View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15503_low_6 (Length: 468)
Name: NF15503_low_6
Description: NF15503
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15503_low_6 |
 | |
|
| [»] scaffold0032 (1 HSPs) |
| | |
|
| [»] scaffold0229 (1 HSPs) |
| | |
|
| [»] scaffold0519 (1 HSPs) |
| | |
|
| [»] scaffold0263 (1 HSPs) |
| | |
|
| [»] scaffold0041 (1 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 203; Significance: 1e-110; HSPs: 15)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 157 - 444
Target Start/End: Original strand, 5466633 - 5466911
Alignment:
| Q |
157 |
tagaggaaaatgcaactttgagaggaattctaatttccctacgatatattttccactcatttaaagaattttaagtcatgtcttttgttaaccatcatta |
256 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5466633 |
tagaggaaaatgccactttgagaggaattctaatttccctacaatatatattccactcatttaaagaattttaagtcatgtcttttgttaaccatcatta |
5466732 |
T |
|
| Q |
257 |
tcttgaatct-tttgaagatattgttgatttcccactttgtagccatgttgatattcacttgactacttgaggcccattatctttccaattctatcattt |
355 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| |
|
|
| T |
5466733 |
tcttgaatctctttgaagatattgttgatttcccactttgtagccatgttgatattc--------acttgaggcccattatctttccaattctgtcattt |
5466824 |
T |
|
| Q |
356 |
ta-tattttgcacaatttaaacaaattattactataacataactacactgaacattattctaattctactagattaaaccaaccaaagag |
444 |
Q |
| |
|
|| | |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
5466825 |
tatttttttccacaatttaaacaaattat---tataacataactacactgaacattattctaattctactagattaaaccaaccatagag |
5466911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 26 - 145
Target Start/End: Original strand, 35869625 - 35869744
Alignment:
| Q |
26 |
gtggcatatcctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatataccattggtacc |
125 |
Q |
| |
|
|||||| | ||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||| || ||||||||||||||||||||||||||| |
|
|
| T |
35869625 |
gtggcacaccctttaaaaaagtatatcaaataaaacatttatatagtaacattggtaggtggcacattataattggtcaatggtatataccattggtacc |
35869724 |
T |
|
| Q |
126 |
ttaacagtacacaagtggaa |
145 |
Q |
| |
|
|||| |||||||||||||| |
|
|
| T |
35869725 |
ttaatggtacacaagtggaa |
35869744 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 18 - 146
Target Start/End: Complemental strand, 22343462 - 22343334
Alignment:
| Q |
18 |
tgtgccatgtggcatatcctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatatacca |
117 |
Q |
| |
|
|||| ||||||||| ||||||||||| | ||||||||||||| ||||||||| ||||||||||||| || |||| |||| ||||||||| ||||||||| |
|
|
| T |
22343462 |
tgtgtcatgtggcacatcctttaaaataatatatcaaataaagcatttataaagtaacattgatagatgacacactctaattggtcaatgatatatacca |
22343363 |
T |
|
| Q |
118 |
ttggtaccttaacagtacacaagtggaat |
146 |
Q |
| |
|
||| |||||||| ||||||||||||||| |
|
|
| T |
22343362 |
ttgataccttaatggtacacaagtggaat |
22343334 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 21260919 - 21260788
Alignment:
| Q |
18 |
tgtgccatgtggcatatcctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatatacca |
117 |
Q |
| |
|
|||||||||||||| | ||||||||||| ||||||||||||||||||||||| ||||||||| |||||| |||| |||| ||| ||||| |||||| || |
|
|
| T |
21260919 |
tgtgccatgtggcacaccctttaaaaaaatatatcaaataaaacatttataaagtaacattggtaggtgacacactctaattggccaatgatatatatca |
21260820 |
T |
|
| Q |
118 |
ttggtaccttaacagtacacaagtggaatccg |
149 |
Q |
| |
|
|||||||||||| ||| | |||||||||||| |
|
|
| T |
21260819 |
ttggtaccttaatggtatataagtggaatccg |
21260788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 18 - 158
Target Start/End: Complemental strand, 12473829 - 12473689
Alignment:
| Q |
18 |
tgtgccatgtggcatatcctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatatacca |
117 |
Q |
| |
|
|||| |||||| || | ||||||||||| ||||||||||||| ||| ||||| ||||||||| ||||||||||| |||| ||| ||||||||||||||| |
|
|
| T |
12473829 |
tgtgtcatgtgccacaccctttaaaaaaatatatcaaataaagcatctataaagtaacattggtaggtggcacactctaattggccaatggtatatacca |
12473730 |
T |
|
| Q |
118 |
ttggtaccttaacagtacacaagtggaatccggtttagata |
158 |
Q |
| |
|
|||||||||||| ||| |||||||| ||||| || ||||| |
|
|
| T |
12473729 |
ttggtaccttaatggtatacaagtggtatccgcttaagata |
12473689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 18 - 158
Target Start/End: Complemental strand, 12528238 - 12528098
Alignment:
| Q |
18 |
tgtgccatgtggcatatcctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatatacca |
117 |
Q |
| |
|
|||| |||||| || | ||||||||||| ||||||||||||| ||| ||||| ||||||||| ||||||||||| |||| ||| ||||||||||||||| |
|
|
| T |
12528238 |
tgtgtcatgtgccacaccctttaaaaaaatatatcaaataaagcatctataaagtaacattggtaggtggcacactctaattggccaatggtatatacca |
12528139 |
T |
|
| Q |
118 |
ttggtaccttaacagtacacaagtggaatccggtttagata |
158 |
Q |
| |
|
|||||||||||| ||| |||||||| ||||| || ||||| |
|
|
| T |
12528138 |
ttggtaccttaatggtatacaagtggtatccgcttaagata |
12528098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 17 - 148
Target Start/End: Original strand, 33249419 - 33249550
Alignment:
| Q |
17 |
ttgtgccatgtggcatatcctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatatacc |
116 |
Q |
| |
|
||||||||||||||| | |||||||||| ||||||||||||| ||||||||| ||||||||| |||||| |||| |||| ||| |||| ||||||||| |
|
|
| T |
33249419 |
ttgtgccatgtggcacaccctttaaaaatatatatcaaataaagcatttataaagtaacattggtaggtgacacactctaattggccaattgtatatacc |
33249518 |
T |
|
| Q |
117 |
attggtaccttaacagtacacaagtggaatcc |
148 |
Q |
| |
|
||| ||||||||| ||||||||||| ||||| |
|
|
| T |
33249519 |
atttgtaccttaatggtacacaagtgaaatcc |
