctccc-----ttcccctcctaaaccctccatccaaacacac 54935310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 323
Target Start/End: Complemental strand, 55510407 - 55510202
Alignment:
Q  124 gtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatat 223  Q
    ||||||||||||| |||||| ||||| |||  ||| ||  |||||||||| |||||||||||||| | ||||| |||||||||  ||||| | || |||     
T  55510407 gtgtttggatggagagtttaagagggaaagaaatgtgagggtttactttt-atttttaaattacgaacactataaaatattttaaaaaaattgaa-ataa 55510310  T
Q  224 taacatgataaat--------aacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 315  Q
     |||||||| |||        || || ||| ||||||||||||||||||| |||||||| ||| || |||  ||| ||||||||||||| |||  |||||    
T  55510309 caacatgatgaatgatcatataatacttcagtcacacttaatttattttaaaaaaacattttacattgtctttaaattaaaaatgaaaagtaagtcctcc 55510210  T
Q  316 tctcccct 323  Q
     |||||||    
T  55510209 cctcccct 55510202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 121 - 190
Target Start/End: Complemental strand, 45132737 - 45132668
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 190  Q
    |||||||||| || || |||||||||||||||| || | ||  ||||||||||| |||||||||||||||    
T  45132737 ggtgtgtttgaattgagagtttaggaggggaagagaggagatggtttacttttcttttttaaattacgga 45132668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 166 - 207
Target Start/End: Original strand, 45911327 - 45911368
Alignment:
Q  166 ttacttttcatttttaaattacggatactatgaaatattttt 207  Q
    ||||||||| ||||||||||||||||||||| ||||||||||    
T  45911327 ttacttttcttttttaaattacggatactataaaatattttt 45911368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 54576329 - 54576398
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 190  Q
    ||||||||||||||||  |||||| ||||||||||| ||||  | ||||||||| |||||| ||||||||    
T  54576329 ggtgtgtttggatggagggtttagaaggggaagggaggggagggcttacttttcttttttagattacgga 54576398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 121 - 188
Target Start/End: Original strand, 54935069 - 54935137
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaaggga-tgggaatgtttacttttcatttttaaattacg 188  Q
    ||||||||||||| ||  ||||||||||||||||||  ||||  ||||||||||| |||||||||||||    
T  54935069 ggtgtgtttggattgagggtttaggaggggaagggagggggagggtttacttttcttttttaaattacg 54935137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 304
Target Start/End: Original strand, 31719966 - 31720028
Alignment:
Q  244 caatcacacttaatttattttagaaaa--acatgttatatagtccgtaatttaaaaatgaaaa 304  Q
    |||||||||||||||||||| | ||||  ||||||||||||||  |||||||||||| |||||    
T  31719966 caatcacacttaatttatttaaaaaaaaaacatgttatatagtttgtaatttaaaaaagaaaa 31720028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 315
Target Start/End: Complemental strand, 2247889 - 2247843
Alignment:
Q  269 aaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 315  Q
    |||||| |||||  |||||||||||||||||||||||| ||||||||    
T  2247889 aaacattttataatgtccgtaatttaaaaatgaaaaatgaaccctcc 2247843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 314
Target Start/End: Complemental strand, 6938360 - 6938322
Alignment:
Q  276 ttatatagtccgtaatttaaaaatgaaaaataaaccctc 314  Q
    ||||||||||||||||||||||| |||||||||| ||||    
T  6938360 ttatatagtccgtaatttaaaaaggaaaaataaatcctc 6938322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 267 - 313
Target Start/End: Original strand, 27735901 - 27735947
Alignment:
Q  267 aaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccct 313  Q
    |||||||| |||||  |||||||||||||||||||||||| ||||||    
T  27735901 aaaaacattttatagtgtccgtaatttaaaaatgaaaaatgaaccct 27735947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 187
Target Start/End: Complemental strand, 47433951 - 47433885
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 187  Q
    ||||||||||| | ||  ||||||||||||||||||  |||  ||||||||||| ||||||||||||    
T  47433951 ggtgtgtttgggttgacggtttaggaggggaagggagaggagggtttacttttcttttttaaattac 47433885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 47846303 - 47846233
Alignment:
Q  116 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 186  Q
    |||| ||||||||||||| ||  ||||| |||| ||||||||||||  ||||||||||  |||||||||||    
T  47846303 tttaaggtgtgtttggattgagggtttaagaggagaagggatgggagggtttacttttattttttaaatta 47846233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 283 - 357
Target Start/End: Complemental strand, 49735540 - 49735471
Alignment:
Q  283 gtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 357  Q
    |||||||||||||||||||||| | ||||     |||||||| ||||||||| ||||||  ||||||||||||||    
T  49735540 gtccgtaatttaaaaatgaaaagtgaacc-----ctcccctcccttcccctcctaaaccctcaatccaaacacac 49735471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 303
Target Start/End: Complemental strand, 22921094 - 22921033
Alignment:
Q  243 tcaatcacactta-atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaa 303  Q
    ||||||||||||  ||||||| |||||||||||||||| ||||  |||||||||||| ||||    
T  22921094 tcaatcacactttgatttattctagaaaaacatgttatgtagtttgtaatttaaaaaagaaa 22921033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 303
Target Start/End: Original strand, 22970705 - 22970766
Alignment:
Q  243 tcaatcacactta-atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaa 303  Q
    ||||||||||||  ||||||| |||||||||||||||| ||||  |||||||||||| ||||    
T  22970705 tcaatcacactttgatttattctagaaaaacatgttatgtagtttgtaatttaaaaaagaaa 22970766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 298
Target Start/End: Complemental strand, 34995157 - 34995108
Alignment:
Q  249 acacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaa 298  Q
    |||||||||||||||||||||||||| | | || || |||||||||||||    
T  34995157 acacttaatttattttagaaaaacatttcacattgttcgtaatttaaaaa 34995108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 121 - 209
Target Start/End: Original strand, 37761467 - 37761555
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatttttta 209  Q
    ||||||||||||| || ||||||||||| ||| ||| || |  ||| |||||| |||||||||||||| | |  || ||||||||||||    
T  37761467 ggtgtgtttggattgagagtttaggaggagaaaggagggtagagttcacttttaatttttaaattacgaacaacataaaatatttttta 37761555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 113; Significance: 5e-57; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 123 - 320
Target Start/End: Complemental strand, 8530039 - 8529834
Alignment:
Q  123 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacata 222  Q
    |||||||||||| | ||||||||||||||||||| | ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8530039 tgtgtttggatgaagagtttaggaggggaagggaggtgaaagtttacttttcatttttaaattacggacactatgaaatattttttaaaaagttaacata 8529940  T
Q  223 ttaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctc 314  Q
    |||||||| |||        |||| || ||||||||||||||||||||| | ||||||||||||||||||  |||||||||||| ||||| |||||||||    
T  8529939 ttaacatggtaaacgatcatataatacttcaatcacacttaatttatttaaaaaaaacatgttatatagtttgtaatttaaaaaagaaaagtaaaccctc 8529840  T
Q  315 ctctcc 320  Q
    | ||||    
T  8529839 ccctcc 8529834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 121 - 313
Target Start/End: Original strand, 40094935 - 40095136
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    ||||||||||||||||  |||||||||||||||| | ||||  ||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||    
T  40094935 ggtgtgtttggatggagggtttaggaggggaaggaaggggagggtttacttttcatttttaaattacggacactatgaaatgttttataaaaagttaaca 40095034  T
Q  221 tattaacatgataa--------ataacacctcaatcacacttaatttattttag-aaaaacatgttatatagtccgtaatttaaaaatgaaaaataaacc 311  Q
     |||||||||||||        |||| || |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||| ||||||    
T  40095035 aattaacatgataaacgatcatataatacttcaatcacacttaatttattttagaaaaaacatgttatatagtctgtaatttaaaaacgaaaagtaaacc 40095134  T
Q  312 ct 313  Q
    ||    
T  40095135 ct 40095136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 121 - 357
Target Start/End: Complemental strand, 30010574 - 30010335
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    ||||||||||||||||  |||||| ||||||||||| ||||  |||||||||||||||| |||||||||| |||| ||||| ||||||||| ||||||||    
T  30010574 ggtgtgtttggatggagggtttagaaggggaagggaggggagggtttacttttcattttgaaattacggacactacgaaatgttttttaaatagttaaca 30010475  T
Q  221 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 312  Q
    ||||||||| ||||        |||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||| |     
T  30010474 tattaacattataaacgatcatataatacttcaaccacacttaatttattttagaaaaacatgttatatagtccgtaatttaaacaagaaaagtaaatc- 30010376  T
Q  313 tcctctcccctctcttcccctcataaacctccaatccaaacacac 357  Q
        |||||||| ||||||||| ||||||  ||||||||||||||    
T  30010375 ----ctcccctcccttcccctcctaaaccctcaatccaaacacac 30010335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 116 - 357
Target Start/End: Complemental strand, 12234257 - 12234013
Alignment:
Q  116 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 215  Q
    |||||||||||||||||||||  |||||||||||||||||| ||||  ||||| ||||||||||||||||||||| |||| ||||| ||||||| |||||    
T  12234257 tttatggtgtgtttggatggagggtttaggaggggaagggaggggagggtttagttttcatttttaaattacggacactacgaaatgttttttataaagt 12234158  T
Q  216 taacatattaacatgat--------aaataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaata 307  Q
    || ||||||||||| ||        | || | || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  12234157 tagcatattaacataatatatgatcatattatacatcaatcacacttgatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaatta 12234058  T
Q  308 aaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 357  Q
    | ||     || ||||| ||||||||| ||||||  ||||||||||||||    
T  12234057 agcc-----ctaccctcccttcccctcctaaaccctcaatccaaacacac 12234013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 116 - 358
Target Start/End: Original strand, 38509891 - 38510136
Alignment:
Q  116 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 215  Q
    |||| ||||||||||||| ||  ||||||||||||||||||  |||  ||| ||||||||||||||||||||||| |||||||||| | ||||||||| |    
T  38509891 tttagggtgtgtttggatagagggtttaggaggggaagggagaggagggttcacttttcatttttaaattacggacactatgaaatgtcttttaaaaaat 38509990  T
Q  216 taacatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaata 307  Q
    |||||| |||||| |||||        |||| || |||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||| ||    
T  38509991 taacatcttaacacgataaacgataatataatacttcaatcacacttgatttattttagaaaaacatgttatatagtccgtagtttaaaaaagaaaacta 38510090  T
Q  308 aaccctcctctcccctctcttcccctcataaacctccaatccaaacacact 358  Q
    ||||     |||||||| ||||||||| ||||||   ||||||||||||||    
T  38510091 aacc-----ctcccctcccttcccctcctaaacccttaatccaaacacact 38510136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 116 - 357
Target Start/End: Complemental strand, 41498652 - 41498407
Alignment:
Q  116 tttatggtgtgtttggatggaaagtttaggagggg-aagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaag 214  Q
    |||| |||||||||||||||| ||||||||||||| |||||| ||||   |||||||||||||||||||||||||| |||||||||| |||| |||||||    
T  41498652 tttagggtgtgtttggatggagagtttaggaggggtaagggaggggaggatttacttttcatttttaaattacggacactatgaaatgttttataaaaag 41498553  T
Q  215 ttaacatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaat 306  Q
    ||||||||||||||||||||        |||| || |||||||||||||| ||||  ||||||| ||||||| ||||| | ||||||||||| ||||| |    
T  41498552 ttaacatattaacatgataaacgatcatataatacttcaatcacacttaacttatcgtagaaaatcatgttaaatagttcataatttaaaaacgaaaagt 41498453  T
Q  307 aaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 357  Q
    |||||     |||||||| ||||||||| ||||||  ||||||||||||||    
T  41498452 aaacc-----ctcccctcacttcccctcctaaaccctcaatccaaacacac 41498407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 121 - 353
Target Start/End: Original strand, 2858934 - 2859169
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    ||||||||||||||||  ||||||||||| |||||| ||||  ||||||||||||||| |||||||| ||  ||||||||| || |||||||||||||||    
T  2858934 ggtgtgtttggatggagggtttaggagggaaagggaggggagggtttacttttcatttctaaattacagaccctatgaaatgttatttaaaaagttaaca 2859033  T
Q  221 tattaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 312  Q
    || | |||| |||||        ||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||| ||||||     
T  2859034 tacttacattataaacaatcatataatacttcaatcacacttaatttatttttgaaaaacatgttatatagtccgtaatttaaaaaataaaagtaaacc- 2859132  T
Q  313 tcctctcccctctcttcccctcataaacctccaatccaaac 353  Q
        |||||||| ||||||||| ||||||| ||||||||||    
T  2859133 ----ctcccctcccttcccctcctaaaccttcaatccaaac 2859169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 167 - 357
Target Start/End: Original strand, 32951366 - 32951559
Alignment:
Q  167 tacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatt 258  Q
    |||||||||||||||||||||||| || ||||||| |||| ||||||||||||||||||||||||||||        ||| || ||||||||||||||||    
T  32951366 tacttttcatttttaaattacggacacaatgaaatgttttataaaaagttaacatattaacatgataaacgatcgtataatacttcaatcacacttaatt 32951465  T
Q  259 tattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 357  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||| |||||     ||||||||| ||||| ||| |||||   ||||||||||||||    
T  32951466 tattttagaaaaacatgttctatagtccgtaatttaaaaacgaaaagtaaac-----tctcccctcccttcctctcctaaactctcaatccaaacacac 32951559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 121 - 357
Target Start/End: Original strand, 35349468 - 35349703
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    ||||||||||||||||  ||||| ||||||| |||  ||||  ||||||||||||||||||||||||||| |||  ||||| |||| |||||||||||||    
T  35349468 ggtgtgtttggatggagggtttaagaggggagggg--gggagggtttacttttcatttttaaattacggacact--gaaatgttttataaaaagttaaca 35349563  T
Q  221 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 312  Q
    ||||||||||||||        |||| || ||||| || |||| ||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||     
T  35349564 tattaacatgataaacaatcatataatacttcaataacccttagtttattttagaaaaaaatgttatatagtccgtaatttaaaaacgaaaagtaaacc- 35349662  T
Q  313 tcctctcccctctcttcccctcataaacctccaatccaaacacac 357  Q
        |||||||| ||||||||||||||||   |||||||||||||    
T  35349663 ----ctcccctcccttcccctcataaacccttaatccaaacacac 35349703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 171 - 320
Target Start/End: Original strand, 50744332 - 50744490
Alignment:
Q  171 tttcatttttaaattacggatactatgaaatattttttaaaa-agttaacatattaacatgataaa--------taacacctcaatcacacttaatttat 261  Q
    |||||||||||||||||||| |||||||||| |||||| ||| |||||||||||||||||||||||        ||| || |||||||||||||||||||    
T  50744332 tttcatttttaaattacggacactatgaaatgtttttttaaagagttaacatattaacatgataaacgatcatataatacttcaatcacacttaatttat 50744431  T
Q  262 tttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcc 320  Q
    |||||| |||| ||||||||||||||||||||||||| |||||| ||||||||| ||||    
T  50744432 tttagagaaacctgttatatagtccgtaatttaaaaaagaaaaacaaaccctcccctcc 50744490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 165 - 356
Target Start/End: Complemental strand, 51597866 - 51597672
Alignment:
Q  165 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaa 256  Q
    ||||||||||| |||||||||| | | ||||||||||  ||||||||||||||||||||||| ||||||||        ||| || ||||||||||||||    
T  51597866 tttacttttcaattttaaattatgaacactatgaaatggtttttaaaaagttaacatattaagatgataaacaatcatataatacttcaatcacacttaa 51597767  T
Q  257 tttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacaca 356  Q
    ||||||||| |||||||||||||||||||||| ||||||||| ||||| ||||     |||||||||| |||||  |||||||||  |||||||||||||    
T  51597766 tttattttaaaaaaacatgttatatagtccgtgatttaaaaaagaaaagtaaa-----ctctcccctcccttcctttcataaaccctcaatccaaacaca 51597672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 164 - 315
Target Start/End: Complemental strand, 10392072 - 10391912
Alignment:
Q  164 gtttacttttcatttttaaattacggatactatgaaatatttttt-aaaaagttaacatattaacatgataaa--------taacacctcaatcacactt 254  Q
    ||||||||||| ||||||||||||  | | ||| |||| |||||| |||||||||||||||||||||||||||        ||| || | ||||||| ||    
T  10392072 gtttacttttcgtttttaaattacaaacattattaaatgtttttttaaaaagttaacatattaacatgataaacggtcatataatactttaatcacaatt 10391973  T
