View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15500_low_1 (Length: 534)

Name: NF15500_low_1
Description: NF15500
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15500_low_1
NF15500_low_1
[»] chr7 (42 HSPs)
chr7 (17-534)||(12419454-12419971)
chr7 (97-495)||(7398156-7398555)
chr7 (100-495)||(27237421-27237820)
chr7 (216-534)||(23858901-23859216)
chr7 (216-365)||(26917810-26917957)
chr7 (216-364)||(23020611-23020757)
chr7 (335-494)||(9021799-9021957)
chr7 (216-480)||(20153030-20153290)
chr7 (380-495)||(12981315-12981430)
chr7 (377-495)||(2611260-2611378)
chr7 (380-494)||(6765680-6765794)
chr7 (377-495)||(36891564-36891682)
chr7 (309-365)||(17800349-17800403)
chr7 (127-199)||(38971140-38971212)
chr7 (392-495)||(8171537-8171640)
chr7 (410-534)||(23744815-23744939)
chr7 (392-495)||(38414874-38414977)
chr7 (410-494)||(21763586-21763670)
chr7 (415-495)||(26254017-26254097)
chr7 (449-494)||(9014177-9014222)
chr7 (392-496)||(20091278-20091382)
chr7 (392-495)||(19692095-19692198)
chr7 (395-493)||(36902924-36903022)
chr7 (100-208)||(36903588-36903695)
chr7 (392-484)||(12596296-12596388)
chr7 (318-365)||(23551175-23551220)
chr7 (318-365)||(25010386-25010431)
chr7 (318-365)||(38414980-38415025)
chr7 (392-496)||(48983841-48983945)
chr7 (452-495)||(18776764-18776807)
chr7 (452-495)||(29077281-29077324)
chr7 (318-363)||(19692047-19692090)
chr7 (455-534)||(23020443-23020522)
chr7 (392-490)||(24525688-24525786)
chr7 (415-484)||(8239711-8239780)
chr7 (100-200)||(9021962-9022063)
chr7 (332-365)||(24525789-24525822)
chr7 (318-361)||(8239638-8239679)
chr7 (392-484)||(10955485-10955577)
chr7 (318-365)||(20091385-20091430)
chr7 (392-472)||(23551092-23551172)
chr7 (318-365)||(47985074-47985119)
[»] chr5 (51 HSPs)
chr5 (117-495)||(2024638-2025019)
chr5 (100-495)||(11242314-11242714)
chr5 (99-495)||(34425609-34426007)
chr5 (185-494)||(2411882-2412191)
chr5 (278-494)||(14318382-14318595)
chr5 (103-494)||(10543392-10543776)
chr5 (216-495)||(40794323-40794598)
chr5 (100-304)||(15639160-15639369)
chr5 (379-534)||(2530855-2531009)
chr5 (377-495)||(36868872-36868990)
chr5 (382-493)||(22648734-22648845)
chr5 (333-495)||(33037721-33037884)
chr5 (216-303)||(34307320-34307407)
chr5 (313-472)||(15639570-15639724)
chr5 (216-331)||(26719054-26719169)
chr5 (216-331)||(26988798-26988913)
chr5 (377-533)||(1366484-1366640)
chr5 (309-495)||(10407378-10407565)
chr5 (392-495)||(27079012-27079115)
chr5 (241-355)||(24395590-24395702)
chr5 (395-534)||(26718906-26719045)
chr5 (395-534)||(26988650-26988789)
chr5 (452-495)||(606215-606258)
chr5 (392-495)||(30854330-30854433)
chr5 (392-495)||(34756362-34756465)
chr5 (379-484)||(24395727-24395832)
chr5 (392-484)||(9364292-9364384)
chr5 (392-484)||(16198801-16198893)
chr5 (452-496)||(27530544-27530588)
chr5 (392-495)||(28822338-28822441)
chr5 (318-365)||(7670877-7670922)
chr5 (318-365)||(16198896-16198941)
chr5 (392-484)||(19523200-19523292)
chr5 (393-481)||(27924084-27924172)
chr5 (318-365)||(28822444-28822489)
chr5 (415-495)||(31881430-31881510)
chr5 (455-495)||(35080766-35080806)
chr5 (318-365)||(38869465-38869510)
chr5 (452-483)||(22875003-22875034)
chr5 (392-495)||(23284058-23284161)
chr5 (452-495)||(31194608-31194651)
chr5 (392-495)||(38869359-38869462)
chr5 (452-494)||(7338060-7338102)
chr5 (390-484)||(36187886-36187980)
chr5 (410-484)||(40389543-40389617)
chr5 (452-484)||(2274951-2274983)
chr5 (309-364)||(7079552-7079605)
chr5 (452-484)||(15480096-15480128)
chr5 (392-484)||(16799334-16799426)
chr5 (97-165)||(34307416-34307484)
chr5 (318-365)||(40389638-40389683)
[»] chr1 (42 HSPs)
chr1 (100-495)||(39134720-39135125)
chr1 (216-495)||(10925951-10926219)
chr1 (188-494)||(26803758-26804059)
chr1 (320-494)||(38547035-38547207)
chr1 (377-495)||(45758491-45758609)
chr1 (380-494)||(6221678-6221791)
chr1 (309-495)||(5533242-5533428)
chr1 (384-495)||(38853527-38853637)
chr1 (310-494)||(43235767-43235951)
chr1 (392-490)||(9173026-9173124)
chr1 (392-490)||(9181008-9181106)
chr1 (392-484)||(14146312-14146404)
chr1 (392-495)||(5316692-5316795)
chr1 (392-495)||(23185439-23185542)
chr1 (392-494)||(4971617-4971719)
chr1 (392-493)||(1366878-1366979)
chr1 (390-495)||(50881440-50881545)
chr1 (415-495)||(6889646-6889726)
chr1 (415-495)||(6891492-6891572)
chr1 (448-495)||(17322621-17322668)
chr1 (390-484)||(6771801-6771895)
chr1 (392-482)||(19955729-19955819)
chr1 (410-495)||(5027579-5027664)
chr1 (410-495)||(21740935-21741020)
chr1 (318-365)||(9181109-9181154)
chr1 (318-365)||(19955681-19955726)
chr1 (392-484)||(27559649-27559741)
chr1 (392-484)||(41697146-41697238)
chr1 (318-365)||(44895616-44895661)
chr1 (391-495)||(50146307-50146411)
chr1 (452-495)||(22865459-22865502)
chr1 (452-495)||(44655813-44655856)
chr1 (127-212)||(50146068-50146154)
chr1 (410-495)||(35392300-35392384)
chr1 (318-365)||(1366982-1367027)
chr1 (452-484)||(3406490-3406522)
chr1 (452-484)||(3440298-3440330)
chr1 (318-365)||(4971722-4971767)
chr1 (318-365)||(9173127-9173172)
chr1 (318-365)||(13913586-13913631)
chr1 (452-484)||(16140127-16140159)
chr1 (318-365)||(23185391-23185436)
[»] chr2 (39 HSPs)
chr2 (97-495)||(21665699-21666099)
chr2 (100-444)||(11952656-11953009)
chr2 (184-494)||(16227368-16227683)
chr2 (221-534)||(24035505-24035816)
chr2 (239-534)||(13800504-13800797)
chr2 (101-496)||(12134038-12134426)
chr2 (183-493)||(38400587-38400899)
chr2 (100-365)||(29694087-29694357)
chr2 (292-494)||(11912757-11912958)
chr2 (278-434)||(37182558-37182712)
chr2 (382-495)||(16096998-16097111)
chr2 (377-495)||(7742132-7742251)
chr2 (309-405)||(10252326-10252421)
chr2 (448-534)||(22727417-22727503)
chr2 (392-495)||(6965007-6965110)
chr2 (392-495)||(12337447-12337550)
chr2 (392-494)||(10762565-10762667)
chr2 (392-490)||(24410437-24410535)
chr2 (393-482)||(27506752-27506841)
chr2 (392-495)||(9046029-9046133)
chr2 (109-169)||(24035863-24035923)
chr2 (392-495)||(3155217-3155320)
chr2 (392-495)||(4505894-4505997)
chr2 (392-495)||(29939861-29939964)
chr2 (430-534)||(34694013-34694117)
chr2 (430-534)||(34716425-34716529)
chr2 (183-270)||(37622543-37622639)
chr2 (455-494)||(42029208-42029247)
chr2 (377-495)||(28425709-28425827)
chr2 (318-365)||(8327618-8327663)
chr2 (458-494)||(11952588-11952624)
chr2 (392-495)||(26716128-26716232)
chr2 (452-495)||(40636198-40636241)
chr2 (452-494)||(10252476-10252518)
chr2 (452-484)||(3953066-3953098)
chr2 (452-484)||(7162844-7162876)
chr2 (452-484)||(8907089-8907121)
chr2 (318-365)||(10762670-10762715)
chr2 (318-365)||(27506845-27506890)
[»] chr8 (46 HSPs)
chr8 (219-495)||(15167414-15167686)
chr8 (102-494)||(34048705-34049103)
chr8 (183-534)||(15078548-15078901)
chr8 (278-495)||(41677172-41677387)
chr8 (310-534)||(7944482-7944704)
chr8 (191-495)||(8646001-8646309)
chr8 (309-495)||(11290104-11290288)
chr8 (379-494)||(39332405-39332520)
chr8 (392-495)||(41879182-41879285)
chr8 (382-495)||(5973106-5973219)
chr8 (292-365)||(25561635-25561706)
chr8 (377-490)||(23941095-23941208)
chr8 (377-472)||(5942682-5942777)
chr8 (244-363)||(38009267-38009384)
chr8 (392-496)||(2952219-2952323)
chr8 (377-484)||(5721545-5721652)
chr8 (392-495)||(30883330-30883433)
chr8 (103-166)||(7944763-7944826)
chr8 (385-480)||(8102906-8103001)
chr8 (392-495)||(45475818-45475921)
chr8 (452-494)||(9108554-9108596)
chr8 (100-166)||(25562010-25562076)
chr8 (332-495)||(34789861-34790024)
chr8 (392-482)||(42600783-42600873)
chr8 (412-534)||(30674363-30674485)
chr8 (392-495)||(13534686-13534788)
chr8 (392-495)||(13624226-13624328)
chr8 (392-495)||(23606628-23606731)
chr8 (320-365)||(8102845-8102888)
chr8 (392-494)||(23798261-23798363)
chr8 (452-494)||(34868177-34868219)
chr8 (392-534)||(10917392-10917534)
chr8 (410-494)||(5860744-5860828)
chr8 (309-364)||(5973235-5973288)
chr8 (318-365)||(23606734-23606779)
chr8 (318-365)||(23798366-23798411)
chr8 (455-495)||(38009151-38009191)
chr8 (310-364)||(30674507-30674559)
chr8 (95-157)||(5973367-5973429)
chr8 (100-166)||(38009479-38009545)
chr8 (392-481)||(3048530-3048619)
chr8 (100-144)||(8645917-8645961)
chr8 (318-365)||(10917344-10917389)
chr8 (452-484)||(37430168-37430200)
chr8 (318-365)||(42600735-42600780)
chr8 (318-365)||(45475770-45475815)
[»] chr4 (56 HSPs)
chr4 (216-495)||(52468118-52468395)
chr4 (103-491)||(27111747-27112135)
chr4 (216-534)||(36118418-36118732)
chr4 (183-481)||(40217020-40217327)
chr4 (105-484)||(15734807-15735188)
chr4 (188-365)||(37746849-37747028)
chr4 (300-534)||(39329351-39329583)
chr4 (231-483)||(2135331-2135578)
chr4 (216-495)||(24396769-24397043)
chr4 (211-492)||(36178498-36178778)
chr4 (285-495)||(36362869-36363076)
chr4 (392-495)||(2790739-2790842)
chr4 (380-495)||(10041998-10042113)
chr4 (377-490)||(45656166-45656279)
chr4 (382-473)||(4167911-4168002)
chr4 (382-484)||(37744918-37745021)
chr4 (413-496)||(39655251-39655334)
chr4 (392-495)||(54780783-54780886)
chr4 (95-267)||(4168097-4168268)
chr4 (332-495)||(51691913-51692078)
chr4 (392-495)||(43455529-43455632)
chr4 (392-495)||(47128993-47129096)
chr4 (452-494)||(24614019-24614061)
chr4 (453-495)||(30507120-30507162)
chr4 (392-494)||(38209590-38209692)
chr4 (309-365)||(30507200-30507254)
chr4 (392-495)||(19498510-19498611)
chr4 (392-484)||(37777232-37777324)
chr4 (392-496)||(54083239-54083343)
chr4 (392-534)||(34027585-34027727)
chr4 (424-480)||(11906904-11906960)
chr4 (318-365)||(16882499-16882544)
chr4 (318-365)||(19498462-19498507)
chr4 (318-365)||(32128542-32128587)
chr4 (392-484)||(32915391-32915483)
chr4 (318-365)||(34027537-34027582)
chr4 (318-365)||(40089474-40089519)
chr4 (452-495)||(9578662-9578705)
chr4 (452-495)||(10978966-10979009)
chr4 (392-495)||(34768572-34768675)
chr4 (392-471)||(40089522-40089601)
chr4 (452-495)||(48209306-48209349)
chr4 (318-364)||(54083347-54083391)
chr4 (216-270)||(39329625-39329679)
chr4 (390-483)||(5128852-5128945)
chr4 (309-365)||(22077110-22077164)
chr4 (410-495)||(32128608-32128693)
chr4 (452-484)||(1105598-1105630)
chr4 (452-484)||(10428206-10428238)
chr4 (452-484)||(13460273-13460305)
chr4 (318-365)||(16844979-16845024)
chr4 (455-495)||(16922327-16922367)
chr4 (318-365)||(24969395-24969440)
chr4 (452-484)||(37514725-37514757)
chr4 (318-365)||(38352359-38352404)
chr4 (216-269)||(50677231-50677288)
[»] chr6 (24 HSPs)
chr6 (103-491)||(2477587-2477976)
chr6 (216-484)||(20611620-20611886)
chr6 (381-483)||(21183686-21183788)
chr6 (380-491)||(6159430-6159541)
chr6 (410-494)||(30121784-30121868)
chr6 (392-484)||(28075787-28075879)
chr6 (392-495)||(13727398-13727501)
chr6 (392-495)||(20711719-20711822)
chr6 (392-495)||(21479498-21479601)
chr6 (392-484)||(24711009-24711101)
chr6 (392-484)||(33774121-33774213)
chr6 (335-471)||(4036895-4037031)
chr6 (392-483)||(27788699-27788790)
chr6 (396-494)||(1155849-1155947)
chr6 (393-495)||(21280550-21280652)
chr6 (390-495)||(34397859-34397964)
chr6 (103-174)||(20611510-20611582)
chr6 (310-361)||(30121698-30121747)
chr6 (392-484)||(30832534-30832626)
chr6 (392-495)||(19737691-19737794)
chr6 (94-206)||(4036783-4036896)
chr6 (332-365)||(17353922-17353955)
chr6 (392-484)||(17353958-17354050)
chr6 (318-365)||(19987117-19987162)
[»] chr3 (42 HSPs)
chr3 (107-495)||(26279254-26279649)
chr3 (278-484)||(28689371-28689574)
chr3 (222-495)||(52374500-52374763)
chr3 (231-362)||(42453257-42453386)
chr3 (309-495)||(8420249-8420433)
chr3 (309-494)||(49393014-49393195)
chr3 (309-495)||(54574826-54575010)
chr3 (377-494)||(25855411-25855527)
chr3 (309-494)||(789860-790042)
chr3 (309-461)||(29598031-29598179)
chr3 (392-484)||(47467688-47467780)
chr3 (392-495)||(21582775-21582878)
chr3 (392-495)||(53506883-53506986)
chr3 (392-495)||(54619202-54619305)
chr3 (449-495)||(23641317-23641363)
chr3 (393-495)||(37168372-37168474)
chr3 (410-496)||(54407156-54407242)
chr3 (394-495)||(38681092-38681193)
chr3 (415-495)||(3953895-3953975)
chr3 (386-494)||(32319155-32319263)
chr3 (392-495)||(34290635-34290738)
chr3 (452-495)||(42453468-42453511)
chr3 (392-495)||(43207237-43207339)
chr3 (309-365)||(36179629-36179683)
chr3 (392-484)||(8073348-8073440)
chr3 (318-365)||(43207342-43207387)
chr3 (392-484)||(44708481-44708573)
chr3 (392-484)||(53149324-53149416)
chr3 (318-365)||(53506989-53507034)
chr3 (318-365)||(54407262-54407307)
chr3 (392-483)||(9878698-9878789)
chr3 (452-495)||(18372547-18372590)
chr3 (452-495)||(36716024-36716067)
chr3 (392-482)||(50939245-50939335)
chr3 (377-427)||(52973385-52973435)
chr3 (101-166)||(23641460-23641525)
chr3 (452-484)||(27078579-27078611)
chr3 (452-484)||(27084376-27084408)
chr3 (318-365)||(34290741-34290786)
chr3 (318-365)||(37168323-37168368)
chr3 (452-484)||(42098865-42098897)
chr3 (318-365)||(44708433-44708478)
[»] scaffold1320 (1 HSPs)
scaffold1320 (183-534)||(1144-1497)
[»] scaffold0007 (2 HSPs)
scaffold0007 (186-495)||(230858-231167)
scaffold0007 (99-166)||(232544-232611)
[»] scaffold0018 (1 HSPs)
scaffold0018 (231-489)||(173515-173771)
[»] scaffold0022 (2 HSPs)
scaffold0022 (309-496)||(40003-40192)
scaffold0022 (309-496)||(138063-138252)
[»] scaffold1590 (2 HSPs)
scaffold1590 (377-495)||(257-375)
scaffold1590 (97-166)||(432-501)
[»] scaffold0097 (2 HSPs)
scaffold0097 (101-209)||(38798-38907)
scaffold0097 (380-490)||(38914-39024)
[»] scaffold0012 (1 HSPs)
scaffold0012 (386-494)||(206489-206597)
[»] scaffold0182 (1 HSPs)
scaffold0182 (377-494)||(23993-24110)
[»] scaffold0039 (2 HSPs)
scaffold0039 (392-495)||(106539-106642)
scaffold0039 (318-365)||(106491-106536)
[»] scaffold0227 (3 HSPs)
scaffold0227 (380-433)||(16016-16069)
scaffold0227 (452-484)||(16126-16158)
scaffold0227 (309-365)||(15948-16003)
[»] scaffold0070 (1 HSPs)
scaffold0070 (392-484)||(1344-1436)
[»] scaffold0003 (2 HSPs)
scaffold0003 (383-433)||(350269-350319)
scaffold0003 (383-468)||(351360-351445)
[»] scaffold0001 (1 HSPs)
scaffold0001 (433-484)||(183102-183153)


Alignment Details
Target: chr7 (Bit Score: 435; Significance: 0; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 435; E-Value: 0
Query Start/End: Original strand, 17 - 534
Target Start/End: Complemental strand, 12419971 - 12419454
Alignment:
Q  17 gggggagagggggaggagagagaaagaaattctaaaaatttagagaactctttgctctgatttgtgagttatatgtagagcaaggccggaccttggggtc 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12419971 gggggagagggggaggagagagaaagaaattctaaaaatttagagaactctttgctctgatttgtgagttatatgtagagcagggccggaccttggggtc 12419872  T
Q  117 tgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaataatataggccggtaatactactaagtactaccctactaaaaacaaaatt 216  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  12419871 tgcaaggagttcaatggaaccgggcctcaccaaggtatgggcctaaaaaaaaatataggccggtaatactactaagtactaccctactaaaaacaaaatt 12419772  T
Q  217 tctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcagttgtctt 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||    
T  12419771 tctttttctctctgataccatgcgttccatcaccatcactccatcggactttcctttttttcttctccgatttgatttccttttcctcgtcagttgtctt 12419672  T
Q  317 gttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaatagtgat 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||    
T  12419671 gttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtatttttttgggagggtggtttgaggttcctcatgtattcaatagtgat 12419572  T
Q  417 tttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttttnnnnnnntacgttgttattt 516  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||        |||||||||||||    
T  12419571 tttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacattgttcttttaaaaaaaatacgttgttattt 12419472  T
Q  517 tattacgggcctcttttc 534  Q
    ||||||||||||||||||    
T  12419471 tattacgggcctcttttc 12419454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 97 - 495
Target Start/End: Original strand, 7398156 - 7398555
Alignment:
Q  97 caaggccggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaataat-ataggccggtaatactactaagtac 195  Q
    ||||| ||||||||||||| ||||| ||| |||||||| ||| ||||| |||||||||||||||||| || | | |||| || ||| |||||||||||||    
T  7398156 caaggtcggaccttggggtgtgcaacgagctcaatggagctgagcctccccaaggtatgggcctaaataaaatttatagcccagtagtactactaagtac 7398255  T
Q  196 taccctactaaaaacaaaatttctttt---tctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgat 292  Q
    |||||  ||||||| ||   || ||||   ||||||| |||||| ||||||||||| ||||||||||||||||| |||       | || ||||||||||    
T  7398256 tacccc-ctaaaaaaaattcttattttctttctctctaataccacgcgttccatcaacatcactccatcggactctccttttcttcatccccgatttgat 7398354  T
Q  293 ttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgag 392  Q
    |||||||| ||| |  |||||||||||||||||||||||  |||||||||||||||||||||||||||| |||  |        ||||||||||||||||    
T  7398355 ttccttttgctcttttgttgtcttgttttaggcctatta--gaattgggtcctcttgcttttggtgttacgtggatgtttttttgggagggtggtttgag 7398452  T
Q  393 gttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttct 492  Q
    |||||||||||||    |||||||||||| |||| | ||||||||| ||||| || || |||||||||||||| |||||||||||||||||| |||||||    
T  7398453 gttcctcatgtatatggtagtgattttcacctttaggtgtatcacatatatatggcaccttgtatttatctttcaaaaaatttaaatagaacattgttct 7398552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 100 - 495
Target Start/End: Complemental strand, 27237820 - 27237421
Alignment:
Q  100 ggccggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaataa-tataggccggtaatactactaagtactac 198  Q
    |||||||| ||||||| ||||| ||| ||||||||  |||||||| |  ||||||||| |||||||| || ||||   |  ||  |||| ||||||||||    
T  27237820 ggccggactttggggtgtgcaaagagctcaatggagttgggcctccctgaggtatgggtctaaaaaaaaactataactcaatagcactaataagtactac 27237721  T
Q  199 cctactaaaaacaaaat-----ttctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatt 293  Q
    || |||||||| ||| |     |||| | |||||||||||||| |||||||||||||||||||||||||||||||||       |||| |||||||||||    
T  27237720 cccactaaaaaaaaattaatttttctctatctctctgataccacgcgttccatcaccatcactccatcggactttccttttcttcttccccgatttgatt 27237621  T
Q  294 tccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgagg 393  Q
    ||||||| ||| |  |||||||||||||||||||||  |||||||||||| |||||||| |||||||||||| ||        |||||||||||||||||    
T  27237620 tcctttttctcttttgttgtcttgttttaggcctat--tagaattgggtcatcttgcttatggtgttaggtgagtgtttttttgggagggtggtttgagg 27237523  T
Q  394 ttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctt 493  Q
    |||||||||||| | ||||||||||||| |||| |||  |||||| |||||    || ||||||||||||||||||||||||||||||||| ||||||||    
T  27237522 ttcctcatgtatacgatagtgattttcacctttagattcatcacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttctt 27237423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 216 - 534
Target Start/End: Original strand, 23858901 - 23859216
Alignment:
Q  216 ttctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcagttgtct 315  Q
    |||| |||||||||||||||| ||||||||||||||||||| |||| ||||| ||       |||| || |||||||||| |||||||| || ||| |||    
T  23858901 ttctctttctctctgataccacgcgttccatcaccatcactgcatcagactt-ccttttcttcttccccaatttgatttcattttcctcttccgttatct 23858999  T
Q  316 tgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaatagtga 415  Q
    ||||||||||||||||  ||||||||||||||||| |||||||||||||| ||        ||||||||||||||||| ||||||||||| |  |||| |    
T  23859000 tgttttaggcctatta--gaattgggtcctcttgcatttggtgttaggtgggtgtttttttgggagggtggtttgaggatcctcatgtatacggtagtaa 23859097  T
Q  416 ttttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttttnnnnnnntacgttgttatt 515  Q
    ||||||||||||| |||||| || ||||| ||||||||||||||||||||||||||||||||||||||| || |||| ||        |||||| |||||    
T  23859098 ttttcatctttgggtgtatcgcatatatacggtacattgtatttatcttttaaaaaatttaaatagaacattattctcttaaacaaaatacgtttttatt 23859197  T
Q  516 ttattacgggcctcttttc 534  Q
    ||||||| || ||||||||    
T  23859198 ttattacaggtctcttttc 23859216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 216 - 365
Target Start/End: Complemental strand, 26917957 - 26917810
Alignment:
Q  216 ttctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcagttgtct 315  Q
    |||| ||||| |||||||||||| ||| |||||||||||||||||| |||||| |       |||| ||||||||||||| |||||||| || |||||||    
T  26917957 ttctctttctatctgataccatgtgtttcatcaccatcactccatcagactttacttttcatcttccccgatttgatttcattttcctcttctgttgtct 26917858  T
Q  316 tgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    |||||||||| |||  |||||||||||| |||||||||||||||||||||    
T  26917857 tgttttaggcttat--tagaattgggtcttcttgcttttggtgttaggtg 26917810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 216 - 364
Target Start/End: Complemental strand, 23020757 - 23020611
Alignment:
Q  216 ttctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcagttgtct 315  Q
    |||| |||||||||||||||| ||||||||||||||||| |||||||||||||||       |||| ||||||||||||| |||||||| |  |||||||    
T  23020757 ttctctttctctctgataccacgcgttccatcaccatcattccatcggactttccttttcttcttccccgatttgatttctttttcctcttttgttgtct 23020658  T
Q  316 tgttttaggcctattatagaattgggtcctcttgcttttggtgttaggt 364  Q
    |||||||| |||||  |||||||||||| | || |||||||||||||||    
T  23020657 tgttttagacctat--tagaattgggtcatattacttttggtgttaggt 23020611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 335 - 494
Target Start/End: Complemental strand, 9021957 - 9021799
Alignment:
Q  335 aattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtat 434  Q
    ||||| || ||||||||||||||||||||||  |        |||||||||||||||||| |||||||||| |  |||||||||||| |||||| ||||     
T  9021957 aattgagttctcttgcttttggtgttaggtggatgtttttttgggagggtggtttgaggt-cctcatgtatacggtagtgattttcacctttgggtgtac 9021859  T
Q  435 cacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttcttt 494  Q
    | || ||||| || ||||||||||||||||||||||||||||||||| |  |||||||||    
T  9021858 cgcatatatacggcacattgtatttatcttttaaaaaatttaaatagcaaattgttcttt 9021799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 216 - 480
Target Start/End: Original strand, 20153030 - 20153290
Alignment:
Q  216 ttctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcagttgtct 315  Q
    |||| ||||||||||||||||  |||||||||||||||||||||| |||||||         |||| ||||||||||||| |||| ||| |  |||||||    
T  20153030 ttctctttctctctgataccacacgttccatcaccatcactccattggactttgtttttcttcttccccgatttgatttcttttttctcatatgttgtct 20153129  T
Q  316 tgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaatagtga 415  Q
    ||||||||||||||||  |||||  ||||  ||||||||| |||||||||  |           ||||||||||||| | |||||||||| |   |||||    
T  20153130 tgttttaggcctatta--gaattaagtcccattgcttttgatgttaggtggatgttttttta--agggtggtttgagatccctcatgtatacggcagtga 20153225  T
Q  416 ttttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaata 480  Q
    ||||||||||||| | |||| || |||||    || |||||||||||||||||||||||||||||    
T  20153226 ttttcatctttgggtttatcgcatatatacaacactttgtatttatcttttaaaaaatttaaata 20153290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 380 - 495
Target Start/End: Original strand, 12981315 - 12981430
Alignment:
Q  380 agggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaat 479  Q
    |||||||||||||||||||||| ||| || |||||||||||| |||||  |||| | |  ||||| || || ||||||||||||||||||||| ||||||    
T  12981315 agggtggtttgaggttcctcatatatacagtagtgattttcacctttgtgtgtaccgcgtatatatggaaccttgtatttatcttttaaaaaaattaaat 12981414  T
Q  480 agaacgttgttctttt 495  Q
    ||||| || |||||||    
T  12981415 agaacattcttctttt 12981430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 377 - 495
Target Start/End: Complemental strand, 2611378 - 2611260
Alignment:
Q  377 gggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaattta 476  Q
    |||||| | |||||||||||||||||||| || | |||||||||| | |||  |||| | || ||||| |  || |||||||||||||||||||||||||    
T  2611378 gggaggatcgtttgaggttcctcatgtatacagttgtgattttcaccattgtgtgtaccgcatatatacgacaccttgtatttatcttttaaaaaattta 2611279  T
Q  477 aatagaacgttgttctttt 495  Q
    |||||||| ||||||||||    
T  2611278 aatagaacattgttctttt 2611260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 380 - 494
Target Start/End: Complemental strand, 6765794 - 6765680
Alignment:
Q  380 agggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaat 479  Q
    |||||||||||||||| ||| | ||| |  |||||||||||| |||||||||||   |  ||||| |  || ||||||||||||||||||||||||||||    
T  6765794 agggtggtttgaggttactcttatatacggtagtgattttcacctttggatgtacggcttatatacgacaccttgtatttatcttttaaaaaatttaaat 6765695  T
Q  480 agaacgttgttcttt 494  Q
    ||||| |||||||||    
T  6765694 agaacattgttcttt 6765680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 377 - 495
Target Start/End: Original strand, 36891564 - 36891682
Alignment:
Q  377 gggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaattta 476  Q
    |||||| |||||||||||||||||||||| |  |||||||||||| ||||||||||| |  | |||||    |||||||||| ||| |||||||||| ||    
T  36891564 gggaggatggtttgaggttcctcatgtatacggtagtgattttcacctttggatgtaccgaatatatacaacacattgtattcatcatttaaaaaatata 36891663  T
Q  477 aatagaacgttgttctttt 495  Q
    |||||||| || |||||||    
T  36891664 aatagaacattattctttt 36891682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 309 - 365
Target Start/End: Complemental strand, 17800403 - 17800349
Alignment:
Q  309 gttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  17800403 gttgtcttgttttaggcctatta--gaattgggtcctcttgcttttggtgttaggtg 17800349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 199
Target Start/End: Original strand, 38971140 - 38971212
Alignment:
Q  127 tcaatggaactgggcctcaccaaggtatgggcctaaaaaataatataggccggtaatactactaagtactacc 199  Q