33249550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 52012904 - 52012778
Alignment:
| Q |
18 |
tgtgccatgtggcatatcctttaaaaaat-tatatcaaataaaacatttataaggtaacattgataggtggcaca-ttctatgtggtcaatggtatatac |
115 |
Q |
| |
|
|||| ||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||| || |||||||| || ||| ||||||||| |||||| |
|
|
| T |
52012904 |
tgtgacatgtggcacacactttaaaaaacatatatcaaataaaacatttataaagtaacattggtatgtggcacacttttat-tggtcaatgttatataa |
52012806 |
T |
|
| Q |
116 |
cattggtaccttaacagtacacaagtgg |
143 |
Q |
| |
|
|||||||||||||| |||||||||||| |
|
|
| T |
52012805 |
cattggtaccttaatggtacacaagtgg |
52012778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 47 - 143
Target Start/End: Original strand, 9799438 - 9799534
Alignment:
| Q |
47 |
tatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatataccattggtaccttaacagtacacaagtgg |
143 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||| || |||||||||||| ||||||||| |||||| |||||||||||||| ||| |||||||| |
|
|
| T |
9799438 |
tatattaaataaaacatttataaagtaacattggtatgtggcacattcttgttggtcaatgttatataacattggtaccttaatggtatacaagtgg |
9799534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 149
Target Start/End: Complemental strand, 51812022 - 51811908
Alignment:
| Q |
35 |
cctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatataccattggtaccttaacagta |
134 |
Q |
| |
|
||||||||||| ||||||||| |||| |||||||| ||||||||| ||||||||| | |||| ||| |||| |||||| | ||| |||||||| ||| |
|
|
| T |
51812022 |
cctttaaaaaaatatatcaaaaaaaaaatttataaagtaacattggtaggtggcatactctaattggccaataatatatatctttgataccttaatggta |
51811923 |
T |
|
| Q |
135 |
cacaagtggaatccg |
149 |
Q |
| |
|
||| ||||||||||| |
|
|
| T |
51811922 |
cacgagtggaatccg |
51811908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 66 - 149
Target Start/End: Complemental strand, 55590559 - 55590476
Alignment:
| Q |
66 |
ataaggtaacattgataggtggcacattctatgtggtcaatggtatataccattggtaccttaacagtacacaagtggaatccg |
149 |
Q |
| |
|
|||| ||||||||| |||||| |||| | || || |||||| ||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
55590559 |
ataaagtaacattggtaggtgacacactataattgatcaatgatatataccattggtaccttaatggtacacaagtggaatccg |
55590476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 49 - 142
Target Start/End: Original strand, 52910126 - 52910219
Alignment:
| Q |
49 |
tatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatataccattggtaccttaacagtacacaagtg |
142 |
Q |
| |
|
||||||||||| ||||||||| |||| |||| ||||||||||| | || ||| |||||||||||| |||||||||| | | ||||||||||| |
|
|
| T |
52910126 |
tatcaaataaagcatttataaagtaatattggtaggtggcacactttaattggccaatggtatataacattggtaccattatggtacacaagtg |
52910219 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 53 - 112
Target Start/End: Complemental strand, 1796222 - 1796163
Alignment:
| Q |
53 |
aaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtata |
112 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||| | || ||| |||||||||| |
|
|
| T |
1796222 |
aaataaaacatttataaagtaacattgataggtggcacaatataattggccaatggtata |
1796163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 148
Target Start/End: Original strand, 34829172 - 34829259
Alignment:
| Q |
61 |
catttataaggtaacattgataggtggcacattctatgtggtcaatggtatataccattggtaccttaacagtacacaagtggaatcc |
148 |
Q |
| |
|
||||||||| ||||||||| |||||| |||| | || ||| || || |||||| |||||||||||||| |||||| ||||| ||||| |
|
|
| T |
34829172 |
catttataaagtaacattggtaggtgacacactttaattggccattgatatatatcattggtaccttaatagtacataagtgaaatcc |
34829259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 33174636 - 33174581
Alignment:
| Q |
20 |
tgccatgtggcatatcctttaaaaaattatatcaaataaaacatttataaggtaacat |
77 |
Q |
| |
|
||||| |||||| | |||||||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
33174636 |
tgccacgtggcacaccctttaaaaa--tatatcaaataaaacatttataaagtaacat |
33174581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 80; Significance: 2e-37; HSPs: 9)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 17 - 148
Target Start/End: Complemental strand, 32676262 - 32676131
Alignment:
| Q |
17 |
ttgtgccatgtggcatatcctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatatacc |
116 |
Q |
| |
|
||||||||||||||| || |||||||||| ||||||||||||| ||||||||| ||||||||| ||||||| ||||||| ||| |||||||||||||| |
|
|
| T |
32676262 |
ttgtgccatgtggcacatgctttaaaaaaatatatcaaataaagcatttataaagtaacattggtaggtggtgcattctaattggccaatggtatatacc |
32676163 |
T |
|
| Q |
117 |
attggtaccttaacagtacacaagtggaatcc |
148 |
Q |
| |
|
||||||||||||| ||||||||||||||||| |
|
|
| T |
32676162 |
attggtaccttaatggtacacaagtggaatcc |
32676131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 29119370 - 29119501
Alignment:
| Q |
18 |
tgtgccatgtggcatatcctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatatacca |
117 |
Q |
| |
|
|||||||||||||| | ||||||||||| ||||||||||||| ||| ||||| |||||| |||||||||||||| |||| ||| ||||||||||||||| |
|
|
| T |
29119370 |
tgtgccatgtggcacaccctttaaaaaaatatatcaaataaagcatctataaagtaacaatgataggtggcacactctaattggccaatggtatatacca |
29119469 |
T |
|
| Q |
118 |
ttggtaccttaacagtacacaagtggaatccg |
149 |
Q |
| |
|
|||||||||||| |||||||||||| ||||| |
|
|
| T |
29119470 |
ttggtaccttaatggtacacaagtggtatccg |
29119501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 143
Target Start/End: Original strand, 8809685 - 8809811
Alignment:
| Q |
18 |
tgtgccatgtggcatatcctttaaaaaat-tatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatatacc |
116 |
Q |
| |
|
|||| ||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||| || |||||||| ||| ||||||||| |||||| | |