Q  255 aatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 315  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  10391972 aatttattttagaaaaacatgtaatatagtccgtaatttaaaaatgaaaagtaaaccctcc 10391912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 164 - 314
Target Start/End: Original strand, 49946633 - 49946791
Alignment:
Q  164 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 255  Q
    ||||| || |||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||        |||| || ||||||||| |||    
T  49946633 gtttatttgtcatttttaaattacggacactataaaatatttttttaaaagttaacatattaacatgataaattatcatataatacttcaatcacattta 49946732  T
Q  256 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctc 314  Q
    |||||||||| |||||||||||||||||||  |  |||||| | ||||| |||||||||    
T  49946733 atttattttaaaaaaacatgttatatagtctctggtttaaacaagaaaagtaaaccctc 49946791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 164 - 319
Target Start/End: Complemental strand, 6563775 - 6563614
Alignment:
Q  164 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa-------taacacctcaatcacacttaa 256  Q
    |||||||||||||||||||||   ||| |||||||| |||||||||| ||||||| ||||||||||||||||       ||| |  ||||| |||| |||    
T  6563775 gtttacttttcatttttaaatcgaggacactatgaactattttttaagaagttaatatattaacatgataaagatcatataataattcaatgacacataa 6563676  T
Q  257 tttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctc 319  Q
    ||||||||||||| ||||||||||||||| || ||||||||| | ||||||||||||||||||    
T  6563675 tttattttagaaagacatgttatatagtctgtcatttaaaaaag-aaaataaaccctcctctc 6563614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 173 - 310
Target Start/End: Original strand, 45585739 - 45585884
Alignment:
Q  173 tcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttatttt 264  Q
    ||||||||||||||  |||||||| |||| |||||| ||||||||||||||||||||||||||        ||  || || |||||||||||||||||||    
T  45585739 tcatttttaaattatagatactataaaatgtttttttaaaagttaacatattaacatgataaacgatcatatagtacttcgatcacacttaatttatttt 45585838  T
Q  265 agaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 310  Q
    | ||||||||||||||||||||||||||| || | ||||| |||||    
T  45585839 aaaaaaacatgttatatagtccgtaattttaagaggaaaagtaaac 45585884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 116 - 235
Target Start/End: Original strand, 43551993 - 43552108
Alignment:
Q  116 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 215  Q
    |||| ||||||||||||||||| ||||||| || ||| ||||| ||  ||||| |||||||||||||||||||     |||||||| |||||||||||||    
T  43551993 tttagggtgtgtttggatggaaggtttaggcggcgaaaggatgtgagggtttatttttcatttttaaattacgt----tatgaaatgttttttaaaaagt 43552088  T
Q  216 taacatattaacatgataaa 235  Q
    ||||||||||||||||||||    
T  43552089 taacatattaacatgataaa 43552108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 262 - 357
Target Start/End: Complemental strand, 26324112 - 26324017
Alignment:
Q  262 tttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 357  Q
    |||||||||||||||||||||||  |||||||||||| |||||  ||||||||| |||||||| ||||||||| ||||||  ||||||||||||||    
T  26324112 tttagaaaaacatgttatatagttggtaatttaaaaaagaaaatcaaaccctcccctcccctcccttcccctcctaaaccctcaatccaaacacac 26324017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 20576136 - 20576247
Alignment:
Q  122 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 221  Q
    |||||||||||| ||  |||||||||||||||||| ||||  |||||  |||||||||||||||||||| ||  |||||| ||||||||| |||||| ||    
T  20576136 gtgtgtttggatagagggtttaggaggggaagggaggggagagtttagatttcatttttaaattacggacac--tgaaatgttttttaaagagttaatat 20576233  T
Q  222 attaacatgataaa 235  Q
    ||||||||||||||    
T  20576234 attaacatgataaa 20576247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 7444736 - 7444623
Alignment:
Q  122 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 221  Q
    ||||||||||||| | ||||||| | |||||| || ||||  ||||| |||||||||| |||||||||| ||||| ||||  ||||||||||||||||||    
T  7444736 gtgtgtttggatgaagagtttagaaagggaagagaggggagggtttagttttcattttaaaattacggacactataaaatgatttttaaaaagttaacat 7444637  T
Q  222 attaacatgataaa 235  Q
    |||||||| |||||    
T  7444636 attaacataataaa 7444623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 150 - 304
Target Start/End: Original strand, 26940874 - 26941036
Alignment:
Q  150 gaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacac 241  Q
    |||| |||||||  ||| |||||| ||||||||||||  || |||||||||||||| || |||||||||| |||||||||  ||||        ||| ||    
T  26940874 gaagagatgggagggttcactttttatttttaaattatagacactatgaaatatttgtttaaaagttaacttattaacatcgtaaacagtcatataatac 26940973  T
Q  242 ctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaa 304  Q
     |||||||||||| ||||||||||||||||||||||||| | |||||| |||||||| |||||    
T  26940974 ttcaatcacacttgatttattttagaaaaacatgttatagaatccgtattttaaaaaagaaaa 26941036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 164 - 278
Target Start/End: Original strand, 36285619 - 36285741
Alignment:
Q  164 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 255  Q
    ||||| || |||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||        |||| || ||||||||||||     
T  36285619 gtttatttatcatttttaaattacgaacactataaaatattttttaaaaagttaacatattaacatgataaacgatcatataatacttcaatcacacttg 36285718  T
Q  256 atttattttagaaaaacatgtta 278  Q
    || ||||||| ||||||||||||    
T  36285719 atatattttaaaaaaacatgtta 36285741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 115 - 234
Target Start/End: Complemental strand, 28770969 - 28770852
Alignment:
Q  115 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaag 214  Q
    ||||| ||||||||||||||||| ||||||||||| || |||  |||  ||||| |||| |||||||||||||  | | |||||||| |||| ||||||     
T  28770969 ttttagggtgtgtttggatggaaggtttaggagggaaaaggagtggagggtttattttttatttttaaattac--acattatgaaatgttttataaaaaa 28770872  T
Q  215 ttaacatattaacatgataa 234  Q
    ||||||||||||||||||||    
T  28770871 ttaacatattaacatgataa 28770852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 32951566 - 32951491
Alignment:
Q  115 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 190  Q
    ||||| ||||||||||||| || |||||||||| |||||||| ||||  ||||||||||| |||||||||||||||    
T  32951566 ttttagggtgtgtttggattgagagtttaggagaggaagggaggggagagtttacttttcgtttttaaattacgga 32951491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 40964798 - 40964726
Alignment:
Q  164 gtttacttttcatttttaaattacggatactatgaaatatt-ttttaaaaagttaacatattaacatgataaa 235  Q
    ||||||||||||||||||||||||||| ||  | ||||||| |||| |||||||||||||||||| |||||||    
T  40964798 gtttacttttcatttttaaattacggacaccgtcaaatattttttttaaaagttaacatattaacgtgataaa 40964726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 243 - 303
Target Start/End: Original strand, 44211037 - 44211097
Alignment:
Q  243 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaa 303  Q
    ||||||||||||||||||||||||||||||| ||||||||| | |||||||| ||| ||||    
T  44211037 tcaatcacacttaatttattttagaaaaacacgttatatagactgtaatttataaaagaaa 44211097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 243 - 320
Target Start/End: Original strand, 2470867 - 2470944
Alignment:
Q  243 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcc 320  Q
    ||||||||| ||| | ||||||||||||||||||||||||||   ||||||||||| ||||| |||||| ||| ||||    
T  2470867 tcaatcacaattagtgtattttagaaaaacatgttatatagttgataatttaaaaaagaaaagtaaaccttcccctcc 2470944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 164 - 271
Target Start/End: Complemental strand, 41676480 - 41676363
Alignment:
Q  164 gtttacttttcatttttaaattacggatactatgaaatattttttaaa--aagttaacatattaacatgataa--------ataacacctcaatcacact 253  Q
    ||||||||||||||||||||||||||| ||||| |||| ||||||     || ||||||||||||||||||||        |||| ||  ||||||||||    
T  41676480 gtttacttttcatttttaaattacggacactataaaatgtttttttttttaaattaacatattaacatgataaacgatcatataatactacaatcacact 41676381  T
Q  254 taatttattttagaaaaa 271  Q
    ||||||||||||||||||    
T  41676380 taatttattttagaaaaa 41676363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 249 - 309
Target Start/End: Original strand, 43553068 - 43553129
Alignment:
Q  249 acacttaatttattttagaaaaacatgttatatagtccgt-aatttaaaaatgaaaaataaa 309  Q
    ||||||||||||||||||| ||||| |||||||| ||||| |||||||||||||||| ||||    
T  43553068 acacttaatttattttagagaaacaagttatataatccgtaaatttaaaaatgaaaagtaaa 43553129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 126 - 190
Target Start/End: Complemental strand, 2859169 - 2859105
Alignment:
Q  126 gtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 190  Q
    |||||||| ||| |||||||||||||||||| ||||  ||||||||||  |||||||||||||||    
T  2859169 gtttggattgaaggtttaggaggggaagggaggggagggtttacttttattttttaaattacgga 2859105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 23536777 - 23536844
Alignment:
Q  116 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaa 183  Q
    |||||||||||||||||||||   ||||||||| |||||||||||| |||||| |||||  |||||||    
T  23536777 tttatggtgtgtttggatggaggatttaggaggagaagggatgggagtgtttaattttctattttaaa 23536844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 35349709 - 35349635
Alignment:
Q  116 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 190  Q
    |||| |||||||||||||  |  ||||| |||||||||||| ||||  ||||||||||| |||||||||||||||    
T  35349709 tttagggtgtgtttggattaagggtttatgaggggaagggaggggagggtttacttttcgtttttaaattacgga 35349635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 30010334 - 30010403
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 190  Q
    ||||||||||||| ||  |||||||||||||||||| ||||   |||||||||| | |||||||||||||    
T  30010334 ggtgtgtttggattgagggtttaggaggggaagggaggggaggatttacttttcttgtttaaattacgga 30010403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 41498406 - 41498471
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 186  Q
    ||||||||||||| ||  ||||||||||||||| || ||||  ||||||||||| |||||||||||    
T  41498406 ggtgtgtttggattgagggtttaggaggggaagtgaggggagggtttacttttcgtttttaaatta 41498471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 116 - 208
Target Start/End: Original strand, 2470727 - 2470819
Alignment:
Q  116 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatttttt 208  Q
    |||| ||||||||||||||||  ||||||||||||||| ||  |||  ||||  ||| ||||||||||||||| | ||||| |||| ||||||    
T  2470727 tttagggtgtgtttggatggagggtttaggaggggaagagaatggagggtttcgtttacatttttaaattacgaacactataaaatgtttttt 2470819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 121 - 213
Target Start/End: Complemental strand, 2506781 - 2506689
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaa 213  Q
    |||||||||||||||| ||||||| || |||||||| | ||    ||| ||||| |||||||||||| |||| ||| ||||| ||||||||||    
T  2506781 ggtgtgtttggatggagagtttagaagaggaagggaggagatgacttagttttcttttttaaattacagatattataaaataatttttaaaaa 2506689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 315
Target Start/End: Original strand, 41676437 - 41676485
Alignment:
Q  267 aaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 315  Q
    |||||||| |||||  |||||||||||||||||||||| ||||||||||    
T  41676437 aaaaacattttatagtgtccgtaatttaaaaatgaaaagtaaaccctcc 41676485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 35513037 - 35512974
Alignment:
Q  123 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 186  Q
    ||||||||||||||  |||||||||||||||||| ||||  | ||||||||  |||||||||||    
T  35513037 tgtgtttggatggagggtttaggaggggaagggaggggagggcttacttttattttttaaatta 35512974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 140 - 190
Target Start/End: Original strand, 10391893 - 10391943
Alignment:
Q  140 tttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 190  Q
    |||||||||||||  || ||||  |||||||||||||||||||||||||||    
T  10391893 tttaggaggggaaacgaggggagggtttacttttcatttttaaattacgga 10391943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 108 - 190
Target Start/End: Original strand, 12233999 - 12234081
Alignment:
Q  108 atggttgttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 190  Q
    |||||| ||| | ||||||||||||| ||  |||||||||||||||||| || |  | ||| ||||| |||||||||||||||    
T  12233999 atggttttttaagggtgtgtttggattgagggtttaggaggggaagggagggtagggcttaattttcttttttaaattacgga 12234081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 283 - 357
Target Start/End: Original strand, 12234182 - 12234251
Alignment:
Q  283 gtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 357  Q
    |||||||||||||||||||||| |||||||||| |||||     |||||||| ||||||  | ||||||||||||    
T  12234182 gtccgtaatttaaaaatgaaaactaaaccctcccctccc-----ttcccctcctaaaccctccatccaaacacac 12234251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 283 - 321
Target Start/End: Complemental strand, 38509966 - 38509928
Alignment:
Q  283 gtccgtaatttaaaaatgaaaaataaaccctcctctccc 321  Q
    |||||||||||||||||||||| | ||||||||||||||    
T  38509966 gtccgtaatttaaaaatgaaaagtgaaccctcctctccc 38509928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 298
Target Start/End: Original strand, 1085628 - 1085677
Alignment:
Q  249 acacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaa 298  Q
    ||||||||||||||||| |||||||| ||| || || |||||||||||||    
T  1085628 acacttaatttattttaaaaaaacattttacatggttcgtaatttaaaaa 1085677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 170
Target Start/End: Complemental strand, 20607459 - 20607410
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttact 170  Q
    ||||||||||||||||  |||||||||||||||||| ||||  |||||||    
T  20607459 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtttact 20607410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 190
Target Start/End: Complemental strand, 25268510 - 25268437
Alignment:
Q  117 ttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 190  Q
    ||||||| | ||||||||||  |||||| |||||||| || ||||  ||||||||| | |||||||||||||||    
T  25268510 ttatggtatatttggatggagggtttagaaggggaagtgaggggagggtttactttccttttttaaattacgga 25268437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 218
Target Start/End: Original strand, 40709294 - 40709391
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaa 218  Q
    |||||||||||||  || ||||| ||||||||||||  |||    ||||||||| ||||||||||||| ||| ||| ||||| |||||| ||| ||||    
T  40709294 ggtgtgtttggatttaaggtttaagaggggaagggagaggaggacttacttttcttttttaaattacgaatattataaaataatttttagaaaattaa 40709391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 314
Target Start/End: Complemental strand, 49946682 - 49946629
Alignment:
Q  261 ttttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctc 314  Q
    ||||| ||||| || |||||  ||||||||||||||||||| ||||||||||||    
T  49946682 ttttaaaaaaatattttatagtgtccgtaatttaaaaatgacaaataaaccctc 49946629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 190
Target Start/End: Original strand, 7444481 - 7444549
Alignment:
Q  122 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 190  Q
    ||||||| |||| ||  |||| ||||| ||||||| ||||  ||||||||||| |||||||||||||||    
T  7444481 gtgtgttaggattgagggtttgggaggagaagggaagggagggtttacttttcttttttaaattacgga 7444549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 35349536 - 35349504
Alignment:
Q  283 gtccgtaatttaaaaatgaaaaataaaccctcc 315  Q
    |||||||||||||||||||||| ||||||||||    
T  35349536 gtccgtaatttaaaaatgaaaagtaaaccctcc 35349504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 38510135 - 38510067
Alignment:
Q  122 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 190  Q
    ||||||||||||  |  |||||||||||||||||| ||||  ||||| ||||| |||||||| ||||||    
T  38510135 gtgtgtttggattaagggtttaggaggggaagggaggggagggtttagttttcttttttaaactacgga 38510067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 40095005 - 40094973
Alignment:
Q  283 gtccgtaatttaaaaatgaaaaataaaccctcc 315  Q
    |||||||||||||||||||||| ||||||||||    
T  40095005 gtccgtaatttaaaaatgaaaagtaaaccctcc 40094973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 286 - 314
Target Start/End: Complemental strand, 43552065 - 43552037
Alignment:
Q  286 cgtaatttaaaaatgaaaaataaaccctc 314  Q
    |||||||||||||||||||||||||||||    
T  43552065 cgtaatttaaaaatgaaaaataaaccctc 43552037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 319
Target Start/End: Complemental strand, 49832659 - 49832583
Alignment:
Q  243 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctc 319  Q