    |||||||||||||| ||| |||| |||| ||||||||||| ||||||| || |||||||||||||||||||||    
T  38971140 tcaatggaactgggtctccccaaagtattggcctaaaaaaaaatatagcccagtaatactactaagtactacc 38971212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 8171640 - 8171537
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||||||||||| |  |||| |||||||||| ||| |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||| ||    
T  8171640 ggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 8171541  T
Q  492 tttt 495  Q
    ||||    
T  8171540 tttt 8171537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 410 - 534
Target Start/End: Original strand, 23744815 - 23744939
Alignment:
Q  410 tagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttttnnnnnnntacgtt 509  Q
    |||||||||| |||||| | |||| | || ||||  || || |||||||||||||||||||||||||| |||||| |||||||||||       ||| ||    
T  23744815 tagtgatttttatctttaggtgtaccgcatatatgcggcaccttgtatttatcttttaaaaaatttaattagaacattgttctttttaaaaaaatacatt 23744914  T
Q  510 gttattttattacgggcctcttttc 534  Q
     ||||||| ||||||||||||||||    
T  23744915 tttatttttttacgggcctcttttc 23744939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 38414977 - 38414874
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||||||||||| || |||| ||||||| |||||| |||| |||| ||||| |  || || |||||||||||||||||||  ||||||||||||| ||    
T  38414977 ggttcctcatgtatacagtagtcattttcacctttgggtgtaccacatatatacgtcaccttatatttatcttttaaaaaatacaaatagaacgttgctc 38414878  T
Q  492 tttt 495  Q
    ||||    
T  38414877 tttt 38414874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 410 - 494
Target Start/End: Complemental strand, 21763670 - 21763586
Alignment:
Q  410 tagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttcttt 494  Q
    ||||||||||||  ||| | |||||| || ||||| | ||| |||||||||||||||||||||||||||||||||  ||||||||    
T  21763670 tagtgattttcactttttggtgtatcgcatatatacgatactttgtatttatcttttaaaaaatttaaatagaacaatgttcttt 21763586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 415 - 495
Target Start/End: Original strand, 26254017 - 26254097
Alignment:
Q  415 attttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttt 495  Q
    |||||||||||||| |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||| ||||||    
T  26254017 attttcatctttgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 26254097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 449 - 494
Target Start/End: Complemental strand, 9014222 - 9014177
Alignment:
Q  449 acattgtatttatcttttaaaaaatttaaatagaacgttgttcttt 494  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||    
T  9014222 acattgtatttatcttttaaaaaatttaaataaaacattgttcttt 9014177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 392 - 496
Target Start/End: Complemental strand, 20091382 - 20091278
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||||||||||| |  |||| ||||||| |||||| |||| | || ||||| || || || ||||||||||||||||||| |||||||| | |||||     
T  20091382 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagatcattgttt 20091283  T
Q  492 ttttt 496  Q
    |||||    
T  20091282 ttttt 20091278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 19692095 - 19692198
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||||||||||| | | ||| ||||||| |||| | |||| | || ||||| || || || ||||||||||||||||||| |||||||||| ||| ||    
T  19692095 ggttcctcatgtatacgaaagtcattttcacctttaggtgtaccgcatatatatggcaccttatatttatcttttaaaaaatataaatagaacattgctc 19692194  T
Q  492 tttt 495  Q
    ||||    
T  19692195 tttt 19692198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 493
Target Start/End: Complemental strand, 36903022 - 36902924
Alignment:
Q  395 tcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctt 493  Q
    ||||||||||| || || ||||||||| |||| | ||||  ||| ||||| |  |  |||||||||||| |||||||||||||||||||| ||||||||    
T  36903022 tcctcatgtatacagtactgattttcacctttaggtgtacaacatatatacgacatcttgtatttatctattaaaaaatttaaatagaacattgttctt 36902924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 208
Target Start/End: Complemental strand, 36903695 - 36903588
Alignment:
Q  100 ggccggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaataat-ataggccggtaatactactaagtactac 198  Q
    ||||||| ||||||||  |||| ||| ||||| || ||||||||| |||||||||  | |||||||  ||| |||| || ||| ||||||||||||||||    
T  36903695 ggccggatcttggggt--gcaaagagctcaattgagctgggcctctccaaggtataagtctaaaaataaattatagtccagtagtactactaagtactac 36903598  T
Q  199 cctactaaaa 208  Q
    ||||||||||    
T  36903597 cctactaaaa 36903588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 392 - 484
Target Start/End: Complemental strand, 12596388 - 12596296
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 484  Q
    ||||||||||| || |  |||| ||||||| || ||| |||| |||| ||||| || || |||||||||||||| ||||||| ||||||||||    
T  12596388 ggttcctcatgcatacggtagtcattttcacctctgggtgtaccacatatatacggcaccttgtatttatctttaaaaaaatataaatagaac 12596296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 365
Target Start/End: Complemental strand, 23551220 - 23551175
Alignment:
Q  318 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  23551220 ttttaggcctatta--gaattaggtcctcttgcttttggtgttaggtg 23551175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 365
Target Start/End: Original strand, 25010386 - 25010431
Alignment:
Q  318 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  25010386 ttttaggcctatta--gaattaggtcctcttgcttttggtgttaggtg 25010431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 365
Target Start/End: Complemental strand, 38415025 - 38414980
Alignment:
Q  318 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  38415025 ttttaggcctatta--gaattaggtcctcttgcttttggtgttaggtg 38414980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 392 - 496
Target Start/End: Complemental strand, 48983945 - 48983841
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||||||||||| |  |||| ||||||| |||||| |||| | || ||||| |  || || ||||||||||||||||||| |||||||| | |||||     
T  48983945 ggttcctcatgtatacggtagttattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagatcattgttt 48983846  T
Q  492 ttttt 496  Q
    |||||    
T  48983845 ttttt 48983841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 452 - 495
Target Start/End: Complemental strand, 18776807 - 18776764
Alignment:
Q  452 ttgtatttatcttttaaaaaatttaaatagaacgttgttctttt 495  Q
    |||||||||||||||||||||| |||||||||| ||| ||||||    
T  18776807 ttgtatttatcttttaaaaaatataaatagaacattgctctttt 18776764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 452 - 495
Target Start/End: Original strand, 29077281 - 29077324
Alignment:
Q  452 ttgtatttatcttttaaaaaatttaaatagaacgttgttctttt 495  Q
    |||||||||||||||||||||| |||||||||| ||| ||||||    
T  29077281 ttgtatttatcttttaaaaaatataaatagaacattgctctttt 29077324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 19692047 - 19692090
Alignment:
Q  318 ttttaggcctattatagaattgggtcctcttgcttttggtgttagg 363  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||    
T  19692047 ttttaggcctatta--gaattaggtcctcttgcttttggtgttagg 19692090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 455 - 534
Target Start/End: Complemental strand, 23020522 - 23020443
Alignment:
Q  455 tatttatcttttaaaaaatttaaatagaacgttgttctttttnnnnnnntacgttgttattttattacgggcctcttttc 534  Q
    ||||||||||||||||||| |||||  ||||||||||||||        ||| || |||||||||||||| |||||||||    
T  23020522 tatttatcttttaaaaaatctaaatgaaacgttgttcttttaaaaaaaatacatttttattttattacggacctcttttc 23020443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 392 - 490
Target Start/End: Complemental strand, 24525786 - 24525688
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgtt 490  Q
    |||||||||||||| |  |||| |||||||  ||||| |||| | || ||| | || || || ||||||||||||||||||| |||||||||| |||||    
T  24525786 ggttcctcatgtatacggtagtcattttcacttttgggtgtaccgcatatacacggcaccttatatttatcttttaaaaaatataaatagaacattgtt 24525688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 484
Target Start/End: Original strand, 8239711 - 8239780
Alignment:
Q  415 attttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 484  Q
    |||||||  ||||| |||| |||| ||||| || ||||| ||||||| ||||||||||| ||||||||||    
T  8239711 attttcacatttgggtgtaccacatatatacggcacattatatttattttttaaaaaatataaatagaac 8239780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 200
Target Start/End: Complemental strand, 9022063 - 9021962
Alignment:
Q  100 ggccggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaataat-ataggccggtaatactactaagtactac 198  Q
    ||||| |||||||||| | |||  || ||| |||| ||||||||| || || |||||| |||||||| ||| |||| || ||| ||||||||||||||||    
T  9022063 ggccgaaccttggggtttacaaacagctcagtggagctgggcctcccccagttatgggtctaaaaaaaaattatagcccagtagtactactaagtactac 9021964  T
Q  199 cc 200  Q
    ||    
T  9021963 cc 9021962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 365
Target Start/End: Complemental strand, 24525822 - 24525789
Alignment:
Q  332 tagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||| ||||||||||||||||||||||||||    
T  24525822 tagaattaggtcctcttgcttttggtgttaggtg 24525789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 361
Target Start/End: Original strand, 8239638 - 8239679
Alignment:
Q  318 ttttaggcctattatagaattgggtcctcttgcttttggtgtta 361  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||    
T  8239638 ttttaggcctatta--gaattaggtcctcttgcttttggtgtta 8239679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 392 - 484
Target Start/End: Original strand, 10955485 - 10955577
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 484  Q
    |||||||||||||| |  |||| ||||||| || ||  |||| | || ||||| || || || ||||||||||||||||||| ||||||||||    
T  10955485 ggttcctcatgtatacggtagtcattttcacctctgagtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaac 10955577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 365
Target Start/End: Complemental strand, 20091430 - 20091385
Alignment:
Q  318 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||||  ||||| ||||||||| ||||||||||||||||    
T  20091430 ttttaggcctatta--gaattaggtcctcttacttttggtgttaggtg 20091385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 392 - 472
Target Start/End: Complemental strand, 23551172 - 23551092
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaa 472  Q
    |||||||||||||| |  |||| ||||||| ||||||||||| | || ||||| |  || || ||||||||||||||||||    
T  23551172 ggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacgacaccttatatttatcttttaaaaaa 23551092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 365
Target Start/End: Complemental strand, 47985119 - 47985074
Alignment:
Q  318 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||||  ||||| ||||||||||||||| ||||||||||    
T  47985119 ttttaggcctatta--gaattaggtcctcttgctttttgtgttaggtg 47985074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 163; Significance: 8e-87; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 117 - 495
Target Start/End: Complemental strand, 2025019 - 2024638
Alignment:
Q  117 tgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaataatataggccggtaatactactaagtactaccctactaaaaacaaaatt 216  Q
    ||||||||| ||||| |||||| ||||| |||||||||||| |||||||| | ||||| || ||| |||||||||||||||||| ||||||||||||| |    
T  2025019 tgcaaggagctcaatagaactgcgcctccccaaggtatgggtctaaaaaaaattatagcccagtagtactactaagtactaccccactaaaaacaaaaat 2024920  T
Q  217 tcttt-------ttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcag 309  Q
    || ||       ||||||||||||||  |||||||||||||||||||||||| ||||||||       |||| |||||||||||||||||||||| |  |    
T  2024919 tccttattctctttctctctgataccgcgcgttccatcaccatcactccatctgactttccttttcttcttccccgatttgatttccttttcctcttatg 2024820  T
Q  310 ttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaa 409  Q
    |||||||||||||||| |||  |||||||| ||||||||||||||||||||||||||||        |||||| |||||||||| |||||||||||        
T  2024819 ttgtcttgttttaggcatat--tagaattgagtcctcttgcttttggtgttaggtgtgt--ttttttgggaggatggtttgaggatcctcatgtatatgg 2024724  T
Q  410 tagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttt 495  Q
    ||||||||||||||||||| ||||||||| ||||| || ||||||||||||||||| |||||||||||||||||| ||||||||||    
T  2024723 tagtgattttcatctttgggtgtatcacatatatacggcacattgtatttatctttaaaaaaatttaaatagaacattgttctttt 2024638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 100 - 495
Target Start/End: Complemental strand, 11242714 - 11242314
Alignment:
Q  100 ggccggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaataatataggccggtaatactactaagtactacc 199  Q
    |||||||||||| ||| ||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||  || ||| |||| ||||||||||||    
T  11242714 ggccggaccttgaggtgtgcaaggagttcaatggaacttggcctctccaaggtatgggcctaaaaaaaaatataacccagtagtactgctaagtactacc 11242615  T
Q  200 ctac--taaaaacaaaatttctt-----tttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgat 292  Q
    | ||  ||||||||||| |||||     ||||||||| |||||| ||||||||||| ||||||||||  |||||||||       |||| |||||| |||    
T  11242614 ccactataaaaacaaaaattctttattctttctctctcataccacgcgttccatcatcatcactccaatggactttccttttcttcttccccgattcgat 11242515  T
Q  293 ttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgag 392  Q
    |||||||||||| ||  |||| |||||||| ||||||  |||||||||||||||||||||||||||||||  | ||        ||||||||||||||||    
T  11242514 ttccttttcctcttctcttgttttgttttatgcctat--tagaattgggtcctcttgcttttggtgttagaggggtgtttttttgggagggtggtttgag 11242417  T
Q  393 gttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttct 492  Q
    ||||||||||||| |  ||||||||| ||||||||| ||||||||| |||||    |  ||||||||||||||||||||| ||||||||||| |||||||    
T  11242416 gttcctcatgtatacggtagtgatttccatctttggttgtatcacatatatacatcattttgtatttatcttttaaaaaaattaaatagaacattgttct 11242317  T
Q  493 ttt 495  Q
    |||    
T  11242316 ttt 11242314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 99 - 495
Target Start/End: Original strand, 34425609 - 34426007
Alignment:
Q  99 aggccggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaataat--ataggccggtaatactactaagtact 196  Q
    |||||| |||||||| | ||||| ||| ||||| |||||||| ||  |||||||||| |  | ||||| |||  |||| || ||| || |||||||||||    
T  34425609 aggccgaaccttggg-tgtgcaaagagctcaattgaactgggtcttcccaaggtatgagtttcaaaaaaaatttatagcccagtagtattactaagtact 34425707  T
Q  197 accctactaaaaacaaaatttctt------tttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttg 290  Q
    |||| ||||||||||||||| ||       ||||||| ||||||||  ||||||||| |||| |||||||| || ||| |       || | ||||||||    
T  34425708 accccactaaaaacaaaattcctcatcctctttctctttgataccacacgttccatcgccataactccatcagaattttctttt---ctgccccgatttg 34425804  T
Q  291 atttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttg 390  Q
    |||||||||| | | || |||||||||||||||||||||||  |||||| ||||||||||||||||||||||||| ||        ||||||||||||||    
T  34425805 atttcctttttcccttctgttgtcttgttttaggcctatta--gaattgagtcctcttgcttttggtgttaggtgagtgtttttttgggagggtggtttg 34425902  T
Q  391 aggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgtt 490  Q
    ||||||||||||||| |  || ||||||| |||||| | ||||||||| ||||| || || ||||||||||||||||||||||| ||||||||| |||||    
T  34425903 aggttcctcatgtatacggtaatgattttaatctttaggtgtatcacatatatacggcaccttgtatttatcttttaaaaaattgaaatagaacattgtt 34426002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 185 - 494
Target Start/End: Original strand, 2411882 - 2412191
Alignment:
Q  185 ctactaagtactaccctactaaaaacaaa-att--tctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttc 281  Q
    |||||||||||||||| |||||||| ||  |||  ||| ||||||| |||||||| | |||||||||||||||||||||| ||||||||       ||||    
T  2411882 ctactaagtactaccccactaaaaaaaatcattattctctttctctttgataccacgtgttccatcaccatcactccatcagactttccttttcttcttc 2411981  T
Q  282 tccgatttgatttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgt-gtannnnnnnggga 380  Q
     || ||||||||||||||||||| |  |||||||||||||||||||||||  |||||| |  ||||| |||||||||||||| |  ||        ||||    
T  2411982 cccaatttgatttccttttcctcttatgttgtcttgttttaggcctatta--gaattgagcactcttacttttggtgttaggcgacgt--tttttaggga 2412077  T
Q  381 gggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaata 480  Q
    ||||||||||||||||||||||||| || ||||||||||||  |||||||| ||| || ||||| |  || |||||||||| ||||||||||||||||||    
T  2412078 gggtggtttgaggttcctcatgtatacagtagtgattttcacatttggatgcatcgcatatatacgacactttgtatttattttttaaaaaatttaaata 2412177  T
Q  481 gaacgttgttcttt 494  Q
    |||| |||||||||    
T  2412178 gaacattgttcttt 2412191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 278 - 494
Target Start/End: Complemental strand, 14318595 - 14318382
Alignment:
Q  278 cttctccgatttgatttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnng 377  Q
    ||||||||||||||||||||||||||| |  || || ||||||||||||||||| |  | |||||||||||||||||||| ||||||| ||        |    
T  14318595 cttctccgatttgatttccttttcctcttttgtagttttgttttaggcctattaaa--actgggtcctcttgcttttggtcttaggtgggtgtttttttg 14318498  T
Q  378 ggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaa 477  Q
    | |||||||||||||||||||||||||| |  ||||||||||||| ||||||||||||||| ||||| |  || ||||||||||||||||||||||||||    
T  14318497 g-agggtggtttgaggttcctcatgtatacggtagtgattttcatttttggatgtatcacatatatacgacaccttgtatttatcttttaaaaaatttaa 14318399  T
Q  478 atagaacgttgttcttt 494  Q
    ||||||| |||||||||    
T  14318398 atagaacattgttcttt 14318382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 103 - 494
Target Start/End: Original strand, 10543392 - 10543776
Alignment:
Q  103 cggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaataa--tataggccggtaatactactaagtactaccc 200  Q
    ||||| || |||| ||||||||| ||||| |||  |||||||  ||||||||| || | ||||||||  ||||| |  ||| ||||||||| ||||||||    
T  10543392 cggactttagggtgtgcaaggagctcaatagaatcgggcctcctcaaggtatgagcttcaaaaataaattatagcctagtagtactactaaatactaccc 10543491  T
Q  201 tactaaaaacaaaatt--tctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttcctt 298  Q
    ||||||||| ||| ||  ||| |||||||| ||||||||||||||||||| ||||||||| |||||||||||       |||  ||||||||||||||||    
T  10543492 tactaaaaaaaaacttattctctttctctcggataccatgcgttccatcatcatcactccgtcggactttccttttattctttcccgatttgatttcctt 10543591  T
Q  299 ttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcct 398  Q
    |||||| |  |||||||| ||||||||||||  |||||| ||        |||||||||||| |||| ||        |||||||||||||||| |||||    
T  10543592 ttcctcttatgttgtcttattttaggcctat--tagaatcgg-------agcttttggtgttgggtgagt-gttttttgggagggtggtttgagattcct 10543681  T
Q  399 catgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttcttt 494  Q
     |||||| |  |||||||||||| ||||||||||||| || |||||    || || ||||||||||||||||||||||| | |||| || ||||||    
T  10543682 -atgtatacggtagtgattttcacctttggatgtatcgcatatatacatcaccttatatttatcttttaaaaaatttaagtggaacattattcttt 10543776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 216 - 495
Target Start/End: Complemental strand, 40794598 - 40794323
Alignment:
Q  216 ttctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcagttgtct 315  Q
    |||| ||||||| |||||||| ||||||||| ||||||| ||||||  |||||||       |||| | ||||||||||| |||||||| |  |||||||    
T  40794598 ttctctttctctttgataccacgcgttccattaccatcattccatcaaactttccttttcttcttcccggatttgatttctttttcctcttttgttgtct 40794499  T
Q  316 tgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaatagtga 415  Q
    |||||||||| |||||  ||||||||||||||| ||||||||||||||| || |          |||||||||||||||| ||||||||| |  ||||||    
T  40794498 tgttttaggcttatta--gaattgggtcctcttacttttggtgttaggt-tg-atgttttttttagggtggtttgaggtttctcatgtatacggtagtga 40794403  T
Q  416 ttttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttt 495  Q
    |||||| |||| | ||||||| | || || ||  | |||||||| |||||||||||||||||||| ||| ||||||||||    
T  40794402 ttttcaccttttggtgtatcatatatttacggctctttgtatttgtcttttaaaaaatttaaataaaacattgttctttt 40794323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 100 - 304
Target Start/End: Original strand, 15639160 - 15639369
Alignment:
Q  100 ggccggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaataa--tataggccggtaatactactaagtacta 197  Q
    ||||| |||||| ||| ||||||||| |||||||||||||  ||| ||||||||||||||||||||| ||  ||||| || ||| |||||||||||||||    
T  15639160 ggccgtaccttgaggtgtgcaaggagctcaatggaactggagctccccaaggtatgggcctaaaaaaaaaattatagtccagtagtactactaagtacta 15639259  T
Q  198 ccctactaaaaacaaaa---tttctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgattt 294  Q
    ||| |||||||| |  |    |||| ||||||||||||||||  |||||||||||||||||||  ||| | |||||       |||| ||||||||||||    
T  15639260 ccccactaaaaaaattacttattctctttctctctgataccacacgttccatcaccatcactctgtcgaattttccctttcttcttccccgatttgattt 15639359  T
Q  295 ccttttcctc 304  Q
    ||||||||||    
T  15639360 ccttttcctc 15639369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 379 - 534
Target Start/End: Complemental strand, 2531009 - 2530855
Alignment:
Q  379 gagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaa 478  Q
    ||||||||||||||||||||||||||| || |||||||||||| ||||||||||| |  | ||||| |  |||||||||||||||||||||||| |||||    
T  2531009 gagggtggtttgaggttcctcatgtatacagtagtgattttcacctttggatgtaccgtatatatacgacacattgtatttatcttttaaaaaacttaaa 2530910  T
Q  479 tagaacgttgttctttttnnnnnnntacgttgttattttattacgggcctcttttc 534  Q
    |||||| || |||||||        ||| || ||||||||||||||||||||||||    
T  2530909 tagaacatt-ttcttttaagaaaaatacatttttattttattacgggcctcttttc 2530855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 377 - 495
Target Start/End: Complemental strand, 36868990 - 36868872
Alignment:
Q  377 gggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaattta 476  Q
    |||||||||||||||| |||||||||||| |  ||||||||||||  ||||| |||| |||| ||||| |  || ||||||||||||||||||||| |||    
T  36868990 gggagggtggtttgagattcctcatgtatacggtagtgattttcacatttgggtgtaccacatatatacgacaccttgtatttatcttttaaaaaaatta 36868891  T
Q  477 aatagaacgttgttctttt 495  Q
    |||||||| ||||||||||    
T  36868890 aatagaacattgttctttt 36868872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 382 - 493
Target Start/End: Complemental strand, 22648845 - 22648734
Alignment:
Q  382 ggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatag 481  Q
    |||||||||||||| || || ||| || |||||||| ||| ||||||||||  |||| ||||| |  |||||||||||||||||||||||||||||||||    
T  22648845 ggtggtttgaggtttcttatttatacagtagtgattgtcacctttggatgtgccacatatatacgacacattgtatttatcttttaaaaaatttaaatag 22648746  T
Q  482 aacgttgttctt 493  Q
    ||| ||||||||    
T  22648745 aacattgttctt 22648734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 333 - 495
Target Start/End: Original strand, 33037721 - 33037884
Alignment:
Q  333 agaattgggtcctcttgcttttggtgttaggt--gtgtannnnnnngggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggat 430  Q
    ||||||||||||||||||||||||||||||||  ||||        || | |||||||||||||||||||||||| |  || || |||||| |||||| |    
T  33037721 agaattgggtcctcttgcttttggtgttaggtaggtgtttttttttgg-atggtggtttgaggttcctcatgtatacggtaatggttttcacctttgggt 33037819  T
Q  431 gtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttt 495  Q
    |||  ||| ||||| | ||  ||||||||||||||||||||||||||||| ||| ||||||||||    
T  33037820 gtacaacatatatacgatatcttgtatttatcttttaaaaaatttaaataaaacattgttctttt 33037884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 216 - 303
Target Start/End: Complemental strand, 34307407 - 34307320
Alignment:
Q  216 ttctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcct 303  Q
    |||| ||||||||||||||||   |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||    
T  34307407 ttctctttctctctgataccacatgttccatcaccatcactccatcggactttccttttcttcttctccgatttgatttccttttcct 34307320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 313 - 472
Target Start/End: Original strand, 15639570 - 15639724
Alignment:
Q  313 tcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaatag 412  Q
    |||||||||||||||||||  ||||||||||||||| |||||||||||||||| ||           || ||||||| |||||||| |||||| | | ||    
T  15639570 tcttgttttaggcctatta--gaattgggtcctcttacttttggtgttaggtgagtgttttttt---agagtggtttaaggttccttatgtatacgacag 15639664  T
Q  413 tgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaa 472  Q
    ||||||||||||||||||||||| || ||||| |  || |||||||||||||| ||||||    
T  15639665 tgattttcatctttggatgtatcgcatatatacgtcaccttgtatttatctttaaaaaaa 15639724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 216 - 331
Target Start/End: Complemental strand, 26719169 - 26719054
Alignment:
Q  216 ttctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcagttgtct 315  Q
    |||| |||||||||||||||| ||||||||||||||||||| ||||| |||||||       |||  | ||||||||||| |||||||| || ||||| |    
T  26719169 ttctctttctctctgataccacgcgttccatcaccatcactgcatcgaactttccttttcttctttcctgatttgatttcattttcctcttctgttgttt 26719070  T
Q  316 tgttttaggcctatta 331  Q
     |||||||||||||||    
T  26719069 agttttaggcctatta 26719054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 216 - 331
Target Start/End: Complemental strand, 26988913 - 26988798
Alignment:
Q  216 ttctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcagttgtct 315  Q
    |||| |||||||||||||||| ||||||||||||||||||| ||||| |||||||       |||  | ||||||||||| |||||||| || ||||| |    
T  26988913 ttctctttctctctgataccacgcgttccatcaccatcactgcatcgaactttccttttcttctttcctgatttgatttcattttcctcttctgttgttt 26988814  T
Q  316 tgttttaggcctatta 331  Q
     |||||||||||||||    
