View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15503_high_16 (Length: 269)
Name: NF15503_high_16
Description: NF15503
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15503_high_16 |
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Alignment Details
Target: chr4 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 45400568 - 45400829
Alignment:
| Q |
1 |
gattaatcaactatagtataatttcacctctnnnnnnnnctagtgttatttcagaacacacatacacaaactactatctcccctctgacatcaagaacgg |
100 |
Q |
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| T |
45400568 |
gattaatcaactatagtataatttcacctctaaaaaaaactagtgttatttcagaacacacatacacaaactactatctcccctctgacatcaagaacgg |
45400667 |
T |
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| Q |
101 |
tccaatgttaaattaaaaagtgatttgaatcggaaatcccaagatccaataaaagctgaactaatcatttgttgtttgtttcacgacacctaccatgtaa |
200 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45400668 |
tccaatgttaaattaaaaagtgaattgaatcggaaatcccaagatccaataaaagctgaactaatcatttgttgtttgtttcacgacacctaccatgtaa |
45400767 |
T |
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| Q |
201 |
gttgattgccacatgttcattttttagtgcatggatcacattgttatcaagacttcatctca |
262 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45400768 |
tttgattgccacatgttcattttttagtgcatggatcacattgttatcaagacttcatctca |
45400829 |
T |
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