    ||||||||||||| ||||||||  |||||||  ||||||  || |||||||||||| ||||| ||| | ||||||||    
T  49832659 tcaatcacacttattttatttttaaaaaacactttatattatctgtaatttaaaaaagaaaagtaagctctcctctc 49832583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 112; Significance: 2e-56; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 121 - 357
Target Start/End: Complemental strand, 13634953 - 13634714
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  | ||||||||||||||||||||||| | |||||||||| ||||||||||||||||||    
T  13634953 ggtgtgtttggattgagggtttaggaggggaagggaggggaggggttacttttcatttttaaattacgaacactatgaaatgttttttaaaaagttaaca 13634854  T
Q  221 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 312  Q
    ||||||||||||||        |||| |  |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||     
T  13634853 tattaacatgataaacgatcatataataattcaatcacacataatttattttagaaaaacatgttatatagtccgttatttaaaaaagaaaagtaaacc- 13634755  T
Q  313 tcctctcccctctcttcccctcataaacctccaatccaaacacac 357  Q
        |||||||| ||||||||| ||||||  ||||||||||||||    
T  13634754 ----ctcccctcccttcccctcctaaaccctcaatccaaacacac 13634714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 116 - 330
Target Start/End: Complemental strand, 7544383 - 7544161
Alignment:
Q  116 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 215  Q
    |||| ||||||||||||||||  |||||||||||||||| | ||||  ||||  ||||||||||||||||||||| |||||||||| |||||||||||||    
T  7544383 tttaaggtgtgtttggatggagggtttaggaggggaaggaaggggagggtttggttttcatttttaaattacggacactatgaaatgttttttaaaaagt 7544284  T
Q  216 taacatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaata 307  Q
    || ||||||||||| ||||        |||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |     
T  7544283 tagcatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaattt 7544184  T
Q  308 aaccctcctctcccctctcttcc 330  Q
    | |||||| ||||| || |||||    
T  7544183 agccctcccctcccttcccttcc 7544161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 116 - 321
Target Start/End: Complemental strand, 10650661 - 10650463
Alignment:
Q  116 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 215  Q
    |||| ||||||||||||| |||||||| ||||||||||||| | ||| ||||||||||  |||||||||||||||||||||||||| |||| ||||||||    
T  10650661 tttagggtgtgtttggattgaaagtttgggaggggaagggaggagaaagtttactttttgtttttaaattacggatactatgaaatgttttataaaaagt 10650562  T
Q  216 taacatattaacatgataaataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 315  Q
    |||||||||| ||||||       || |||||||||||||||||||||||||||||||| | |||  ||||||||||||||||| |||| |||| |||||    
T  10650561 taacatattaccatgat-------acttcaatcacacttaatttattttagaaaaacatttcatagtgtccgtaatttaaaaataaaaagtaaatcctcc 10650469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 121 - 326
Target Start/End: Complemental strand, 26415136 - 26414922
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggagggg-aagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaac 219  Q
    ||||||||||||||||  ||||| |||||| || ||| ||||  ||||||||||||||||||| |||| || |||||||||| |||| ||||||||||||    
T  26415136 ggtgtgtttggatggagggtttatgagggggaaaggaggggagagtttacttttcatttttaagttacagacactatgaaatgttttataaaaagttaac 26415037  T
Q  220 atattaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaacc 311  Q
    ||||||||||||||||        ||| || ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||| ||||||    
T  26415036 atattaacatgataaacgaccatataatacttcaatcacacttaatatattttagaaaaacatgtcatatagtccgtaatttaaaaacgaaaagtaaacc 26414937  T
Q  312 ctcctctcccctctc 326  Q
    |||| ||||| ||||    
T  26414936 ctcccctcccttctc 26414922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 121 - 357
Target Start/End: Complemental strand, 16938721 - 16938482
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    ||||||||||||||||  ||||||||| |||| ||| ||||  |||||  ||||||||||||||||| || |||||||||| ||||||||| ||||||||    
T  16938721 ggtgtgtttggatggagggtttaggagaggaatggaggggagggtttagatttcatttttaaattactgacactatgaaatgttttttaaagagttaaca 16938622  T
Q  221 tattaacatgataaat--------aacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 312  Q
    | ||||||||||||||        || |  ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||| |||||     
T  16938621 tgttaacatgataaatgatcatataatatttcaatcacacttaatttattttagagaaacatgttatatagtccgtaacttaaaaaagaaaaacaaacc- 16938523  T
Q  313 tcctctcccctctcttcccctcataaacctccaatccaaacacac 357  Q
        |||||||| ||||||||| ||||||  ||||||||||||||    
T  16938522 ----ctcccctcccttcccctcctaaaccctcaatccaaacacac 16938482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 121 - 293
Target Start/End: Original strand, 8502837 - 8503017
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    ||||||||||||||||  ||||| || ||||| ||||||||  ||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  8502837 ggtgtgtttggatggatggtttatgaagggaatggatgggagggttcacttttcatttttaaattacggacattatgaaatattttttaaaaagttaaca 8502936  T
Q  221 tattaacatga--------taaataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaattt 293  Q
     ||||| ||||        || |||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  8502937 aattaatatgatacacaattacataatacttcaatcacacttaatttattttagaaaagcatgttatatagtccgtaattt 8503017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 124 - 320
Target Start/End: Complemental strand, 36363271 - 36363067
Alignment:
Q  124 gtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatat 223  Q
    |||||||||||||  |||||||||||||||||| | ||  ||| ||||||||||||||||||||||||||||| |||| | ||||| |||||||||||||    
T  36363271 gtgtttggatggagggtttaggaggggaagggaggagagagttcacttttcatttttaaattacggatactataaaatgtcttttagaaagttaacatat 36363172  T
Q  224 taacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 315  Q
    || ||||||||        |||| || ||||| |||||| ||||||||||||||||||||||||||||| |||| |||||| | ||||| ||||| ||||    
T  36363171 tagcatgataaacaatgatataaaacttcaatgacacttgatttattttagaaaaacatgttatatagtacgtagtttaaacaagaaaattaaactctcc 36363072  T
Q  316 tctcc 320  Q
     ||||    
T  36363071 cctcc 36363067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 121 - 314
Target Start/End: Original strand, 28279478 - 28279680
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    ||||||||||||||||  |||| ||| ||||| ||  | |||  |||||||||||||||||||||| ||| | |||||||| ||||||||||||||||||    
T  28279478 ggtgtgtttggatggagggtttgggatgggaaagggggtgaaaatttacttttcatttttaaattatggacattatgaaatgttttttaaaaagttaaca 28279577  T
Q  221 tattaacatgataa--------ataacacctcaatcacacttaatttattttag-aaaaacatgttatatagtccgtaatttaaaaatgaaaaataaacc 311  Q
    ||||||||||||||        |||| || ||||||||||||| |||||||||| |||||||||||||||| ||| ||||||||||| ||||| ||||||    
T  28279578 tattaacatgataaatgatcatataatacttcaatcacacttagtttattttagaaaaaacatgttatatattccataatttaaaaaggaaaagtaaacc 28279677  T
Q  312 ctc 314  Q
    |||    
T  28279678 ctc 28279680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 171 - 320
Target Start/End: Complemental strand, 9857072 - 9856915
Alignment:
Q  171 tttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttatt 262  Q
    |||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||| |||||        ||| || |||||||||||| |||||||    
T  9857072 tttcatttttaagttacggacactatgaaatgttttttaaaaagttaacatattaacataataaacgatcatataatacttcaatcacacttgatttatt 9856973  T
Q  263 ttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcc 320  Q
    |||||||||||||||||||||||| ||||||||||| ||||| ||||| |||| ||||    
T  9856972 ttagaaaaacatgttatatagtccttaatttaaaaaagaaaactaaactctcccctcc 9856915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 121 - 321
Target Start/End: Complemental strand, 37607136 - 37606929
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    ||||||||||||||||  ||||| ||||| ||||||   ||  |||||||||||||||||||| ||| ||||||||||||| |||| |||||||||||||    
T  37607136 ggtgtgtttggatggagggtttacgagggaaagggagatgatggtttacttttcatttttaaaatacagatactatgaaatgttttataaaaagttaaca 37607037  T
Q  221 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 312  Q
    ||||||||||||||        |||| || |||||||||  |||||||||||| |||||||| ||||||||||| ||||||||||| ||||| ||||| |    
T  37607036 tattaacatgataaacgatcatataatacttcaatcacatataatttattttaaaaaaacat-ttatatagtccttaatttaaaaacgaaaagtaaactc 37606938  T
Q  313 tcctctccc 321  Q
    || ||||||    
T  37606937 tcatctccc 37606929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 164 - 315
Target Start/End: Original strand, 4373611 - 4373770
Alignment:
Q  164 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 255  Q
    |||||||||| |||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||        |||| |  |||||||||||||    
T  4373611 gtttacttttaatttttaaattacggacactgtgaaatatttttttaaaagttaacatattaacatgataaatgatcatataatatttcaatcacactta 4373710  T
Q  256 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 315  Q
    |||||||||  |||||| ||||||||||||||||||||||||| ||||| |||| |||||    
T  4373711 atttatttttaaaaaacttgttatatagtccgtaatttaaaaaagaaaagtaaatcctcc 4373770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 116 - 314
Target Start/End: Complemental strand, 10476275 - 10476067
Alignment:
Q  116 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 215  Q
    |||| ||||||||||||||||  |||||||||||||||||| |||| ||||||||| | ||||||||||||||   |||||||||||||| | |||||      
T  10476275 tttagggtgtgtttggatggagggtttaggaggggaagggaggggagtgtttacttataatttttaaattacgaccactatgaaatatttataaaaaaaa 10476176  T
Q  216 taacatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgt-tatatagtccgtaa-tttaaaaatgaaaaa 305  Q
     |||||||||| |||||||        |||| || |||||||||||||||||||||||||||||||||| |||||| || |||| |||||||| |||||     
T  10476175 aaacatattaagatgataaacgattatataatacttcaatcacacttaatttattttagaaaaacatgtatatataatctgtaattttaaaaaagaaaag 10476076  T
Q  306 taaaccctc 314  Q
    |||||||||    
T  10476075 taaaccctc 10476067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 122 - 309
Target Start/End: Original strand, 9798615 - 9798810
Alignment:
Q  122 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 221  Q
    |||||||||||||||   |||||||||  |||||||| ||  |||||||||||||||||||||||||||||||| ||||| ||||||||||||| || ||    
T  9798615 gtgtgtttggatggaggatttaggaggaaaagggatgtgagagtttacttttcatttttaaattacggatactacgaaatgttttttaaaaagtcaatat 9798714  T
Q  222 attaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaa 309  Q
     ||||||||| ||        |||| || ||||||||| ||||||||||| |||||||||||||||||| || ||||||| |||| ||||| ||||    
T  9798715 tttaacatgaaaaacgatcatataatacttcaatcacaattaatttatttaagaaaaacatgttatataatctgtaattttaaaaagaaaagtaaa 9798810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 164 - 355
Target Start/End: Original strand, 36392195 - 36392388
Alignment:
Q  164 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 255  Q
    |||||||||||||||||||||||| || |||||||||| |||| |||||||||||||||||||||||||||        |||| || |||||||||||||    
T  36392195 gtttacttttcatttttaaattacagacactatgaaatgttttataaaaagttaacatattaacatgataaacgatcatataatacttcaatcacactta 36392294  T
Q  256 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacac 355  Q
    || |||||||| |||| || ||||||||||||||||||||||| |||| |||||     | | || ||||||||||||| ||||||  ||||||||||||    
T  36392295 atctattttag-aaaatatattatatagtccgtaatttaaaaacgaaatataaa-----cacaccgctctcttcccctcctaaaccctcaatccaaacac 36392388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 164 - 309
Target Start/End: Original strand, 10072692 - 10072845
Alignment:
Q  164 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 255  Q
    ||||||||||||| ||||||||  |  ||||||||||||||||||||||||||||||||||||||||||||        |||| || ||||||| |||||    
T  10072692 gtttacttttcatatttaaattgtgagtactatgaaatattttttaaaaagttaacatattaacatgataaacgatcatataatacttcaatcatactta 10072791  T
Q  256 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaa 309  Q
    |||||||||||||||||||||||||  ||| |||||||||||| ||||| ||||    
T  10072792 atttattttagaaaaacatgttataccgtcggtaatttaaaaaagaaaagtaaa 10072845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 121 - 321
Target Start/End: Complemental strand, 37779345 - 37779139
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    ||||||||||||||||  ||||| ||||| ||||||   ||  |||||||||||||||||||| ||| ||||||||||||| |||| |||||||||||||    
T  37779345 ggtgtgtttggatggagggtttacgagggaaagggagatgatggtttacttttcatttttaaactacagatactatgaaatgttttataaaaagttaaca 37779246  T
Q  221 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 312  Q
    ||||||||||||||        |||| || |||||||||  |||||||||||| |||||||| ||| ||||||| ||||||||||| ||||| ||||| |    
T  37779245 tattaacatgataaacgatcatataatacttcaatcacatataatttattttaaaaaaacat-tta-atagtccttaatttaaaaacgaaaagtaaactc 37779148  T
Q  313 tcctctccc 321  Q
    || ||||||    
T  37779147 tcatctccc 37779139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 121 - 221
Target Start/End: Complemental strand, 1658055 - 1657955
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    ||||||||||||||||  |||||||||||||||||| ||||  ||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||    
T  1658055 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatttttaaattacggacactataaaatgttttttaaaaagttaaca 1657956  T
Q  221 t 221  Q
    |    
T  1657955 t 1657955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 121 - 235
Target Start/End: Original strand, 14245090 - 14245204
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    ||||||||||||| ||  |||||||||||||||||| ||||   |||||||||| ||||||||||||||| ||| |||||| ||||||| ||||||||||    
T  14245090 ggtgtgtttggattgagggtttaggaggggaagggaggggaggatttacttttcttttttaaattacggacactgtgaaatgttttttagaaagttaaca 14245189  T
Q  221 tattaacatgataaa 235  Q
    |||||||||||||||    
T  14245190 tattaacatgataaa 14245204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 121 - 310
Target Start/End: Complemental strand, 37551647 - 37551453
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    ||||||||||||||||  ||||| ||||| ||||||  |||  |||||||||||||||||||| ||| || |||  ||||| |||| |||||||||||||    
T  37551647 ggtgtgtttggatggagggtttacgagggaaagggagaggatggtttacttttcatttttaaactacagacact--gaaatgttttataaaaagttaaca 37551550  T
Q  221 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 310  Q
    ||||||||||||||        |||| || |||||||||| |||||||||||  |||||| | ||||||||||| ||||||||||| ||||| |||||    
T  37551549 tattaacatgataaacgatcatataatacttcaatcacacataatttatttttaaaaaac-ttttatatagtccataatttaaaaacgaaaagtaaac 37551453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 121 - 310
Target Start/End: Complemental strand, 37654477 - 37654283
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    ||||||||||||||||  ||||| ||||| ||||||  |||  |||||||||||||||||||| ||| || |||  ||||| |||| |||||||||||||    
T  37654477 ggtgtgtttggatggagggtttacgagggaaagggagaggatggtttacttttcatttttaaactacagacact--gaaatgttttataaaaagttaaca 37654380  T
Q  221 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 310  Q
    ||||||||||||||        |||| || |||||||||| |||||||||||  |||||| | ||||||||||| ||||||||||| ||||| |||||    
T  37654379 tattaacatgataaacgatcatataatacttcaatcacacataatttatttttaaaaaac-ttttatatagtccataatttaaaaacgaaaagtaaac 37654283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 170 - 324
Target Start/End: Original strand, 20146917 - 20147088
Alignment:
Q  170 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatc----------aca 251  Q
    ||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||        |||| |  ||||||          |||    
T  20146917 ttttcatttttaaattacggtcactatgaaatgttttttaaaaagttaacatattaacatgataagcgatcatataatatttcaatcacacttaattaca 20147016  T
Q  252 cttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctc 324  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||  |||||||    
T  20147017 cttaatttattttagaaaaacatg-tatataatccgtaatttaaaaatgaaaagtaaaccctcccttcccctc 20147088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 165 - 357
Target Start/End: Original strand, 16501836 - 16502033
Alignment:
Q  165 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaa 256  Q
    |||| ||||||||||||||||||||| | |||||||| |||||| |||||||||||||||||||| ||||        |||| || | |||||||||| |    