T  26988813 agttttaggcctatta 26988798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 377 - 533
Target Start/End: Complemental strand, 1366640 - 1366484
Alignment:
Q  377 gggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaattta 476  Q
    ||||||||||| ||||||||||||| ||| |  ||||||||||||  ||| | |||||| || |||||    |  ||||||||||||| |||||||||||    
T  1366640 gggagggtggtatgaggttcctcatatatacggtagtgattttcacatttaggtgtatcgcatatataccacatcttgtatttatcttataaaaaattta 1366541  T
Q  477 aatagaacgttgttctttttnnnnnnntacgttgttattttattacgggcctctttt 533  Q
    |||||||| ||||||||||        |||||| ||||||| |||||| ||||||||    
T  1366540 aatagaacattgttcttttaaaaaaaatacgtttttatttttttacggacctctttt 1366484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 309 - 495
Target Start/End: Original strand, 10407378 - 10407565
Alignment:
Q  309 gttgtcttgttttaggcctattatagaattgggtcctcttgct---tttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtat 405  Q
    |||||||||||||||||||||||  ||||||||||||||||||   ||||||||||| ||  |        |||| ||||||| ||| ||||||||| ||    
T  10407378 gttgtcttgttttaggcctatta--gaattgggtcctcttgctccttttggtgttagatgaatgtttttttgggatggtggttggagattcctcatgcat 10407475  T
Q  406 tcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttt 495  Q
     |  |||| |||||||  ||| ||||||  ||| || || |  || |||| |||||||||||||||||||||||||||| ||||||||||    
T  10407476 acggtagtaattttcacttttagatgtacaacatatgtacgacaccttgtgtttatcttttaaaaaatttaaatagaacattgttctttt 10407565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 27079012 - 27079115
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||||||||||| || |||| ||||||| |||| | |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||| ||    
T  27079012 ggttcctcatgtatacagtagtcattttcacctttaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 27079111  T
Q  492 tttt 495  Q
    ||||    
T  27079112 tttt 27079115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 241 - 355
Target Start/End: Original strand, 24395590 - 24395702
Alignment:
Q  241 ttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcagttgtcttgttttaggcctattatagaattgg 340  Q
    ||||||||||||||||||||| ||||||||       |||| |||||||||||||||||||||| |  |||| |||||||||  |||||  ||||||||     
T  24395590 ttccatcaccatcactccatcagactttccttttcttcttccccgatttgatttccttttcctcttatgttgccttgttttatacctat--tagaattga 24395687  T
Q  341 gtcctcttgcttttg 355  Q
    ||| |||||||||||    
T  24395688 gtcatcttgcttttg 24395702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 26719045 - 26718906
Alignment:
Q  395 tcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttcttt 494  Q
    ||||||||||| |  |||||||||||| |||||  |||||| || ||||| |  || |||||||||||||||||||| |||||||||||| || ||||||    
T  26719045 tcctcatgtatgcggtagtgattttcacctttgagtgtatcgcatatatacgacactttgtatttatcttttaaaaattttaaatagaacattattcttt 26718946  T
Q  495 ttnnnnnnntacgttgttattttattacgggcctcttttc 534  Q
             |||||| ||||||||||||||| ||||||||    
T  26718945 aaaaaaaaatacgtttttattttattacgggtctcttttc 26718906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 26988789 - 26988650
Alignment:
Q  395 tcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttcttt 494  Q
    ||||||||||| |  |||||||||||| |||||  |||||| || ||||| |  || |||||||||||||||||||| |||||||||||| || ||||||    
T  26988789 tcctcatgtatgcggtagtgattttcacctttgagtgtatcgcatatatacgacactttgtatttatcttttaaaaattttaaatagaacattattcttt 26988690  T
Q  495 ttnnnnnnntacgttgttattttattacgggcctcttttc 534  Q
             |||||| ||||||||||||||| ||||||||    
T  26988689 aaaaaaaaatacgtttttattttattacgggtctcttttc 26988650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 452 - 495
Target Start/End: Original strand, 606215 - 606258
Alignment:
Q  452 ttgtatttatcttttaaaaaatttaaatagaacgttgttctttt 495  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  606215 ttgtatttatcttttaaaaaatttaaatagaacattgttctttt 606258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 30854330 - 30854433
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||||||||||| | ||||| ||||||| || ||  |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||| ||    
T  30854330 ggttcctcatgtatacgatagtcattttcacctctgagtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 30854429  T
Q  492 tttt 495  Q
    ||||    
T  30854430 tttt 30854433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 34756465 - 34756362
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||||||||||| |  |||| ||||||| || ||| |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||| ||    
T  34756465 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 34756366  T
Q  492 tttt 495  Q
    ||||    
T  34756365 tttt 34756362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 379 - 484
Target Start/End: Original strand, 24395727 - 24395832
Alignment:
Q  379 gagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaa 478  Q
    ||||||||||| | ||||||||| ||| |  | |||||||||| ||||||||||||   | |||||    || |||||||||||||||||||||||||||    
T  24395727 gagggtggtttaaagttcctcatctatacggtggtgattttcacctttggatgtattgtatatatacaacaccttgtatttatcttttaaaaaatttaaa 24395826  T
Q  479 tagaac 484  Q
    ||||||    
T  24395827 tagaac 24395832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 392 - 484
Target Start/End: Original strand, 9364292 - 9364384
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 484  Q
    |||||||||||||| |  |||| ||||||| |||||| |||| | || ||||| || || || ||||||||||||||||||| ||||||||||    
T  9364292 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaac 9364384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 392 - 484
Target Start/End: Complemental strand, 16198893 - 16198801
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 484  Q
    |||||||||||||| |  |||| ||||||| |||||| |||||| || ||||| |  || || ||||||||||||||||||| ||||||||||    
T  16198893 ggttcctcatgtatacggtagtcattttcacctttgggtgtatcgcatatatacgacaccttatatttatcttttaaaaaatataaatagaac 16198801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 452 - 496
Target Start/End: Original strand, 27530544 - 27530588
Alignment:
Q  452 ttgtatttatcttttaaaaaatttaaatagaacgttgttcttttt 496  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||    
T  27530544 ttgtattaatcttttaaaaaatttaaatagaacattgttcttttt 27530588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 28822441 - 28822338
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    ||||| |||||||| |  |||| ||||||| |||||| |||| | || ||||| || || || ||||||||||||||||||| |||||||||| ||| ||    
T  28822441 ggttcatcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctc 28822342  T
Q  492 tttt 495  Q
    ||||    
T  28822341 tttt 28822338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 365
Target Start/End: Original strand, 7670877 - 7670922
Alignment:
Q  318 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  7670877 ttttaggcctatta--gaattaggtcctcttgcttttggtgttaggtg 7670922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 365
Target Start/End: Complemental strand, 16198941 - 16198896
Alignment:
Q  318 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  16198941 ttttaggcctatta--gaattaggtcctcttgcttttggtgttaggtg 16198896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 392 - 484
Target Start/End: Original strand, 19523200 - 19523292
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 484  Q
    ||||||||||||||    |||| ||||||| || ||| |||| | || ||||| || || |||||||||||||||||||||| ||||||||||    
T  19523200 ggttcctcatgtatatggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 19523292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 481
Target Start/End: Original strand, 27924084 - 27924172
Alignment:
Q  393 gttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatag 481  Q
    ||||||||||||| |  |||| ||||| | ||||||||||| | || ||||| || || || ||||||||||||||||||| |||||||    
T  27924084 gttcctcatgtatacggtagtcatttttacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatag 27924172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 365
Target Start/End: Complemental strand, 28822489 - 28822444
Alignment:
Q  318 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  28822489 ttttaggcctatta--gaattaggtcctcttgcttttggtgttaggtg 28822444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 495
Target Start/End: Complemental strand, 31881510 - 31881430
Alignment:
Q  415 attttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttt 495  Q
    |||||||||| |||||||  | || ||||| || ||  ||||||||||||||||||||| |||||||||| ||| ||||||    
T  31881510 attttcatctctggatgttccgcatatatacggcaccgtgtatttatcttttaaaaaatataaatagaacattgctctttt 31881430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 495
Target Start/End: Complemental strand, 35080806 - 35080766
Alignment:
Q  455 tatttatcttttaaaaaatttaaatagaacgttgttctttt 495  Q
    |||||||||||||||||||||||||| ||| ||||||||||    
T  35080806 tatttatcttttaaaaaatttaaataaaacattgttctttt 35080766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 365
Target Start/End: Complemental strand, 38869510 - 38869465
Alignment:
Q  318 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  38869510 ttttaggcctatta--gaattaggtcctcttgcttttggtgttaggtg 38869465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 452 - 483
Target Start/End: Original strand, 22875003 - 22875034
Alignment:
Q  452 ttgtatttatcttttaaaaaatttaaatagaa 483  Q
    ||||||||||||||||||||||||||||||||    
T  22875003 ttgtatttatcttttaaaaaatttaaatagaa 22875034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 23284161 - 23284058
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||||||||||| |  |||| |||||||||||||| |||| | || ||||| |  || |||||||||   |||||||||| |||||||||| ||| ||    
T  23284161 ggttcctcatgtatacggtagtcattttcatctttgggtgtaccgcatatatacgacaccttgtatttagtctttaaaaaatataaatagaacattgctc 23284062  T
Q  492 tttt 495  Q
    ||||    
T  23284061 tttt 23284058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 452 - 495
Target Start/End: Complemental strand, 31194651 - 31194608
Alignment:
Q  452 ttgtatttatcttttaaaaaatttaaatagaacgttgttctttt 495  Q
    |||||||||||||||||||||| |||||||||| ||| ||||||    
T  31194651 ttgtatttatcttttaaaaaatataaatagaacattgctctttt 31194608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 38869462 - 38869359
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||| ||||||||| |  |||| ||||||| |||||| |||| | || ||||| |  || || ||||||||||||||||||| |||||||||| ||| ||    
T  38869462 ggtttctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagaacattgctc 38869363  T
Q  492 tttt 495  Q
    ||||    
T  38869362 tttt 38869359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 452 - 494
Target Start/End: Original strand, 7338060 - 7338102
Alignment:
Q  452 ttgtatttatcttttaaaaaatttaaatagaacgttgttcttt 494  Q
    |||||||||||||||||||||| |||||||||| ||| |||||    
T  7338060 ttgtatttatcttttaaaaaatataaatagaacattgctcttt 7338102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 390 - 484
Target Start/End: Complemental strand, 36187980 - 36187886
Alignment:
Q  390 gaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 484  Q
    |||||| ||||||||| |  |||| ||||||| || ||| |||| | || ||||| || || |||||||||| ||||||||||| ||||||||||    
T  36187980 gaggtttctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatattttaaaaaatataaatagaac 36187886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 40389617 - 40389543
Alignment:
Q  410 tagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 484  Q
    |||| ||||||| ||||||||||| | || ||||| |  || || ||||||||||||||||||| ||||||||||    
T  40389617 tagtcattttcacctttggatgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagaac 40389543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 452 - 484
Target Start/End: Original strand, 2274951 - 2274983
Alignment:
Q  452 ttgtatttatcttttaaaaaatttaaatagaac 484  Q
    |||||||||||||||||||||| ||||||||||    
T  2274951 ttgtatttatcttttaaaaaatataaatagaac 2274983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 364
Target Start/End: Original strand, 7079552 - 7079605
Alignment:
Q  309 gttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggt 364  Q
    ||||||||||||||| |||||||  ||||| |||| ||||||||||| ||||||||    
T  7079552 gttgtcttgttttagacctatta--gaattaggtcatcttgcttttgatgttaggt 7079605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 452 - 484
Target Start/End: Complemental strand, 15480128 - 15480096
Alignment:
Q  452 ttgtatttatcttttaaaaaatttaaatagaac 484  Q
    |||||||||||||||||||||| ||||||||||    
T  15480128 ttgtatttatcttttaaaaaatataaatagaac 15480096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 392 - 484
Target Start/End: Complemental strand, 16799426 - 16799334
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 484  Q
    |||||||||||||| |  || | ||||||| |||||| |||| | || ||||| || || || ||||||| ||||||||||| ||||||||||    
T  16799426 ggttcctcatgtatacggtaatcattttcacctttgggtgtaccgcatatatacggcaccttatatttattttttaaaaaatataaatagaac 16799334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 165
Target Start/End: Complemental strand, 34307484 - 34307416
Alignment:
Q  97 caaggccggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaa 165  Q
    |||||||||||||||||||  ||||| || |||||||||| || ||||  | |||||||||||| ||||    
T  34307484 caaggccggaccttggggtgcgcaagaagctcaatggaaccggacctcctcgaggtatgggcctcaaaa 34307416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 365
Target Start/End: Complemental strand, 40389683 - 40389638
Alignment:
Q  318 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||||  ||||| ||||||||||||||| ||||||||||    
T  40389683 ttttaggcctatta--gaattaggtcctcttgcttttagtgttaggtg 40389638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 155; Significance: 5e-82; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 100 - 495
Target Start/End: Complemental strand, 39135125 - 39134720
Alignment:
Q  100 ggccggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaataa---tataggccggtaatactactaagtact 196  Q
    ||||| |||||||||| ||||| ||| |||||||||||||||||| ||||||||||||||| ||||| ||   ||||| || ||| ||||||||||||||    
T  39135125 ggccgaaccttggggtgtgcaaagagctcaatggaactgggcctccccaaggtatgggcctcaaaaacaaaattatagcccagtagtactactaagtact 39135026  T
Q  197 accctactaaaaacaaa---atttcttt-----ttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatt 288  Q
    |||| | |||||| |||   ||||| ||     |||||||||||||||||||||||||||||||||||||||| || |||||       |||| ||||||    
T  39135025 accccagtaaaaaaaaacaaatttccttattctttctctctgataccatgcgttccatcaccatcactccatcagattttccttttcttcttccccgatt 39134926  T
Q  289 tgatttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtt 388  Q
    |||||| ||||||||| || |||||||||||||| ||||||  |||||||||||||||||||||||||||||||||| ||        ||||||||||||    
T  39134925 tgattttcttttcctcttctgttgtcttgttttaagcctat--tagaattgggtcctcttgcttttggtgttaggtgggtgtttttttgggagggtggtt 39134828  T
Q  389 tgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatc-ttttaaaaaatttaaatagaacgtt 487  Q
    ||||||||||||||||| || |||||||| ||| |||||| |||||  || |||||  | || ||||||||||| |||||||||||||||||||||| ||    
T  39134827 tgaggttcctcatgtatacagtagtgattatcacctttgggtgtattgcatatatacagcaccttgtatttatctttttaaaaaatttaaatagaacatt 39134728  T
Q  488 gttctttt 495  Q
    ||||||||    
T  39134727 gttctttt 39134720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 216 - 495
Target Start/End: Complemental strand, 10926219 - 10925951
Alignment:
Q  216 ttctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcagttgtct 315  Q
    |||| |||||||||| |||||||||||||||||||||||||||||| ||||||||       ||||||||||||||||||||||||||| || |||||||    
T  10926219 ttctctttctctctggtaccatgcgttccatcaccatcactccatcagactttccttttcttcttctccgatttgatttccttttcctcttctgttgtct 10926120  T
Q  316 tgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaatagtga 415  Q
    ||||       |||  ||||| ||| | |||||||||||||||||||||| ||           |||||| ||||||| ||||||||||| |  ||||||    
T  10926119 tgtt-------tat--tagaactggattctcttgcttttggtgttaggtgagtgttttttt---agggtgatttgaggatcctcatgtatacggtagtga 10926032  T
Q  416 ttttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaa-atttaaatagaacgttgttctttt 495  Q
    |||||||||||||||| ||| || ||||| || ||||||||||||| ||||||||| | ||||||||||  ||||||||||    
T  10926031 ttttcatctttggatgcatctcatatatacggcacattgtatttattttttaaaaatacttaaatagaatattgttctttt 10925951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 188 - 494
Target Start/End: Original strand, 26803758 - 26804059
Alignment:
Q  188 ctaagtactaccctactaaaaacaaaat-ttctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccga 286  Q
    ||||||||||||| ||||||||   | | |||| ||||||||| |||||  | |||||||||||||||||||||| |||||| |       |||  ||||    
T  26803758 ctaagtactaccccactaaaaaatcattattctctttctctctaataccgcgtgttccatcaccatcactccatcagacttttcttttcttctttcccga 26803857  T
Q  287 tttgatttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtgg 386  Q
    ||||||||| |||||||| || ||||||||||||||| |||||  |||||||| ||  ||||||||||||||||||||| ||        ||||||||||    
T  26803858 tttgatttctttttcctcttctgttgtcttgttttagtcctat--tagaattgagttatcttgcttttggtgttaggtgagt-gttttttgggagggtgg 26803954  T
Q  387 tttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgt 486  Q
    ||||||||| ||||||||| |  |||||||||||| |||    |||||| || ||||| |  |  ||||||||||||||||||||||||||||| | | |    
T  26803955 tttgaggtttctcatgtatacggtagtgattttcacctt---gtgtatcgcatatatacgacatcttgtatttatcttttaaaaaatttaaatatagcat 26804051  T
Q  487 tgttcttt 494  Q
    ||||||||    
T  26804052 tgttcttt 26804059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 320 - 494
Target Start/End: Complemental strand, 38547207 - 38547035
Alignment:
Q  320 ttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaatagtgatttt 419  Q
    ||||||||||||  ||||| ||||||||| ||||| |||||||||| ||        |||||||||||||||||||||||||||||   |||||||||||    
T  38547207 ttaggcctatta--gaatttggtcctcttacttttagtgttaggtgggtgtttttttgggagggtggtttgaggttcctcatgtatatgatagtgatttt 38547110  T
Q  420 catctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttcttt 494  Q
    ||  ||||| |||| |||| ||||| || || ||||||||||||||||||||||||||||||||| ||| |||||    
T  38547109 cacatttgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacattgatcttt 38547035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 377 - 495
Target Start/End: Original strand, 45758491 - 45758609
Alignment:
Q  377 gggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaattta 476  Q
    |||| |||||||||||||||||||||||| |  |||||||||||| |||||||||||| ||| |||||    || ||| |||||||||||||||||||||    
T  45758491 gggatggtggtttgaggttcctcatgtatacggtagtgattttcacctttggatgtataacatatatacaacaccttgcatttatcttttaaaaaattta 45758590  T
Q  477 aatagaacgttgttctttt 495  Q
    |||||||| ||||||||||    
T  45758591 aatagaacattgttctttt 45758609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 380 - 494
Target Start/End: Original strand, 6221678 - 6221791
Alignment:
Q  380 agggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaat 479  Q
    |||||||||||||||||||||| ||| | ||| |||||||||  ||| |||||| | |  ||||| || |||||||||||||||||| ||||||||||||    
T  6221678 agggtggtttgaggttcctcatatatacgataatgattttcacattttgatgtaccgcttatatacggcacattgtatttatctttt-aaaaatttaaat 6221776  T
Q  480 agaacgttgttcttt 494  Q
    ||||| |||||||||    
T  6221777 agaacattgttcttt 6221791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 495
Target Start/End: Original strand, 5533242 - 5533428
Alignment:
Q  309 gttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnn-gggagggtggtttgaggttcctcatgtattc 407  Q
    |||||||||||||| ||||||||  ||||||| |||||||||||||| ||||||||| |          |||| ||||||||||| |||||||||||| |    
T  5533242 gttgtcttgttttacgcctatta--gaattggatcctcttgcttttgatgttaggtgggagttttttttgggatggtggtttgagtttcctcatgtatac 5533339  T
Q  408 aatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatctttt-aaaaaatttaaatagaacgttgttctttt 495  Q
      |||||||||||| |||||  ||||   || ||||| || || |||| |||||||||| |||||||||||||||||  ||||||||||    
T  5533340 ggtagtgattttcacctttgattgtacatcatatatacggcaccttgtgtttatcttttaaaaaaatttaaatagaatattgttctttt 5533428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 384 - 495
Target Start/End: Original strand, 38853527 - 38853637
Alignment:
Q  384 tggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaa 483  Q
    ||||||||||||| |||||||| |  |||||||||||| |||||||| ||  ||| ||||| |  || ||||||||||| ||||||||||||||||||||    
T  38853527 tggtttgaggttc-tcatgtatacggtagtgattttcacctttggatatacaacatatatacgacaccttgtatttatcatttaaaaaatttaaatagaa 38853625  T
Q  484 cgttgttctttt 495  Q
    |  |||||||||    
T  38853626 cactgttctttt 38853637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 310 - 494
Target Start/End: Complemental strand, 43235951 - 43235767
Alignment:
Q  310 ttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaa 409  Q
    |||| |||| ||||||||||||  |||||| ||||| ||||||||||||||||||   |        |||| |||||||||||||||||||||||| | |    
T  43235951 ttgttttgtattaggcctatta--gaattgagtcctattgcttttggtgttaggttgatgtttttttgggatggtggtttgaggttcctcatgtatacga 43235854  T
Q  410 tagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttt--taaaaaatttaaatagaacgttgttcttt 494  Q
    |||||||||||| |||||| ||||   || ||||| |  |  ||||||||||||||   |||||||||||||||||| || ||||||    
T  43235853 tagtgattttcacctttgggtgtacatcatatatacgacatcttgtatttatctttaaaaaaaaatttaaatagaacatttttcttt 43235767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 392 - 490
Target Start/End: Complemental strand, 9173124 - 9173026
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgtt 490  Q
    |||||||||||||| |  |||| ||||||| ||||||||||| | || ||||| || || || ||||||||||||||||||| |||||||||| |||||    
T  9173124 ggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgtt 9173026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 392 - 490
Target Start/End: Complemental strand, 9181106 - 9181008
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgtt 490  Q
    |||||||||||||| |  |||| ||||||| ||||||||||| | || ||||| || || || ||||||||||||||||||| |||||||||| |||||    
T  9181106 ggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgtt 9181008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 392 - 484
Target Start/End: Original strand, 14146312 - 14146404
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 484  Q
    |||||||||||||| |  |||| |||||||||| ||| |||| | || ||||| || || |||||||||||||||||||||| ||||||||||    
T  14146312 ggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 14146404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 5316692 - 5316795
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||||||||||| |  |||| ||||||| || ||| |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||| ||    
T  5316692 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 5316791  T
Q  492 tttt 495  Q
    ||||    
T  5316792 tttt 5316795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 23185439 - 23185542
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||||||||||| |  |||| ||||||| || ||| |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||| ||    
T  23185439 ggttcctcatgtatacggtagtcattttcacctatgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 23185538  T
Q  492 tttt 495  Q
    ||||    
T  23185539 tttt 23185542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 392 - 494
Target Start/End: Complemental strand, 4971719 - 4971617
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||||||||||| |  |||| |||||||  | ||| |||| | || ||||| ||||| |||||||||||||||||||||| |||||||||| ||| ||    
T  4971719 ggttcctcatgtatacggtagtcattttcacttatgggtgtaccgcatatatacggtaccttgtatttatcttttaaaaaatataaatagaacattgctc 4971620  T
Q  492 ttt 494  Q
    |||    
T  4971619 ttt 4971617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 392 - 493
Target Start/End: Complemental strand, 1366979 - 1366878
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||||| ||||| |  |||| |||||||||||||| |||| | || ||||| || || || ||||||||||||||||||| |||||||||| ||| ||    
T  1366979 ggttcctcgtgtatacggtagtcattttcatctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctc 1366880  T
Q  492 tt 493  Q
    ||    
T  1366879 tt 1366878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 390 - 495
Target Start/End: Original strand, 50881440 - 50881545
Alignment:
Q  390 gaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgt 489  Q
    |||||||||||||||| |  |||| ||||||| || | |||||| | || ||||| |  || |||||||||||||||||||||| |||||||||| |||     
T  50881440 gaggttcctcatgtatactgtagtcattttcacctctagatgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgc 50881539  T
Q  490 tctttt 495  Q
    ||||||    
T  50881540 tctttt 50881545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 415 - 495
Target Start/End: Original strand, 6889646 - 6889726
Alignment:
Q  415 attttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttt 495  Q
    ||||||| || |||||||| | || ||||| | ||| |||||||||||||||||||||| |||||||||| ||| ||||||    
T  6889646 attttcacctctggatgtaccgcatatatacgatactttgtatttatcttttaaaaaatataaatagaacattgctctttt 6889726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 415 - 495
Target Start/End: Original strand, 6891492 - 6891572
Alignment:
Q  415 attttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttt 495  Q
    ||||||| || |||||||| | || ||||| | ||| |||||||||||||||||||||| |||||||||| ||| ||||||    