|
|
| T |
8809685 |
tgtgacatgtggcacacactttaaaaaacatatatcaaataaaacatttataaagtaacattggtacgtggcacactcttattggtcaatgttatataac |
8809784 |
T |
|
| Q |
117 |
attggtaccttaacagtacacaagtgg |
143 |
Q |
| |
|
||||||||||||| |||||||||||| |
|
|
| T |
8809785 |
attggtaccttaatggtacacaagtgg |
8809811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 50 - 148
Target Start/End: Complemental strand, 25161402 - 25161304
Alignment:
| Q |
50 |
atcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatataccattggtaccttaacagtacacaagtggaatcc |
148 |
Q |
| |
|
|||||||||||||||||||| ||||||||| ||||||||||| | || |||||||||||||||||||||| || |||| ||||||||||||||||| |
|
|
| T |
25161402 |
atcaaataaaacatttataaagtaacattgttaggtggcacactgtaattggtcaatggtatataccattgagactttaatggtacacaagtggaatcc |
25161304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 35 - 148
Target Start/End: Complemental strand, 8462236 - 8462124
Alignment:
| Q |
35 |
cctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatataccattggtaccttaacagta |
134 |
Q |
| |
|
||||||||||| ||||| ||||||||||||||||| |||||||| ||||||||||| | || || |||||| |||||||||||||||| |||| | || |
|
|
| T |
8462236 |
cctttaaaaaagtatattaaataaaacatttataaaataacattggtaggtggcacactataattgatcaatgatatataccattggtactttaata-ta |
8462138 |
T |
|
| Q |
135 |
cacaagtggaatcc |
148 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
8462137 |
cacaagtggaatcc |
8462124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 2569161 - 2569037
Alignment:
| Q |
18 |
tgtgccatgtggcatatcctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatatacca |
117 |
Q |
| |
|
||||||| ||||| | |||||||||||| |||||||||||| |||| ||| ||||||||| ||||||||||| |||| ||| |||| ||||||||| |
|
|
| T |
2569161 |
tgtgccacatggcacaccctttaaaaaat-atatcaaataaagcattggtaatgtaacattggtaggtggcacactctaattggcaaatgatatatacca |
2569063 |
T |
|
| Q |
118 |
ttggtaccttaacagtacacaagtgg |
143 |
Q |
| |
|
|||||||||||| |||||||||||| |
|
|
| T |
2569062 |
ttggtaccttaatggtacacaagtgg |
2569037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 35998378 - 35998252
Alignment:
| Q |
18 |
tgtgccatgtggcatatcctttaaaaaat-tatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatatacc |
116 |
Q |
| |
|
|||||||||||||| | |||||||||| ||||| |||||||||| |||||| ||||||||||| |||||||| ||| | |||||| |||||| | |
|
|
| T |
35998378 |
tgtgccatgtggcacacactttaaaaaacatatataaaataaaacacttataaaataacattgatatgtggcacactcttattaatcaatgttatataac |
35998279 |
T |
|
| Q |
117 |
attggtaccttaacagtacacaagtgg |
143 |
Q |
| |
|
||||||||||||| ||| |||||||| |
|
|
| T |
35998278 |
attggtaccttaatggtatacaagtgg |
35998252 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 114
Target Start/End: Original strand, 3688917 - 3688980
Alignment:
| Q |
51 |
tcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatata |
114 |
Q |
| |
|
||||||||||||||||||| ||||||||| ||||| | ||| |||| ||||||||| |||||| |
|
|
| T |
3688917 |
tcaaataaaacatttataaagtaacattggtaggttgtacactctaattggtcaatgatatata |
3688980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 149
Target Start/End: Original strand, 46435584 - 46435630
Alignment:
| Q |
103 |
caatggtatataccattggtaccttaacagtacacaagtggaatccg |
149 |
Q |
| |
|
|||| |||||||||||||||||||||| |||||||||||| ||||| |
|
|
| T |
46435584 |
caattgtatataccattggtaccttaatggtacacaagtggtatccg |
46435630 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 77; Significance: 1e-35; HSPs: 10)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 17 - 149
Target Start/End: Original strand, 34392126 - 34392258
Alignment:
| Q |
17 |
ttgtgccatgtggcatatcctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatatacc |
116 |
Q |
| |
|
||||||||||||||| | ||||||||||| ||||||||||||| ||||||||| |||| |||| ||||||||||| |||| ||| |||||||||||||| |
|
|
| T |
34392126 |
ttgtgccatgtggcacaccctttaaaaaaatatatcaaataaagcatttataaagtaagattggtaggtggcacactctaattggccaatggtatatacc |
34392225 |
T |
|
| Q |
117 |
attggtaccttaacagtacacaagtggaatccg |
149 |
Q |
| |
|
|||||||||| || |||||||||||||||||| |
|
|
| T |
34392226 |
attggtacctcaatggtacacaagtggaatccg |
34392258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 33 - 148
Target Start/End: Complemental strand, 21604069 - 21603954
Alignment:
| Q |
33 |
atcctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatataccattggtaccttaacag |
132 |
Q |
| |
|
||||| ||||||| ||||||||||||||||||||||| ||||||||| |||||| ||| | || ||||||||||||||||||||||||||||||| | |
|
|
| T |
21604069 |
atcctataaaaaagtatatcaaataaaacatttataaagtaacattggtaggtgatacactataattggtcaatggtatataccattggtaccttaatgg |
21603970 |
T |
|
| Q |
133 |
tacacaagtggaatcc |
148 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
21603969 |
tacacaagtggaatcc |
21603954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 33 - 148
Target Start/End: Complemental strand, 7381801 - 7381687
Alignment:
| Q |
33 |
atcctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatataccattggtaccttaacag |
132 |
Q |
| |
|
|||||||||||||| |||||||||||| |||||||| ||||||||| ||| ||||||| |||| ||| |||| |||||||||||||||||||||| | |
|
|
| T |
7381801 |
atcctttaaaaaat-atatcaaataaagaatttataaagtaacattggtagatggcacactctaattggccaatagtatataccattggtaccttaatgg |
7381703 |
T |
|
| Q |
133 |
tacacaagtggaatcc |
148 |
Q |
| |
|
|||||||| ||||||| |
|
|
| T |
7381702 |
tacacaagcggaatcc |
7381687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 48 - 149
Target Start/End: Original strand, 37357997 - 37358098
Alignment:
| Q |
48 |
atatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatataccattggtaccttaacagtacacaagtggaatc |
147 |
Q |
| |
|
|||| ||||||| ||||||||| |||||||||||||||| |||| |||| | |||||||||||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
37357997 |
atattaaataaagcatttataaagtaacattgataggtgacacactctaattagtcaatggtatatatcattggtaccttaatgatacacaagtggaatc |
37358096 |
T |
|
| Q |
148 |
cg |
149 |
Q |
| |
|
|| |
|
|
| T |
37358097 |
cg |
37358098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 23863849 - 23863958
Alignment:
| Q |
18 |
tgtgccatgtggcatatcctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatatacca |
117 |
Q |
| |
|
|||||||||||||| | |||||||||| ||||||||||||| ||||||||| ||||||||| ||||||||||| |||| || |||| |||||||| |
|
|
| T |
23863849 |
tgtgccatgtggcacaccctttaaaaatatatatcaaataaagcatttataaagtaacattggtaggtggcacactctaattgaccaat--aatatacca |
23863946 |
T |
|
| Q |
118 |
ttggtaccttaa |
129 |
Q |
| |
|
|||||||||||| |
|
|
| T |
23863947 |
ttggtaccttaa |
23863958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 33 - 120
Target Start/End: Complemental strand, 4779695 - 4779608
Alignment:
| Q |
33 |
atcctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatataccattg |
120 |
Q |
| |
|
||||||||||||| ||||||||||||| |||||||| ||||||||| |||| |||||| | || ||| |||||||||||||| |||| |
|
|
| T |
4779695 |
atcctttaaaaaaatatatcaaataaagtatttataaagtaacattgttaggcggcacactataagtgatcaatggtatatactattg |
4779608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 41095827 - 41095901
Alignment:
| Q |
13 |
taggttgtgccatgtggcatatcctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtgg |
87 |
Q |
| |
|
|||| |||||||||||||||| | ||||||||| | ||||||||||| ||||||||| ||||||||| ||||||| |
|
|
| T |
41095827 |
tagggtgtgccatgtggcataccttttaaaaaaatctatcaaataaagcatttataaagtaacattggtaggtgg |
41095901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 143
Target Start/End: Complemental strand, 4775761 - 4775634
Alignment:
| Q |
17 |
ttgtgccatgtggcatatcctttaaaaaattatatcaaataaaac-atttataaggtaacattgataggtggcacattctatgtggtcaatggtatatac |
115 |
Q |
| |
|
||||||||||||||| ||||||||||||| ||||| ||||||||| ||| |||| |||| |||| ||| || |||||||| ||| |||| |||||| |
|
|
| T |
4775761 |
ttgtgccatgtggcacatcctttaaaaaaatatattaaataaaacaattaataaagtaagattggtagatgagacattctaattggccaataatatatat |
4775662 |
T |
|
| Q |
116 |
cattggtaccttaacagtacacaagtgg |
143 |
Q |
| |
|
|||||||| ||||| ||||| |||||| |
|
|
| T |
4775661 |
cattggtagcttaatggtacataagtgg |
4775634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 25275676 - 25275740
Alignment:
| Q |
26 |
gtggcatatcctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcaca |
91 |
Q |
| |
|
|||||| ||||||||||||| ||||||||||||| ||||| || ||||||||||||||||||||| |
|
|
| T |
25275676 |
gtggcacatcctttaaaaaagtatatcaaataaagtattta-aaagtaacattgataggtggcaca |
25275740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 128
Target Start/End: Original strand, 14565908 - 14566009
Alignment:
| Q |
27 |
tggcatatcctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatataccattggtacct |
126 |
Q |
| |
|
||||| ||||||||||||| |||||||||| || | |||||| ||| |||| || || ||||| |||| || |||||| |||||| ||||||||||| |
|
|
| T |
14565908 |
tggcacatcctttaaaaaactatatcaaatgaagtacttataaaataatattggtatgtagcacactctacttgatcaatgatatataacattggtacct |
14566007 |
T |
|
| Q |
127 |
ta |
128 |
Q |
| |
|
|| |
|
|
| T |
14566008 |
ta |
14566009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 75; Significance: 2e-34; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 26 - 148
Target Start/End: Complemental strand, 35341653 - 35341531
Alignment:
| Q |
26 |
gtggcatatcctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatataccattggtacc |
125 |
Q |
| |
|
|||||| | ||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||| | || |||||||||||||||| |||||||||| |
|
|
| T |
35341653 |
gtggcacaccctttaaaaaagtatatcaaataaaacatttataaagtaacattggtaggtggcacactataattggtcaatggtatatatcattggtacc |
35341554 |
T |
|
| Q |
126 |
ttaacagtacacaagtggaatcc |
148 |
Q |
| |
|
|||| ||||||||||||||||| |
|
|
| T |
35341553 |
ttaatggtacacaagtggaatcc |
35341531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 48072512 - 48072385
Alignment:
| Q |
18 |
tgtgccatgtggcatatcctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatatacca |
117 |
Q |
| |
|
||||||| |||||| | ||||||||||| || ||||||||||| |||||||| ||||||||| | |||||||| |||| || ||||||| ||||| | |
|
|
| T |
48072512 |
tgtgccacgtggcacaccctttaaaaaaatacatcaaataaaatatttataaaataacattgaaatgtggcacactctaattgatcaatgg--tatacta |
48072415 |
T |
|
| Q |
118 |
ttggtaccttaacagtacacaagtggaatc |
147 |
Q |
| |
|
|||||||||||| ||||||||||||||||| |
|
|
| T |
48072414 |
ttggtaccttaatagtacacaagtggaatc |
48072385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 23 - 148
Target Start/End: Complemental strand, 48250274 - 48250149
Alignment:
| Q |
23 |
catgtggcatatcctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatataccattggt |
122 |
Q |
| |
|
||||| ||||| ||||||||||| |||||||||||| ||| ||||| ||||||||| ||||||||||| |||| || ||||| |||||| ||||||| |
|
|
| T |
48250274 |
catgtagcataccctttaaaaaaaaatatcaaataaagcatctataaagtaacattggtaggtggcacactctaattgaccaatgatatatatcattggt |
48250175 |
T |
|
| Q |
123 |
accttaacagtacacaagtggaatcc |
148 |
Q |
| |
|
||||||| |||||||||||| |||| |
|
|
| T |
48250174 |
accttaatggtacacaagtggtatcc |
48250149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 23178554 - 23178462
Alignment:
| Q |
13 |