T  16501836 tttagttttcatttttaaattacggacattatgaaatgtttttttaaaagttaacatattaacataataaatgatcatataaaactttaatcacacttga 16501935  T
Q  257 tttattttag-aaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacac 355  Q
    |||||||||| ||||| ||| ||||||||||||||||||||||  |||| |||   |||    |||||||||| ||||| ||||||  ||||||||||||    
T  16501936 tttattttagaaaaaatatgatatatagtccgtaatttaaaaaataaaagtaatttctc----cccctctctttccctcctaaaccctcaatccaaacac 16502031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 164 - 356
Target Start/End: Original strand, 2550397 - 2550592
Alignment:
Q  164 gtttacttttcatttttaaattacggatactatgaaatattttttaaaa-agttaacatattaacatgataaa--------taacacctcaatcacactt 254  Q
    |||||||||||||||||||||||| || ||||||| || |||||| ||| | |||| ||| || |||||||||        ||| || |||||||||| |    
T  2550397 gtttacttttcatttttaaattacagacactatgatatgtttttttaaacaattaaaataata-catgataaacaatcatataatacttcaatcacacgt 2550495  T
Q  255 aatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaaca 354  Q
    |||||||| |||||||||||||||||||||||| |  ||||||| ||||| ||||||     |||||||| ||||||||| ||||||  |||||||||||    
T  2550496 aatttattatagaaaaacatgttatatagtccgaatcttaaaaaagaaaagtaaacc-----ctcccctcccttcccctcctaaaccctcaatccaaaca 2550590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 243 - 298
Target Start/End: Complemental strand, 22022962 - 22022907
Alignment:
Q  243 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaa 298  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22022962 tcaatcacacttaatttattttagaaaaatatgttatatagtccgtaatttaaaaa 22022907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 20513491 - 20513561
Alignment:
Q  165 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 235  Q
    ||||||||||||||||||| ||| || |||||||||| ||||||||||||||||||||||| |||||||||    
T  20513491 tttacttttcatttttaaactacagacactatgaaatgttttttaaaaagttaacatattatcatgataaa 20513561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 43607 - 43535
Alignment:
Q  164 gtttacttttcatttttaaa-ttacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 235  Q
    |||||||||||||||||||| ||||| | ||||||||||||||||| |||||||||||||||||||| |||||    
T  43607 gtttacttttcatttttaaaattacgaacactatgaaatattttttgaaaagttaacatattaacataataaa 43535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 245 - 315
Target Start/End: Complemental strand, 11756987 - 11756917
Alignment:
Q  245 aatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 315  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||  ||||| |||| ||||    
T  11756987 aatcacacttaatttattttagagaaacatgttatatagttcgtaatttaaaaaataaaaacaaactctcc 11756917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 165 - 280
Target Start/End: Original strand, 17024270 - 17024393
Alignment:
Q  165 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaa 256  Q
    ||||||||||||||||||||| | || | |||||||| || |||||||||||| ||||||||||||| ||        |||| || ||||||  ||||||    
T  17024270 tttacttttcatttttaaattgcagacattatgaaatgttctttaaaaagttatcatattaacatgaaaaacgatcatataatacttcaatcgtacttaa 17024369  T
Q  257 tttattttagaaaaacatgttata 280  Q
    ||||||||||||||||||||||||    
T  17024370 tttattttagaaaaacatgttata 17024393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 22023568 - 22023495
Alignment:
Q  164 gtttacttttcatttttaaattacggatact-atgaaatattttttaaaaa-gttaacatattaacatgataaa 235  Q
    ||||||||||||||| ||||||||||||| | ||||||| ||||||||||| ||||||||||||||||||||||    
T  22023568 gtttacttttcatttataaattacggatatttatgaaatgttttttaaaaaagttaacatattaacatgataaa 22023495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 32727822 - 32727893
Alignment:
Q  164 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 235  Q
    |||||| ||| ||||||||||||||| || ||||||||||||||||||||   |||||||||||||||||||    
T  32727822 gtttacattttatttttaaattacgggtattatgaaatattttttaaaaaacgaacatattaacatgataaa 32727893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 198 - 298
Target Start/End: Complemental strand, 42681618 - 42681510
Alignment:
Q  198 aaatattttttaaaaagttaacatattaacatgataaat--------aacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgta 289  Q
    |||||||||||||||| |||| ||| |||||||||||||        || || | ||||||||| || ||||||||||||||||||||||||||||||||    
T  42681618 aaatattttttaaaaaattaaaataataacatgataaatgatcatataatactttaatcacactaaaattattttagaaaaacatgttatatagtccgta 42681519  T
Q  290 atttaaaaa 298  Q
    ||| |||||    
T  42681518 attaaaaaa 42681510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 121 - 207
Target Start/End: Complemental strand, 14245288 - 14245202
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttt 207  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||||  ||||||||||||||||||||| ||| |||||| |||||    
T  14245288 ggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcatttttaaattacggacactgtgaaatgttttt 14245202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 310
Target Start/End: Original strand, 11419303 - 11419360
Alignment:
Q  253 ttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 310  Q
    ||||||||||||||||||||||||||||||  |||||||||||||| ||||| |||||    
T  11419303 ttaatttattttagaaaaacatgttatataacccgtaatttaaaaaagaaaagtaaac 11419360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 243 - 304
Target Start/End: Complemental strand, 14681581 - 14681520
Alignment:
Q  243 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaa 304  Q
    ||||||||| ||||||||||||| |||||||||||||||| || |||||||||||| |||||    
T  14681581 tcaatcacatttaatttattttaaaaaaacatgttatataatctgtaatttaaaaaagaaaa 14681520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 243 - 357
Target Start/End: Complemental strand, 40815408 - 40815300
Alignment:
Q  243 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacct 342  Q
    ||||||||||||  ||||||||| ||||||||||||||||||| |||||||||||| ||||| ||||   ||||||  | || ||||||||| |||| ||    
T  40815408 tcaatcacacttt-tttattttataaaaacatgttatatagtctgtaatttaaaaaagaaaagtaaa---tcctct--cttcccttcccctcctaaatct 40815315  T
Q  343 ccaatccaaacacac 357  Q
     ||||||||||||||    
T  40815314 tcaatccaaacacac 40815300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 122 - 196
Target Start/End: Complemental strand, 11757144 - 11757070
Alignment:
Q  122 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactat 196  Q
    |||||||||||||||  ||||| |||||||||||| ||||  |||||  |||||||||||||||||||| |||||    
T  11757144 gtgtgtttggatggagggtttaagaggggaagggaggggagggtttagatttcatttttaaattacggacactat 11757070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 243 - 309
Target Start/End: Original strand, 39966084 - 39966150
Alignment:
Q  243 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaa 309  Q
    ||||||||  ||||||||||| | ||||| |||||||||| |||||||||||||||| |||||||||    
T  39966084 tcaatcacgtttaatttatttaaaaaaaatatgttatataatccgtaatttaaaaataaaaaataaa 39966150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 13634713 - 13634782
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 190  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||||||||||| ||||||||| |||||    
T  13634713 ggtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaataacgga 13634782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 164 - 224
Target Start/End: Original strand, 17780279 - 17780340
Alignment:
Q  164 gtttacttttcatttttaaattacggatactatgaaat-attttttaaaaagttaacatatt 224  Q
    |||||||||||| |||||||||||||||| ||| ||||  ||||||||||||||||||||||    
T  17780279 gtttacttttcagttttaaattacggatattataaaatgtttttttaaaaagttaacatatt 17780340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 26414895 - 26414964
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 190  Q
    ||||||||||||| ||  |||||||||| ||||||| ||||  ||||||||||| |||||||||||||||    
T  26414895 ggtgtgtttggattgagggtttaggaggagaagggaggggagggtttacttttcgtttttaaattacgga 26414964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 4423404 - 4423336
Alignment:
Q  170 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaataa 238  Q
    ||||||||||||||||||| | | ||||||||||||||| |||| ||| ||||||||| | ||||||||    
T  4423404 ttttcatttttaaattacgaacattatgaaatatttttttaaaatttagcatattaacgtaataaataa 4423336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 119 - 207
Target Start/End: Original strand, 10650427 - 10650517
Alignment:
Q  119 atggtgtgtttggatggaaagtttaggaggggaa--gggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttt 207  Q
    |||||| |||||||||||   |||||||||||||  |||| ||||   ||||||||| |||||||||||||||| |||||||||| |||||    
T  10650427 atggtgcgtttggatggaggatttaggaggggaaaagggaggggaggatttactttttatttttaaattacggacactatgaaatgttttt 10650517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 121 - 188
Target Start/End: Original strand, 34980812 - 34980879
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacg 188  Q
    ||||||||||||| ||| |||||||||||||||||| || |  ||| |||||| ||||||||||||||    
T  34980812 ggtgtgtttggattgaaggtttaggaggggaagggagggaagggttcacttttaatttttaaattacg 34980879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 267 - 357
Target Start/End: Original strand, 1657969 - 1658054
Alignment:
Q  267 aaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 357  Q
    |||||||| |||||  |||||||||||||||||||||| |||||||||| |||||     |||||||| ||||||  | ||||||||||||    
T  1657969 aaaaacattttatagtgtccgtaatttaaaaatgaaaagtaaaccctcccctccc-----ttcccctcctaaaccctccatccaaacacac 1658054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 283 - 357
Target Start/End: Original strand, 14245218 - 14245287
Alignment:
Q  283 gtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 357  Q
    ||||||||||||||||||||||| |||||     |||||||| ||||||||| ||||||  ||||||||||||||    
T  14245218 gtccgtaatttaaaaatgaaaaacaaacc-----ctcccctcccttcccctcctaaaccctcaatccaaacacac 14245287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 229
Target Start/End: Original strand, 11419237 - 11419302
Alignment:
Q  164 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacat 229  Q
    |||||||||||||||| |||||| ||| | ||| |||| ||||| ||||||| |||||||||||||    
T  11419237 gtttacttttcattttcaaattaaggacaatataaaatgtttttaaaaaagtaaacatattaacat 11419302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 2556215 - 2556167
Alignment:
Q  164 gtttacttttcatttttaaattacggatactatgaaatattttttaaaa 212  Q
    ||||||||||||||||||||||| ||||  ||| |||||||||||||||    
T  2556215 gtttacttttcatttttaaattatggatgatataaaatattttttaaaa 2556167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 249 - 357
Target Start/End: Complemental strand, 34980916 - 34980813
Alignment:
Q  249 acacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatc 348  Q
    ||||||||||||||||| ||||| || |||  | || |||||||||||||| |||| | ||||     || ||||| ||||||||| ||||||| |||||    
T  34980916 acacttaatttattttaaaaaaatattttacgttgttcgtaatttaaaaattaaaagtgaacc-----cttccctcccttcccctcctaaaccttcaatc 34980822  T
Q  349 caaacacac 357  Q
    |||||||||    
T  34980821 caaacacac 34980813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 321
Target Start/End: Complemental strand, 43481 - 43410
Alignment:
Q  251 acttaatttattttagaaaaa-catgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctccc 321  Q
    ||||||||||||||| ||||| ||||||||||| ||| ||||||||||| || || |||| |||| ||||||    
T  43481 acttaatttattttaaaaaaaacatgttatataatccctaatttaaaaaagagaagtaaatcctcatctccc 43410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 182
Target Start/End: Complemental strand, 2550592 - 2550533
Alignment:
Q  123 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaa 182  Q
    ||||||||||| ||  |||||||||||||||||| ||||  ||||||||||| |||||||    
T  2550592 tgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaa 2550533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 319
Target Start/End: Original strand, 14684614 - 14684692
Alignment:
Q  243 tcaatcacacttaatttattt--tagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctc 319  Q
    |||||||||||||||||||||   | |||||||| |||||| | |||||||| ||||| ||||| ||| ||||||||||    
T  14684614 tcaatcacacttaatttatttaaaaaaaaaacattttatattgcccgtaattaaaaaaagaaaagtaagccctcctctc 14684692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 29002251 - 29002322
Alignment:
Q  164 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 235  Q
    ||||||||||||||||||||||| | | ||||| |||| ||||||  |||   |||||||||||||||||||    
T  29002251 gtttacttttcatttttaaattatgaacactataaaatgttttttttaaaaacaacatattaacatgataaa 29002322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 357
Target Start/End: Original strand, 8551621 - 8551659
Alignment:
Q  319 cccctctcttcccctcataaacctccaatccaaacacac 357  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  8551621 cccctctcttcccctcctaaaccttcaatccaaacacac 8551659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 183
Target Start/End: Original strand, 10476028 - 10476090
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaa 183  Q
    |||||||||| || ||  |||||||||||||||||||| ||  ||||||||||| ||||||||    
T  10476028 ggtgtgtttgaattgagggtttaggaggggaagggatgagagggtttacttttcttttttaaa 10476090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 359
Target Start/End: Original strand, 12600703 - 12600745
Alignment:
Q  317 ctcccctctcttcccctcataaacctccaatccaaacacactt 359  Q
    |||||||||||||||||| |||||||  |||||||||||||||    
T  12600703 ctcccctctcttcccctcctaaaccttaaatccaaacacactt 12600745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 186
Target Start/End: Original strand, 33744190 - 33744260
Alignment:
Q  116 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 186  Q
    |||| ||||||||||||||||  ||| ||| || ||||||| ||||  ||||||||||| |||||||||||    
T  33744190 tttagggtgtgtttggatggagggttaaggcggagaagggaggggagggtttacttttcttttttaaatta 33744260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 187
Target Start/End: Original strand, 40815299 - 40815365
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 187  Q
    ||||||||||||| |||  ||||||||||||||||| | ||   |||||||||| ||||||||||||    
T  40815299 ggtgtgtttggattgaagatttaggaggggaagggaagagaggatttacttttcttttttaaattac 40815365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 16938481 - 16938550
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 190  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||||  ||||| ||||||| |||||||    
T  16938481 ggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcttttttaagttacgga 16938550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 245 - 325
Target Start/End: Complemental strand, 13298376 - 13298296
Alignment:
Q  245 aatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctct 325  Q
    ||||||||||||||||| ||  |||||| | |||||| ||||| |||||||||| ||||| |||   |||| |||||||||    
T  13298376 aatcacacttaatttatattgcaaaaacgttttatattgtccgcaatttaaaaaagaaaagtaagttctcccctcccctct 13298296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 108; Significance: 4e-54; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 125 - 321
Target Start/End: Original strand, 31543078 - 31543282
Alignment:
Q  125 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatt 224  Q
    ||||||||||||  ||||| |||||||||||| ||||  ||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||    
T  31543078 tgtttggatggagggtttaagaggggaagggaggggagggtttacttttcatttttaaattacggaaactatgaaatgtttttaaaaaagttaacatatt 31543177  T
Q  225 aacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcct 316  Q
    ||||| ||||        |||| || ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||| ||||||||||     
T  31543178 aacatcataaacggtcatataatacttcaatcacacttaatttattttagaaaaacatgttatatggtccataatttaaaaaagaaaagtaaaccctccc 31543277  T
Q  317 ctccc 321  Q
    |||||    
T  31543278 ctccc 31543282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 127 - 326
Target Start/End: Original strand, 11575415 - 11575621
Alignment:
Q  127 tttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaa 226  Q
    ||||||||||   |||||||| |||||||| ||||  |||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  11575415 tttggatggaggatttaggagaggaaggga-gggagggtttacttttcattcttaaattaaggatactatgaaatgttttttaaaaagttaacatattaa 11575513  T
Q  227 catgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctct 318  Q
    ||||||||        |||| || | |||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||| |||||||||| ||    