T  6891492 attttcacctctggatgtaccgcatatatacgatactttgtatttatcttttaaaaaatataaatagaacattgctctttt 6891572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 448 - 495
Target Start/End: Complemental strand, 17322668 - 17322621
Alignment:
Q  448 tacattgtatttatcttttaaaaaatttaaatagaacgttgttctttt 495  Q
    |||||||||||||||||| ||||||| |||||||||| ||||||||||    
T  17322668 tacattgtatttatctttaaaaaaatataaatagaacattgttctttt 17322621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 390 - 484
Target Start/End: Original strand, 6771801 - 6771895
Alignment:
Q  390 gaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 484  Q
    |||||||||| ||||| |  |||| ||||||| || ||| |||| | || ||||| || || |||||||||||||||||||||| ||||||||||    
T  6771801 gaggttcctcgtgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 6771895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 482
Target Start/End: Original strand, 19955729 - 19955819
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaataga 482  Q
    |||||||||| ||| |  |||| ||||||| |||||| |||| | || ||||| ||||| || ||||||||||||||||||| ||||||||    
T  19955729 ggttcctcatatatacggtagtcattttcacctttgggtgtaccgcatatatacggtaccttatatttatcttttaaaaaatataaataga 19955819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 410 - 495
Target Start/End: Original strand, 5027579 - 5027664
Alignment:
Q  410 tagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttt 495  Q
    |||| ||||||| || ||| |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||| ||||||    
T  5027579 tagtcattttcacctatgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 5027664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 410 - 495
Target Start/End: Complemental strand, 21741020 - 21740935
Alignment:
Q  410 tagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttt 495  Q
    |||| ||||||| || ||| |||||| || ||||| || || ||||||||||||||||||||||  ||||||||| ||| ||||||    
T  21741020 tagtcattttcacctctgggtgtatcgcatatatacggcaccttgtatttatcttttaaaaaatacaaatagaacattgctctttt 21740935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 365
Target Start/End: Complemental strand, 9181154 - 9181109
Alignment:
Q  318 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  9181154 ttttaggcctatta--gaattaggtcctcttgcttttggtgttaggtg 9181109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 365
Target Start/End: Original strand, 19955681 - 19955726
Alignment:
Q  318 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  19955681 ttttaggcctatta--gaattaggtcctcttgcttttggtgttaggtg 19955726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 392 - 484
Target Start/End: Original strand, 27559649 - 27559741
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 484  Q
    |||||||||||||| |  |||| ||||||| |||||| |||| | || ||||| |  || || ||||||||||||||||||| ||||||||||    
T  27559649 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagaac 27559741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 392 - 484
Target Start/End: Complemental strand, 41697238 - 41697146
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 484  Q
    |||||||||||||| |  |||| |||||||  | ||||||||   || ||||| | ||| |||||||||||||||||||||| ||||||||||    
T  41697238 ggttcctcatgtatacggtagtcattttcacttctggatgtactgcatatatacgatactttgtatttatcttttaaaaaatataaatagaac 41697146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 365
Target Start/End: Original strand, 44895616 - 44895661
Alignment:
Q  318 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  44895616 ttttaggcctatta--gaattaggtcctcttgcttttggtgttaggtg 44895661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 391 - 495
Target Start/End: Original strand, 50146307 - 50146411
Alignment:
Q  391 aggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgtt 490  Q
    |||||||||||||||    || ||||||| | |||||| | ||||||| ||| | || || ||| |||||||||| ||||| |||||||||||| |||||    
T  50146307 aggttcctcatgtatagggtaatgatttttacctttgggtctatcacatatacacggcaccttgcatttatctttcaaaaagtttaaatagaacattgtt 50146406  T
Q  491 ctttt 495  Q
    |||||    
T  50146407 ctttt 50146411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 452 - 495
Target Start/End: Complemental strand, 22865502 - 22865459
Alignment:
Q  452 ttgtatttatcttttaaaaaatttaaatagaacgttgttctttt 495  Q
    |||||||||||||||||||||| |||||||||| ||| ||||||    
T  22865502 ttgtatttatcttttaaaaaatataaatagaacattgctctttt 22865459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 452 - 495
Target Start/End: Original strand, 44655813 - 44655856
Alignment:
Q  452 ttgtatttatcttttaaaaaatttaaatagaacgttgttctttt 495  Q
    |||||||||||||||||||||| |||||||||| ||| ||||||    
T  44655813 ttgtatttatcttttaaaaaatataaatagaacattgctctttt 44655856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 50146068 - 50146154
Alignment:
Q  127 tcaatggaactgggcctcaccaaggtatgggcctaaaaaataat-ataggccggtaatactactaagtactaccctactaaaaacaa 212  Q
    ||||||||  |||||||||| |||||||  |||||||||| ||| |||| || ||  |||||||||||||||||| ||||| |||||    
T  50146068 tcaatggagttgggcctcactaaggtatcagcctaaaaaaaaattatagcccagtggtactactaagtactaccccactaataacaa 50146154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 495
Target Start/End: Original strand, 35392300 - 35392384
Alignment:
Q  410 tagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttt 495  Q
    |||||||||||| |||||||| || | || ||||| || || |||||||||||  |||||||||||||||| ||| || |||||||    
T  35392300 tagtgattttcacctttggatataccgcatatatacggcaccttgtatttatc-cttaaaaaatttaaataaaacattattctttt 35392384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 365
Target Start/End: Complemental strand, 1367027 - 1366982
Alignment:
Q  318 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||||  ||||| |||| |||||||||||||||||||||    
T  1367027 ttttaggcctatta--gaattaggtcatcttgcttttggtgttaggtg 1366982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 452 - 484
Target Start/End: Original strand, 3406490 - 3406522
Alignment:
Q  452 ttgtatttatcttttaaaaaatttaaatagaac 484  Q
    |||||||||||||||||||||| ||||||||||    
T  3406490 ttgtatttatcttttaaaaaatataaatagaac 3406522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 452 - 484
Target Start/End: Complemental strand, 3440330 - 3440298
Alignment:
Q  452 ttgtatttatcttttaaaaaatttaaatagaac 484  Q
    |||||||||||||||||||||| ||||||||||    
T  3440330 ttgtatttatcttttaaaaaatataaatagaac 3440298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 365
Target Start/End: Complemental strand, 4971767 - 4971722
Alignment:
Q  318 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||||  ||||| | ||||||||||||||||||||||||    
T  4971767 ttttaggcctatta--gaattagttcctcttgcttttggtgttaggtg 4971722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 365
Target Start/End: Complemental strand, 9173172 - 9173127
Alignment:
Q  318 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||||  ||||| ||||||||| ||||||||||||||||    
T  9173172 ttttaggcctatta--gaattaggtcctcttacttttggtgttaggtg 9173127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 365
Target Start/End: Complemental strand, 13913631 - 13913586
Alignment:
Q  318 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||||  ||||| |||| |||||||||||||||||||||    
T  13913631 ttttaggcctatta--gaattaggtcatcttgcttttggtgttaggtg 13913586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 452 - 484
Target Start/End: Original strand, 16140127 - 16140159
Alignment:
Q  452 ttgtatttatcttttaaaaaatttaaatagaac 484  Q
    |||||||||||||||||||||| ||||||||||    
T  16140127 ttgtatttatcttttaaaaaatataaatagaac 16140159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 365
Target Start/End: Original strand, 23185391 - 23185436
Alignment:
Q  318 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||||  ||||| | ||||||||||||||||||||||||    
T  23185391 ttttaggcctatta--gaattagttcctcttgcttttggtgttaggtg 23185436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 143; Significance: 7e-75; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 97 - 495
Target Start/End: Complemental strand, 21666099 - 21665699
Alignment:
Q  97 caaggccggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaataatataggccggtaatactactaagtact 196  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||   |  |||||  | | | |||||||||| |||    
T  21666099 caaggccggaccttggggtgtgcaaggagctcaatggaactgggcctccccaaggtatgggcctaaatttttttatagctcagcagtactactaagcact 21666000  T
Q  197 accctactaaaaacaaaat-----ttctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttga 291  Q
    |||| |||||||| ||| |     |||| ||||||| |||||||| ||||||||||| |||||||||||| ||||||||       |||| || ||||||    
T  21665999 accccactaaaaa-aaattccttattctctttctctttgataccacgcgttccatcatcatcactccatcagactttccttttcttcttccccaatttga 21665901  T
Q  292 tttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttga 391  Q
    ||||||||||||| || |||||||||||||| | ||||  |||||||||||||||||||||| ||||||||||| ||         |||||||||||||     
T  21665900 tttccttttcctcatctgttgtcttgttttatgtctat--tagaattgggtcctcttgctttaggtgttaggtgggtgtttttttaggagggtggtttgt 21665803  T
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||||||||||| |  ||||||||||||  ||| ||||||||||| ||||| |  ||  |||||||||||||||||||||||||||||||| ||||||    
T  21665802 ggttcctcatgtatacggtagtgattttcacattttgatgtatcacatatatacgacaccgtgtatttatcttttaaaaaatttaaatagaacattgttc 21665703  T
Q  492 tttt 495  Q
    ||||    
T  21665702 tttt 21665699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 100 - 444
Target Start/End: Complemental strand, 11953009 - 11952656
Alignment:
Q  100 ggccggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaataa----tataggccggtaatactactaagtac 195  Q
    ||||| |||||||||| ||||||||| |||||||||||||||||| |||||||||| |||| ||||||||    ||||| || ||| |||||||||||||    
T  11953009 ggccgaaccttggggtgtgcaaggagctcaatggaactgggcctccccaaggtatgagcctcaaaaataaaatttatagccctgtagtactactaagtac 11952910  T
Q  196 taccctactaaaaacaaaatttcttt-------ttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatt 288  Q
    ||| | ||||||||||||| ||||||       ||||||||| ||||| |||||||||||||||||||||| ||| ||||||       |||| ||||||    
T  11952909 tactccactaaaaacaaaaattctttattctctttctctctggtaccacgcgttccatcaccatcactccaccgggctttccttttcttcttccccgatt 11952810  T
Q  289 tgatttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtt 388  Q
    |||||||||||||||| ||  ||||||||||||||||||||  |||||||| ||||||||| ||| ||||||||||| ||        ||||||||||||    
T  11952809 tgatttccttttcctcttccattgtcttgttttaggcctat--tagaattgagtcctcttgttttaggtgttaggtgagtgtttttttgggagggtggtt 11952712  T
Q  389 tgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatata 444  Q
    ||||||||||||||||| || ||||||||||||||| ||  ||||||||| |||||    
T  11952711 tgaggttcctcatgtatgcagtagtgattttcatctatgagtgtatcacatatata 11952656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 184 - 494
Target Start/End: Complemental strand, 16227683 - 16227368
Alignment:
Q  184 actactaagtactaccctactaaaaacaaaa-tttctt------tttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnn 276  Q
    |||||||||||||| || ||||||||||||| ||||||      |||||||||||||||| ||||| |||||||||||||||||||| ||||||          
T  16227683 actactaagtactatcccactaaaaacaaaaatttcttattctctttctctctgataccacgcgtttcatcaccatcactccatcggcctttccttttct 16227584  T
Q  277 ncttctccgatttgatttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnn 376  Q
     |||| ||||||||||||| |||||||| |  |||||||||||||| | ||||||  |||||| ||| |||| |||||||||||||||| ||            
T  16227583 tcttccccgatttgatttctttttcctcttttgttgtcttgttttatgtctatta--gaattgagtcatcttacttttggtgttaggtgggtggtttttt 16227486  T
Q  377 gggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaattta 476  Q
    |||||||||||||||||||||| ||||||  | ||||||||||||||| | | ||||||||| ||||| |  || |||||||||||||||||||||||||    
T  16227485 gggagggtggtttgaggttccttatgtatatagtagtgattttcatctatcggtgtatcacatatatacgacaccttgtatttatcttttaaaaaattta 16227386  T
Q  477 aatagaacgttgttcttt 494  Q
    |||||||  |||||||||    
T  16227385 aatagaaaattgttcttt 16227368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 221 - 534
Target Start/End: Complemental strand, 24035816 - 24035505
Alignment:
Q  221 tttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcagttgtcttgttt 320  Q
    |||||||||||| ||| |||||| |||||||||||||||||| | ||||        |||| | |||||||||||||||||||| || ||||||||||||    
T  24035816 tttctctctgatgccacgcgttcgatcaccatcactccatcgaaatttcattttcttcttccctgatttgatttccttttcctcttctgttgtcttgttt 24035717  T
Q  321 taggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaatagtgattttc 420  Q
    |||| ||||||  ||||| ||||||||||||||| |||||||||| ||        |||||||||||||| | |||||||||||| |  |||||||||||    
T  24035716 taggtctatta--gaattaggtcctcttgcttttagtgttaggtgggtgtttttttgggagggtggtttgcgattcctcatgtatgcggtagtgattttc 24035619  T
Q  421 atctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttttnnnnnnntacgttgttattttatt 520  Q
    | |||| | |||||| ||  |||| || || ||||||||||||||||||||||||||||||||| ||||||||||        |||||| ||||||||||    
T  24035618 acctttaggtgtatcgcatttatacggcaccttgtatttatcttttaaaaaatttaaatagaacattgttcttttaaaagaaatacgtttttattttatt 24035519  T
Q  521 acgggcctcttttc 534  Q
    |||||| |||||||    
T  24035518 acgggcatcttttc 24035505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 239 - 534
Target Start/End: Complemental strand, 13800797 - 13800504
Alignment:
Q  239 cgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcagttgtcttgttttaggcctattatagaatt 338  Q
    |||||||||||||||||||||||||||||||        |||||||||||||||||| |||||||| || |||||||||||| ||||||||||  |||||    
T  13800797 cgttccatcaccatcactccatcggactttcattttcttcttctccgatttgatttcattttcctcttctgttgtcttgttt-aggcctatta--gaatt 13800701  T
Q  339 gggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaatagtgattttcatcttt-ggatgtatcac 437  Q
    || || ||||||||||||||||||||||||        |||| |||| ||||||||||||| |||||  | |||||||||||| |||| || |||||| |    
T  13800700 ggatcttcttgcttttggtgttaggtgtgtgtttttttgggaaggtgatttgaggttcctcgtgtatatagtagtgattttcaccttttgggtgtatcgc 13800601  T
Q  438 acatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttttnnnnnnntacgttgttattttattacgggcctcttttc 534  Q
    | ||||| || || || |||||||||||||||||||||||||||||| |||||||||||       ||| || |||||||||||||  |||||||||    
T  13800600 atatatacggcaccttatatttatcttttaaaaaatttaaatagaacattgttctttttaaaaaaatacatttttattttattacgaacctcttttc 13800504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 101 - 496
Target Start/End: Complemental strand, 12134426 - 12134038
Alignment:
Q  101 gccggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaataatataggccggtaatactactaagtactaccc 200  Q
    ||||||| ||||||| |||||| || |||||||||| |||||||  |||||||||| |  |||||| | ||||| ||  || ||||||||||||||| ||    
T  12134426 gccggactttggggtgtgcaagaaggtcaatggaaccgggcctcttcaaggtatggcctcaaaaaaaattatagcccaatagtactactaagtactatcc 12134327  T
Q  201 tactaaaaacaaaat--ttctt-tttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttcct 297  Q
    || |||||| |||||  || || |||||||||||||| | | ||||||||||        |||| |||||||        |||| | ||| |||||||||    
T  12134326 tattaaaaaaaaaatccttattctttctctctgatactacgtgttccatcact-------catcagactttctttttcatcttccctgatatgatttcct 12134234  T
Q  298 tttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcc 397  Q
    ||||||| ||  ||||||||||||||||||||||  |||||| || ||||||||||||||||||||||| |        |||||||||||||||||||||    
T  12134233 tttcctcttct-ttgtcttgttttaggcctatta--gaattgagttctcttgcttttggtgttaggtgtatgtttttgtgggagggtggtttgaggttcc 12134137  T
Q  398 tcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttcttttt 496  Q
    | |||||| |  ||||||||||||  ||||| |||||| || ||||| ||||| ||||||||||||||||||   |||||||||||| |||||||||||    
T  12134136 taatgtatacggtagtgattttcacttttgggtgtatcgcatatatacggtaccttgtatttatcttttaaattttttaaatagaacattgttcttttt 12134038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 183 - 493
Target Start/End: Original strand, 38400587 - 38400899
Alignment:
Q  183 tactactaagtactaccctactaaaaacaaaatttctttttctct------ctgataccatgcgttccatcaccatcactccatcggactttccnnnnnn 276  Q
    |||||||||||||||||| ||||||  ||||||| ||| ||||||      |||||||||   ||||||||||  ||||||||||  ||||||           
T  38400587 tactactaagtactaccccactaaa--caaaattccttattctctttctttctgataccacatgttccatcactgtcactccatcaaactttcgttttct 38400684  T
Q  277 ncttctccgatttgatttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnn 376  Q
     |||| || ||||||||| ||||||||  || |||||||||||||||||||||||  |||| ||||| ||||||||||||||||||||| ||            
T  38400685 tcttccccaatttgattttcttttcctgttctgttgtcttgttttaggcctatta--gaatagggtcatcttgcttttggtgttaggtgggtgttttttt 38400782  T
Q  377 gggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaattta 476  Q
      ||||||||||||||||||||||||||| |  |||||||||||| ||||| ||||||| || ||||| |  || |||||||||||||||||||||||||    
T  38400783 aagagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgaatgtatcgcatatatatgacaccttgtatttatcttttaaaaaattta 38400882  T
Q  477 aatagaacgttgttctt 493  Q
    |||||||| ||||||||    
T  38400883 aatagaacattgttctt 38400899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 100 - 365
Target Start/End: Original strand, 29694087 - 29694357
Alignment:
Q  100 ggccggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaataatataggccggtaatactactaagtactacc 199  Q
    ||||| |||||||||| ||||| ||| |||||||| |||||||||   |||||||||| |||||||| | ||||| ||  || ||||||||||||||||     
T  29694087 ggccgcaccttggggtgtgcaaagagctcaatggagctgggcctccttaaggtatgggtctaaaaaaaattatagcccactagtactactaagtactact 29694186  T
Q  200 ctactaaaaacaaaatttcttt-------ttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgat 292  Q
    |  ||||| |  ||||||| ||       |||| |||||||||| |||||||||||||||||||  |||  | |||||       |||| ||||||||||    
T  29694187 ccgctaaacaataaatttccttattctccttctatctgataccacgcgttccatcaccatcactttatcaaattttccttttcttcttccccgatttgat 29694286  T
Q  293 ttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||| |||||||| || ||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||    
T  29694287 ttctttttcctcttctgttgtcttgttttagacctat--tagaattgggtcctcttgcttttggtgttaggtg 29694357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 292 - 494
Target Start/End: Complemental strand, 11912958 - 11912757
Alignment:
Q  292 tttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnn-gggagggtggtttg 390  Q
    ||||||||||||| |  |||||||||||||||||||||||  |||||||||| ||||| ||||||||||||||| ||         ||||||||||||||    
T  11912958 tttccttttcctcttttgttgtcttgttttaggcctatta--gaattgggtcatcttgattttggtgttaggtgagtgttttttttgggagggtggtttg 11912861  T
Q  391 aggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgtt 490  Q
    |||||||| |||||| |  |||||||||||||||||||||||||  || ||||| || || |||||||||| ||||   ||||||||||||||| |||||    
T  11912860 aggttccttatgtatacggtagtgattttcatctttggatgtattgcatatatacggcactttgtatttatttttttttaaatttaaatagaacattgtt 11912761  T
Q  491 cttt 494  Q
    ||||    
T  11912760 cttt 11912757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 278 - 434
Target Start/End: Original strand, 37182558 - 37182712
Alignment:
Q  278 cttctccgatttgatttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnng 377  Q
    |||| |||||||||||||||||||||| ||  ||||||||||||||||||||  |||||||||||| ||||||||||| ||||||||| ||        |    
T  37182558 cttccccgatttgatttccttttcctcttctattgtcttgttttaggcctat--tagaattgggtcatcttgcttttgctgttaggtgggtgtttttttg 37182655  T
Q  378 ggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtat 434  Q
    |||||||| ||||||||||||||||||| |  ||||||||||||  ||||| |||||    
T  37182656 ggagggtgatttgaggttcctcatgtatacggtagtgattttcacttttgggtgtat 37182712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 382 - 495
Target Start/End: Original strand, 16096998 - 16097111
Alignment:
Q  382 ggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatag 481  Q
    ||||||||||||||||||||||||    |||| ||||||| |||||| ||||   || ||||| || || ||||||||||||||||||||||||||||||    
T  16096998 ggtggtttgaggttcctcatgtataaggtagtaattttcacctttgggtgtacatcatatatacggcaccttgtatttatcttttaaaaaatttaaatag 16097097  T
Q  482 aacgttgttctttt 495  Q
    ||| ||||||||||    
T  16097098 aacattgttctttt 16097111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 377 - 495
Target Start/End: Complemental strand, 7742251 - 7742132
Alignment:
Q  377 gggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaa-aaaattt 475  Q
    ||||| |||||||||||||||||||| || | |||||  |||||| ||||||||||| | || ||||| |  |||||||||||||||||||| ||||| |    
T  7742251 gggagagtggtttgaggttcctcatgcatacgatagtatttttcacctttggatgtaacgcatatatatgacacattgtatttatcttttaaaaaaatat 7742152  T
Q  476 aaatagaacgttgttctttt 495  Q
    ||||||||| ||||||||||    
T  7742151 aaatagaacattgttctttt 7742132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 10252326 - 10252421
Alignment:
Q  309 gttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtg-ttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtat 405  Q
    |||||||||||||||||||||||  |||||||||| |||||||||||||| ||||||| ||         ||||||||||||||||||||||||||||    
T  10252326 gttgtcttgttttaggcctatta--gaattgggtcatcttgcttttggtgtttaggtgggtgttttttttggagggtggtttgaggttcctcatgtat 10252421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 448 - 534
Target Start/End: Complemental strand, 22727503 - 22727417
Alignment:
Q  448 tacattgtatttatcttttaaaaaatttaaatagaacgttgttctttttnnnnnnntacgttgttattttattacgggcctcttttc 534  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||        |||||| ||||||||||||  ||||||||||    
T  22727503 tacatagtatttatcttttaaaaaatttaaatagaacattgttcttttaaaaaaaatacgtttttattttattacttgcctcttttc 22727417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 6965007 - 6965110
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||||||||||| |  |||| ||||||| || ||| |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||| ||    
T  6965007 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcactttgtatttatcttttaaaaaatataaatagaacattgctc 6965106  T
Q  492 tttt 495  Q
    ||||    
T  6965107 tttt 6965110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 12337550 - 12337447
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||||||||||| |  |||| ||||||| || ||| |||| |||| ||||| |  || |||||||||||||||||||||| |||||||||| ||| ||    
T  12337550 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccacatatatatgacaccttgtatttatcttttaaaaaatataaatagaacattgctc 12337451  T
Q  492 tttt 495  Q
    ||||    
T  12337450 tttt 12337447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 392 - 494
Target Start/End: Complemental strand, 10762667 - 10762565
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||||||||||| |  |||| ||||||| |||||| |||| |||| |||||  | || || ||||||||||||||||||| |||||||||| ||| ||    
T  10762667 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccacatatataccgcaccttatatttatcttttaaaaaatataaatagaacattgctc 10762568  T
Q  492 ttt 494  Q
    |||    
T  10762567 ttt 10762565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 392 - 490
Target Start/End: Original strand, 24410437 - 24410535
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgtt 490  Q
    |||||||||||||| |  |||| ||||||| |||||| |||| | || ||||| || || || ||||||||||||||||||| |||||||||| |||||    
T  24410437 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgtt 24410535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 482
Target Start/End: Complemental strand, 27506841 - 27506752
Alignment:
Q  393 gttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaataga 482  Q
    ||||||||||||| || |||| ||||| | |||||| |||| |||| ||||| || || || ||||||||||||||||||| ||||||||    
T  27506841 gttcctcatgtatacagtagtcatttttacctttgggtgtaccacatatatacggcaccttatatttatcttttaaaaaatataaataga 27506752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 9046029 - 9046133
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatctttt-aaaaaatttaaatagaacgttgtt 490  Q
    |||||||||||||| |  |||| ||||||| |||||| |||| | || ||||| || || || |||||||||||| ||||||| |||||||||| |||||    
T  9046029 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaaatataaatagaacattgtt 9046128  T
Q  491 ctttt 495  Q
    |||||    
T  9046129 ctttt 9046133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 109 - 169
Target Start/End: Complemental strand, 24035923 - 24035863
Alignment:
Q  109 ttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaataa 169  Q
    ||||||| ||||||||| |||||||||| ||||||| ||||||| || |||||||||||||    
T  24035923 ttggggtgtgcaaggagctcaatggaaccgggcctccccaaggtgtgagcctaaaaaataa 24035863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 3155217 - 3155320
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||||||||||| |  |||| ||||||| || | | |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||| ||    
T  3155217 ggttcctcatgtatacggtagtcattttcacctctaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 3155316  T
Q  492 tttt 495  Q
    ||||    
T  3155317 tttt 3155320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 4505894 - 4505997
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||||||||||| |  |||| ||||| | || ||| |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||| ||    
T  4505894 ggttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 4505993  T
Q  492 tttt 495  Q
    ||||    
T  4505994 tttt 4505997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 29939964 - 29939861