taggttgtgccatgtggcatatcctttaaaaaat-tatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtca |
104 |
Q |
| |
|
|||| |||| ||||||||||| | |||||||||| |||||| |||||||||||||||| ||||||||||| ||| |||||| || ||||||| |
|
|
| T |
23178554 |
taggatgtgtcatgtggcataccatttaaaaaatgtatatcgaataaaacatttataaaataacattgatatgtgacacattttaagtggtca |
23178462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 96
Target Start/End: Original strand, 32694624 - 32694694
Alignment:
| Q |
26 |
gtggcatatcctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattcta |
96 |
Q |
| |
|
|||||| | ||||||||||| ||||||||||||| |||||||| ||||||||||||| ||| ||| |||| |
|
|
| T |
32694624 |
gtggcacaccctttaaaaaaatatatcaaataaagaatttataaagtaacattgatagatgggacactcta |
32694694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 47 - 119
Target Start/End: Original strand, 40893116 - 40893189
Alignment:
| Q |
47 |
tatatcaaataaaa-catttataaggtaacattgataggtggcacattctatgtggtcaatggtatataccatt |
119 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||||||||| || |||||||| || ||||||||||||||||| |
|
|
| T |
40893116 |
tatatcaaataaaagcatttataaagtaacattgatagatgagacattctaattgaccaatggtatataccatt |
40893189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 72; Significance: 1e-32; HSPs: 16)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 26 - 149
Target Start/End: Original strand, 11607588 - 11607711
Alignment:
| Q |
26 |
gtggcatatcctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatataccattggtacc |
125 |
Q |
| |
|
|||||| | ||||||||||| ||||||||||||||||||||||| |||| |||| ||||||||||| | || ||||||||||||||||||||||||||| |
|
|
| T |
11607588 |
gtggcacaccctttaaaaaagtatatcaaataaaacatttataaagtaatattggtaggtggcacactataattggtcaatggtatataccattggtacc |
11607687 |
T |
|
| Q |
126 |
ttaacagtacacaagtggaatccg |
149 |
Q |
| |
|
|||| ||| |||||||||||||| |
|
|
| T |
11607688 |
ttaatggtatacaagtggaatccg |
11607711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 26 - 148
Target Start/End: Original strand, 39570097 - 39570219
Alignment:
| Q |
26 |
gtggcatatcctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatataccattggtacc |
125 |
Q |
| |
|
|||||| | ||||||||||| ||||||||||||||||||||||| ||||||||| |||||| |||| |||| ||| |||||||||||||||||| ||| |
|
|
| T |
39570097 |
gtggcacaccctttaaaaaagtatatcaaataaaacatttataaagtaacattggtaggtgacacactctaattggccaatggtatataccattgatact |
39570196 |
T |
|
| Q |
126 |
ttaacagtacacaagtggaatcc |
148 |
Q |
| |
|
|||| |||||||||||||||| |
|
|
| T |
39570197 |
ttaatgatacacaagtggaatcc |
39570219 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 19357323 - 19357435
Alignment:
| Q |
33 |
atcctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatataccattggtaccttaacag |
132 |
Q |
| |
|
|||||||||||||| |||||||||||| ||||||||| |||| |||| ||||||||||| |||| ||| ||||||||||||||||||||||| ||| | |
|
|
| T |
19357323 |
atcctttaaaaaat-atatcaaataaagcatttataaagtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccctaatgg |
19357421 |
T |
|
| Q |
133 |
tacacaagtggaat |
146 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
19357422 |
tacacaagtggaat |
19357435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 13015507 - 13015375
Alignment:
| Q |
18 |
tgtgccatgtggcatatcctttaaaaaat-tatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatatacc |
116 |
Q |
| |
|
|||| ||||||||| || ||||||||||| |||||||||||||| |||||||| ||||||||| || |||||||| ||| ||||||||| |||||| | |
|
|
| T |
13015507 |
tgtgacatgtggcacatactttaaaaaatatatatcaaataaaatatttataaagtaacattggtatgtggcacactcttattggtcaatgttatataac |
13015408 |
T |
|
| Q |
117 |
attggtaccttaacagtacacaagtggaatccg |
149 |
Q |
| |
|
||||||||||||| |||||||||||| ||||| |
|
|
| T |
13015407 |
attggtaccttaatggtacacaagtggtatccg |
13015375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 26 - 138
Target Start/End: Original strand, 33858592 - 33858704
Alignment:
| Q |
26 |
gtggcatatcctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatataccattggtacc |
125 |
Q |
| |
|
|||||| | ||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||| | || ||||||||| ||||||| ||||||||| |
|
|
| T |
33858592 |
gtggcacaccctttaaaaaagtatatcaaataaaacatttataaagtaacattggtaggtggcacactataattggtcaatgatatatactattggtacc |
33858691 |
T |
|
| Q |
126 |
ttaacagtacaca |
138 |
Q |
| |
|
|||| ||||||| |
|
|
| T |
33858692 |
ttaatggtacaca |
33858704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 1826384 - 1826251
Alignment:
| Q |
18 |
tgtgccatgtggcatatcctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatatacca |
117 |
Q |
| |
|
|||||||||||||| || |||||||||| ||||||||||||| ||| || || |||| |||| |||||| |||| |||| || ||||||||||||||| |
|
|
| T |
1826384 |
tgtgccatgtggcacatactttaaaaaaatatatcaaataaagcatctacaaagtaatattggtaggtgacacactctaattgaccaatggtatatacca |
1826285 |
T |
|
| Q |
118 |
ttggtaccttaacagtacacaagtggaatccggt |
151 |
Q |
| |
|
||||||| |||| |||||||||||| ||||||| |
|
|
| T |
1826284 |
ttggtactttaatggtacacaagtggtatccggt |
1826251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 29990088 - 29989962
Alignment:
| Q |
18 |
tgtgccatgtggcatatcctttaaaaaat-tatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatatacc |
116 |
Q |
| |
|
|||| ||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||| || |||||||| ||| ||||||||| |||||| | |
|
|
| T |
29990088 |
tgtgacatgtggcacacactttaaaaaacatatatcaaataaaacatttataaagtaacattggtatgtggcacactcttattggtcaatgttatataac |
29989989 |
T |
|
| Q |
117 |
attggtaccttaacagtacacaagtgg |
143 |
Q |
| |
|
|||| |||||||| |||||||||||| |
|
|
| T |