T  11575514 catgataaacgatcatataatactttaatcacacttaatttattttagaaaaacatgttatataatttgtaatttaaaaatgaaaagtaaaccctcccct 11575613  T
Q  319 cccctctc 326  Q
    ||| ||||    
T  11575614 cccttctc 11575621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 122 - 315
Target Start/End: Complemental strand, 16653190 - 16652989
Alignment:
Q  122 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 221  Q
    ||||||||||||| |  ||||| |||||||||||| | ||  ||||| ||||||||||||||||||||| | |||||||| ||||| |||||||||||||    
T  16653190 gtgtgtttggatgaatggtttaagaggggaagggaggagagggtttaattttcatttttaaattacggacattatgaaatgtttttgaaaaagttaacat 16653091  T
Q  222 attaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccct 313  Q
    |||||||  |||||        ||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||    
T  16653090 attaacaaaataaacgatcatataatacttcaatcacacttgatttattttataaaaacatgttatatagtccgtaatttaaaaaagaaaagtaaaccct 16652991  T
Q  314 cc 315  Q
    ||    
T  16652990 cc 16652989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 121 - 320
Target Start/End: Complemental strand, 11785768 - 11785561
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    ||||||||||||||||  ||||||||||| ||| || ||||  ||||  ||||||||||||||||||||| | |||||||||||||||||||||||| ||    
T  11785768 ggtgtgtttggatggagggtttaggagggtaagagaagggagggtttgattttcatttttaaattacggacattatgaaatattttttaaaaagttagca 11785669  T
Q  221 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 312  Q
    ||||||||||||||        |||| || |||||| || ||||| |||||||||||||||||||||||||| | ||||||||||| ||||| ||||| |    
T  11785668 tattaacatgataaacaaacatataatacttcaatcgcaattaatgtattttagaaaaacatgttatatagttcataatttaaaaaagaaaagtaaactc 11785569  T
Q  313 tcctctcc 320  Q
    ||| ||||    
T  11785568 tcccctcc 11785561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 165 - 314
Target Start/End: Complemental strand, 1281341 - 1281184
Alignment:
Q  165 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaa 256  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||        |||| || |||| ||||||| |    
T  1281341 tttagttttcatttttaaattacggacactatgaaatattttttaaaaagttaacatattaacataataaacgataatataatacttcaaccacacttga 1281242  T
Q  257 tttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctc 314  Q
    ||||| ||||||||||||||||||| |||||||||||||||| ||||| |||||||||    
T  1281241 tttatcttagaaaaacatgttatatcgtccgtaatttaaaaaagaaaagtaaaccctc 1281184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 121 - 341
Target Start/End: Complemental strand, 31738665 - 31738442
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    ||||||||||||||||  |||||||||||||||  | ||||  |||||  |||||||||||||||||||| ||||| ||||||||||| || ||||||||    
T  31738665 ggtgtgtttggatggagggtttaggaggggaagaaaggggagggtttaaatttcatttttaaattacggacactataaaatattttttgaagagttaaca 31738566  T
Q  221 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 312  Q
    ||||||||||||||        |||| || ||||| |||||||||||||| |||| ||||||||||||||||| ||||||||||||  ||||| |||       
T  31738565 tattaacatgataaatgatcatataatacttcaattacacttaatttattctagagaaacatgttatatagtctgtaatttaaaaaaaaaaaaaaaa--- 31738469  T
Q  313 tcctctcccctctcttcccctcataaacc 341  Q
      ||||||| |||||||||||| ||||||    
T  31738468 --ctctcccttctcttcccctcctaaacc 31738442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 164 - 330
Target Start/End: Original strand, 1026894 - 1027067
Alignment:
Q  164 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 255  Q
    |||||||||||||||||||||| |||| ||||||||||||||| | |||||||||||||||||||||||||        |||| || ||||||| |||||    
T  1026894 gtttacttttcatttttaaattgcggacactatgaaatattttatcaaaagttaacatattaacatgataaacgatcatataatacttcaatcatactta 1026993  T
Q  256 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcc 330  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||| | |||||| | ||||| || |||||    
T  1026994 atttattttagaaaaacat-ttatatagtccgtaatttaaaaaagaaaagtgaacccttccctcccttcccttcc 1027067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 164 - 324
Target Start/End: Original strand, 7502999 - 7503167
Alignment:
Q  164 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacactta 255  Q
    |||| |||| ||||||||||||||  | |||||||||| |||| ||||||||||||||||||||||||||||        ||| || | |||||||||||    
T  7502999 gtttgctttccatttttaaattaccaaaactatgaaatgttttataaaaagttaacatattaacatgataaacaatcatataatactttaatcacactta 7503098  T
Q  256 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctc 324  Q
    ||||||||||||||||||||||||||| ||| ||||||||||| ||||| |||||||||| ||||||||    
T  7503099 atttattttagaaaaacatgttatataatccataatttaaaaacgaaaagtaaaccctcccctcccctc 7503167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 123 - 357
Target Start/End: Original strand, 30479721 - 30479958
Alignment:
Q  123 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacata 222  Q
    ||||||||||||||   ||||||||||| | ||| ||||  ||| |||||||||||||||||||| || |||||||||| | ||||||||||||||||||    
T  30479721 tgtgtttggatggaggatttaggagggggatggaggggagagttcacttttcatttttaaattacagacactatgaaatgtcttttaaaaagttaacata 30479820  T
Q  223 ttaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctc 314  Q
    ||||  ||||||        |||| || |||||||||||| ||||||||||||||||||||  |||||||| ||| |||||||| ||||| |||||||||    
T  30479821 ttaaggtgataaatgataatataatacttcaatcacacttgatttattttagaaaaacatgacatatagtctgtagtttaaaaaagaaaactaaaccctc 30479920  T
Q  315 ctctcccctctcttcccctcataaacctccaatccaaacacac 357  Q
    | ||||      |||| ||||||||||  ||||||||||||||    
T  30479921 cgctcc-----attcctctcataaaccctcaatccaaacacac 30479958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 115 - 310
Target Start/End: Original strand, 3726859 - 3727054
Alignment:
Q  115 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaag 214  Q
    ||||| ||||||||||||||||  ||||||||||||||||||  |||  ||||| ||||||||||||||||||||| || ||| ||| ||||||||| ||    
T  3726859 ttttagggtgtgtttggatggagggtttaggaggggaagggaaaggacggtttatttttcatttttaaattacggacaccatggaatgttttttaaatag 3726958  T
Q  215 ttaacatattaacatgataaataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 310  Q
    |||||||  |||   |  | |||| |  |||||||  |||||||||||||||||||||||||||||||||| ||||| |||||| ||||| |||||    
T  3726959 ttaacatgataaacggtcatataatatttcaatcatgcttaatttattttagaaaaacatgttatatagtctgtaatctaaaaaagaaaagtaaac 3727054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 164 - 318
Target Start/End: Original strand, 29358385 - 29358547
Alignment:
Q  164 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacactta 255  Q
    |||||||||| |||||||||||||||| ||||| |||||||||||||||| ||||||||||||||| |||||        ||| || |||||||||||||    
T  29358385 gtttactttttatttttaaattacggacactataaaatattttttaaaaa-ttaacatattaacattataaacgatcctataatacttcaatcacactta 29358483  T
Q  256 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaa-taaaccctcctct 318  Q
    ||||||| |||||||| |||||||||| |||||| ||||||||||||||| ||||| |||||||    
T  29358484 atttattctagaaaaatatgttatataatccgtagtttaaaaatgaaaaagtaaacactcctct 29358547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 158 - 309
Target Start/End: Complemental strand, 30664566 - 30664407
Alignment:
Q  158 gggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatca 249  Q
    ||||||||||| |||||| |||||||||||||| | ||  ||||||||||||||||||||||||||||| |||||||        |||| || |||||||    
T  30664566 gggaatgtttatttttcagttttaaattacggacattacaaaatattttttaaaaagttaacatattaatatgataaacggttatataatacttcaatca 30664467  T
Q  250 cacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaa 309  Q
    ||||||||||||||| ||||||||||||||| |||| | |||||||||| ||||||||||    
T  30664466 cacttaatttatttttgaaaaacatgttataaagtctgcaatttaaaaaagaaaaataaa 30664407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 163 - 321
Target Start/End: Complemental strand, 7979340 - 7979174
Alignment:
Q  163 tgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaataac--------acctcaatcacactt 254  Q
    |||||||||||||||||||||||||||| ||  |||||| ||| ||||||  ||||| ||||||||||||||||||         || |||||  |||||    
T  7979340 tgtttacttttcatttttaaattacggacaccgtgaaatgtttattaaaagtttaacttattaacatgataaataatcatataatacttcaattgcactt 7979241  T
Q  255 aatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctccc 321  Q
     ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||    
T  7979240 gatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaagtaaactctcctctccc 7979174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 121 - 229
Target Start/End: Complemental strand, 34634385 - 34634277
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    |||||||||||||||| ||||||||||||||||||||| ||  ||| | |||| |||||||||||||||| |||||||||||| ||||||||||||||||    
T  34634385 ggtgtgtttggatggagagtttaggaggggaagggatgtgagggttcattttttatttttaaattacggacactatgaaatatcttttaaaaagttaaca 34634286  T
Q  221 tattaacat 229  Q
    |||||||||    
T  34634285 tattaacat 34634277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 125 - 321
Target Start/End: Complemental strand, 36309081 - 36308876
Alignment:
Q  125 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatt 224  Q
    ||||||||||||  |||||||||||||||||| ||||  ||||||||||||| ||||||||||| | | | |||||||| |||| |||||| ||||||||    
T  36309081 tgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatctttaaattacgtacattgtgaaatatatttttaaaagtaaacatatt 36308982  T
Q  225 aacatgataa--------ataacacctcaatcacacttaatttatttta-gaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 315  Q
    ||||||||||        |||| || ||||||||||||| |||||||||  |||||||||||||||||||  || ||||| || ||||||| ||||||||    
T  36308981 aacatgataaacaatcatataatacttcaatcacacttagtttattttataaaaaacatgttatatagtctctagtttaacaaagaaaaatgaaccctcc 36308882  T
Q  316 tctccc 321  Q
     |||||    
T  36308881 cctccc 36308876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 170 - 298
Target Start/End: Complemental strand, 6315255 - 6315119
Alignment:
Q  170 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttat 261  Q
    |||||||||||||| |||||| |||||||||| ||||| ||||| ||||||||||||| |||||||        ||| || |||||||||||||||||||    
T  6315255 ttttcatttttaaaatacggacactatgaaatgtttttaaaaaaattaacatattaacttgataaacgatcgtataatacttcaatcacacttaatttat 6315156  T
Q  262 tttagaaaaacatgttatatagtccgtaatttaaaaa 298  Q
    ||||||||||||||||||||||||||||||| |||||    
T  6315155 tttagaaaaacatgttatatagtccgtaattaaaaaa 6315119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 164 - 313
Target Start/End: Original strand, 37923123 - 37923280
Alignment:
Q  164 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 255  Q
    ||||||||||||||||||||||| | | |||||||||| ||||||||| |||||| |||||||||||||||        |||| |  | |||| ||||||    
T  37923123 gtttacttttcatttttaaattatgaacactatgaaatgttttttaaagagttaaaatattaacatgataaatgatcatataatattttaatcgcactta 37923222  T
Q  256 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccct 313  Q
    |||||||||||||||||||||||||||||| ||||||||||||| || | ||||||||    
T  37923223 atttattttagaaaaacatgttatatagtctgtaatttaaaaataaatattaaaccct 37923280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 122 - 317
Target Start/End: Complemental strand, 11033659 - 11033455
Alignment:
Q  122 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatttttt-aaaaagttaaca 220  Q
    |||| ||| ||||||  |||||||||| ||||||| | |||  ||||||||||| |||||||||| | ||| |||||||| |||||| ||||| ||||||    
T  11033659 gtgtctttagatggagggtttaggaggagaagggaggagaagatttacttttcaattttaaattatgaatattatgaaatgtttttttaaaaaattaaca 11033560  T
Q  221 tattaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 312  Q
    |||||||||||||||        |||    |||||||||| |||||||||||||||||||||| |||||||||||| ||||||||| ||||| |||||||    
T  11033559 tattaacatgataaacgatcatataattattcaatcacacataatttattttagaaaaacatgatatatagtccgttatttaaaaaagaaaagtaaaccc 11033460  T
Q  313 tcctc 317  Q
     ||||    
T  11033459 ccctc 11033455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 170 - 357
Target Start/End: Original strand, 9718530 - 9718720
Alignment:
Q  170 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaatttat 261  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||||| ||||||||||||||||        |||| || ||||||||| |||||  ||    
T  9718530 ttttcatttttaaattacggacactatgaaatggtttttaaaaagttagcatattaacatgataaacaatcatataatacttcaatcacaattaatgaat 9718629  T
Q  262 tttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 357  Q
    |||||||||| |||||||||||| | ||||||||||| ||||| ||||     || ||||||| |||| |||| ||||||  ||||||||||||||    
T  9718630 tttagaaaaatatgttatatagttcataatttaaaaaagaaaagtaaa-----ctttcccctcccttctcctcctaaaccctcaatccaaacacac 9718720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 181 - 315
Target Start/End: Complemental strand, 37032561 - 37032419
Alignment:
Q  181 aaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaac 272  Q
    |||||||||| |||| ||| | |||||||||||||||||||||||| ||||||||        ||| || | ||||||||||||||||||||| ||||||    
T  37032561 aaattacggacactaggaagtgttttttaaaaagttaacatattaagatgataaactatcatataatactttaatcacacttaatttattttaaaaaaac 37032462  T
Q  273 atgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 315  Q
    ||||||||||||| |||||||||||| ||||||||||| ||||    
T  37032461 atgttatatagtctgtaatttaaaaaagaaaaataaactctcc 37032419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 149 - 357
Target Start/End: Complemental strand, 2248666 - 2248455
Alignment:
Q  149 ggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataaca 240  Q
    |||||||| ||||  ||| |||||| |||||||||||||||| ||||||||||||||||| |||||||||| |||||||||  |||        |||| |    
T  2248666 ggaagggaggggagggttcactttttatttttaaattacggacactatgaaatatttttttaaaagttaacttattaacatcgtaaacggtcatataata 2248567  T
Q  241 cctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaac 340  Q
       ||||||||||| |||||||||||||||||||||||||||  |||||||||||||| | ||| | ||     |||||||||| ||||||||| |||||    
T  2248566 ttccaatcacacttgatttattttagaaaaacatgttatataaaccgtaatttaaaaaaggaaattgaa-----ctctcccctcccttcccctcctaaac 2248472  T
Q  341 ctccaatccaaacacac 357  Q
       ||||||||||||||    
T  2248471 tctcaatccaaacacac 2248455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 121 - 314
Target Start/End: Original strand, 41103506 - 41103709
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaa--ttacggatactatgaaatattttttaaaaagttaa 218  Q
    ||||||||||||||||  ||||||||||||||| || ||||  ||||  ||||| ||||||||  ||| ||| |||||||||  ||||| ||||| ||||    
T  41103506 ggtgtgtttggatggagggtttaggaggggaagagaggggagggtttgattttcgtttttaaaaattatggacactatgaaacgtttttaaaaaaattaa 41103605  T
Q  219 catattaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 310  Q
     | | ||||||||||||        ||| || |||||||||||||||||||||||||||||||||||||||||   |||||||||||| ||||| |||||    
T  41103606 aacaataacatgataaacgatcatataatacttcaatcacacttaatttattttagaaaaacatgttatatagcttgtaatttaaaaaagaaaagtaaac 41103705  T
Q  311 cctc 314  Q
    ||||    
T  41103706 cctc 41103709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 171 - 305
Target Start/End: Complemental strand, 28083934 - 28083792
Alignment:
Q  171 tttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttatt 262  Q
    |||| ||||||||||||||||||||||| || ||||||||| ||||||||| | |||||||||||        ||| ||  |||||||||||||||||||    
T  28083934 tttcttttttaaattacggatactatgatatgttttttaaagagttaacatgtcaacatgataaacaatcatataatactccaatcacacttaatttatt 28083835  T
Q  263 ttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaa 305  Q
    ||||| ||||||||||||| ||| |||||||||||| ||||||    
T  28083834 ttagagaaacatgttatattgtctgtaatttaaaaaagaaaaa 28083792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 29690925 - 29691038
Alignment:
Q  122 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 221  Q
    ||||||||||||| |||||||||||||  ||| || | ||  ||||||||||||||| |||  ||| ||||||| ||||||||||| |||||||||||||    
T  29690925 gtgtgtttggatgaaaagtttaggaggaaaagagacgagagagtttacttttcatttataacatactgatactaggaaatatttttaaaaaagttaacat 29691024  T
Q  222 attaacatgataaa 235  Q
    ||||||||||||||    
T  29691025 attaacatgataaa 29691038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 121 - 310
Target Start/End: Original strand, 40990183 - 40990383