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||||||||||| |  |||| ||||||| |||||| |||| | || ||||| |  || ||||||||||||| |||||||| |||||||||| ||| ||    
T  29939964 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttgtatttatcttgtaaaaaatataaatagaacattgctc 29939865  T
Q  492 tttt 495  Q
    ||||    
T  29939864 tttt 29939861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 430 - 534
Target Start/End: Original strand, 34694013 - 34694117
Alignment:
Q  430 tgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttttnnnnnnntacgttgttattttattacgggcctc 529  Q
    |||| |||| ||||| || || |||||||||||||||||||||| |||||||||| ||| ||||||        |||||| | ||||||| |||||||||    
T  34694013 tgtaccacatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaatacgttttgattttatcacgggcctc 34694112  T
Q  530 ttttc 534  Q
    |||||    
T  34694113 ttttc 34694117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 430 - 534
Target Start/End: Original strand, 34716425 - 34716529
Alignment:
Q  430 tgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttttnnnnnnntacgttgttattttattacgggcctc 529  Q
    |||| |||| ||||| || || |||||||||||||||||||||| |||||||||| ||| ||||||        |||||| | ||||||| |||||||||    
T  34716425 tgtaccacatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaatacgttttgattttatcacgggcctc 34716524  T
Q  530 ttttc 534  Q
    |||||    
T  34716525 ttttc 34716529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 183 - 270
Target Start/End: Complemental strand, 37622639 - 37622543
Alignment:
Q  183 tactactaagtactaccctactaaaaa---caaaatttctt------tttctctctgataccatgcgttccatcaccatcactccatcggactttcc 270  Q
    |||||||||||||||||| ||||||||   |||| ||||||      ||||||||| |||||| ||||||||||| |||||||||||| ||||||||    
T  37622639 tactactaagtactaccccactaaaaaaaacaaattttcttattatctttctctctcataccacgcgttccatcatcatcactccatcagactttcc 37622543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 455 - 494
Target Start/End: Original strand, 42029208 - 42029247
Alignment:
Q  455 tatttatcttttaaaaaatttaaatagaacgttgttcttt 494  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  42029208 tatttatcttttaaaaaatttaaatagaacattgttcttt 42029247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 495
Target Start/End: Complemental strand, 28425827 - 28425709
Alignment:
Q  377 gggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaattta 476  Q
    ||||||| || |||||||||||||| |||    ||||||||||||  ||||| ||||   || ||||| |  || |||||||||||||||||||  ||||    
T  28425827 gggagggaggcttgaggttcctcatatatatggtagtgattttcacatttgggtgtactgcatatatacgacaccttgtatttatcttttaaaattttta 28425728  T
Q  477 aatagaacgttgttctttt 495  Q
    |||||||| ||||||||||    
T  28425727 aatagaacattgttctttt 28425709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 365
Target Start/End: Original strand, 8327618 - 8327663
Alignment:
Q  318 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  8327618 ttttaggcctatta--gaattaggtcctcttgcttttggtgttaggtg 8327663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 458 - 494
Target Start/End: Complemental strand, 11952624 - 11952588
Alignment:
Q  458 ttatcttttaaaaaatttaaatagaacgttgttcttt 494  Q
    ||||||||||||||||||||||||||| |||||||||    
T  11952624 ttatcttttaaaaaatttaaatagaacattgttcttt 11952588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 26716128 - 26716232
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatctttt-aaaaaatttaaatagaacgttgtt 490  Q
    |||||||||||||| |  |||| ||||||| |||||| |||| | || ||||| || || || |||||||||||| ||||||| |||||||||| ||| |    
T  26716128 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatatggcaccttatatttatcttttaaaaaaatataaatagaacattgct 26716227  T
Q  491 ctttt 495  Q
    |||||    
T  26716228 ctttt 26716232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 452 - 495
Target Start/End: Original strand, 40636198 - 40636241
Alignment:
Q  452 ttgtatttatcttttaaaaaatttaaatagaacgttgttctttt 495  Q
    |||||||||||||||||||||| |||||||||| ||| ||||||    
T  40636198 ttgtatttatcttttaaaaaatataaatagaacattgctctttt 40636241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 452 - 494
Target Start/End: Original strand, 10252476 - 10252518
Alignment:
Q  452 ttgtatttatcttttaaaaaatttaaatagaacgttgttcttt 494  Q
    |||||||||||||||||||||||||||| |||| || ||||||    
T  10252476 ttgtatttatcttttaaaaaatttaaattgaacatttttcttt 10252518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 452 - 484
Target Start/End: Original strand, 3953066 - 3953098
Alignment:
Q  452 ttgtatttatcttttaaaaaatttaaatagaac 484  Q
    |||||||||||||||||||||| ||||||||||    
T  3953066 ttgtatttatcttttaaaaaatataaatagaac 3953098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 452 - 484
Target Start/End: Original strand, 7162844 - 7162876
Alignment:
Q  452 ttgtatttatcttttaaaaaatttaaatagaac 484  Q
    |||||||||||||||||||||| ||||||||||    
T  7162844 ttgtatttatcttttaaaaaatataaatagaac 7162876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 452 - 484
Target Start/End: Complemental strand, 8907121 - 8907089
Alignment:
Q  452 ttgtatttatcttttaaaaaatttaaatagaac 484  Q
    |||||||||||||||||||||| ||||||||||    
T  8907121 ttgtatttatcttttaaaaaatataaatagaac 8907089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 365
Target Start/End: Complemental strand, 10762715 - 10762670
Alignment:
Q  318 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||||  ||||| ||||||||||| ||||||||||||||    
T  10762715 ttttaggcctatta--gaattaggtcctcttgcatttggtgttaggtg 10762670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 365
Target Start/End: Complemental strand, 27506890 - 27506845
Alignment:
Q  318 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||||  ||||| |||| |||||||||||||||||||||    
T  27506890 ttttaggcctatta--gaattaggtcatcttgcttttggtgttaggtg 27506845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 128; Significance: 6e-66; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 219 - 495
Target Start/End: Complemental strand, 15167686 - 15167414
Alignment:
Q  219 tttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcagttgtcttgt 318  Q
    |||||||||||||||||| |||||||||||||||||||| ||| ||||||||       ||||||||||||||||||||||||||| || ||||||||||    
T  15167686 tttttctctctgataccacgcgttccatcaccatcactctatcagactttccttttcttcttctccgatttgatttccttttcctcttctgttgtcttgt 15167587  T
Q  319 tttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaatagtgattt 418  Q
    |||||||||||  ||||||||||||||||| |||||||||||||||| ||        || |||||||||||||||||||||||||| | ||||||||||    
T  15167586 tttaggcctat--tagaattgggtcctcttacttttggtgttaggtgggt--ttttttggaagggtggtttgaggttcctcatgtatacgatagtgattt 15167491  T
Q  419 tcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttt 495  Q
    |||  ||||| |||||| || |||||    || || |||||||||||||||||||||||||||||| ||||||||||    
T  15167490 tcacatttgggtgtatcgcatatatacaacactttatatttatcttttaaaaaatttaaatagaacattgttctttt 15167414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 102 - 494
Target Start/End: Complemental strand, 34049103 - 34048705
Alignment:
Q  102 ccggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaataatataggccggtaatactactaagtactaccct 201  Q
    |||||||||||||| ||||||||  | |||| ||||| | ||| | | |||||| || ||||||| | ||||| || |||  ||||||||||||||||||    
T  34049103 ccggaccttggggtgtgcaaggaacttaatgaaactgtgtctccctatggtatgagcttaaaaaa-attatagcccagtagaactactaagtactaccct 34049005  T
Q  202 actaaaaacaaaatttcttt-------ttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgattt 294  Q
    ||||||||||||| ||| ||       ||||||| ||||||| |||||||||||||||||||||||||||||||||       |||| ||||||||||||    
T  34049004 actaaaaacaaaaattcattattctctttctctccgataccacgcgttccatcaccatcactccatcggactttccttttcttcttccccgatttgattt 34048905  T
Q  295 ccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggt 394  Q
    |||||||||| || ||||||||||  |||||||||  |||||| | | | | || |||||||||||||||| ||         |||||||||| |||||     
T  34048904 ccttttcctcttctgttgtcttgtgctaggcctat--tagaatcgagccattttacttttggtgttaggtgagtgttttttttggagggtggtatgagga 34048807  T
Q  395 tcctcatgtattcaatagtgattttcatctttggatgtatc--acacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttct 492  Q
    ||||||||||| || ||||||||||||||||||| ||||||  | | ||||| |  ||||||||||||||||||||||  |||||||||||| |||||||    
T  34048806 tcctcatgtatacagtagtgattttcatctttgggtgtatcatatatatatacgacacattgtatttatcttttaaaatgtttaaatagaacattgttct 34048707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 183 - 534
Target Start/End: Original strand, 15078548 - 15078901
Alignment:
Q  183 tactactaagtactaccctactaaaaacaaaatttctt------tttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnn 276  Q
    |||||||||||||||||| |||||| | |||||| |||      |||||||||||||||| |||||||||||||||||||| ||| |||||||           
T  15078548 tactactaagtactaccccactaaataaaaaattccttattatttttctctctgataccacgcgttccatcaccatcactctatcagactttcattttct 15078647  T
Q  277 ncttctccgatttgatttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnn 376  Q
     ||||||||||||||||||||||||||| || ||||||||||||||||||| |  ||||||||||||||||| |||||||||||||  ||| |           
T  15078648 tcttctccgatttgatttccttttcctcttctgttgtcttgttttaggcctgt--tagaattgggtcctcttacttttggtgttag--gtgaattttttt 15078743  T
Q  377 gggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaattta 476  Q
    || || ||||||||||||||||||||||| | |||||||||||||  ||||| |||||  || |||||  | || || ||||||||||||||||| ||||    
T  15078744 ggaagcgtggtttgaggttcctcatgtatacgatagtgattttcacatttgggtgtatagcatatatacagcaccttatatttatcttttaaaaatttta 15078843  T
Q  477 aatagaacgttgttctttttnnnnnnntacgttgttattttattacgggcctcttttc 534  Q
    |||||||| || |||||||        |||||| |||||||||||||| | |||||||    
T  15078844 aatagaacattattcttttaaaaaaaatacgtttttattttattacggacttcttttc 15078901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 278 - 495
Target Start/End: Complemental strand, 41677387 - 41677172
Alignment:
Q  278 cttctccgatttgatttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnng 377  Q
    |||| |||||||||||||||||||||| |  |||||||||||||||||||||||  |||| ||||||||||||||||||||||||||| ||        |    
T  41677387 cttccccgatttgatttccttttcctcttatgttgtcttgttttaggcctatta--gaatcgggtcctcttgcttttggtgttaggtgggtgtttttttg 41677290  T
Q  378 ggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatctttt-aaaaaattta 476  Q
    | |||||||||||||||||||||||||| || |||||||||||| |||| |||||||| || ||||| |  |  ||||||||||||||| ||||||||||    
T  41677289 g-agggtggtttgaggttcctcatgtatacagtagtgattttcacctttagatgtatcgcatatatacgacatcttgtatttatcttttaaaaaaattta 41677191  T
Q  477 aatagaacgttgttctttt 495  Q
    |||||||| ||||||||||    
T  41677190 aatagaacattgttctttt 41677172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 310 - 534
Target Start/End: Complemental strand, 7944704 - 7944482
Alignment:
Q  310 ttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaa 409  Q
    |||||||||||||||||||||| |  |||| ||||||||||||||||||||||||| ||        |||| |||||||||||||||||||||||| |      
T  7944704 ttgtcttgttttaggcctattaaa--attgtgtcctcttgcttttggtgttaggtgggtgtttttttgggatggtggtttgaggttcctcatgtatacgg 7944607  T
Q  410 tagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttttnnnnnnntacgtt 509  Q
    |||||||||||| |||||| ||||  ||| ||||| || || |||||||||| |||||||||||||||||| ||| ||||||||||        ||| ||    
T  7944606 tagtgattttcacctttgggtgtacaacatatatacggcaccttgtatttattttttaaaaaatttaaataaaacattgttcttttaaaaaaaatacatt 7944507  T
Q  510 gttattttattacgggcctcttttc 534  Q
     |||||||||||||| |||||||||    
T  7944506 tttattttattacggacctcttttc 7944482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 191 - 495
Target Start/End: Original strand, 8646001 - 8646309
Alignment:
Q  191 agtactaccctactaaaaacaaaatttctt-tttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgattt 289  Q
    |||||||||| |||||||| ||| | | || |||||||||||||||| ||||| |||||| |||||||||||  ||||||        |||| | |||||    
T  8646001 agtactaccccactaaaaaaaaattattttctttctctctgataccacgcgtttcatcactatcactccatcatactttcattttcttcttccctgattt 8646100  T
Q  290 gatttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtg---- 385  Q
    ||||||||||||||| |  |||||||||||||||||||||  | ||||| |||| ||||||||||||||||||||||||        |||||||||        
T  8646101 gatttccttttcctcttatgttgtcttgttttaggcctat--tcgaattaggtcatcttgcttttggtgttaggtgtgtgtttttttgggagggtggttt 8646198  T
Q  386 --gtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaa 483  Q
      |||||||||| || |||||| |  ||||||||||||  ||||  |||||  || ||||| | ||| ||||||||||||||||||||||||||||||||    
T  8646199 gagtttgaggtttcttatgtatacggtagtgattttcacatttgcgtgtat-gcatatatacgataccttgtatttatcttttaaaaaatttaaatagaa 8646297  T
Q  484 cgttgttctttt 495  Q
    | ||||||||||    
T  8646298 cattgttctttt 8646309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 309 - 495
Target Start/End: Original strand, 11290104 - 11290288
Alignment:
Q  309 gttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattca 408  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||| |||||||  |        |||| |||||||||||||| ||||||||| |     
T  11290104 gttgtcttgttttaggcctatta--gaattgggtcctgttgcttttggtattaggtggatgttttgttgggatggtggtttgaggttgctcatgtatacg 11290201  T
Q  409 atagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttt 495  Q
     |||||||||||| |||||  ||||  ||| ||||| |  || ||||||||||||||||||||||||||||| ||| ||||||||||    
T  11290202 gtagtgattttcacctttgagtgtacaacatatatacgacaccttgtatttatcttttaaaaaatttaaataaaacattgttctttt 11290288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 379 - 494
Target Start/End: Complemental strand, 39332520 - 39332405
Alignment:
Q  379 gagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaa 478  Q
    ||||||||||||||||||||||||||| |  |||||||||||| ||||||||||| | |  ||||| |  || ||||||||||||||| ||||| |||||    
T  39332520 gagggtggtttgaggttcctcatgtatacggtagtgattttcacctttggatgtaccgcttatatatgacaccttgtatttatctttttaaaaaattaaa 39332421  T
Q  479 tagaacgttgttcttt 494  Q
    |||||| |||||||||    
T  39332420 tagaacattgttcttt 39332405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 41879182 - 41879285
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||| |||||||||||  |||| ||||||| ||||||||||| | || ||||| ||||| |||||||||||||||||||||| |||||||||| ||||||    
T  41879182 ggtttctcatgtattcggtagtcattttcacctttggatgtaccgcatatatacggtaccttgtatttatcttttaaaaaatataaatagaacattgttc 41879281  T
Q  492 tttt 495  Q
    ||||    
T  41879282 tttt 41879285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 382 - 495
Target Start/End: Complemental strand, 5973219 - 5973106
Alignment:
Q  382 ggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatag 481  Q
    |||||||||||||||||| ||||| |  || |||||||||||| ||| ||||  ||| ||||| |  || ||||||||||||||||||||||||||||||    
T  5973219 ggtggtttgaggttcctcgtgtatacggtaatgattttcatctatgggtgtacaacatatatacgacaccttgtatttatcttttaaaaaatttaaatag 5973120  T
Q  482 aacgttgttctttt 495  Q
    ||| ||||||||||    
T  5973119 aacattgttctttt 5973106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 292 - 365
Target Start/End: Complemental strand, 25561706 - 25561635
Alignment:
Q  292 tttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||  || |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  25561706 tttccttttcctattctgttgtcttgttttaggcctatta--gaattgggtcctcttgcttttggtgttaggtg 25561635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 377 - 490
Target Start/End: Complemental strand, 23941208 - 23941095
Alignment:
Q  377 gggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaattta 476  Q
    ||||||||||||||||||||||| | |||   || ||||||||||||||||| |||||| |  ||||| |  || |||||||||||||||||||||||||    
T  23941208 gggagggtggtttgaggttcctcgtatatatgattgtgattttcatctttgggtgtatcgcttatatatgacaccttgtatttatcttttaaaaaattta 23941109  T
Q  477 aatagaacgttgtt 490  Q
    |||| ||| |||||    
T  23941108 aataaaacattgtt 23941095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 377 - 472
Target Start/End: Original strand, 5942682 - 5942777
Alignment:
Q  377 gggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaa 472  Q
    ||||||||||||||||||||||||||||| |  |||||||||||| |||||| |||| | |||||||| |  |  |||||||||||||||||||||    
T  5942682 gggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggtgtaccgcacatatacgacatcttgtatttatcttttaaaaaa 5942777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 244 - 363
Target Start/End: Complemental strand, 38009384 - 38009267
Alignment:
Q  244 catcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtc 343  Q
    ||||||||||||||||||  |||||||       ||| |||||||| |||||||||||||| || |||||||||||||||||||||  ||||| || ||     
T  38009384 catcaccatcactccatcatactttccttttcttcttgtccgatttaatttccttttcctcttctgttgtcttgttttaggcctat--tagaactgagtt 38009287  T
Q  344 ctcttgcttttggtgttagg 363  Q
    || |||||||||||||||||    
T  38009286 cttttgcttttggtgttagg 38009267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 392 - 496
Target Start/End: Complemental strand, 2952323 - 2952219
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||||||||||| |  |||| |||||||||| ||| |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||| ||    
T  2952323 ggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcactttgtatttatcttttaaaaaatataaatagaacattgctc 2952224  T
Q  492 ttttt 496  Q
    |||||    
T  2952223 ttttt 2952219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 377 - 484
Target Start/End: Original strand, 5721545 - 5721652
Alignment:
Q  377 gggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaattta 476  Q
    |||||||||||||||||||||||| |||| |  ||||||||||||  ||||| |||| |    ||||| || || ||||||||||||||||||||| |||    
T  5721545 gggagggtggtttgaggttcctcaggtatacggtagtgattttcacttttgggtgtaccgattatatagggcaccttgtatttatcttttaaaaaaatta 5721644  T
Q  477 aatagaac 484  Q
    ||||||||    
T  5721645 aatagaac 5721652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 30883330 - 30883433
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||||||||||| |  |||| ||||||| || ||| |||| | || ||||| || ||||||||||||||||||||||||| |||||||||| ||| ||    
T  30883330 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcacattgtatttatcttttaaaaaatataaatagaacattgctc 30883429  T
Q  492 tttt 495  Q
    ||||    
T  30883430 tttt 30883433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 103 - 166
Target Start/End: Complemental strand, 7944826 - 7944763
Alignment:
Q  103 cggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaa 166  Q
    ||||||||||||| |||||   ||||||||||||||||| || |||||||||||||||||||||    
T  7944826 cggaccttggggtgtgcaaaccgttcaatggaactgggcttccccaaggtatgggcctaaaaaa 7944763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 385 - 480
Target Start/End: Original strand, 8102906 - 8103001
Alignment:
Q  385 ggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaata 480  Q
    ||||||||||||||||||||| |  || ||||||||| |||| | |||| | || |||||  | || |||||||||||||||||||||||||||||    
T  8102906 ggtttgaggttcctcatgtatacggtaatgattttcacctttaggtgtaccgcatatatactgcaccttgtatttatcttttaaaaaatttaaata 8103001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 45475818 - 45475921
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||||||||||| |  |||| ||||||| || ||| |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||| ||    
T  45475818 ggttcctcatgtatacggtagtcattttcacctatgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 45475917  T
Q  492 tttt 495  Q
    ||||    
T  45475918 tttt 45475921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 452 - 494
Target Start/End: Original strand, 9108554 - 9108596
Alignment:
Q  452 ttgtatttatcttttaaaaaatttaaatagaacgttgttcttt 494  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  9108554 ttgtatttatcttttaaaaaatttaaatagaacattgttcttt 9108596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 100 - 166
Target Start/End: Complemental strand, 25562076 - 25562010
Alignment:
Q  100 ggccggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaa 166  Q
    |||||||||||||||| ||||||||| |||||||||   |||||| |||| ||||||||||||||||    
T  25562076 ggccggaccttggggtgtgcaaggagctcaatggaatcaggcctccccaaagtatgggcctaaaaaa 25562010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 332 - 495
Target Start/End: Complemental strand, 34790024 - 34789861
Alignment:
Q  332 tagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatg 431  Q
    |||||||||||| |||| |||||||||||||||| ||         ||| ||||||||||  || ||||||||| |  |||||||||||| |||||| ||    
T  34790024 tagaattgggtcatcttacttttggtgttaggtgggtgtttttttaggatggtggtttgatatttctcatgtatacggtagtgattttcacctttgggtg 34789925  T
Q  432 tatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttt 495  Q
    ||  ||| ||||| |  |  ||||||||||||||||| | ||||||||||||| | ||||||||    
T  34789924 tacaacatatatacgacatcttgtatttatcttttaagagatttaaatagaacatcgttctttt 34789861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 392 - 482
Target Start/End: Original strand, 42600783 - 42600873
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaataga 482  Q
    |||||||||||||| |  |||| ||||||| |||||| |||| |||| ||||| || || || ||||||||||||||||||| ||||||||    
T  42600783 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccacatatatacggcaccttatatttatcttttaaaaaatataaataga 42600873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 412 - 534
Target Start/End: Complemental strand, 30674485 - 30674363
Alignment:
Q  412 gtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttttnnnnnnntacgttgt 511  Q
    |||||||||| |||||  |||||| || ||||| |  || || |||||||||||||||| ||||||||||||| |||||||||         |||||| |    
T  30674485 gtgattttcacctttgagtgtatcgcatatatacgacaccttatatttatcttttaaaacatttaaatagaacattgttctttaaaaaaaaatacgtttt 30674386  T
Q  512 tattttattacgggcctcttttc 534  Q
    |||||||||||| ||||||||||    
T  30674385 tattttattacgagcctcttttc 30674363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 13534788 - 13534686
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||||||||||| |  |||| ||||||| || ||| |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||| ||    
T  13534788 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcac-ttgtatttatcttttaaaaaatataaatagaacattgctc 13534690  T
Q  492 tttt 495  Q
    ||||    
T  13534689 tttt 13534686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 13624328 - 13624226
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||||||||||| |  |||| ||||||| || ||| |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||| ||    
T  13624328 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcac-ttgtatttatcttttaaaaaatataaatagaacattgctc 13624230  T
Q  492 tttt 495  Q
    ||||    
T  13624229 tttt 13624226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 23606731 - 23606628
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||||||||||| |  |||| ||||| | |||||| |||| | || ||||| || || || ||||||||||||||||||| |||||||||| ||| ||    
T  23606731 ggttcctcatgtatacggtagtcatttttacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctc 23606632  T
Q  492 tttt 495  Q
    ||||    
T  23606631 tttt 23606628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 320 - 365
Target Start/End: Original strand, 8102845 - 8102888
Alignment:
Q  320 ttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||    
T  8102845 ttaggcctatta--gaattgggtcctcttgcttttggtgttaggtg 8102888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 494
Target Start/End: Complemental strand, 23798363 - 23798261
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||||||||||| |  |||| |||||||  ||||| |||| | || ||||| || || || ||||||||||||||||||| |||||||||| ||| ||    
T  23798363 ggttcctcatgtatacggtagtcattttcacttttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctc 23798264  T
Q  492 ttt 494  Q
    |||    
T  23798263 ttt 23798261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 452 - 494
Target Start/End: Complemental strand, 34868219 - 34868177
Alignment:
Q  452 ttgtatttatcttttaaaaaatttaaatagaacgttgttcttt 494  Q
    ||||||||||||||||||||||||||||||||| || ||||||    
T  34868219 ttgtatttatcttttaaaaaatttaaatagaacattattcttt 34868177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 392 - 534
Target Start/End: Original strand, 10917392 - 10917534
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    ||||||||||||||    |||| ||||||| |||||| |||| | || ||||| || || || ||||||||||||||||||| |||||||| | |||||     
T  10917392 ggttcctcatgtataaggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagatcattgttt 10917491  T
Q  492 tttttnnnnnnntacgttgttattttattacgggcctcttttc 534  Q
    |||||       |||||| | ||||||| || |||||||||||    
T  10917492 tttttaaaaaaatacgttttgattttatcactggcctcttttc 10917534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 410 - 494
Target Start/End: Complemental strand, 5860828 - 5860744
Alignment:
Q  410 tagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttcttt 494  Q
    |||| ||||||| || ||| |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||| |||||    
T  5860828 tagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 5860744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 364
Target Start/End: Complemental strand, 5973288 - 5973235
Alignment:
Q  309 gttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggt 364  Q
    |||||||||||||||| ||||||  ||||||| || ||||||||||||||||||||    
T  5973288 gttgtcttgttttaggtctatta--gaattggatcatcttgcttttggtgttaggt 5973235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 365
