View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15503_high_15 (Length: 282)
Name: NF15503_high_15
Description: NF15503
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15503_high_15 |
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Alignment Details
Target: chr2 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 17 - 263
Target Start/End: Original strand, 2751906 - 2752156
Alignment:
| Q |
17 |
aaattgaaatggctagctaggaaaaagtaatatggcatgctggtaattaagcttctttagcatgcaaaattttatgattgtgaaggtgacatgcccaaat |
116 |
Q |
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| T |
2751906 |
aaattgaaatggctagctaggaaaaagtaatatggcatgctggtaattaagcttctttagcatgcaaaattttatgattgtgaaggtgacatgcctaaat |
2752005 |
T |
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| Q |
117 |
aaagaga----ggcttagtacatatttacatttaattacgtaaattactgtcaaattttggaacgttgtttgtattgnnnnnnnnnnnnnattcattacg |
212 |
Q |
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| T |
2752006 |
aaagagaggctggcttagtacatatttacatttaattacgtaaattactgtcaaattttggaacattgtttgtattgttttttcttttttattcattacg |
2752105 |
T |
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| Q |
213 |
ataggttttaagcatttcgagattatggcatgatatcttcttgtttaggaa |
263 |
Q |
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| T |
2752106 |
ataggttttaagcatttcgagattatggcatgatatcttcttgtttaggaa |
2752156 |
T |
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