View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15502_low_10 (Length: 242)
Name: NF15502_low_10
Description: NF15502
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15502_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 37 - 225
Target Start/End: Original strand, 13556164 - 13556349
Alignment:
| Q |
37 |
caaaattttaggagcacactaataaagtccgtatatatcataatttttagaacctttcgattaaaagatttttaggaccattagattaaaagaattatta |
136 |
Q |
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| T |
13556164 |
caaaattttaggagcacactaataaagtccgtatatatcatattttttagaaccattcgattaaaagatttttaggaccattagatttaaagaattatta |
13556263 |
T |
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| Q |
137 |
aaaatagcattatcaannnnnnnnnnnnnngaggggaatcaattatttctgtttttgttctaatttcacataac-atccatgagatacgt |
225 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
13556264 |
aaaatagcattatcaatttttgttttt----aggggaatcaattatttctgtttttgttctaatttcacataacgatccatgagatacgt |
13556349 |
T |
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