Target Start/End: Complemental strand, 23606779 - 23606734
Alignment:
Q  318 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  23606779 ttttaggcctatta--gaattaggtcctcttgcttttggtgttaggtg 23606734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 365
Target Start/End: Complemental strand, 23798411 - 23798366
Alignment:
Q  318 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  23798411 ttttaggcctatta--gaattaggtcctcttgcttttggtgttaggtg 23798366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 495
Target Start/End: Complemental strand, 38009191 - 38009151
Alignment:
Q  455 tatttatcttttaaaaaatttaaatagaacgttgttctttt 495  Q
    ||||||||||||||||| |||||||||||| ||||||||||    
T  38009191 tatttatcttttaaaaattttaaatagaacattgttctttt 38009151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 364
Target Start/End: Complemental strand, 30674559 - 30674507
Alignment:
Q  310 ttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggt 364  Q
    ||||||||||||||| |||||   ||||||||| |||||||||||||||||||||    
T  30674559 ttgtcttgttttaggtctattt--gaattgggttctcttgcttttggtgttaggt 30674507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 95 - 157
Target Start/End: Complemental strand, 5973429 - 5973367
Alignment:
Q  95 agcaaggccggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatggg 157  Q
    |||| |||| |||||||||||||||||   | |||||||| ||||||||| ||||||||||||    
T  5973429 agcagggccagaccttggggtctgcaaaccgctcaatggagctgggcctccccaaggtatggg 5973367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 100 - 166
Target Start/End: Complemental strand, 38009545 - 38009479
Alignment:
Q  100 ggccggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaa 166  Q
    |||||||||||||||| || || ||| |||||||| ||| ||||| ||||||||||  |||||||||    
T  38009545 ggccggaccttggggtgtgtaaagagctcaatggagctgagcctccccaaggtatgaacctaaaaaa 38009479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 481
Target Start/End: Complemental strand, 3048619 - 3048530
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatag 481  Q
    |||||||| ||||| |  |||| |||||||||| | | |||| | || ||||| || || |||||||||||||||||||||| |||||||    
T  3048619 ggttcctcgtgtatacggtagtcattttcatctctaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatag 3048530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 8645917 - 8645961
Alignment:
Q  100 ggccggaccttggggtctgcaaggagttcaatggaactgggcctc 144  Q
    |||||||||||| ||| ||||||||| |||||||||||| |||||    
T  8645917 ggccggaccttgtggtgtgcaaggagctcaatggaactgagcctc 8645961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 365
Target Start/End: Original strand, 10917344 - 10917389
Alignment:
Q  318 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||||  ||||| |||| |||||||||||||||||||||    
T  10917344 ttttaggcctatta--gaattaggtcatcttgcttttggtgttaggtg 10917389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 452 - 484
Target Start/End: Complemental strand, 37430200 - 37430168
Alignment:
Q  452 ttgtatttatcttttaaaaaatttaaatagaac 484  Q
    |||||||||||||||||||||| ||||||||||    
T  37430200 ttgtatttatcttttaaaaaatataaatagaac 37430168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 365
Target Start/End: Original strand, 42600735 - 42600780
Alignment:
Q  318 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||||  ||||| |||| |||||||||||||||||||||    
T  42600735 ttttaggcctatta--gaattaggtcttcttgcttttggtgttaggtg 42600780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 365
Target Start/End: Original strand, 45475770 - 45475815
Alignment:
Q  318 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||||  ||||| | ||||||||||||||||||||||||    
T  45475770 ttttaggcctatta--gaattagttcctcttgcttttggtgttaggtg 45475815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 127; Significance: 2e-65; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 216 - 495
Target Start/End: Original strand, 52468118 - 52468395
Alignment:
Q  216 ttctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcagttgtct 315  Q
    |||| |||||||||||||||| |||||||||||||||||||||||| ||||||||       |||| ||||||| |||||||||||||| |  |||||||    
T  52468118 ttctctttctctctgataccacgcgttccatcaccatcactccatcagactttcctttttttcttccccgatttcatttccttttcctcttatgttgtct 52468217  T
Q  316 tgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaatagtga 415  Q
    ||||||||||||||  |||||||| ||||||||| |||||| |||||||| ||        |||| ||||||||||||||||||||| || |  ||||||    
T  52468218 tgttttaggcctat--tagaattgagtcctcttgtttttggcgttaggtgggtgtctttttgggaaggtggtttgaggttcctcatgcatacggtagtga 52468315  T
Q  416 ttttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttt 495  Q
    |||||| |||||||||||| ||| ||||| || || ||||||||||||||||||||||||||||||||| ||||||||||    
T  52468316 ttttcacctttggatgtataacatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacattgttctttt 52468395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 103 - 491
Target Start/End: Original strand, 27111747 - 27112135
Alignment:
Q  103 cggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaataat-ataggccggtaatactactaagtactaccct 201  Q
    ||||||||| ||| ||||||||| |||||| ||| ||||||| |||||| ||||| |||||||| | | |||| || ||| ||||||||||||||||||     
T  27111747 cggaccttgaggtgtgcaaggagctcaatgcaaccgggcctccccaaggcatgggtctaaaaaaaagttatagcccagtagtactactaagtactacccc 27111846  T
Q  202 actaaaaacaaaatt--tctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttt 299  Q
    | |||||| |   ||  ||| ||| |||||||||||| || |||| ||||||||||||| || ||||||||       |||||| |||||||||||||||    
T  27111847 attaaaaaaatccttattctctttatctctgataccacgctttccttcaccatcactccgtcagactttccttttcttcttctctgatttgatttccttt 27111946  T
Q  300 tcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctc 399  Q
    ||||| |  ||| ||||||||||| |||||||  |||||| |||||||||||||| |||||||||| ||        |||||||||||||||||||||||    
T  27111947 tcctcttttgttttcttgttttag-cctatta--gaattgagtcctcttgctttttgtgttaggtgggtgtttttctgggagggtggtttgaggttcctc 27112043  T
Q  400 atgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||| |  ||||||||||||  ||| | |||||| || ||||| |  || |||||||||||||||||||||||||||| |||| ||||||    
T  27112044 atgtatacggtagtgattttcacattttggtgtatcgcatatatatgtcaccttgtatttatcttttaaaaaatttaaattgaacattgttc 27112135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 216 - 534
Target Start/End: Complemental strand, 36118732 - 36118418
Alignment:
Q  216 ttctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcagttgtct 315  Q
    |||| |||||||||||||||| || |||||| |||||||||||||||||||||||       |||| |||||||||||||||||||||| ||  ||||||    
T  36118732 ttctctttctctctgataccacgctttccattaccatcactccatcggactttccttttcttcttccccgatttgatttccttttcctcttctattgtct 36118633  T
Q  316 tgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaatagtga 415  Q
    | ||||||||||||  |||||||||||| ||||||||||||||||||||| |          | ||||||||| |||||| ||||||||| |  ||||||    
T  36118632 tcttttaggcctat--tagaattgggtcatcttgcttttggtgttaggtg-gatgtttttttgaagggtggttagaggttactcatgtatacggtagtga 36118536  T
Q  416 ttttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttttnnnnnnntacgttgttatt 515  Q
    ||||||| ||||| ||||||||| ||||| |  || ||||||||||||||||||||||||||||||||| ||||||  |||       |||||| |||||    
T  36118535 ttttcatatttgggtgtatcacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattgttc-atttaaaaaaatacgtttttatt 36118437  T
Q  516 ttattacgggcctcttttc 534  Q
    |||||||| ||||||||||    
T  36118436 ttattacgagcctcttttc 36118418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 183 - 481
Target Start/End: Original strand, 40217020 - 40217327
Alignment:
Q  183 tactactaagtactaccctactaaaaacaaaa-tttctt------tttctctctgatacca--tgcgttccatcaccatcactccatcggactttccnnn 273  Q
    ||||||||| |||||||| ||||||||||||| ||||||      ||||||||| ||| ||  || |||||||||||||||||||||| ||||||||       
T  40217020 tactactaaatactaccccactaaaaacaaaaatttcttattctctttctctctaatatcacatgtgttccatcaccatcactccatcagactttccttt 40217119  T
Q  274 nnnncttctccgatttgatttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggt--gtgtann 371  Q
        |||| ||||||||||||| |||||||| |  |||||||||||||||||||||  |||||||||||| | ||||||||||||||||||  || ||      
T  40217120 tcttcttccccgatttgatttctttttcctcttttgttgtcttgttttaggcctat--tagaattgggtcattttgcttttggtgttaggtgagtatatt 40217217  T
Q  372 nnnnngggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaa 471  Q
         || |||||||||||||||| |||||||||    || ||||||||||||||||||||||| || ||||| |  || || |||||||||||||||||    
T  40217218 tttttggaagggtggtttgaggttactcatgtatatgctaatgattttcatctttggatgtatcgcatatatacgacaccttatatttatcttttaaaaa 40217317  T
Q  472 atttaaatag 481  Q
    ||||||||||    
T  40217318 atttaaatag 40217327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 105 - 484
Target Start/End: Original strand, 15734807 - 15735188
Alignment:
Q  105 gaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaataa---tataggccggtaatactactaagtactaccct 201  Q
    ||||||||| | ||||||||| | |||||||| || |||| ||||||||||||||| ||||| ||   ||||  |  ||| ||||||||||||||||||     
T  15734807 gaccttgggatgtgcaaggagctgaatggaaccggacctccccaaggtatgggcctcaaaaaaaaaattataaccaagtagtactactaagtactacccc 15734906  T
Q  202 actaaaaacaaaattt-------ctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgattt 294  Q
    |||||||||||| |||       |||||||||| |||||||| |||||||||||| |||||| ||| |||| |||        |||||||||||||||||    
T  15734907 actaaaaacaaattttttttattctttttctctttgataccacgcgttccatcactatcacttcattggacattcgttttcttcttctccgatttgattt 15735006  T
Q  295 ccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggt 394  Q
    |||||||||| || |||  |||||||||||||| |  |||||||||||| ||||||||||||||||||||| |          |||||||||||||| ||    
T  15735007 ccttttcctcttctgttcacttgttttaggcctgt--tagaattgggtcttcttgcttttggtgttaggtg-gatgtttttttggagggtggtttgaagt 15735103  T
Q  395 tcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 484  Q
    ||||||||||| |  || |||||||||| ||| | |||||     ||||| |     |||||||||||||||||||||||||||||||||    
T  15735104 tcctcatgtatacggtaatgattttcattttttggtgtat-----atatacgacgtcttgtatttatcttttaaaaaatttaaatagaac 15735188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 188 - 365
Target Start/End: Complemental strand, 37747028 - 37746849
Alignment:
Q  188 ctaagtactaccctactaaaaacaaaatttctt------tttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttc 281  Q
    ||||||||||||| |||||||||||| ||||||      |||||||||||||||| || | ||||||||||||||||||||||||||||       ||||    
T  37747028 ctaagtactaccccactaaaaacaaa-tttcttattatctttctctctgataccacgcataccatcaccatcactccatcggactttccttttcttcttc 37746930  T
Q  282 tccgatttgatttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
     ||||||||||||| |||||||| || |||||||||||||||||||||  |||||||||||| |||||||||||||||||||||    
T  37746929 -ccgatttgatttctttttcctcttctgttgtcttgttttaggcctat--tagaattgggtcatcttgcttttggtgttaggtg 37746849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 300 - 534
Target Start/End: Complemental strand, 39329583 - 39329351
Alignment:
Q  300 tcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctc 399  Q
    ||||| || |||||||||||||||||||||||  ||||| |||| ||||||||||||||||| ||| ||        ||||||||||||||| |||||||    
T  39329583 tcctcttctgttgtcttgttttaggcctatta--gaatttggtcttcttgcttttggtgttatgtgggtgtttttttgggagggtggtttgatgttcctc 39329486  T
Q  400 atgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttttnnn 499  Q
     ||||| |  ||  ||||||||||||||| ||||||||| |||||    || ||||||||||||||||||||||||||| ||||| ||||||||||        
T  39329485 ctgtatacggtatggattttcatctttgggtgtatcacatatatacaacaccttgtatttatcttttaaaaaatttaaagagaacattgttcttttaaaa 39329386  T
Q  500 nnnntacgttgttattttattacgggcctcttttc 534  Q
        || ||| |||||||||||||| |||||||||    
T  39329385 aaaatatgtttttattttattacggacctcttttc 39329351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 231 - 483
Target Start/End: Complemental strand, 2135578 - 2135331
Alignment:
Q  231 ataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcagttgtcttgttttaggcctatt 330  Q
    |||||||| |||| |||| |||||||||||| ||||||||       |||| ||||||||||||| |||| ||| |  ||| ||||||||||||| ||||    
T  2135578 ataccatgtgttcaatcatcatcactccatcagactttccttttcttcttccccgatttgatttcatttttctcttttgttatcttgttttaggcttatt 2135479  T
Q  331 atagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggat 430  Q
    |  |||||||||||||||||||||||||||||||  ||         ||||    |||||||||||||||| ||| | |||||||| || | ||||||||    
T  2135478 a--gaattgggtcctcttgcttttggtgttaggtcagtgttttttttggag---tgtttgaggttcctcatatatacgatagtgatgtttacctttggat 2135384  T
Q  431 gtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaa 483  Q
    ||||| || ||||| |  || ||||||||||||||||||||||||||||||||    
T  2135383 gtatcgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaa 2135331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 216 - 495
Target Start/End: Original strand, 24396769 - 24397043
Alignment:
Q  216 ttctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcagttgtct 315  Q
    |||| |||||||||||||| | ||||||||||||||||||||  ||  ||||| |       ||||  | ||||||||||||||||||| |  |||||||    
T  24396769 ttctctttctctctgatactaagcgttccatcaccatcactctctcatacttttcttttcttcttc--caatttgatttccttttcctcttttgttgtct 24396866  T
Q  316 tgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaatagtga 415  Q
    ||||||| || |||||  |||||| || ||||||||||||||||||| ||  |        || ||||| |||||||||||||||||||| | |||||||    
T  24396867 tgttttaagcatatta--gaattgagttctcttgcttttggtgttagatggatttttttttgg-agggtagtttgaggttcctcatgtatacgatagtga 24396963  T
Q  416 ttttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttt 495  Q
    |||||| |||||  ||||||||| |||||  | || || |||||||||||||||||||||||||| ||  ||||||||||    
T  24396964 ttttcacctttgagtgtatcacatatatactgcaccttatatttatcttttaaaaaatttaaataaaatattgttctttt 24397043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 211 - 492
Target Start/End: Original strand, 36178498 - 36178778
Alignment:
Q  211 aaaatttctttttctctctgataccatgcgttccatcaccatcactccatcggacttt-ccnnnnnnncttctccgatttgatttccttttcctcgtca- 308  Q
    |||| |||| |||||| || |||||| |||||||||||| |||||||||| ||  ||| ||       |||| | ||||||||||| |||||||| ||      
T  36178498 aaaaattctctttctccctaataccacgcgttccatcacaatcactccataggggttttccttttcttcttccctgatttgatttcattttcctcttccc 36178597  T
Q  309 gttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattca 408  Q
    |||||||||||||||||| ||||  |||| ||||||||||||||||||||||||||| ||        |||||||||||||| | ||| ||||||||       
T  36178598 gttgtcttgttttaggcccatta--gaatcgggtcctcttgcttttggtgttaggtgagtgtttttttgggagggtggtttg-gattcttcatgtataag 36178694  T
Q  409 atagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttct 492  Q
     ||||||||||||  ||||| |||||| || ||||| |  || |||||||||||||||||| |||||||||||||| |||||||    
T  36178695 gtagtgattttcacatttgggtgtatcgcatatatacgacaccttgtatttatcttttaaataatttaaatagaacattgttct 36178778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 285 - 495
Target Start/End: Complemental strand, 36363076 - 36362869
Alignment:
Q  285 gatttgatttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggt 384  Q
    ||||||||||| |||||||| |||||||||||||||||| |||||  |||||||| ||| ||| |||||||||||| |||| ||        | ||||||    
T  36363076 gatttgatttcattttcctcttcagttgtcttgttttagacctat--tagaattgagtcatctcgcttttggtgttgggtgggtgctttgttgagagggt 36362979  T
Q  385 ggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 484  Q
    |||||||||||||| ||||||    ||||||||| ||  ||||| |||||  || ||||| || || ||||||||||||||||||||||||||| ||| |    
T  36362978 ggtttgaggttcct-atgtatatggtagtgatttccacatttgggtgtattgcatatatacggcactttgtatttatcttttaaaaaatttaaacagagc 36362880  T
Q  485 gttgttctttt 495  Q
     ||||||||||    
T  36362879 attgttctttt 36362869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 2790842 - 2790739
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||||||||||| |  |||| ||||||| |||||| |||| | || ||||| ||||| || ||||||||||||||||||| |||||||||| ||||||    
T  2790842 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggtaccttatatttatcttttaaaaaatataaatagaacattgttc 2790743  T
Q  492 tttt 495  Q
    ||||    
T  2790742 tttt 2790739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 495
Target Start/End: Complemental strand, 10042113 - 10041998
Alignment:
Q  380 agggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaat 479  Q
    |||||| ||||||||||||| ||||| |  ||||||||||||  ||| | ||||||||| | ||| || || |||||||||| |||| ||||||||||||    
T  10042113 agggtgatttgaggttcctcctgtatacggtagtgattttcacatttaggtgtatcacatacatacggcaccttgtatttatttttttaaaaatttaaat 10042014  T
Q  480 agaacgttgttctttt 495  Q
    ||||| ||||||||||    
T  10042013 agaacattgttctttt 10041998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 377 - 490
Target Start/End: Original strand, 45656166 - 45656279
Alignment:
Q  377 gggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaattta 476  Q
    |||||||||||||||||||| |||||||| |  | ||||||||||  ||||||| |||| || ||||| |  || ||| |||||||||||||||||||||    
T  45656166 gggagggtggtttgaggttcgtcatgtatacgttcgtgattttcacatttggatttatcgcatatatatgacaccttgcatttatcttttaaaaaattta 45656265  T
Q  477 aatagaacgttgtt 490  Q
    |||| ||| |||||    
T  45656266 aataaaacattgtt 45656279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 382 - 473
Target Start/End: Complemental strand, 4168002 - 4167911
Alignment:
Q  382 ggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaat 473  Q
    |||| |||||||||||||||||||    |||||||||||| |||||| |||||| || ||||| || || ||||||||||||||||||||||    
T  4168002 ggtgatttgaggttcctcatgtataaggtagtgattttcacctttgggtgtatcgcatatatacggcaccttgtatttatcttttaaaaaat 4167911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 382 - 484
Target Start/End: Complemental strand, 37745021 - 37744918
Alignment:
Q  382 ggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatctttt-aaaaaatttaaata 480  Q
    ||||||||||||||||||| |||| |  |||||||||||| ||||||||||||| || ||||  |  || || |||||||||||| ||||||||||||||    
T  37745021 ggtggtttgaggttcctcaagtatacggtagtgattttcacctttggatgtatcgcatatatgcgacaccttatatttatcttttaaaaaaatttaaata 37744922  T
Q  481 gaac 484  Q
    ||||    
T  37744921 gaac 37744918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 413 - 496
Target Start/End: Complemental strand, 39655334 - 39655251
Alignment:
Q  413 tgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttcttttt 496  Q
    ||||||||| |||||| |||| | || ||||  || || ||||||||||||||||||||||||||||||||| |||||||||||    
T  39655334 tgattttcacctttgggtgtaccgcatatatgcggaactttgtatttatcttttaaaaaatttaaatagaacattgttcttttt 39655251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 54780783 - 54780886
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||||||||||| |  |||| ||||||| |||||| |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||| ||    
T  54780783 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 54780882  T
Q  492 tttt 495  Q
    ||||    
T  54780883 tttt 54780886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 95 - 267
Target Start/End: Complemental strand, 4168268 - 4168097
Alignment:
Q  95 agcaaggccggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaataa--tataggccggtaatactactaag 192  Q
    |||||||||| ||||| |||| |||||||||||||||| ||  ||| |||  |||||||||||||||||||| ||  ||||  || | | ||||||||||    
T  4168268 agcaaggccgaaccttagggtgtgcaaggagttcaatgaaatcgggtctcttcaaggtatgggcctaaaaaaaaaattatatcccagcagtactactaag 4168169  T
Q  193 tactaccctactaaaaacaaaatttctttttctctctgataccatgcgttccatcaccatcactccatcggactt 267  Q
    |||||||| | |||||| |||| | | | ||||||    |  || |||||||||||||||||||||||| |||||    
T  4168168 tactaccccattaaaaaaaaaaatccatattctct---ttctcacgcgttccatcaccatcactccatctgactt 4168097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 495
Target Start/End: Complemental strand, 51692078 - 51691913
Alignment:
Q  332 tagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaatagtgattttca--tctttgga 429  Q
    ||||||||| || |||||||||| |||||||||| ||         ||||||||||||||||||| || |||||    ||||||||||||  | ||| |     
T  51692078 tagaattggatcatcttgcttttagtgttaggtgagtgtttttttcggagggtggtttgaggttcatcgtgtatatggtagtgattttcactttttttgg 51691979  T
Q  430 tgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttt 495  Q
    |||| | || ||||| || || ||||||||||||||||||||||||||||||||| ||| ||||||    
T  51691978 tgtaccgcatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacattgctctttt 51691913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 43455632 - 43455529
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||||||||||| |  |||| ||||||| |||||| |||| | || ||||| || || || ||||||||||||||||||| |||||||||| ||| ||    
T  43455632 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctc 43455533  T
Q  492 tttt 495  Q
    ||||    
T  43455532 tttt 43455529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 47128993 - 47129096
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||||||||||| |  |||| ||||| | || ||| |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||||||    
T  47128993 ggttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgttc 47129092  T
Q  492 tttt 495  Q
    ||||    
T  47129093 tttt 47129096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 452 - 494
Target Start/End: Original strand, 24614019 - 24614061
Alignment:
Q  452 ttgtatttatcttttaaaaaatttaaatagaacgttgttcttt 494  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  24614019 ttgtatttatcttttaaaaaatttaaatagaacattgttcttt 24614061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 453 - 495
Target Start/End: Complemental strand, 30507162 - 30507120
Alignment:
Q  453 tgtatttatcttttaaaaaatttaaatagaacgttgttctttt 495  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  30507162 tgtatttatcttttaaaaaatttaaatagaacattgttctttt 30507120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 392 - 494
Target Start/End: Complemental strand, 38209692 - 38209590
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||||||||||| |  |||| ||||||| || ||| |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||| ||    
T  38209692 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 38209593  T
Q  492 ttt 494  Q
    |||    
T  38209592 ttt 38209590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 309 - 365
Target Start/End: Complemental strand, 30507254 - 30507200
Alignment:
Q  309 gttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||||||||||| |  |||||| |||||||||||||||||||||||||    
T  30507254 gttgtcttgttttaggcctataa--gaattgagtcctcttgcttttggtgttaggtg 30507200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 19498510 - 19498611
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||||||||||| || |||| ||||||| |||||| |||| | ||  |||| || || || ||||||||||||||||||| |||||||||| ||| ||    
T  19498510 ggttcctcatgtatacagtagtcattttcacctttggctgtaccgca--tatacggcaccttatatttatcttttaaaaaatataaatagaacattgctc 19498607  T
Q  492 tttt 495  Q
    ||||    
T  19498608 tttt 19498611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 392 - 484
Target Start/End: Complemental strand, 37777324 - 37777232
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 484  Q
    |||||||||||||| |  |||| ||||||| |||||| |||| | || ||||| || || || ||||||||||||||||||| ||||||||||    
T  37777324 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaac 37777232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 392 - 496
Target Start/End: Complemental strand, 54083343 - 54083239
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||||||||||| |  |||| ||||| |||||||| |||| | || ||||| || || || ||||||||||||||||||| |||||||| | |||||     
T  54083343 ggttcctcatgtatacggtagtcatttttatctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagatcattgttt 54083244  T
Q  492 ttttt 496  Q
    |||||    
T  54083243 ttttt 54083239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 392 - 534
Target Start/End: Original strand, 34027585 - 34027727
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||||||||||| |  |||| ||||||| |||||| |||| | || ||||| |  || || ||||||||||||||||||| |||||||||| ||| |     
T  34027585 ggttcctcatgtataccgtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagaacattgctt 34027684  T
Q  492 tttttnnnnnnntacgttgttattttattacgggcctcttttc 534  Q
    |||||       |||||| | ||||||| || |||||||||||    
T  34027685 tttttaaaaaaatacgttttgattttatcactggcctcttttc 34027727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 424 - 480
Target Start/End: Complemental strand, 11906960 - 11906904
Alignment:
Q  424 tttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaata 480  Q
    |||||||||| |||| ||||| ||||| ||||||||||||||  |||||||||||||    
T  11906960 tttggatgtaccacatatatacggtaccttgtatttatctttataaaaatttaaata 11906904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 365
Target Start/End: Complemental strand, 16882544 - 16882499
Alignment:
Q  318 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  16882544 ttttaggcctatta--gaattaggtcctcttgcttttggtgttaggtg 16882499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 365
Target Start/End: Original strand, 19498462 - 19498507
Alignment:
Q  318 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  19498462 ttttaggcctatta--gaattaggtcctcttgcttttggtgttaggtg 19498507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 365
Target Start/End: Original strand, 32128542 - 32128587