29989988 |
attgataccttaatggtacacaagtgg |
29989962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 33271739 - 33271630
Alignment:
| Q |
18 |
tgtgccatgtggcatatcctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatatacca |
117 |
Q |
| |
|
||||||| ||||| ||||||||||||| ||||||||||||| ||||||| | ||||||||||||| || |||| |||| ||| ||||| |||||| || |
|
|
| T |
33271739 |
tgtgccacgtggcgcatcctttaaaaaaatatatcaaataaagcatttatcaagtaacattgatagatgacacactctaattggccaatgatatatatca |
33271640 |
T |
|
| Q |
118 |
ttggtacctt |
127 |
Q |
| |
|
|||||||||| |
|
|
| T |
33271639 |
ttggtacctt |
33271630 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 13086879 - 13086753
Alignment:
| Q |
18 |
tgtgccatgtggcatatcctttaaaaaatt-atatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatatacc |
116 |
Q |
| |
|
|||| ||||||||| | ||||||||||| ||||||||||||| |||||||| |||||||| || |||||||| ||| ||||||||| |||||| | |
|
|
| T |
13086879 |
tgtgacatgtggcacacactttaaaaaatacatatcaaataaaatatttataaaataacattggtatgtggcacactcttattggtcaatgttatataac |
13086780 |
T |
|
| Q |
117 |
attggtaccttaacagtacacaagtgg |
143 |
Q |
| |
|
||||||||||||| |||||||||||| |
|
|
| T |
13086779 |
attggtaccttaatggtacacaagtgg |
13086753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 143
Target Start/End: Original strand, 38010659 - 38010785
Alignment:
| Q |
18 |
tgtgccatgtggcatatcctttaaaaaat-tatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatatacc |
116 |
Q |
| |
|
|||||||||||||| | |||||||||| ||||||||||||| |||||||| ||||||||| || |||||||| ||| ||| ||||| |||||| | |
|
|
| T |
38010659 |
tgtgccatgtggcacacactttaaaaaacatatatcaaataaagtatttataaagtaacattggtatgtggcacactcttattggccaatgttatataac |
38010758 |
T |
|
| Q |
117 |
attggtaccttaacagtacacaagtgg |
143 |
Q |
| |
|
||||||||||||| |||||||||||| |
|
|
| T |
38010759 |
attggtaccttaatggtacacaagtgg |
38010785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 47 - 148
Target Start/End: Complemental strand, 9827884 - 9827783
Alignment:
| Q |
47 |
tatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatataccattggtaccttaacagtacacaagtggaat |
146 |
Q |
| |
|
|||||||||||||| |||||||| |||| |||| ||||||| ||| |||| || || ||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
9827884 |
tatatcaaataaaatatttataaagtaatattggtaggtggtacactctaattgactaaaggtatataccattggtaccttaatggtacacaagtggaat |
9827785 |
T |
|
| Q |
147 |
cc |
148 |
Q |
| |
|
|| |
|
|
| T |
9827784 |
cc |
9827783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 143
Target Start/End: Original strand, 13478090 - 13478216
Alignment:
| Q |
18 |
tgtgccatgtggcatatcctttaaaaaat-tatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatatacc |
116 |
Q |
| |
|
|||| ||||||||| | |||||||||| |||||||||||||| |||||||| |||||| || || |||||||| ||| ||||||||| |||||| | |
|
|
| T |
13478090 |
tgtgacatgtggcacacactttaaaaaacatatatcaaataaaatatttataaagtaacaatggtatgtggcacactcttattggtcaatgttatataac |
13478189 |
T |
|
| Q |
117 |
attggtaccttaacagtacacaagtgg |
143 |
Q |
| |
|
|||||| |||||| |||||||||||| |
|
|
| T |
13478190 |
attggttccttaatggtacacaagtgg |
13478216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 93
Target Start/End: Complemental strand, 42148254 - 42148196
Alignment:
| Q |
35 |
cctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacatt |
93 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| ||||||||| |||||||| |||| |
|
|
| T |
42148254 |
cctttaaaaaaatatatcaaataaaacatttataaagtaacattggtaggtggctcatt |
42148196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 142
Target Start/End: Original strand, 13421055 - 13421180
Alignment:
| Q |
18 |
tgtgccatgtggcatatcctttaaaaaat-tatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatatacc |
116 |
Q |
| |
|
|||| ||||||||||| |||||||||| ||||| ||||||| ||||||||| |||||||||||| || ||| ||| || |||||| |||||| | |
|
|
| T |
13421055 |
tgtgtcatgtggcatacactttaaaaaacatatattaaataaagcatttataaagtaacattgatatttgatacactcttattgatcaatgttatataac |
13421154 |
T |
|
| Q |
117 |
attggtaccttaacagtacacaagtg |
142 |
Q |
| |
|
|||| |||||||| ||||||||||| |
|
|
| T |
13421155 |
attgataccttaatggtacacaagtg |
13421180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 123
Target Start/End: Complemental strand, 10292997 - 10292893
Alignment:
| Q |
18 |
tgtgccatgtggcatatcctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatatacca |
117 |
Q |
| |
|
||||||| |||||| | ||||||||||| ||||||||||||||| ||| || ||||||| || |||||||||||| ||| ||||| |||||| || |
|
|
| T |
10292997 |
tgtgccacgtggcacaccctttaaaaaaa-atatcaaataaaacacttacaaaataacattagtacgtggcacattcttattggccaatgttatataaca |
10292899 |
T |
|
| Q |
118 |
ttggta |
123 |
Q |
| |
|
|||||| |
|
|
| T |
10292898 |
ttggta |
10292893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 91
Target Start/End: Complemental strand, 37881237 - 37881193
Alignment:
| Q |
47 |
tatatcaaataaaacatttataaggtaacattgataggtggcaca |
91 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||| || |||||||| |
|
|
| T |
37881237 |
tatatcaaataaaatatttataaagtaacattggtatgtggcaca |
37881193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 67; Significance: 1e-29; HSPs: 15)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 26 - 148
Target Start/End: Complemental strand, 44380371 - 44380249
Alignment:
| Q |
26 |
gtggcatatcctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatataccattggtacc |
125 |
Q |
| |
|
|||||| | ||||||||||| ||||||||||||| ||||||||| |||| ||||||||||| |||| | || |||||||| |||||||||||||||||| |
|
|
| T |
44380371 |