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatt-acggatactatgaaatatttttt--aaaaagtta 217  Q
    ||||||||||||||||  |||| ||||  ||| ||| ||||  |||||  |||||||||| |||| |  || |||||||||| ||||||  ||| |||||    
T  40990183 ggtgtgtttggatggagggtttgggagaagaaaggaggggagggtttatatttcattttttaatttatagacactatgaaatgttttttttaaagagtta 40990282  T
Q  218 acatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaa 309  Q
    |||||||||||||||||        |||| || ||||||| ||||||||||||||| | |||||||||||||||||||||||||||||| |||||| |||    
T  40990283 acatattaacatgataagcgatcatataatacttcaatcagacttaatttattttaaagaaacatgttatatagtccgtaatttaaaaaagaaaaacaaa 40990382  T
Q  310 c 310  Q
    |    
T  40990383 c 40990383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 243 - 315
Target Start/End: Original strand, 42650468 - 42650540
Alignment:
Q  243 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 315  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||| ||||    
T  42650468 tcaatcacacttaatttattttagaaaaacatgttatatattccgtaatttaaaaacgaaaagtaaactctcc 42650540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 164 - 357
Target Start/End: Original strand, 4247563 - 4247761
Alignment:
Q  164 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 255  Q
    |||||||||| |||||||||||||||  ||| | ||||||||||||| |||||||||||||| ||||||||        |||| || | ||||| |||||    
T  4247563 gtttactttttatttttaaattacggc-actttaaaatattttttaagaagttaacatattagcatgataaacgatcatataatacttaaatcatactta 4247661  T
Q  256 atttattttagaaaaacatgttatatagtccgtaattt-aaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaaca 354  Q
    |||||||||| |||||||| |   ||| | | |||||| ||||| ||||| |||||||||||||  |||| ||||||||| ||||||| |||||||||||    
T  4247662 atttattttaaaaaaacatat--aataattcataatttaaaaaaagaaaagtaaaccctcctct-acctcccttcccctcctaaaccttcaatccaaaca 4247758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 121 - 190
Target Start/End: Complemental strand, 43732929 - 43732860
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 190  Q
    ||||||||||||||||  |||||||||||||||||| ||||  ||||||||||| |||||||||||||||    
T  43732929 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtttacttttcttttttaaattacgga 43732860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 10028347 - 10028259
Alignment:
Q  139 gtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatt-ttttaaaaagttaacatattaa 226  Q
    ||||||||| ||||| || ||||  |||||||||| | |||||||||||||| ||||||||||||| |||| |||||||||||||||||    
T  10028347 gtttaggagaggaagtgaggggagggtttactttttacttttaaattacggacactatgaaatattttttttaaaagttaacatattaa 10028259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 203 - 315
Target Start/End: Complemental strand, 33922680 - 33922560
Alignment:
Q  203 ttttttaaaaagttaacatattaacatgataaataac--------acctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaattta 294  Q
    ||||||||||||||||||||||| ||||||||| ||         || ||||||| ||| ||||||||||| ||||| ||||||||||||||| ||||||    
T  33922680 ttttttaaaaagttaacatattatcatgataaacaatcatatcatacttcaatcatactaaatttattttaaaaaaatatgttatatagtccggaattta 33922581  T
Q  295 aaaatgaaaaataaaccctcc 315  Q
    |||| ||||| ||||| ||||    
T  33922580 aaaaagaaaagtaaactctcc 33922560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 243 - 309
Target Start/End: Complemental strand, 10028222 - 10028156
Alignment:
Q  243 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaa 309  Q
    |||| |||||||||||||||||| ||||| ||||||||| |||||||||||||||| ||||| ||||    
T  10028222 tcaaccacacttaatttattttaaaaaaatatgttatatggtccgtaatttaaaaaagaaaagtaaa 10028156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 165 - 304
Target Start/End: Complemental strand, 13405178 - 13405027
Alignment:
Q  165 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagt----taacatattaacatgataaa--------taacacctcaatcacac 252  Q
    |||||||||||||||||||||||||| | ||  ||||||||||| ||||||    |||| |||||||||||||||        ||| |  ||||| | |     
T  13405178 tttacttttcatttttaaattacggacattaaaaaatatttttttaaaagtgaattaacgtattaacatgataaacgatcatataataattcaattatat 13405079  T
Q  253 ttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaa 304  Q
     |||||||||||||||||||||||||||||||| || ||||||||| |||||    
T  13405078 ataatttattttagaaaaacatgttatatagtctgttatttaaaaaagaaaa 13405027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 112 - 186
Target Start/End: Complemental strand, 9718730 - 9718656
Alignment:
Q  112 ttgttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 186  Q
    |||||| | ||||||||||||| ||  |||||||||| ||||||| ||||| ||||||||||| |||||||||||    
T  9718730 ttgtttcagggtgtgtttggattgagggtttaggaggagaagggaggggaaagtttacttttcttttttaaatta 9718656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 125 - 190
Target Start/End: Original strand, 1281149 - 1281214
Alignment:
Q  125 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 190  Q
    ||||||||| ||  |||||||||||||||||||| ||  ||||||||||| |||||||||||||||    
T  1281149 tgtttggattgagggtttaggaggggaagggatgagagggtttacttttcttttttaaattacgga 1281214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 16024394 - 16024327
Alignment:
Q  122 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 190  Q
    |||||||||||||||   ||||||||||||||||| ||||  ||||||||||| |||||||||||||||    
T  16024394 gtgtgtttggatggaggatttaggaggggaagggaggggagagtttacttttc-tttttaaattacgga 16024327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 31543319 - 31543249
Alignment:
Q  116 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 186  Q
    |||| ||||||||| ||| ||  |||||||||||||||||| ||||  ||||||||||| |||||||||||    
T  31543319 tttagggtgtgtttcgattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaatta 31543249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 226
Target Start/End: Original strand, 35694828 - 35694862
Alignment:
Q  192 actatgaaatattttttaaaaagttaacatattaa 226  Q
    |||||||||||||||||||||||||||||||||||    
T  35694828 actatgaaatattttttaaaaagttaacatattaa 35694862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 249 - 298
Target Start/End: Original strand, 12022281 - 12022330
Alignment:
Q  249 acacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaa 298  Q
    ||||||||||||||||| |||||||| ||| || ||||||||||||||||    
T  12022281 acacttaatttattttaaaaaaacattttacattgtccgtaatttaaaaa 12022330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 2248454 - 2248522
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgg 189  Q
    ||||||||||||| || ||||||||||||||||||| ||||  ||| | ||| | ||||||||||||||    
T  2248454 ggtgtgtttggattgagagtttaggaggggaagggaggggagagttcaatttccttttttaaattacgg 2248522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 188
Target Start/End: Complemental strand, 8815383 - 8815316
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacg 188  Q
    ||||||||||||| ||  |||||||||||| ||||| ||||  ||| |||||| ||||||||||||||    
T  8815383 ggtgtgtttggattgagggtttaggagggggagggaggggagggttcacttttaatttttaaattacg 8815316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 236
Target Start/End: Original strand, 24243052 - 24243164
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    |||||||||||||||| |||||| || ||||||||| ||||    |||||||||||||| ||||||| || ||||| |||| | ||||||||| || | |    
T  24243052 ggtgtgtttggatggagagtttaaga-gggaagggaagggatgacttacttttcattttgaaattac-gacactataaaatgtcttttaaaaa-ttgaaa 24243148  T
Q  221 tattaacatgataaat 236  Q
    || |||||||||||||    
T  24243149 taataacatgataaat 24243164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 283 - 321
Target Start/End: Complemental strand, 3726935 - 3726897
Alignment:
Q  283 gtccgtaatttaaaaatgaaaaataaaccctcctctccc 321  Q
    ||||||||||||||||||||||||||||| |||| ||||    
T  3726935 gtccgtaatttaaaaatgaaaaataaaccgtcctttccc 3726897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 5562012 - 5562058
Alignment:
Q  166 ttacttttcatttttaaattacggatactatgaaatattttttaaaa 212  Q
    ||||||||||||||||||||||| ||| ||| || ||||||||||||    
T  5562012 ttacttttcatttttaaattacgtataatataaattattttttaaaa 5562058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 7394701 - 7394636
Alignment:
Q  123 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacg 188  Q
    ||||||||||| ||  |||||||||||||||||| ||||  ||| ||||||  |||||||||||||    
T  7394701 tgtgtttggattgagggtttaggaggggaagggaggggatggttcacttttattttttaaattacg 7394636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 208
Target Start/End: Original strand, 30365126 - 30365219
Alignment:
Q  115 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatttttt 208  Q
    ||||| ||||||||||||| ||  |||||||||| ||| ||| ||||  ||| |||||| |||||||||||||| | |  || |||||||||||    
T  30365126 ttttagggtgtgtttggattgagggtttaggaggagaaaggaggggagagttcacttttaatttttaaattacgaacaacataaaatatttttt 30365219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 321
Target Start/End: Complemental strand, 31543143 - 31543106
Alignment:
Q  284 tccgtaatttaaaaatgaaaaataaaccctcctctccc 321  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  31543143 tccgtaatttaaaaatgaaaagtaaaccctcccctccc 31543106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 304
Target Start/End: Original strand, 38198181 - 38198241
Alignment:
Q  243 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaa 304  Q
    |||||||||||||||| |||||| |||||||  |||||  ||| ||||||||||||||||||    
T  38198181 tcaatcacacttaattcatttta-aaaaacactttatagtgtctgtaatttaaaaatgaaaa 38198241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 212
Target Start/End: Complemental strand, 42919912 - 42919879
Alignment:
Q  179 ttaaattacggatactatgaaatattttttaaaa 212  Q
    |||||||||||||||||| |||||||||||||||    
T  42919912 ttaaattacggatactataaaatattttttaaaa 42919879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 191
Target Start/End: Complemental strand, 7503202 - 7503126
Alignment:
Q  115 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggat 191  Q
    ||||| ||||||||||||| ||   ||| |||||||| |||| ||||  ||||||||||| ||||||||||| ||||    
T  7503202 ttttagggtgtgtttggattgaggctttgggaggggaggggaggggagggtttacttttcgtttttaaattatggat 7503126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 11575646 - 11575582
Alignment:
Q  123 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 187  Q
    |||||||||||  |  |||||||| | ||||||| ||||  ||||||||||||||||||||||||    
T  11575646 tgtgtttggattcagggtttaggatgagaagggaggggagggtttacttttcatttttaaattac 11575582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 108; Significance: 4e-54; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 121 - 321
Target Start/End: Original strand, 41496959 - 41497167
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    ||||||||||||||||  |||||||||||||||||| ||||   ||||||||| |||||||||||||||| | || ||||| ||||||||||| ||||||    
T  41496959 ggtgtgtttggatggagggtttaggaggggaagggaggggatgatttactttttatttttaaattacggacaataggaaatgttttttaaaaatttaaca 41497058  T
Q  221 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 312  Q
    ||||||||||||||        ||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  41497059 tattaacatgataaatgatcatataattcttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaagtaaaccc 41497158  T
Q  313 tcctctccc 321  Q
    ||| |||||    
T  41497159 tcccctccc 41497167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 164 - 358
Target Start/End: Original strand, 33655153 - 33655350
Alignment:
Q  164 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 255  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||        |||| || |||||||||||||    
T  33655153 gtttacttttcatttttaaattacggacactatgaaatgttttttaaaaagttaacatattaacatgataaatgatcatataatacttcaatcacactta 33655252  T
Q  256 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacac 355  Q
    |||||||||||||||||||||||||||| || ||||||||||| ||||| ||||||     ||| |||||||||||||| ||||||  ||||||||||||    
T  33655253 atttattttagaaaaacatgttatatagcccataatttaaaaaagaaaagtaaacc-----ctcgcctctcttcccctcctaaaccctcaatccaaacac 33655347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 140 - 310
Target Start/End: Original strand, 24970187 - 24970364
Alignment:
Q  140 tttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa----- 234  Q
    ||||||||||||||| | ||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||         
T  24970187 tttaggaggggaagg-aggggatgatttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacttgataaacgat 24970285  T
Q  235 ---ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 310  Q
       |||| || |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||| ||||    
T  24970286 catataatacttcaatcacacttaatttattttagaaaaacatgttatataatccataatttaaaaaagaaaaacaaac 24970364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 121 - 321
Target Start/End: Complemental strand, 47391098 - 47390889
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    ||||||||||||||||  ||||| |||||||||||| ||||  ||||  ||||||||||||||||||||| ||||| ||| ||||||||||| |||||||    
T  47391098 ggtgtgtttggatggagggtttaagaggggaagggaggggagagtttggttttcatttttaaattacggacactataaaacattttttaaaatgttaaca 47390999  T
Q  221 tattaacatgataa---------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaacc 311  Q
    ||||||||||||||         |||| || ||||||||| ||||| |||||||||||||||||||||||||| | ||||||||||| ||||| ||||||    
T  47390998 tattaacatgataaacaagtcatataatacttcaatcacaattaatgtattttagaaaaacatgttatatagttcataatttaaaaaagaaaagtaaacc 47390899  T
Q  312 ctcctctccc 321  Q
    |||| |||||    
T  47390898 ctccactccc 47390889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 121 - 311
Target Start/End: Original strand, 40196534 - 40196732
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    ||||||||||||||||  |||| |||||||||||||  |||  ||||||||||||||||| ||||||||| ||||| |||| |||| |||||||||||||    
T  40196534 ggtgtgtttggatggagggtttgggaggggaagggagaggagggtttacttttcatttttgaattacggacactataaaatgttttataaaaagttaaca 40196633  T
Q  221 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaacc 311  Q
    ||| ||| ||||||        |||| || |||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||| ||||||    
T  40196634 tatcaacctgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacatgttatatattccgtaatttaaaaacaaaaagtaaacc 40196732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 165 - 320
Target Start/End: Original strand, 34235053 - 34235219
Alignment:
Q  165 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaa 256  Q
    |||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||| |||||||        |||| || ||||||||||||||    
T  34235053 tttacttttcatttttaaattacggacactatgaaatgttttataaaaagttaacatattaatatgataaacaatcatataatacttcaatcacacttaa 34235152  T
Q  257 tttattttag-aaaaacatgttatatagtccgtaatttaaaaatgaaaaataa--accctcctctcc 320  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||| |||  ||||||||||||    
T  34235153 tttattttagaaaaaacatgttatataatccgtaatttaaaaatgaaaagtaaacaccctcctctcc 34235219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 122 - 313
Target Start/End: Complemental strand, 42306571 - 42306376
Alignment:
Q  122 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 221  Q
    |||||||||||| ||  ||||||||||||||  || ||||  ||||| ||||||||||||||||||||| |||||||||| ||||||||||||||| |||    
T  42306571 gtgtgtttggattgagggtttaggaggggaattgaggggatggtttaattttcatttttaaattacggacactatgaaatgttttttaaaaagttagcat 42306472  T
Q  222 attaacatgataa----ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccct 313  Q
    |||||| | ||||    |||| ||  ||||||| |||||||||||||||||| ||||||||||||||| |||||||||||| |||||  |||||||    
T  42306471 attaacctcataaacatataatactccaatcacgcttaatttattttagaaatacatgttatatagtcggtaatttaaaaaagaaaatcaaaccct 42306376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 116 - 357
Target Start/End: Original strand, 13770945 - 13771187
Alignment:
Q  116 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 215  Q
    |||| ||||||||||||| ||   ||||||||||||||||| ||||   ||||||| | |||||||||||||||| ||||| ||||||| |  |||||||    
T  13770945 tttagggtgtgtttggattgaggatttaggaggggaagggaggggaggatttacttattatttttaaattacggacactataaaatattat--aaaaagt 13771042  T
Q  216 taacatattaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaata 307  Q