Alignment:
Q  318 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  32128542 ttttaggcctatta--gaattaggtcctcttgcttttggtgttaggtg 32128587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 392 - 484
Target Start/End: Original strand, 32915391 - 32915483
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 484  Q
    |||||||||||||| |  || | ||||| | || ||| |||| |||| ||||| || || |||||||||||||||||||||| ||||||||||    
T  32915391 ggttcctcatgtatacggtaatcatttttacctctgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 32915483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 365
Target Start/End: Original strand, 34027537 - 34027582
Alignment:
Q  318 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  34027537 ttttaggcctatta--gaattaggtcctcttgcttttggtgttaggtg 34027582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 365
Target Start/End: Original strand, 40089474 - 40089519
Alignment:
Q  318 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  40089474 ttttaggcctatta--gaattaggtcctcttgcttttggtgttaggtg 40089519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 452 - 495
Target Start/End: Complemental strand, 9578705 - 9578662
Alignment:
Q  452 ttgtatttatcttttaaaaaatttaaatagaacgttgttctttt 495  Q
    |||||||||||||||||||||| |||||||||| ||| ||||||    
T  9578705 ttgtatttatcttttaaaaaatataaatagaacattgctctttt 9578662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 452 - 495
Target Start/End: Original strand, 10978966 - 10979009
Alignment:
Q  452 ttgtatttatcttttaaaaaatttaaatagaacgttgttctttt 495  Q
    |||||||||||||||||||||| |||||||||| ||| ||||||    
T  10978966 ttgtatttatcttttaaaaaatataaatagaacattgctctttt 10979009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 34768675 - 34768572
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||||||||||| |  || | ||||||| || ||| |||| | || ||||| || || || ||||||||||||||||||| |||||||||| ||| ||    
T  34768675 ggttcctcatgtatacggtaatcattttcacctctgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctc 34768576  T
Q  492 tttt 495  Q
    ||||    
T  34768575 tttt 34768572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 471
Target Start/End: Original strand, 40089522 - 40089601
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaa 471  Q
    |||||||||||||| |  |||| ||||||| ||||||||||| | || ||||| || || || |||||||||||||||||    
T  40089522 ggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaa 40089601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 452 - 495
Target Start/End: Original strand, 48209306 - 48209349
Alignment:
Q  452 ttgtatttatcttttaaaaaatttaaatagaacgttgttctttt 495  Q
    |||||||||||||||||||||| |||||||||| ||| ||||||    
T  48209306 ttgtatttatcttttaaaaaatataaatagaacattgctctttt 48209349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 54083391 - 54083347
Alignment:
Q  318 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggt 364  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||||    
T  54083391 ttttaggcctatta--gaattaggtcctcttgcttttggtgttaggt 54083347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 216 - 270
Target Start/End: Complemental strand, 39329679 - 39329625
Alignment:
Q  216 ttctttttctctctgataccatgcgttccatcaccatcactccatcggactttcc 270  Q
    |||| |||||||||||||||| |||||| |||| |||||||| ||| ||||||||    
T  39329679 ttctctttctctctgataccacgcgttctatcatcatcactcaatcagactttcc 39329625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 483
Target Start/End: Complemental strand, 5128945 - 5128852
Alignment:
Q  390 gaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaa 483  Q
    |||||||||||||||| |  |||| ||||||| || ||| || |   || ||||| || || |||||||||||||||||||||| |||||||||    
T  5128945 gaggttcctcatgtatacggtagtcattttcacctctgggtgcactgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaa 5128852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 365
Target Start/End: Original strand, 22077110 - 22077164
Alignment:
Q  309 gttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||| ||||||| |||||||  |||||| |||||| ||||||||||||||||||    
T  22077110 gttgtctggttttagacctatta--gaattgagtcctcatgcttttggtgttaggtg 22077164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 495
Target Start/End: Original strand, 32128608 - 32128693
Alignment:
Q  410 tagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttt 495  Q
    |||| ||||||| |||||| |||| | || ||||| |  || || ||||||||||||||||||| |||||||||| ||| ||||||    
T  32128608 tagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagaacattgctctttt 32128693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 452 - 484
Target Start/End: Original strand, 1105598 - 1105630
Alignment:
Q  452 ttgtatttatcttttaaaaaatttaaatagaac 484  Q
    |||||||||||||||||||||| ||||||||||    
T  1105598 ttgtatttatcttttaaaaaatataaatagaac 1105630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 452 - 484
Target Start/End: Complemental strand, 10428238 - 10428206
Alignment:
Q  452 ttgtatttatcttttaaaaaatttaaatagaac 484  Q
    |||||||||||||||||||||| ||||||||||    
T  10428238 ttgtatttatcttttaaaaaatataaatagaac 10428206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 452 - 484
Target Start/End: Original strand, 13460273 - 13460305
Alignment:
Q  452 ttgtatttatcttttaaaaaatttaaatagaac 484  Q
    |||||||||||||||||||||| ||||||||||    
T  13460273 ttgtatttatcttttaaaaaatataaatagaac 13460305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 365
Target Start/End: Original strand, 16844979 - 16845024
Alignment:
Q  318 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||||  ||||| |||| |||||||||||||||||||||    
T  16844979 ttttaggcctatta--gaattaggtcatcttgcttttggtgttaggtg 16845024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 495
Target Start/End: Complemental strand, 16922367 - 16922327
Alignment:
Q  455 tatttatcttttaaaaaatttaaatagaacgttgttctttt 495  Q
    ||||||||||||||||||| |||||||||| ||| ||||||    
T  16922367 tatttatcttttaaaaaatataaatagaacattgctctttt 16922327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 365
Target Start/End: Original strand, 24969395 - 24969440
Alignment:
Q  318 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||||  ||||| | ||||||||||||||||||||||||    
T  24969395 ttttaggcctatta--gaattagatcctcttgcttttggtgttaggtg 24969440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 452 - 484
Target Start/End: Original strand, 37514725 - 37514757
Alignment:
Q  452 ttgtatttatcttttaaaaaatttaaatagaac 484  Q
    |||||||||||||||||||||| ||||||||||    
T  37514725 ttgtatttatcttttaaaaaatataaatagaac 37514757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 365
Target Start/End: Complemental strand, 38352404 - 38352359
Alignment:
Q  318 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||||  ||||| |||| |||||||||||||||||||||    
T  38352404 ttttaggcctatta--gaattaggtcatcttgcttttggtgttaggtg 38352359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 269
Target Start/End: Complemental strand, 50677288 - 50677231
Alignment:
Q  216 ttctttttctctctgataccat----gcgttccatcaccatcactccatcggactttc 269  Q
    |||| |||||||||||||||||    || ||||||||||||||||||||||| |||||    
T  50677288 ttctctttctctctgataccatccacgcattccatcaccatcactccatcggtctttc 50677231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 111; Significance: 9e-56; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 103 - 491
Target Start/End: Complemental strand, 2477976 - 2477587
Alignment:
Q  103 cggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaataat-ataggccggtaatactactaagtactaccct 201  Q
    ||||||||| ||| ||||||||| |||||| ||| ||||||| |||||| ||||| |||||||| | | |||| || ||| ||||||||||||||||||     
T  2477976 cggaccttgaggtgtgcaaggagctcaatgcaaccgggcctccccaaggcatgggtctaaaaaaaagttatagcccagtagtactactaagtactacccc 2477877  T
Q  202 actaaaaacaaaat-----ttctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttcc 296  Q
    | ||||||  ||||     |||| ||| |||||||||||| || |||| ||||||||||||| || ||||||||       |||||| ||||||||||||    
T  2477876 attaaaaa--aaatccttattctctttatctctgataccacgctttccttcaccatcactccgtcagactttccttttcttcttctctgatttgatttcc 2477779  T
Q  297 ttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttc 396  Q
    |||||||| |  ||| ||||||||||| |||||||  |||||| |||||||||||||| |||||||||| ||        ||||||||||||||||||||    
T  2477778 ttttcctcttttgttttcttgttttag-cctatta--gaattgagtcctcttgctttttgtgttaggtgggtgtttttctgggagggtggtttgaggttc 2477682  T
Q  397 ctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    ||||||||| |  ||||||||||||  ||| | |||||| || ||||| |  || |||||||||||||||||||||||||||| |||| ||||||    
T  2477681 ctcatgtatacggtagtgattttcacattttggtgtatcgcatatatatgtcaccttgtatttatcttttaaaaaatttaaattgaacattgttc 2477587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 216 - 484
Target Start/End: Original strand, 20611620 - 20611886
Alignment:
Q  216 ttctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcagttgtct 315  Q
    |||| ||||||| ||||| || |||||||||||||||  ||||||| ||||||||       |||| ||||||||||||| |||||||| |  |||||||    
T  20611620 ttctctttctctatgatatcaagcgttccatcaccattgctccatcagactttccttttcttcttccccgatttgatttctttttcctcttttgttgtct 20611719  T
Q  316 tgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaatagtga 415  Q
    ||||||||||||||  |||||||||||| | || |||||||||||||||| ||        |||||||| |||||||||||||||||||| |  ||||||    
T  20611720 tgttttaggcctat--tagaattgggtcattttacttttggtgttaggtgagtgtttttttgggagggtagtttgaggttcctcatgtatacggtagtga 20611817  T
Q  416 ttttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 484  Q
    |||||| |||||||||| ||  | ||||| |  || ||||||||||| |||||||||||||| ||||||    
T  20611818 ttttcacctttggatgtgtcgtatatatacgacaccttgtatttatcgtttaaaaaatttaagtagaac 20611886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 381 - 483
Target Start/End: Complemental strand, 21183788 - 21183686
Alignment:
Q  381 gggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaata 480  Q
    ||||||||||||||||||||||||| |  |||||||||||| |||||| |||| |||| ||||| | ||| |||||||||||||||||||||||||||||    
T  21183788 gggtggtttgaggttcctcatgtatacggtagtgattttcaactttgggtgtaccacatatatacgctactttgtatttatcttttaaaaaatttaaata 21183689  T
Q  481 gaa 483  Q
    |||    
T  21183688 gaa 21183686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 491
Target Start/End: Original strand, 6159430 - 6159541
Alignment:
Q  380 agggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaat 479  Q
    ||||||||||||||||||| || ||| |  ||||||||| || ||||| ||||| | || ||||| |  ||||||||||||||||||||||||| |||||    
T  6159430 agggtggtttgaggttccttatatatacggtagtgatttccacctttgaatgtaccgcatatatacgacacattgtatttatcttttaaaaaatataaat 6159529  T
Q  480 agaacgttgttc 491  Q
    ||||| ||||||    
T  6159530 agaacattgttc 6159541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 410 - 494
Target Start/End: Original strand, 30121784 - 30121868
Alignment:
Q  410 tagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttcttt 494  Q
    |||||||||||| ||||||||||||| || ||||| |  || |||||||||| |||||||||||||||||| ||| |||||||||    
T  30121784 tagtgattttcacctttggatgtatcgcatatatatgacaccttgtatttattttttaaaaaatttaaataaaacattgttcttt 30121868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 392 - 484
Target Start/End: Original strand, 28075787 - 28075879
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 484  Q
    |||||||||||||| |  |||| ||||||| |||||| |||||| || ||||| || || || ||||||||||||||||||| ||||||||||    
T  28075787 ggttcctcatgtatacggtagtcattttcacctttgggtgtatcgcatatatacggcaccttatatttatcttttaaaaaatataaatagaac 28075879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 13727501 - 13727398
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||||||||||| |  |||| ||||||| || ||| |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||| ||    
T  13727501 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 13727402  T
Q  492 tttt 495  Q
    ||||    
T  13727401 tttt 13727398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 20711822 - 20711719
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||||||||||| |  |||| ||||||| |||||| |||| | || ||||| || || || ||||||||||||||||||| |||||||||| ||| ||    
T  20711822 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctc 20711723  T
Q  492 tttt 495  Q
    ||||    
T  20711722 tttt 20711719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 21479498 - 21479601
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||||||||||| |  |||| ||||||| || ||| |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||| ||    
T  21479498 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 21479597  T
Q  492 tttt 495  Q
    ||||    
T  21479598 tttt 21479601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 392 - 484
Target Start/End: Complemental strand, 24711101 - 24711009
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 484  Q
    |||||||||||||| |  |||| ||||||| || ||  |||| |||| ||||| || || |||||||||||||||||||||| ||||||||||    
T  24711101 ggttcctcatgtatacggtagtcattttcacctctgagtgtaccacatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 24711009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 392 - 484
Target Start/End: Original strand, 33774121 - 33774213
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 484  Q
    |||||||||||||| |  |||| |||||||  ||||| |||| | || ||||| || || |||||||||||||||||||||| ||||||||||    
T  33774121 ggttcctcatgtatacggtagtcattttcacatttgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 33774213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 335 - 471
Target Start/End: Original strand, 4036895 - 4037031
Alignment:
Q  335 aattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtat 434  Q
    ||||||||| ||||||||||||||||||||| ||         |||||||||||||| ||||||||| ||| |  ||||||| || | |||||| ||||     
T  4036895 aattgggtcatcttgcttttggtgttaggtgagtgttttttttggagggtggtttgaagttcctcatatatacggtagtgatctttacctttgggtgtac 4036994  T
Q  435 cacacatataaggtacattgtatttatcttttaaaaa 471  Q
    || | ||||| || || |||||||||||| |||||||    
T  4036995 catatatatacggcaccttgtatttatctcttaaaaa 4037031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 392 - 483
Target Start/End: Complemental strand, 27788790 - 27788699
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaa 483  Q
    |||||||||||||| |  |||| ||||||| |||||| |||| | || ||||| || || || ||||||||||||||||||| |||||||||    
T  27788790 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaa 27788699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 494
Target Start/End: Complemental strand, 1155947 - 1155849
Alignment:
Q  396 cctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttcttt 494  Q
    |||||||||| |  |||| ||||||| || |||||||| | || ||||| |  || |||||||||||||||||||||| |||||||||| ||| |||||    
T  1155947 cctcatgtatacggtagtcattttcacctctggatgtaccgcatatatatgacaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 1155849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 495
Target Start/End: Original strand, 21280550 - 21280652
Alignment:
Q  393 gttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttct 492  Q
    ||||||||||||| |  |||| ||||| | || ||| |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||| |||    
T  21280550 gttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctct 21280649  T
Q  493 ttt 495  Q
    |||    
T  21280650 ttt 21280652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 390 - 495
Target Start/End: Original strand, 34397859 - 34397964
Alignment:
Q  390 gaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgt 489  Q
    |||||||||||||| | | ||||| ||||| | |||| | |||| | || ||||| |  || |||||||||||||||||||||| |||||||||| |||     
T  34397859 gaggttcctcatgtttacgatagtcatttttacctttaggtgtaccgcatatatacgtcaccttgtatttatcttttaaaaaatataaatagaacattgc 34397958  T
Q  490 tctttt 495  Q
    ||||||    
T  34397959 tctttt 34397964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 103 - 174
Target Start/End: Original strand, 20611510 - 20611582
Alignment:
Q  103 cggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcct-aaaaaataatatag 174  Q
    ||||||||||||| ||||| ||| |||||||| ||||||||| | |||||||||| || |||||| |||||||    
T  20611510 cggaccttggggtgtgcaaagagctcaatggagctgggcctccctaaggtatgggtctaaaaaaaaaatatag 20611582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 310 - 361
Target Start/End: Original strand, 30121698 - 30121747
Alignment:
Q  310 ttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgtta 361  Q
    ||||||||||||||| ||||||  |||| |||||||||||||||||||||||    
T  30121698 ttgtcttgttttaggtctatta--gaatcgggtcctcttgcttttggtgtta 30121747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 392 - 484
Target Start/End: Complemental strand, 30832626 - 30832534
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 484  Q
    ||||||||||| || |  |||| |||||||||| ||| |||| |||| ||||| || |  |||||||||| ||||||||||| ||||||||||    
T  30832626 ggttcctcatgcatacggtagtcattttcatctctgggtgtaccacatatatacggcatcttgtatttattttttaaaaaatgtaaatagaac 30832534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 19737794 - 19737691
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||||||||||| |  |||| ||||||| || | | |||| | || ||||| || || |||||||||||||| ||||||| |||||||||| ||| ||    
T  19737794 ggttcctcatgtatacggtagtcattttcacctctaggtgtaccgcatatatacggcaccttgtatttatctttaaaaaaatataaatagaacattgctc 19737695  T
Q  492 tttt 495  Q
    ||||    
T  19737694 tttt 19737691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 206
Target Start/End: Original strand, 4036783 - 4036896
Alignment:
Q  94 gagcaaggccggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcct-aaaaaataatataggccggtaatactactaag 192  Q
    ||||| || ||||||||||||| |||||   | ||||||||  |||||||| |||| ||||| |||| |||||| | ||||| || ||| ||||||||||    
T  4036783 gagcagggtcggaccttggggtgtgcaaaacgctcaatggagttgggcctccccaatgtatgagcctcaaaaaaaattatagcccagtagtactactaag 4036882  T
Q  193 tactaccctactaa 206  Q
    ||||| || |||||    
T  4036883 tactatcccactaa 4036896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 365
Target Start/End: Original strand, 17353922 - 17353955
Alignment:
Q  332 tagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||| ||||||||||||||||||||||||||    
T  17353922 tagaattaggtcctcttgcttttggtgttaggtg 17353955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 392 - 484
Target Start/End: Original strand, 17353958 - 17354050
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 484  Q
    ||||| |||||||| | ||||| |||||||  ||||| |||| | || ||||| |  || || ||||||||||||||||||| ||||||||||    
T  17353958 ggttcatcatgtatacgatagtcattttcacatttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagaac 17354050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 365
Target Start/End: Original strand, 19987117 - 19987162
Alignment:
Q  318 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||||  ||||| |||| |||||||||||||||||||||    
T  19987117 ttttaggcctatta--gaattaggtcatcttgcttttggtgttaggtg 19987162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 111; Significance: 9e-56; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 107 - 495
Target Start/End: Original strand, 26279254 - 26279649
Alignment:
Q  107 ccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaataat-ataggccggtaatactactaagtactaccctacta 205  Q
    |||| |||| ||||||||| ||| |||| ||||||||| ||| |||||| | |||||||| ||| ||||  | ||| ||||||||| |||||| | ||||    
T  26279254 ccttagggtgtgcaaggagctcactggagctgggcctccccagggtatgagtctaaaaaaaaattatagctcagtagtactactaaatactactccacta 26279353  T
Q  206 aaaacaaaatttctt------tttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttt 299  Q
    || |||||||| |||      ||||||||||||||||  ||||||||||||||||||||| |  |||||||       | || ||||||||||||| |||    
T  26279354 aacacaaaattccttattctctttctctctgataccacacgttccatcaccatcactccaacaaactttccttttcttcatccccgatttgatttcattt 26279453  T
Q  300 tcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctc 399  Q
    ||||| ||  |||||||||||||||||||||| |  |||||||| | ||||||||||||||||||| ||        |||||||||||||||||||||||    
T  26279454 tcctcttctattgtcttgttttaggcctattaaa--attgggtcatgttgcttttggtgttaggtgggtgtttttttgggagggtggtttgaggttcctc 26279551  T
Q  400 atgtat--tcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttt 495  Q
    ||||||  |   ||||||||||||||||||| |||||  || ||||| |  || || |||||||||||||||||||||||||||||| ||||||||||    
T  26279552 atgtataatgtgtagtgattttcatctttgggtgtattgcatatatacgacaccttctatttatcttttaaaaaatttaaatagaacattgttctttt 26279649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 278 - 484
Target Start/End: Complemental strand, 28689574 - 28689371
Alignment:
Q  278 cttctccgatttgatttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnng 377  Q
    |||| ||||||||||||| || ||||| || |||||||||||||| ||||||  ||||||||| || ||||||||||||||||||||| ||        |    
T  28689574 cttccccgatttgatttctttctcctcttctgttgtcttgttttaagcctat--tagaattggatcatcttgcttttggtgttaggtgggt-gttttttg 28689478  T
Q  378 ggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaa 477  Q
    ||||||| ||||||| || ||||||||| |   ||||||||||| |||||||| |||| || ||||| || || |||||||||||||||  |||||||||    
T  28689477 ggagggtagtttgagatttctcatgtatacggcagtgattttcacctttggatatatcgcatatatacggcaccttgtatttatctttttgaaaatttaa 28689378  T
Q  478 atagaac 484  Q
    |||||||    
T  28689377 atagaac 28689371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 222 - 495
Target Start/End: Original strand, 52374500 - 52374763
Alignment:
Q  222 ttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcagttgtcttgtttt 321  Q
    |||| |||||||||| |||||||||||||||||||  ||| ||||||||       |||| || ||||||||||||||||       |||||||||||||    
T  52374500 ttctttctgataccacgcgttccatcaccatcactttatcagactttccttttcttcttccccaatttgatttccttttct------gttgtcttgtttt 52374593  T
Q  322 aggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaatagtgattttca 421  Q
    ||||||||||  |||||| ||||||||||||||||||||||||| ||        |||| |||||| |||||||| |||||||| |  |||||||||||     
T  52374594 aggcctatta--gaattgagtcctcttgcttttggtgttaggtgggt-gttttttggga-ggtggtatgaggttcttcatgtatacggtagtgattttct 52374689  T
Q  422 tctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttt 495  Q
     |||| |||||||| ||  |||| |  ||||||||||||| |   |||||||||||||||||| ||||||||||    
T  52374690 cctttagatgtatcgcatctatacgacacattgtatttatttaaaaaaaaatttaaatagaacattgttctttt 52374763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 231 - 362
Target Start/End: Original strand, 42453257 - 42453386
Alignment:
Q  231 ataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcagttgtcttgttttaggcctatt 330  Q
    |||||| |||||||||||||||||||| ||| ||||||||       |||| ||||||||||||||||||| || || |||||||||||||||||||||     
T  42453257 ataccacgcgttccatcaccatcactctatcagactttccttttcttcttccccgatttgatttccttttcttcttctgttgtcttgttttaggcctat- 42453355  T
Q  331 atagaattgggtcctcttgcttttggtgttag 362  Q
     |||||||| |||||||| |||||||||||||    
T  42453356 -tagaattgagtcctcttacttttggtgttag 42453386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 309 - 495
Target Start/End: Original strand, 8420249 - 8420433
Alignment:
Q  309 gttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattca 408  Q
    |||||||| |||||||| |||||  ||||||||| |||||||||||||||||||||| ||        || | |||||||||||||||||| | ||| |     
T  8420249 gttgtcttattttaggcatatta--gaattgggttctcttgcttttggtgttaggtgggtgtttttttggaatggtggtttgaggttcctcgtatatacg 8420346  T
Q  409 atagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttt 495  Q
      |||||||||||  ||||| ||||  ||| ||||| || || ||||||||||||||||||||||||||||||||| || |||||||    
T  8420347 gcagtgattttcacatttgggtgtacaacatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacattattctttt 8420433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 309 - 494
Target Start/End: Original strand, 49393014 - 49393195
Alignment:
Q  309 gttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattca 408  Q
    |||||||||||||||||||||||  ||||| ||||||||| |||||||||||||||| |||       |||| |||| |||||||||| |||||||| |     
T  49393014 gttgtcttgttttaggcctatta--gaattaggtcctcttacttttggtgttaggtgagtatttttttgggatggtgatttgaggttc-tcatgtatacg 49393110  T
Q  409 atagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttcttt 494  Q
     |||| ||||| | |||||| |||| |||| ||||| |   | ||||||||||||||||||||||||||| ||||| |||||||||    
T  49393111 gtagtaatttttacctttgggtgta-cacatatatacgacgccttgtatttatcttttaaaaaatttaaagagaacattgttcttt 49393195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 309 - 495
Target Start/End: Complemental strand, 54575010 - 54574826
Alignment:
Q  309 gttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattca 408  Q
    ||||| ||||||||||| |||||  |||||| ||| |||| |||||| ||||||||| ||        ||||||| |||||||||||||||||||||       
T  54575010 gttgttttgttttaggcatatta--gaattgagtcatcttacttttgttgttaggtgggtgtttttttgggagggcggtttgaggttcctcatgtatatg 54574913  T
Q  409 atagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttt 495  Q
     |||||||||| |  ||||| |||| | || ||||| ||||| |||||||||| |||| ||||||||||||||||| ||||||||||    
T  54574912 gtagtgatttttacttttgggtgtaccgcatatatacggtaccttgtatttatattttgaaaaatttaaatagaacattgttctttt 54574826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 377 - 494
Target Start/End: Original strand, 25855411 - 25855527
Alignment:
Q  377 gggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaattta 476  Q