gtggcacaccctttaaaaaagtatatcaaataaagcatttataaagtaatattgataggtgacacactataattggtcaatagtatataccattggtacc |
44380272 |
T |
|
| Q |
126 |
ttaacagtacacaagtggaatcc |
148 |
Q |
| |
|
|||| ||||||||||||||||| |
|
|
| T |
44380271 |
ttaatggtacacaagtggaatcc |
44380249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 47426471 - 47426345
Alignment:
| Q |
22 |
ccatgtggcatatcctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatataccattgg |
121 |
Q |
| |
|
|||||||||| | ||||||||||| ||||||||||||| ||| ||||| |||||||||||||||| |||| |||| ||| ||||||||||||| ||||| |
|
|
| T |
47426471 |
ccatgtggcacaccctttaaaaaaatatatcaaataaagcatctataaagtaacattgataggtgacacactctaattggccaatggtatatactattgg |
47426372 |
T |
|
| Q |
122 |
taccttaacagtacacaagtggaatcc |
148 |
Q |
| |
|
|||||||| |||||||||||| |||| |
|
|
| T |
47426371 |
taccttaatggtacacaagtggtatcc |
47426345 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 139
Target Start/End: Complemental strand, 33509805 - 33509684
Alignment:
| Q |
18 |
tgtgccatgtggcatatcctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatatacca |
117 |
Q |
| |
|
|||||||||||||| ||||||||||||| || |||||||||| ||| ||||| |||| |||| ||||||||||| |||| ||||||||| ||||||| | |
|
|
| T |
33509805 |
tgtgccatgtggcacatcctttaaaaaaatacatcaaataaagcatctataaagtaatattggtaggtggcacactctaattggtcaatgatatatacta |
33509706 |
T |
|
| Q |
118 |
ttggtaccttaacagtacacaa |
139 |
Q |
| |
|
|| ||||||||| |||||||| |
|
|
| T |
33509705 |
ttagtaccttaatggtacacaa |
33509684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 35 - 149
Target Start/End: Complemental strand, 50934609 - 50934494
Alignment:
| Q |
35 |
cctttaaa-aaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatataccattggtaccttaacagt |
133 |
Q |
| |
|
|||||||| ||| |||||||||||| ||||||||| ||||||||| || |||||||| |||| ||| ||||||||||||||||||||||||||| || |
|
|
| T |
50934609 |
cctttaaataaaatatatcaaataatgcatttataaagtaacattggtaagtggcacactctaattggccaatggtatataccattggtaccttaatggt |
50934510 |
T |
|
| Q |
134 |
acacaagtggaatccg |
149 |
Q |
| |
|
||||||||| |||||| |
|
|
| T |
50934509 |
acacaagtgaaatccg |
50934494 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 143
Target Start/End: Original strand, 31187115 - 31187241
Alignment:
| Q |
18 |
tgtgccatgtggcatatcctttaaaaaat-tatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatatacc |
116 |
Q |
| |
|
|||| ||||||||| | ||||||||||| ||||||||||||||||||||||| ||||||||| || |||||||| ||| ||||||||| |||||| | |
|
|
| T |
31187115 |
tgtgacatgtggcacacactttaaaaaatatatatcaaataaaacatttataaagtaacattggtatgtggcacactcttattggtcaatgttatataac |
31187214 |
T |
|
| Q |
117 |
attggtaccttaacagtacacaagtgg |
143 |
Q |
| |
|
||||||||||||| ||||| |||||| |
|
|
| T |
31187215 |
attggtaccttaatggtacataagtgg |
31187241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 33 - 149
Target Start/End: Complemental strand, 35094658 - 35094540
Alignment:
| Q |
33 |
atcctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctat--gtggtcaatggtatataccattggtaccttaac |
130 |
Q |
| |
|
||||||||||||| |||||||||||||| |||||||| ||||||||| ||||||||| | ||||| | ||||||||||||||||| |||||| |||| |
|
|
| T |
35094658 |
atcctttaaaaaaatatatcaaataaaatatttataaagtaacattggtaggtggcatactctataattagtcaatggtatataccactggtactttaat |
35094559 |
T |
|
| Q |
131 |
agtacacaagtggaatccg |
149 |
Q |
| |
|
|||| |||||||||||| |
|
|
| T |
35094558 |
ggtactgaagtggaatccg |
35094540 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 26 - 149
Target Start/End: Complemental strand, 17466390 - 17466267
Alignment:
| Q |
26 |
gtggcatatcctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatataccattggtacc |
125 |
Q |
| |
|
|||||||| ||||||||||| |||||||| |||| ||||||||| |||||||||||||||| |||| |||| || ||||| |||||||||||| || |
|
|
| T |
17466390 |
gtggcataccctttaaaaaaatatatcaactaaatcatttataaagtaacattgataggtgacacactctaattgaccaatgatatataccattgatatt |
17466291 |
T |
|
| Q |
126 |
ttaacagtacacaagtggaatccg |
149 |
Q |
| |
|
| || |||||||| ||||||||| |
|
|
| T |
17466290 |
tgaatcgtacacaaatggaatccg |
17466267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 42664799 - 42664673
Alignment:
| Q |
18 |
tgtgccatgtggcatatcctttaaaaaat-tatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatatacc |
116 |
Q |
| |
|
|||| ||||||||| | |||||||||| ||||||||||||||||||||||| |||||||| || |||||||| ||| ||||||||| |||||| | |
|
|
| T |
42664799 |
tgtgacatgtggcacacactttaaaaaacatatatcaaataaaacatttataaaataacattggtatgtggcacactcttattggtcaatgttatataac |
42664700 |
T |
|
| Q |
117 |
attggtaccttaacagtacacaagtgg |
143 |
Q |
| |
|
|||||||||||| |||||||||||| |
|
|
| T |
42664699 |
tttggtaccttaatggtacacaagtgg |
42664673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 47186301 - 47186175
Alignment:
| Q |
18 |
tgtgccatgtggcatatcctttaaaaaat-tatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatatacc |
116 |
Q |
| |
|
|||||||||||||| | |||||||||| ||||||||||||| |||||||| ||||||||| || |||||||| ||| ||| ||||| |||||| | |
|
|
| T |
47186301 |
tgtgccatgtggcacacactttaaaaaacatatatcaaataaagtatttataaagtaacattggtatgtggcacactcttattggccaatgttatataac |
47186202 |
T |
|
| Q |
117 |
attggtaccttaacagtacacaagtgg |
143 |
Q |
| |
|
||||||||||||| |||||||||||| |
|
|
| T |
47186201 |
attggtaccttaatggtacacaagtgg |
47186175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 18 - 145
Target Start/End: Complemental strand, 37742850 - 37742726
Alignment:
| Q |
18 |
tgtgccatgtggcatatcctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatatacca |
117 |
Q |
| |
|