    ||||||||||||||||||||        ||||||   ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||    
T  13771043 taacatattaacatgataaacaatgatataacactcgaatcacacttaatttattttaaaaaaacatgttatatagtccgtaatttaaaaacgaaaagta 13771142  T
Q  308 aaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 357  Q
    ||     ||||| |||| ||||||||| ||||||  ||||| ||||||||    
T  13771143 aa-----ctctcacctcccttcccctcctaaaccctcaatctaaacacac 13771187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 139 - 357
Target Start/End: Complemental strand, 25887417 - 25887195
Alignment:
Q  139 gtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatttttta-aaaagttaacatattaacatgataaa-- 235  Q
    |||||||||||||||||| ||||  |||||| |||||||||||||||||| | |  ||||||| ||||||  ||||||||||||||||| ||||||||      
T  25887417 gtttaggaggggaagggaggggagagtttacatttcatttttaaattacgaaaatcatgaaatgttttttttaaaagttaacatattaatatgataaaca 25887318  T
Q  236 ------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttc 329  Q
          ||| ||  ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||| ||| |     |||||||| ||||    
T  25887317 atcatataatactccaatcacacttaatttattttagaaaaacatgttatatagtccgtgatttataaaagaaaaacaaatc-----ctcccctcccttc 25887223  T
Q  330 ccctcataaacctccaatccaaacacac 357  Q
    ||||||||||||  ||||||||||||||    
T  25887222 ccctcataaaccctcaatccaaacacac 25887195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 139 - 357
Target Start/End: Original strand, 1051520 - 1051739
Alignment:
Q  139 gtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--- 235  Q
    ||||||||||||||  || ||||  ||| || |||||||||||||||||||| || ||||||| ||||||||||||||||||||||| |||||||||       
T  1051520 gtttaggaggggaatagaggggagggttaacatttcatttttaaattacggacac-atgaaatgttttttaaaaagttaacatatta-catgataaacaa 1051617  T
Q  236 -----taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcc 330  Q
         |||  | ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||   ||||||  |||| |||||    
T  1051618 tcatataatgcttcaatcacacttaatttattttagaaaaacaggttatatagttcgtaatttaaaaaagaaaaataaa---tcctct--cctcccttcc 1051712  T
Q  331 cctcataaacctccaatccaaacacac 357  Q
    |||| ||||||  ||||||||||||||    
T  1051713 cctcctaaaccctcaatccaaacacac 1051739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 122 - 315
Target Start/End: Complemental strand, 43230476 - 43230276
Alignment:
Q  122 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 221  Q
    ||||||||||||| |  ||||| ||| |||| | | ||||  |||||||||| |||||||||||||||| ||| |||| | |||||| ||||||||||||    
T  43230476 gtgtgtttggatgtagggtttatgagaggaaagaaggggagagtttactttttatttttaaattacggacact-tgaattttttttttaaaagttaacat 43230378  T
Q  222 attaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccct 313  Q
    ||||||||||||||        |||  | |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||    
T  43230377 attaacatgataaacgatcgtataattcttcaatcgcacttaatttattttagaaaaacatgttatataatccgtaatttaaaaaagaaaagtaaaccct 43230278  T
Q  314 cc 315  Q
    ||    
T  43230277 cc 43230276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 121 - 235
Target Start/End: Complemental strand, 18231828 - 18231714
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    ||||||||||||||||  |||||||||||||||||| ||||   |||||||||||||||||||||||  | |||||||||| ||||||||||||||||||    
T  18231828 ggtgtgtttggatggagcgtttaggaggggaagggaggggaggatttacttttcatttttaaattacaaacactatgaaatgttttttaaaaagttaaca 18231729  T
Q  221 tattaacatgataaa 235  Q
    |||||||||||||||    
T  18231728 tattaacatgataaa 18231714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 125 - 235
Target Start/End: Original strand, 4833537 - 4833647
Alignment:
Q  125 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatt 224  Q
    ||||||||||||  |||||||||||||||||| ||||  |||||||||||||||||||||||| || |||||||||| |||| |||||||||||| ||||    
T  4833537 tgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatttttaaattacagacactatgaaatgttttataaaaagttaacctatt 4833636  T
Q  225 aacatgataaa 235  Q
    |||||||||||    
T  4833637 aacatgataaa 4833647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 116 - 354
Target Start/End: Complemental strand, 41008425 - 41008188
Alignment:
Q  116 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttt--taaaaa 213  Q
    |||| |||||||||||||| |  |||||||||||||||| |   ||  |||||| ||||||||||||||||||||||||||||  | ||| |  | ||||    
T  41008425 tttagggtgtgtttggatgcagggtttaggaggggaaggaa---ga--gtttacatttcatttttaaattacggatactatgatttttttgtcttcaaaa 41008331  T
Q  214 gttaacatattaacatgataaataac------acctcaatcacacttaatttattttagaaaaa-catgttatatagtccgtaatttaaaaatgaaaaat 306  Q
    |||||||||||||||||||||| ||       || ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||     
T  41008330 gttaacatattaacatgataaacaatcatataacttcaatcacacttaatttattttaaaaaaaacatgttatatagtccgtaatttaaaaaagaaaaac 41008231  T
Q  307 aaaccctcctctcccctctcttcccctcataaacctccaatccaaaca 354  Q
    |||      ||||||||| |||||||||  |||||  |||||||||||    
T  41008230 aaa-----ttctcccctcccttcccctctcaaaccctcaatccaaaca 41008188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 121 - 290
Target Start/End: Original strand, 45940658 - 45940835
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    ||||||||||||||||| |||||| ||||||||||| || || |||||||||| ||||||| |||||||| |||||||||| ||||||| |||| ||  |    
T  45940658 ggtgtgtttggatggaaggtttagaaggggaagggagggcaaagtttactttttatttttatattacggacactatgaaatgttttttacaaagatagta 45940757  T
Q  221 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaa 290  Q
    ||||||||| ||||        |||| || ||||| ||| ||||||||||||||||||| ||||||||||||| ||||    
T  45940758 tattaacataataagcgataatataatacttcaattacatttaatttattttagaaaaatatgttatatagtctgtaa 45940835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 247 - 357
Target Start/End: Original strand, 39856001 - 39856106
Alignment:
Q  247 tcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaa 346  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||     |||||||| ||||||||| ||||||  |||    
T  39856001 tcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaagtaaacc-----ctcccctcccttcccctcctaaaccctcaa 39856095  T
Q  347 tccaaacacac 357  Q
    |||||||||||    
T  39856096 tccaaacacac 39856106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 166 - 320
Target Start/End: Complemental strand, 17853067 - 17852906
Alignment:
Q  166 ttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaat 257  Q
    |||||||||||||||||||||||   ||||||||| | ||||||||||| ||| |||  |||||||||||        ||| ||||||||||||||||||    
T  17853067 ttacttttcatttttaaattacgagcactatgaaa-agtttttaaaaagataaaataacaacatgataaacgatcatataatacctcaatcacacttaat 17852969  T
Q  258 ttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcc 320  Q
    |||||||||||||||||||||| || ||||||||||||||| ||||| ||| |||||| ||||    
T  17852968 ttattttagaaaaacatgttatttaatccgtaatttaaaaaagaaaagtaatccctcccctcc 17852906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 165 - 326
Target Start/End: Original strand, 34228364 - 34228534
Alignment:
Q  165 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaa 256  Q
    |||||||| ||||||  ||||||||| ||||||||   ||| | |||||||||||||||||| |||||||        |||| || ||||||||||||||    
T  34228364 tttactttacattttgtaattacggacactatgaatgttttataaaaaagttaacatattaatatgataagcaatcatataatacttcaatcacacttaa 34228463  T
Q  257 tttattttagaaaaacatgttatatag-tccgtaatttaaaaatgaaaaataaaccctcctctcccctctc 326  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||| |||| ||||| ||||| ||||    
T  34228464 tttattttagaaaaacatgttatatagttccgtaattttaaaatgaaaagtaaatcctcccctcccttctc 34228534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 171 - 298
Target Start/End: Original strand, 40572287 - 40572421
Alignment:
Q  171 tttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaatttatt 262  Q
    ||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||        |||| || | |||||| |||||||||||    
T  40572287 tttcatttttaaattacggatgctataaaatatttttt-aaaagttaacatattaacatgataaaaggtcatataatactttaatcacgcttaatttatt 40572385  T
Q  263 ttagaaaaacatgttatatagtccgtaatttaaaaa 298  Q
    ||||| |||||| |||||||||||||||||| ||||    
T  40572386 ttagagaaacatattatatagtccgtaattttaaaa 40572421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 124 - 235
Target Start/End: Complemental strand, 10315872 - 10315761
Alignment:
Q  124 gtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatat 223  Q
    |||||||||||||| ||||||||||||||||||  ||    |||| |||||||||||||| |||||| |||||||||| ||||||||||| |||||||||    
T  10315872 gtgtttggatggaaggtttaggaggggaagggagagggtgatttatttttcatttttaaaatacggacactatgaaatgttttttaaaaatttaacatat 10315773  T
Q  224 taacatgataaa 235  Q
    ||||| ||||||    
T  10315772 taacaagataaa 10315761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 192 - 320
Target Start/End: Original strand, 37417706 - 37417842
Alignment:
Q  192 actatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatag 283  Q
    |||||||||| |||| ||||||||||||||||| ||||||||||        ||| || |||||||||||||| ||| ||| ||||||||||||||||||    
T  37417706 actatgaaatgttttctaaaaagttaacatattcacatgataaacgatcatataatacttcaatcacacttaacttaattttgaaaaacatgttatatag 37417805  T
Q  284 tccgtaatttaaaaatgaaaaataaaccctcctctcc 320  Q
    ||||| ||||||||||||||| |||||| ||| ||||    
T  37417806 tccgttatttaaaaatgaaaagtaaaccatcccctcc 37417842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 32872826 - 32872897
Alignment:
Q  164 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 235  Q
    ||||||||||| ||||||||||||| ||| ||| ||||| ||||||||||||||||||||||||||||||||    
T  32872826 gtttacttttcttttttaaattacgaatattataaaatactttttaaaaagttaacatattaacatgataaa 32872897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 121 - 235
Target Start/End: Original strand, 13425122 - 13425236
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    ||||||||||||| ||  |||||||||||||||| |  |||  ||||| |||| ||||||||||||| || ||||  ||||||||||| |||||| ||||    
T  13425122 ggtgtgtttggatagagggtttaggaggggaaggaagaggatggtttattttttatttttaaattacagacactacaaaatattttttcaaaagtcaaca 13425221  T
Q  221 tattaacatgataaa 235  Q
    |||||||||||||||    
T  13425222 tattaacatgataaa 13425236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 176 - 274
Target Start/End: Original strand, 22163167 - 22163272
Alignment:
Q  176 tttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaatttattttaga 267  Q
    ||||||||||||||| |||||||||| ||||||| |||| |||||||||||||||||||        |||| || |||||||||||||||||||||||||    
T  22163167 tttttaaattacggacactatgaaatgttttttagaaag-taacatattaacatgataaacgatcatataatacttcaatcacacttaatttattttaga 22163265  T
Q  268 aaaacat 274  Q
    |||||||    
T  22163266 aaaacat 22163272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 176 - 274
Target Start/End: Original strand, 22221875 - 22221980
Alignment:
Q  176 tttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaatttattttaga 267  Q
    ||||||||||||||| |||||||||| ||||||| |||| |||||||||||||||||||        |||| || |||||||||||||||||||||||||    
T  22221875 tttttaaattacggacactatgaaatgttttttagaaag-taacatattaacatgataaacgatcatataatacttcaatcacacttaatttattttaga 22221973  T
Q  268 aaaacat 274  Q
    |||||||    
T  22221974 aaaacat 22221980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 122 - 358
Target Start/End: Complemental strand, 26366009 - 26365769
Alignment:
Q  122 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 221  Q
    ||||||||||| |||  ||||| || |||||| || ||||  ||||  ||||| ||||||||||| ||||||||  |||||||||||  ||| |||| ||    
T  26366009 gtgtgtttggacggagggtttaagatgggaagagaggggatagtttgattttcgtttttaaattatggatactacaaaatattttttttaaaattaaaat 26365910  T
Q  222 attaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccct 313  Q
    | |||||||| |||        ||| || |||||||||| || ||||||||||||||| ||||||||||||  ||||| |||||| ||||| ||||| ||    
T  26365909 aataacatgagaaacaatcatataatacttcaatcacacctagtttattttagaaaaatatgttatatagtttgtaatataaaaaagaaaagtaaactct 26365810  T
Q  314 cctctcccctctcttcccctcataaacctccaatccaaacacact 358  Q
    |  ||||| ||    |||||| ||||||  |||||||||||||||    
T  26365809 caactcccttc----cccctcctaaaccctcaatccaaacacact 26365769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 243 - 357
Target Start/End: Original strand, 31571600 - 31571711
Alignment:
Q  243 tcaatcacacttaat-ttattttagaaaaa-catgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaac 340  Q
    ||||||||||||||| || ||||| ||||| |||||||||| |||||||||||||||| ||||| ||||     |||||||||| ||||||||| |||||    
T  31571600 tcaatcacacttaatatttttttaaaaaaagcatgttatatggtccgtaatttaaaaaagaaaagtaaa-----ctctcccctcgcttcccctcctaaac 31571694  T
Q  341 ctccaatccaaacacac 357  Q
    |  ||||||||||||||    
T  31571695 cctcaatccaaacacac 31571711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 121 - 207
Target Start/End: Original strand, 48881560 - 48881646
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttt 207  Q
    ||||||||||||||||  |||||||||||||||||| ||||  | ||||||||| ||||||||||||||| | ||| ||||| ||||    
T  48881560 ggtgtgtttggatggagggtttaggaggggaagggaggggatggcttacttttcttttttaaattacggacattataaaataatttt 48881646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 257 - 314
Target Start/End: Original strand, 23029480 - 23029537
Alignment:
Q  257 tttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctc 314  Q
    |||||||||||||||||||||||||||||  ||||||||||| ||||| |||||||||    
T  23029480 tttattttagaaaaacatgttatatagtctataatttaaaaaagaaaagtaaaccctc 23029537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 121 - 190
Target Start/End: Complemental strand, 39856107 - 39856038
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 190  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||||||||||| |||||||||||||||    
T  39856107 ggtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaattacgga 39856038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 121 - 201
Target Start/End: Original strand, 36267555 - 36267635
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaat 201  Q
    ||||||||||||||||  |||||||||||||||||| ||||  | ||| ||||| ||||||||||||||||| ||| ||||    
T  36267555 ggtgtgtttggatggagggtttaggaggggaagggaggggagggcttagttttcttttttaaattacggatattataaaat 36267635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 170 - 309
Target Start/End: Complemental strand, 42087188 - 42087041
Alignment:
Q  170 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttat 261  Q
    |||||||||||||||||||| || |||  ||  ||||||||||||||| ||||||||| ||| |||        ||| |  ||||| |||||||||||||    
T  42087188 ttttcatttttaaattacgggtattatacaaagttttttaaaaagttagcatattaacgtgacaaacgattatataataattcaattacacttaatttat 42087089  T
Q  262 tttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaa 309  Q
    |||| || || |||||||||| | |||||||| |||| ||||||||||    
T  42087088 tttaaaataatatgttatataattcgtaattttaaaaagaaaaataaa 42087041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 121 - 190
Target Start/End: Complemental strand, 31571712 - 31571643
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 190  Q
    ||||||||||||| ||  ||||||||||||||| || ||||  ||||||||||| |||||||||||||||    
T  31571712 ggtgtgtttggattgagggtttaggaggggaagcgaggggagagtttacttttcttttttaaattacgga 31571643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 256 - 320
Target Start/End: Complemental strand, 10315712 - 10315648
Alignment:
Q  256 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcc 320  Q
    |||||||||||||||| ||||||||||||| | |||||||||| ||||| |||| ||||| ||||    
T  10315712 atttattttagaaaaatatgttatatagtctgaaatttaaaaaagaaaagtaaatcctcccctcc 10315648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 166 - 234
Target Start/End: Complemental strand, 19835906 - 19835838
Alignment:
Q  166 ttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa 234  Q
    ||||||||||||||||||||||||| ||||| |||| || |||||||| |||| ||| |||||| ||||    
T  19835906 ttacttttcatttttaaattacggaaactataaaatgttctttaaaaaattaaaataataacatcataa 19835838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 116 - 224
Target Start/End: Original strand, 31553182 - 31553287
Alignment:
Q  116 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 215  Q