    |||||||||||||||||||| || ||||| |  |||||||||||| |||||| || |  ||| ||||| |  || ||||||| |||||||||||||||||    
T  25855411 gggagggtggtttgaggttcttcgtgtatacggtagtgattttcaactttgggtgcactacatatatacgacaccttgtatt-atcttttaaaaaattta 25855509  T
Q  477 aatagaacgttgttcttt 494  Q
    |||||||| |||||||||    
T  25855510 aatagaacattgttcttt 25855527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 309 - 494
Target Start/End: Original strand, 789860 - 790042
Alignment:
Q  309 gttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattca 408  Q
    ||||||||||||||||||| |   |||||||||||||||| ||||| ||||||| || ||        |||  ||||||||||||||||||||||||       
T  789860 gttgtcttgttttaggccttt---agaattgggtcctcttactttttgtgttagatgagtgtttttttgggttggtggtttgaggttcctcatgtatatg 789956  T
Q  409 atagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttcttt 494  Q
     | |||||||| | |||||| ||||  ||| ||||| |  || ||||||||||  ||||||||||||||||||||  |||||||||    
T  789957 gtggtgatttttacctttgggtgtacaacatatatatgacaccttgtatttattgtttaaaaaatttaaatagaagattgttcttt 790042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 309 - 461
Target Start/End: Original strand, 29598031 - 29598179
Alignment:
Q  309 gttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattca 408  Q
    |||||||||||||||||||||||  ||||| |||| ||||||||||||||||||||| |          ||||| ||||||||| |||||||||||| |     
T  29598031 gttgtcttgttttaggcctatta--gaattaggtcatcttgcttttggtgttaggtg-gatgtttttttggaggctggtttgagattcctcatgtatacg 29598127  T
Q  409 atagtgattttcatctttggatgtatcacacatataaggtacattgtatttat 461  Q
     |||||| |||||||||||  ||||||||| ||||| || || ||||||||||    
T  29598128 gtagtga-tttcatctttgagtgtatcacatatatacggaaccttgtatttat 29598179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 392 - 484
Target Start/End: Original strand, 47467688 - 47467780
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 484  Q
    |||||||||||||| |  |||| ||||||| || ||| |||||| || ||||| || || |||||||||||||||||||||| ||||||||||    
T  47467688 ggttcctcatgtatacggtagtcattttcacctctgggtgtatcgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 47467780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 21582775 - 21582878
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||||||||||| |  |||| ||||||| || ||| |||| | || ||||| || || |||||||||||||||||||||| |||||| ||| ||||||    
T  21582775 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaataaaacattgttc 21582874  T
Q  492 tttt 495  Q
    ||||    
T  21582875 tttt 21582878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 53506986 - 53506883
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||| ||||||||| |  |||| ||||||| |||||| |||| | || ||||| ||||| || ||||||||||||||||||| |||||||||| |||||     
T  53506986 ggtttctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggtaccttatatttatcttttaaaaaatataaatagaacattgttt 53506887  T
Q  492 tttt 495  Q
    ||||    
T  53506886 tttt 53506883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 54619305 - 54619202
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||||||||||| |  |||| ||||||| || ||| |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||| ||    
T  54619305 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 54619206  T
Q  492 tttt 495  Q
    ||||    
T  54619205 tttt 54619202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 23641363 - 23641317
Alignment:
Q  449 acattgtatttatcttttaaaaaatttaaatagaacgttgttctttt 495  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||    
T  23641363 acattgtatttatcttttaaaaaatataaatagaatgttgttctttt 23641317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 393 - 495
Target Start/End: Original strand, 37168372 - 37168474
Alignment:
Q  393 gttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttct 492  Q
    ||||||||||||| |  |||| ||||||| |||||| | || |||| ||||| || || || ||||||||||||||||||| |||||||||| ||||| |    
T  37168372 gttcctcatgtatacggtagtcattttcacctttgggtataccacatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgtttt 37168471  T
Q  493 ttt 495  Q
    |||    
T  37168472 ttt 37168474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 410 - 496
Target Start/End: Complemental strand, 54407242 - 54407156
Alignment:
Q  410 tagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttcttttt 496  Q
    |||| ||||||| ||||||||||| | || ||||| || || || ||||||||||||||||||| |||||||||| ||||| |||||    
T  54407242 tagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgtttttttt 54407156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 394 - 495
Target Start/End: Complemental strand, 38681193 - 38681092
Alignment:
Q  394 ttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctt 493  Q
    |||||||||||| |  |||| ||||||| || |||||||| | || | ||| || || |||||||||||||||||||||| |||||||||| ||| ||||    
T  38681193 ttcctcatgtatacggtagtcattttcacctctggatgtaccgcatacatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctt 38681094  T
Q  494 tt 495  Q
    ||    
T  38681093 tt 38681092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 415 - 495
Target Start/End: Complemental strand, 3953975 - 3953895
Alignment:
Q  415 attttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttt 495  Q
    ||||||| || ||| |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||||||||||    
T  3953975 attttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 3953895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 494
Target Start/End: Complemental strand, 32319263 - 32319155
Alignment:
Q  386 gtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacg 485  Q
    |||||||||||||| | |||   ||||| ||||||| |||||| |||| | || |||||    || |||||||||||||||||||||||||||||||||     
T  32319263 gtttgaggttcctcgtatataagatagtaattttcacctttgggtgtaccgcatatatacaacactttgtatttatcttttaaaaaatttaaatagaaca 32319164  T
Q  486 ttgttcttt 494  Q
    || ||||||    
T  32319163 ttattcttt 32319155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 34290738 - 34290635
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||||||| ||| |  |||| ||||||| |||||| |||| | || ||||| || || || ||||||||||||||||||| |||||||||| |||||     
T  34290738 ggttcctcatatatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgttt 34290639  T
Q  492 tttt 495  Q
    ||||    
T  34290638 tttt 34290635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 452 - 495
Target Start/End: Original strand, 42453468 - 42453511
Alignment:
Q  452 ttgtatttatcttttaaaaaatttaaatagaacgttgttctttt 495  Q
    |||||||||||||||||||||||||||| |||| ||||||||||    
T  42453468 ttgtatttatcttttaaaaaatttaaattgaacattgttctttt 42453511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 43207339 - 43207237
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||||||||||| |  |||| ||||||| ||||| ||||| | || ||||| || || || ||||||||||||||||||| |||||||||| ||| ||    
T  43207339 ggttcctcatgtatacggtagtcattttcacctttg-atgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctc 43207241  T
Q  492 tttt 495  Q
    ||||    
T  43207240 tttt 43207237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 309 - 365
Target Start/End: Complemental strand, 36179683 - 36179629
Alignment:
Q  309 gttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||| |||||||||  ||||||| |||||||||||||||||| |||||    
T  36179683 gttgtcttgttttcggcctatta--gaattggatcctcttgcttttggtgtcaggtg 36179629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 392 - 484
Target Start/End: Complemental strand, 8073440 - 8073348
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 484  Q
    |||||||||||||| |  |||| |||||||  ||||| |||| | || ||||| |  || |||||||||||||||||||||| ||||||||||    
T  8073440 ggttcctcatgtatacggtagtcattttcacttttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaac 8073348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 365
Target Start/End: Complemental strand, 43207387 - 43207342
Alignment:
Q  318 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  43207387 ttttaggcctatta--gaattaggtcctcttgcttttggtgttaggtg 43207342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 392 - 484
Target Start/End: Original strand, 44708481 - 44708573
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 484  Q
    |||||||||||||| |  |||| ||||||| |||||| |||| |  | ||||| || || || ||||||||||||||||||| ||||||||||    
T  44708481 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccggatatatacggcaccttatatttatcttttaaaaaatataaatagaac 44708573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 392 - 484
Target Start/End: Complemental strand, 53149416 - 53149324
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 484  Q
    |||||||||||||| |  |||| ||||| |||| ||  |||| | || ||||| || || |||||||||||||||||||||| ||||||||||    
T  53149416 ggttcctcatgtatacggtagtcatttttatctctgagtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 53149324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 365
Target Start/End: Complemental strand, 53507034 - 53506989
Alignment:
Q  318 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  53507034 ttttaggcctatta--gaattaggtcctcttgcttttggtgttaggtg 53506989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 365
Target Start/End: Complemental strand, 54407307 - 54407262
Alignment:
Q  318 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  54407307 ttttaggcctatta--gaattaggtcctcttgcttttggtgttaggtg 54407262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 483
Target Start/End: Complemental strand, 9878789 - 9878698
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaa 483  Q
    ||||||| |||||| | ||||| ||||||| |||||| |||| | || |||||  | || || ||||||||||||||||||| |||||||||    
T  9878789 ggttccttatgtatacgatagtcattttcacctttgggtgtaccgcatatatactgcaccttatatttatcttttaaaaaatataaatagaa 9878698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 452 - 495
Target Start/End: Original strand, 18372547 - 18372590
Alignment:
Q  452 ttgtatttatcttttaaaaaatttaaatagaacgttgttctttt 495  Q
    |||||||||||||||||||||| |||||||||| ||| ||||||    
T  18372547 ttgtatttatcttttaaaaaatataaatagaacattgctctttt 18372590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 452 - 495
Target Start/End: Complemental strand, 36716067 - 36716024
Alignment:
Q  452 ttgtatttatcttttaaaaaatttaaatagaacgttgttctttt 495  Q
    |||||||||||||||||||||| |||||||||| ||| ||||||    
T  36716067 ttgtatttatcttttaaaaaatataaatagaacattgctctttt 36716024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 392 - 482
Target Start/End: Complemental strand, 50939335 - 50939245
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaataga 482  Q
    |||||||||||||| |  |||| ||||| | |||||| |||| || | ||||| || || || ||||||||||||||||||| ||||||||    
T  50939335 ggttcctcatgtatacggtagtcatttttacctttgggtgtaccatatatatacggcaccttatatttatcttttaaaaaatataaataga 50939245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 377 - 427
Target Start/End: Original strand, 52973385 - 52973435
Alignment:
Q  377 gggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttg 427  Q
    ||||||||||||||| |||| ||||| || || ||||||||||||||||||    
T  52973385 gggagggtggtttgaagttcatcatgcatacagtagtgattttcatctttg 52973435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 166
Target Start/End: Complemental strand, 23641525 - 23641460
Alignment:
Q  101 gccggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaa 166  Q
    ||||||| ||||||| |||||   | |||||||||| ||||||| ||||||||||||||| |||||    
T  23641525 gccggactttggggtgtgcaaaccgctcaatggaaccgggcctccccaaggtatgggcctcaaaaa 23641460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 452 - 484
Target Start/End: Complemental strand, 27078611 - 27078579
Alignment:
Q  452 ttgtatttatcttttaaaaaatttaaatagaac 484  Q
    |||||||||||||||||||||| ||||||||||    
T  27078611 ttgtatttatcttttaaaaaatataaatagaac 27078579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 452 - 484
Target Start/End: Complemental strand, 27084408 - 27084376
Alignment:
Q  452 ttgtatttatcttttaaaaaatttaaatagaac 484  Q
    |||||||||||||||||||||| ||||||||||    
T  27084408 ttgtatttatcttttaaaaaatataaatagaac 27084376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 365
Target Start/End: Complemental strand, 34290786 - 34290741
Alignment:
Q  318 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||||  ||||| |||||||||| |||||||||||||||    
T  34290786 ttttaggcctatta--gaattaggtcctcttgtttttggtgttaggtg 34290741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 365
Target Start/End: Original strand, 37168323 - 37168368
Alignment:
Q  318 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||||||  ||| ||||||||||||||| ||||||||||    
T  37168323 ttttaggcctattata--attaggtcctcttgcttttagtgttaggtg 37168368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 452 - 484
Target Start/End: Original strand, 42098865 - 42098897
Alignment:
Q  452 ttgtatttatcttttaaaaaatttaaatagaac 484  Q
    |||||||||||||||||||||| ||||||||||    
T  42098865 ttgtatttatcttttaaaaaatataaatagaac 42098897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 365
Target Start/End: Original strand, 44708433 - 44708478
Alignment:
Q  318 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||||  ||||| |||| |||||||||||||||||||||    
T  44708433 ttttaggcctatta--gaattaggtcatcttgcttttggtgttaggtg 44708478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1320 (Bit Score: 110; Significance: 3e-55; HSPs: 1)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 183 - 534
Target Start/End: Original strand, 1144 - 1497
Alignment:
Q  183 tactactaagtactaccctactaaaaacaaaatttctt------tttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnn 276  Q
    |||||||||||||||||| |||||| | |||||| |||      |||||||||||||||| |||||||||||||||||||| ||| |||||||           
T  1144 tactactaagtactaccccactaaataaaaaattccttattatttttctctctgataccacgcgttccatcaccatcactctatcagactttcattttct 1243  T
Q  277 ncttctccgatttgatttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnn 376  Q
     ||||||||||||||||||||||||||| || ||||||||||||||||||| |  ||||||||||||||||| |||||||||||||  ||| |           
T  1244 tcttctccgatttgatttccttttcctcttctgttgtcttgttttaggcctgt--tagaattgggtcctcttacttttggtgttag--gtgaattttttt 1339  T
Q  377 gggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaattta 476  Q
    || || ||||||||||||||||||||||| | |||||||||||||  ||||| |||||  || |||||  | || || ||||||||||||||||| ||||    
T  1340 ggaagcgtggtttgaggttcctcatgtatacgatagtgattttcacatttgggtgtatagcatatatacagcaccttatatttatcttttaaaaatttta 1439  T
Q  477 aatagaacgttgttctttttnnnnnnntacgttgttattttattacgggcctcttttc 534  Q
    |||||||| || |||||||        |||||| |||||||||||||| | |||||||    
T  1440 aatagaacattattcttttaaaaaaaatacgtttttattttattacggacttcttttc 1497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 95; Significance: 3e-46; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 186 - 495
Target Start/End: Complemental strand, 231167 - 230858
Alignment:
Q  186 tactaagtactaccctactaaaaacaa-aat-ttctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctc 283  Q
    ||||||||||||||| | |||||| || ||| |||| |||||||||||||||||| ||||||||| |||||||||||| ||||||||       |||| |    
T  231167 tactaagtactaccccattaaaaaaaataatattctctttctctctgataccatgtgttccatcaacatcactccatcagactttccttttcttcttccc 231068  T
Q  284 cgatttgatttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggaggg 383  Q
     |||||||||||| ||||||| |  ||| | |||||||||||||||  |||||| ||||||||||||||||||||||||||| ||        |||||||    
T  231067 tgatttgatttccctttcctcttttgttatattgttttaggcctat--tagaatcgggtcctcttgcttttggtgttaggtgggtggttttttgggaggg 230970  T
Q  384 tggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaa 483  Q
    |||||||| |||||||||||||    |||||||||||| |||||| | |||| || |||||    || ||  ||||||||||||| ||||||||||||||    
T  230969 tggtttgaagttcctcatgtataaggtagtgattttcacctttgggtatatcgcatatatacaacaccttaaatttatcttttaacaaatttaaatagaa 230870  T
Q  484 cgttgttctttt 495  Q
    | ||||||||||    
T  230869 cattgttctttt 230858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 232611 - 232544
Alignment:
Q  99 aggccggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaa 166  Q
    |||||||||| |||  | |||||||||||||||||||| ||||||| | |||||||| | ||||||||    
T  232611 aggccggaccctggcatgtgcaaggagttcaatggaaccgggcctccctaaggtatgagtctaaaaaa 232544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 231 - 489
Target Start/End: Complemental strand, 173771 - 173515
Alignment:
Q  231 ataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcagttgtcttgttttaggcctatt 330  Q
    |||||| ||| | ||||||||||| |||||| ||||||||       |||| | |||||||||||||||||||| || ||||||| ||||||||||||||    
T  173771 ataccacgcgcttcatcaccatcattccatcagactttccttttcttcttccctgatttgatttccttttcctcttctgttgtctagttttaggcctatt 173672  T
Q  331 atagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggat 430  Q
    |  |||||| | ||||||||||||||||||| ||  ||        |||||| ||||||||||||||||| |||| |  |||||||||| | |||||| |    
T  173671 a--gaattgagacctcttgcttttggtgttaagtaggtgtttttatgggaggatggtttgaggttcctcacgtatacggtagtgatttttacctttgggt 173574  T
Q  431 gtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgt 489  Q
    ||||| || ||||| ||||| ||||||||||||||||||||||||||||||||| ||||    
T  173573 gtatcgcatatatacggtaccttgtatttatcttttaaaaaatttaaatagaacattgt 173515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 309 - 496
Target Start/End: Original strand, 40003 - 40192
Alignment:
Q  309 gttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg--tgtannnnnnngggagggtggtttgaggttcctcatgtatt 406  Q
    |||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||  |||        |||| |||||||||||||| |||||||||     
T  40003 gttgtcttgttttaggcctatta--gaattgggtcctcttgctttttgtgttaggtggatgtttttttttgggacggtggtttgaggttgctcatgtata 40100  T
Q  407 caatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatctttt--aaaaaatttaaatagaacgttgttcttttt 496  Q
    | || |||||||||| ||| || ||||  ||| | ||| || || |||||||||||||||  |||||| ||||||||||| |||||||||||    
T  40101 cgattgtgattttcaccttagggtgtacaacataaatacggcaccttgtatttatcttttaaaaaaaaattaaatagaacattgttcttttt 40192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 309 - 496
Target Start/End: Original strand, 138063 - 138252
Alignment:
Q  309 gttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg--tgtannnnnnngggagggtggtttgaggttcctcatgtatt 406  Q
    |||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||  |||        |||| |||||||||||||| |||||||||     
T  138063 gttgtcttgttttaggcctatta--gaattgggtcctcttgctttttgtgttaggtggatgtttttttttgggacggtggtttgaggttgctcatgtata 138160  T
Q  407 caatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatctttt--aaaaaatttaaatagaacgttgttcttttt 496  Q
    | || |||||||||| ||| || ||||  ||| | ||| || || |||||||||||||||  |||||| ||||||||||| |||||||||||    
T  138161 cgattgtgattttcaccttagggtgtacaacataaatacggcaccttgtatttatcttttaaaaaaaaattaaatagaacattgttcttttt 138252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1590 (Bit Score: 59; Significance: 9e-25; HSPs: 2)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 377 - 495
Target Start/End: Complemental strand, 375 - 257
Alignment:
Q  377 gggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaattta 476  Q
    |||||||||||||||||||| |||||||| |  ||||||||||||  ||||| |||| | || ||||| |  || |||||||||||||||||||||||||    
T  375 gggagggtggtttgaggttcatcatgtatacggtagtgattttcacatttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaattta 276  T
Q  477 aatagaacgttgttctttt 495  Q
    |||||||| ||||||||||    
T  275 aatagaacattgttctttt 257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1590; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 501 - 432
Alignment:
Q  97 caaggccggacctt-ggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaa 166  Q
    |||||||||||||| ||||| ||||||||||||||| ||||| |||||  ||||||||||| ||| |||||    
T  501 caaggccggacctttggggtgtgcaaggagttcaatagaact-ggccttgccaaggtatggacctcaaaaa 432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 54; Significance: 9e-22; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 101 - 209
Target Start/End: Original strand, 38798 - 38907
Alignment:
Q  101 gccggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcct-aaaaaataatataggccggtaatactactaagtactacc 199  Q
    ||||||| ||||||| |||||||||||||||||||||||| ||  ||||||||||||||| |||||| | ||||| || ||| |||||||||||  ||||    
T  38798 gccggactttggggtgtgcaaggagttcaatggaactgggtcttcccaaggtatgggcctcaaaaaaaattatagtccagtagtactactaagtgttacc 38897  T
Q  200 ctactaaaaa 209  Q
    ||||||||||    
T  38898 ctactaaaaa 38907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 380 - 490
Target Start/End: Original strand, 38914 - 39024
Alignment:
Q  380 agggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaat 479  Q
    |||||||||||||||||||||| ||| |  ||||||||||||  ||||  |||||| || ||||| |  || ||||||||||||||||||||||||||||    
T  38914 agggtggtttgaggttcctcatatatacggtagtgattttcacatttgtgtgtatcgcatatatacgacaccttgtatttatcttttaaaaaatttaaat 39013  T
Q  480 agaacgttgtt 490  Q
    ||||| |||||    
T  39014 agaacattgtt 39024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 494
Target Start/End: Complemental strand, 206597 - 206489
Alignment:
Q  386 gtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacg 485  Q
    |||||||||||||||||||| |  |||||||||||| | |||| |||| | || ||||| |  || |||||||||||||||| ||||||||||||||||     
T  206597 gtttgaggttcctcatgtatacggtagtgattttcaccattgggtgtaccgcatatatacgacaccttgtatttatcttttacaaaatttaaatagaaca 206498  T
Q  486 ttgttcttt 494  Q
    || ||||||    
T  206497 ttcttcttt 206489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 377 - 494
Target Start/End: Complemental strand, 24110 - 23993
Alignment:
Q  377 gggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaattta 476  Q
    |||||||||||||||| ||||| ||| || |  || |||||||||  ||||| |||| | || ||||| |  || |||||||||||||||||||||||||    
T  24110 gggagggtggtttgagattccttatgcatacggtaatgattttcacttttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaattta 24011  T
Q  477 aatagaacgttgttcttt 494  Q
    |||||||  |||||||||    
T  24010 aatagaatattgttcttt 23993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 106539 - 106642
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 491  Q
    |||||||||||||| |  |||| ||||||| |||||| |||| | || ||||| |  || || ||||||||||||||||||| |||||||||| ||||||    
T  106539 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagaacattgttc 106638  T
Q  492 tttt 495  Q
    ||||    
T  106639 tttt 106642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 365
Target Start/End: Original strand, 106491 - 106536
Alignment:
Q  318 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||||  || || ||||||||||||||||||||||||||    
T  106491 ttttaggcctatta--gatttaggtcctcttgcttttggtgttaggtg 106536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 38; Significance: 0.000000000003; HSPs: 3)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 380 - 433
Target Start/End: Original strand, 16016 - 16069
Alignment:
Q  380 agggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgta 433  Q
    |||||||||||||||| ||||||||| |  ||||||||||||||||||||||||    
T  16016 agggtggtttgaggtttctcatgtatacggtagtgattttcatctttggatgta 16069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 452 - 484
Target Start/End: Original strand, 16126 - 16158
Alignment:
Q  452 ttgtatttatcttttaaaaaatttaaatagaac 484  Q
    |||||||||||||||||||||||||||||||||    
T  16126 ttgtatttatcttttaaaaaatttaaatagaac 16158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 365
Target Start/End: Original strand, 15948 - 16003
Alignment:
Q  309 gttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 365  Q
    ||||||||||||||||||||||||| | |||| || ||||||||||| || ||||||    
T  15948 gttgtcttgttttaggcctattata-atttggatcatcttgcttttgatgctaggtg 16003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 392 - 484
Target Start/End: Original strand, 1344 - 1436
Alignment:
Q  392 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 484  Q
    |||||||||||||| |  |||| |||||||||| ||| |||| | || ||||| || |  |||||||||||||||||||||| ||||||||||    
T  1344 ggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcagcttgtatttatcttttaaaaaatataaatagaac 1436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 433
Target Start/End: Complemental strand, 350319 - 350269
Alignment:
Q  383 gtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgta 433  Q
    |||||||||||| ||||||||||||| ||| |||||||| |||||||||||    
T  350319 gtggtttgaggtacctcatgtattcagtagcgattttcacctttggatgta 350269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 383 - 468
Target Start/End: Complemental strand, 351445 - 351360
Alignment:
Q  383 gtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaa 468  Q
    |||||||||||| |||| |||||||| ||| |||||||| |||||| ||||  ||| ||||| |  || |||||||||||||||||    
T  351445 gtggtttgaggtacctcgtgtattcagtagcgattttcacctttgggtgtacaacatatatacgacaccttgtatttatcttttaa 351360  T

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Target: scaffold0001 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 484
Target Start/End: Original strand, 183102 - 183153
Alignment:
Q  433 atcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 484  Q
    |||||| ||||| | ||| |||||||||||||||||||||| ||||||||||    
T  183102 atcacatatatacgatactttgtatttatcttttaaaaaatataaatagaac 183153  T

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