    |||| ||||||||||||||||  |||||||||||||||||| | ||  ||  |||||| ||||| |||| ||||| | |||||||| |||||||||||||    
T  31553182 tttagggtgtgtttggatggag-gtttaggaggggaagggaggagagggtc-acttttaatttt-aaataacggacattatgaaatgttttttaaaaagt 31553278  T
Q  216 taacatatt 224  Q
    |||||||||    
T  31553279 taacatatt 31553287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 121 - 298
Target Start/End: Complemental strand, 33519290 - 33519105
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    ||||||||||||||||  |||||||||||||||||| ||||  | ||||||||| | |||||||||| || | ||| ||||  |||||| ||| || |      
T  33519290 ggtgtgtttggatggagggtttaggaggggaagggaggggagggattacttttcttctttaaattacagacattataaaatgatttttagaaaattgaat 33519191  T
Q  221 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaa 298  Q
    ||  ||||||||||        |||| || ||||  ||||||||||||||| | |||||||| |||||| || |||||||||||||    
T  33519190 taacaacatgataaatgatcatataatacttcaaaaacacttaatttatttcaaaaaaacattttatattgttcgtaatttaaaaa 33519105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 175 - 235
Target Start/End: Original strand, 47229888 - 47229948
Alignment:
Q  175 atttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 235  Q
    ||||||||| ||||| || |||||||||||| ||||||||  |||||||||||||||||||    
T  47229888 atttttaaactacgggtattatgaaatatttcttaaaaagcgaacatattaacatgataaa 47229948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 303
Target Start/End: Complemental strand, 48152092 - 48152036
Alignment:
Q  243 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaa 303  Q
    ||||||||||| ||||||||||||||||||||||||||    |||||||||||||| ||||    
T  48152092 tcaatcacactaaatttattttagaaaaacatgttata----ccgtaatttaaaaaagaaa 48152036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 121 - 190
Target Start/End: Complemental strand, 13771188 - 13771119
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 190  Q
    ||||||||| ||| ||  |||||||||||||||||| | ||  ||||||||||| |||||||||||||||    
T  13771188 ggtgtgtttagattgagggtttaggaggggaagggaggtgagagtttacttttcgtttttaaattacgga 13771119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 28074105 - 28074174
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 190  Q
    ||||||||||||| ||| |||||||||||||||||| ||||    | ||||||| |||||||||||||||    
T  28074105 ggtgtgtttggattgaaggtttaggaggggaagggaggggagaactcacttttcttttttaaattacgga 28074174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 121 - 238
Target Start/End: Original strand, 30592255 - 30592372
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 220  Q
    ||||| ||||||||||   |||||||||| |||||| ||||  | ||||||||| |||||||||||| || ||||| ||||  |||||||||| || | |    
T  30592255 ggtgtatttggatggaggatttaggagggaaagggaagggagggcttacttttcttttttaaattacagacactataaaatgatttttaaaaaattgaaa 30592354  T
Q  221 tattaacatgataaataa 238  Q
    || | | |||||||||||    
T  30592355 taatcatatgataaataa 30592372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 121 - 190
Target Start/End: Complemental strand, 34228561 - 34228492
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 190  Q
    |||||||||| || ||| |||||||||| ||||||| ||||   ||||||||||||||| ||||||||||    
T  34228561 ggtgtgtttgaattgaaggtttaggaggagaagggaggggaggatttacttttcattttaaaattacgga 34228492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 235 - 304
Target Start/End: Complemental strand, 38378165 - 38378096
Alignment:
Q  235 ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaa 304  Q
    |||| |||||||| ||| || |||||||||  |||||||||||||||||| |||| |||||||| |||||    
T  38378165 ataatacctcaattacaattgatttatttttaaaaaacatgttatatagttcgtagtttaaaaaagaaaa 38378096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 268 - 321
Target Start/End: Complemental strand, 40196619 - 40196566
Alignment:
Q  268 aaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctccc 321  Q
    ||||||| |||||  |||||||||| ||||||||||| ||||||||||||||||    
T  40196619 aaaacattttatagtgtccgtaattcaaaaatgaaaagtaaaccctcctctccc 40196566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 2087786 - 2087833
Alignment:
Q  166 ttacttttcatttttaaattacggatactatgaaatattttttaaaaa 213  Q
    ||||||||| ||||||||||||||||| ||| ||||| ||||||||||    
T  2087786 ttacttttcttttttaaattacggatattataaaataatttttaaaaa 2087833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 203
Target Start/End: Original strand, 30891039 - 30891078
Alignment:
Q  164 gtttacttttcatttttaaattacggatactatgaaatat 203  Q
    ||||||||||||||||||||||||||| ||||| ||||||    
T  30891039 gtttacttttcatttttaaattacggacactataaaatat 30891078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 188
Target Start/End: Original strand, 37925843 - 37925910
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacg 188  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||| ||||||  |||||||||||||    
T  37925843 ggtgtgtttggattgagggtttaggaggggaagggaggggagggttcacttttattttttaaattacg 37925910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 186
Target Start/End: Original strand, 47390852 - 47390922
Alignment:
Q  116 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 186  Q
    |||| ||||||||||||| ||  | ||||||||||||||||  |||  ||||||||||| |||||||||||    
T  47390852 tttagggtgtgtttggattgaggggttaggaggggaagggagtggagggtttacttttcttttttaaatta 47390922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 299
Target Start/End: Complemental strand, 48013608 - 48013558
Alignment:
Q  249 acacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaat 299  Q
    ||||||||||||||||| |||||||| ||| || || ||||||||||||||    
T  48013608 acacttaatttattttaaaaaaacattttacattgttcgtaatttaaaaat 48013558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 304
Target Start/End: Original strand, 18795727 - 18795788
Alignment:
Q  243 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaa 304  Q
    ||||| |||||| |||| ||||| |||||||| |||||| || ||||||||||||| |||||    
T  18795727 tcaataacacttgatttgttttaaaaaaacattttatattgttcgtaatttaaaaaagaaaa 18795788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 357
Target Start/End: Complemental strand, 28074147 - 28074106
Alignment:
Q  316 tctcccctctcttcccctcataaacctccaatccaaacacac 357  Q
    ||||||||| ||||||||| ||||||| ||||||||||||||    
T  28074147 tctcccctcccttcccctcctaaaccttcaatccaaacacac 28074106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 33655180 - 33655148
Alignment:
Q  283 gtccgtaatttaaaaatgaaaaataaaccctcc 315  Q
    |||||||||||||||||||||| ||||||||||    
T  33655180 gtccgtaatttaaaaatgaaaagtaaaccctcc 33655148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 186
Target Start/End: Complemental strand, 33655349 - 33655285
Alignment:
Q  122 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 186  Q
    |||||||||||| ||  ||||||||||||||| || | ||  ||||||||||| |||||||||||    
T  33655349 gtgtgtttggattgagggtttaggaggggaagagaggcgagggtttacttttcttttttaaatta 33655285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 163 - 191
Target Start/End: Complemental strand, 34235208 - 34235180
Alignment:
Q  163 tgtttacttttcatttttaaattacggat 191  Q
    |||||||||||||||||||||||||||||    
T  34235208 tgtttacttttcatttttaaattacggat 34235180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 357
Target Start/End: Complemental strand, 37925947 - 37925844
Alignment:
Q  249 acacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatc 348  Q
    ||||||||| ||||| | |||||||| ||| || || |||||||||||||  |||| | ||||     |||||||| ||||||||| ||||||  |||||    
T  37925947 acacttaatctatttaaaaaaaacattttacattgttcgtaatttaaaaaataaaagtgaacc-----ctcccctcccttcccctcctaaaccctcaatc 37925853  T
Q  349 caaacacac 357  Q
    |||||||||    
T  37925852 caaacacac 37925844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 104; Significance: 1e-51; HSPs: 3)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 115 - 321
Target Start/End: Original strand, 39182 - 39400
Alignment:
Q  115 ttttatggtgtgtttggatggaaagtttaggaggggaaggga-tgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaa 213  Q
    ||||| ||||||||||||||||  ||||||||||||||  ||  ||||  ||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  39182 ttttagggtgtgtttggatggagggtttaggaggggaaatgagggggagggtttacttttcatttttaaattacggacactatgaaatgttttttaaaaa 39281  T
Q  214 gttaacatattaacatgataaat-aaca----------cctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaa 302  Q
    ||||||||||||||||||||||| | ||          | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  39282 gttaacatattaacatgataaatgatcatataatacttcttcaatcacacttaatttattttagaaaaacatgttacatagtccgtaatttaaaaaagaa 39381  T
Q  303 aaataaaccctcctctccc 321  Q
    || |||||||||| |||||    
T  39382 aagtaaaccctcccctccc 39400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 121 - 190
Target Start/End: Complemental strand, 39432 - 39363
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 190  Q
    ||||||||||||| ||  |||||| |||| |||||| ||||  ||||||||||| |||||||||||||||    
T  39432 ggtgtgtttggattgagggtttagaagggaaagggaggggagggtttacttttcttttttaaattacgga 39363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 357
Target Start/End: Complemental strand, 39259 - 39189
Alignment:
Q  283 gtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 357  Q
    |||||||||||||||||||||| |||||||||    ||||||  |||||||| ||||||  | ||||||||||||    
T  39259 gtccgtaatttaaaaatgaaaagtaaaccctc----cccctcatttcccctcctaaaccctccatccaaacacac 39189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 125 - 315
Target Start/End: Original strand, 16302 - 16500
Alignment:
Q  125 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatt 224  Q
    ||||||||||||  ||||||||||| || ||| ||||  ||||||||||||||||||||||| | | |||||||||| |||| ||||| |||||||||||    
T  16302 tgtttggatggagggtttaggagggaaaaggaggggagggtttacttttcatttttaaattatgaacactatgaaatgttttataaaacgttaacatatt 16401  T
Q  225 aacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 315  Q
    ||||||||||        |||| || ||||||||||||||||||||||||| |||||||||||||||||||| | ||||||| ||||| ||||||||||    
T  16402 aacatgataaacaatcatataatacttcaatcacacttaatttattttagacaaacatgttatatagtccgtgagttaaaaacgaaaagtaaaccctcc 16500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 74; Significance: 9e-34; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 140 - 310
Target Start/End: Complemental strand, 16173 - 15995
Alignment:
Q  140 tttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatga-------- 231  Q
    ||||||||||||||||| |  |  ||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||            
T  16173 tttaggaggggaagggaggaaagagtttatttttcatttttaaattacggatattatgaaatgttttttaaaaagttaacatattaatatgaaaaacaat 16074  T
Q  232 taaataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 310  Q
    || | || || |||||||||| |||||| ||||| ||||||||||||||||||| |||||||||||| ||||| |||||    
T  16073 tataaaatacttcaatcacacataattttttttaaaaaaacatgttatatagtctgtaatttaaaaaagaaaagtaaac 15995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 69; Significance: 8e-31; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 166 - 326
Target Start/End: Complemental strand, 6780 - 6613
Alignment:
Q  166 ttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacat------gataa-ataacacctcaatcacacttaatt 258  Q
    ||||||||| ||||||||||||| | |||||||||||||||| ||||| |||| ||||||||||      ||| | |||| || ||||||||||| ||||    
T  6780 ttacttttcgtttttaaattacgcacactatgaaatatttttaaaaaaattaaaatattaacatataaacgatcatataatacttcaatcacactaaatt 6681  T
Q  259 tattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctc 326  Q
    |||||||||| |||| ||||||||||| |||||||||||| ||||| |||||||||| ||||| ||||    
T  6680 tattttagaataacaagttatatagtctgtaatttaaaaaagaaaagtaaaccctcccctcccttctc 6613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 187
Target Start/End: Original strand, 6581 - 6652
Alignment:
Q  116 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 187  Q
    |||| ||||||||||||| |||  ||||||||| ||||||| ||||  ||||||||||| ||||||||||||    
T  6581 tttagggtgtgtttggattgaagttttaggaggagaagggaggggagggtttacttttcttttttaaattac 6652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 164 - 319
Target Start/End: Complemental strand, 18968 - 18807
Alignment:
Q  164 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa-------taacacctcaatcacacttaa 256  Q
    |||||||||||||||||||||   ||| |||||||| |||||||||| ||||||| ||||||||||||||||       ||| |  ||||| |||| |||    
T  18968 gtttacttttcatttttaaatcgaggacactatgaactattttttaagaagttaatatattaacatgataaagatcatataataattcaatgacacataa 18869  T
Q  257 tttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctc 319  Q
    ||||||||||||| ||||||||||||||| || ||||||||| | ||||||||||||||||||    
T  18868 tttattttagaaagacatgttatatagtctgtcatttaaaaaag-aaaataaaccctcctctc 18807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 64; Significance: 8e-28; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 118 - 298
Target Start/End: Complemental strand, 15507 - 15320
Alignment:
Q  118 tatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagtta 217  Q
    |||||||||||||||||||  |||||||| |||||||||   ||   | ||||||| |||||||||||||||| |||||||| | |||||||||| || |    
T  15507 tatggtgtgtttggatggagggtttaggaagggaagggaaatgaggatctactttttatttttaaattacggacactatgaa-tgttttttaaaaggtca 15409  T
Q  218 acatattaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaa 298  Q
    |||||||||| |||||||        ||| || |||| |||||||||||||||||||||||||||||||| || |||||| ||||||||    
T  15408 acatattaacgtgataaacaatcatataatacttcaaccacacttaatttattttagaaaaacatgttatgtaatccgtagtttaaaaa 15320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 158 - 358
Target Start/End: Complemental strand, 1377 - 1174
Alignment:
Q  158 gggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa------------taacacctca 245  Q
    ||||| ||||||||||||||||||||||| | | |||||||||| ||||||||||||||||||||||  |||||||||            ||| || |||    
T  1377 gggaaggtttacttttcatttttaaattatgaacactatgaaatgttttttaaaaagttaacatattgtcatgataaacgatcatatatataatacttca 1278  T
Q  246 atcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctcca 345  Q
     ||| |||||||||    ||||| ||||||||| ||||||||||||||||||| ||||| ||||     |||||||||||||||||||| ||||||  ||    
T  1277 gtcatacttaattt----tagaataacatgttacatagtccgtaatttaaaaaagaaaagtaaa-----ctctcccctctcttcccctcctaaaccctca 1187  T
Q  346 atccaaacacact 358  Q
    |||||||||||||    
T  1186 atccaaacacact 1174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 190
Target Start/End: Original strand, 1175 - 1243
Alignment:
Q  122 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 190  Q
    |||||||||||| ||  ||||||||||||||| || ||||  ||||||||||| |||||||||||||||    
T  1175 gtgtgtttggattgagggtttaggaggggaagagaggggagagtttacttttcttttttaaattacgga 1243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 122 - 207
Target Start/End: Original strand, 3150 - 3235
Alignment:
Q  122 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttt 207  Q
    |||||||||||| || ||||||||||||||||||| ||||  ||||||||||| |||||||||||| || |||||||||| |||||    
T  3150 gtgtgtttggattgagagtttaggaggggaagggaggggagagtttacttttcttttttaaattacagacactatgaaatgttttt 3235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 123 - 213
Target Start/End: Complemental strand, 242456 - 242366
Alignment:
Q  123 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaa 213  Q
    ||||||||||||||  |||||  ||||||||||| ||||  ||||||||||| ||||||||||||||| | ||| ||||  ||||||||||    
T  242456 tgtgtttggatggatggtttataaggggaagggaggggagggtttacttttcttttttaaattacggacattataaaatgatttttaaaaa 242366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 187
Target Start/End: Complemental strand, 17780 - 17716
Alignment:
Q  121 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 187  Q
    ||||||||||||||||  ||||||||| |||||||| |||   ||||||||||| ||||||||||||    
T  17780 ggtgtgtttggatggagggtttaggagtggaagggagggg--ggtttacttttcttttttaaattac 17716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 184847 - 184784
Alignment:
Q  123 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 186  Q
    ||||||||||||||  ||||||||||| |||||| ||||  ||||||| ||| |||||||||||    
T  184847 tgtgtttggatggagggtttaggagggaaagggaagggagggtttactattcttttttaaatta 184784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University