||||||| |||||| | |||||||||| ||||||||||||| |||| ||| ||||||||| ||||||||| | |||| || ||||| ||||||||| |
|
|
| T |
37742850 |
tgtgccacgtggcacactctttaaaaaaatatatcaaataaagcattggtaatgtaacattggtaggtggcatactctaattgaccaatgatatatacca |
37742751 |
T |
|
| Q |
118 |
ttggtaccttaacagtacacaagtggaa |
145 |
Q |
| |
|
|||||||||||| ||||||||||||| |
|
|
| T |
37742750 |
ttggtaccttaa---tacacaagtggaa |
37742726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 47 - 143
Target Start/End: Original strand, 34029366 - 34029462
Alignment:
| Q |
47 |
tatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatataccattggtaccttaacagtacacaagtgg |
143 |
Q |
| |
|
||||||||||||||||||||||| |||||||| || |||||||| ||| || |||||| |||||| |||||||||||||| ||| |||||||| |
|
|
| T |
34029366 |
tatatcaaataaaacatttataaagtaacattagtatgtggcacactcttattgatcaatgttatataacattggtaccttaatggtaaacaagtgg |
34029462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 81 - 148
Target Start/End: Original strand, 32319474 - 32319541
Alignment:
| Q |
81 |
taggtggcacattctatgtggtcaatggtatataccattggtaccttaacagtacacaagtggaatcc |
148 |
Q |
| |
|
||||||||||| |||| ||| ||||||||||||||||||||||||||| |||||||||| |||||| |
|
|
| T |
32319474 |
taggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtagaatcc |
32319541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 81 - 149
Target Start/End: Original strand, 10179872 - 10179940
Alignment:
| Q |
81 |
taggtggcacattctatgtggtcaatggtatataccattggtaccttaacagtacacaagtggaatccg |
149 |
Q |
| |
|
||||||||||| |||| || |||||||||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
10179872 |
taggtggcacactctaattgaccaatggtatataccattggtactttaatggtacacaagtggaatccg |
10179940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 141
Target Start/End: Original strand, 39498724 - 39498838
Alignment:
| Q |
26 |
gtggcatatcctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatataccattggtacc |
125 |
Q |
| |
|
|||||| ||||||||||| ||||||| |||||||| |||||||| |||||| |||||||| |||| | || || |||| |||||| ||||||||| |
|
|
| T |
39498724 |
gtggcacatcctttaaaa-attatattaaataaaatatttataaaataacatcgataggtgacacactttaattgaccaataatatatatcattggtact |
39498822 |
T |
|
| Q |
126 |
ttaacagtacacaagt |
141 |
Q |
| |
|
|||| |||||||||| |
|
|
| T |
39498823 |
ttaatggtacacaagt |
39498838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 149
Target Start/End: Original strand, 10018697 - 10018743
Alignment:
| Q |
103 |
caatggtatataccattggtaccttaacagtacacaagtggaatccg |
149 |
Q |
| |
|
|||||||||||| ||||||||| |||| |||||||||||||||||| |
|
|
| T |
10018697 |
caatggtatataacattggtactttaatggtacacaagtggaatccg |
10018743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 63; Significance: 3e-27; HSPs: 8)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 148
Target Start/End: Original strand, 41179609 - 41179739
Alignment:
| Q |
18 |
tgtgccatgtggcatatcctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatatacca |
117 |
Q |
| |
|
|||||||||||||| |||| |||||||| ||||| ||||||||||||||||| ||||||| | |||||| |||| | || ||| ||||| |||||| || |
|
|
| T |
41179609 |
tgtgccatgtggcacatccattaaaaaaatatattaaataaaacatttataaagtaacatcggtaggtgacacactttaattggccaatgatatatatca |
41179708 |
T |
|
| Q |
118 |
ttggtaccttaacagtacacaagtggaatcc |
148 |
Q |
| |
|
|||||||||||| ||||||||||||||||| |
|
|
| T |
41179709 |
ttggtaccttaatggtacacaagtggaatcc |
41179739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 148
Target Start/End: Original strand, 24337876 - 24338006
Alignment:
| Q |
18 |
tgtgccatgtggcatatcctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatatacca |
117 |
Q |
| |
|
||||| |||||||| | |||||||||| ||||||||||||| ||| ||||| ||||||||| ||| ||||||| |||| || | ||||||||||||| |
|
|
| T |
24337876 |
tgtgctatgtggcacaccctttaaaaatatatatcaaataaagcatctataaagtaacattggtagatggcacactctaattgaccgatggtatatacca |
24337975 |
T |
|
| Q |
118 |
ttggtaccttaacagtacacaagtggaatcc |
148 |
Q |
| |
|
||| |||||||| ||||||||||||| |||| |
|
|
| T |
24337976 |
ttgctaccttaatagtacacaagtggtatcc |
24338006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 37 - 143
Target Start/End: Complemental strand, 1514910 - 1514803
Alignment:
| Q |
37 |
tttaaaaaat-tatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatataccattggtaccttaacagtac |
135 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| ||||||||| || |||| ||| ||| || |||||| |||||| |||||||||||||| |||| |
|
|
| T |
1514910 |
tttaaaaaatatatatcaaataaaacatttataaagtaacattggtatgtggtacactcttattgatcaatgttatataacattggtaccttaatggtac |
1514811 |
T |
|
| Q |
136 |
acaagtgg |
143 |
Q |
| |
|
|||||||| |
|
|
| T |
1514810 |
acaagtgg |
1514803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 26 - 147
Target Start/End: Original strand, 11254082 - 11254202
Alignment:
| Q |
26 |
gtggcatatcctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatataccattggtacc |
125 |
Q |
| |
|
|||||| | |||||||||| ||||||||||||||||||||||| ||||||||| ||||||| | | | || ||||||||| |||||| |||||||| |
|
|
| T |
11254082 |
gtggcacaccctttaaaaatgtatatcaaataaaacatttataaagtaacattggtaggtggtatactata-atggtcaatgatatatatcattggtaat |
11254180 |
T |
|
| Q |
126 |
ttaacagtacacaagtggaatc |
147 |
Q |
| |
|
|||| |||||||||||||||| |
|
|
| T |
11254181 |
ttaatggtacacaagtggaatc |
11254202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 17 - 129
Target Start/End: Complemental strand, 18168512 - 18168399
Alignment:
| Q |
17 |
ttgtgccatgtggcatatcctttaaaaaat-tatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatatac |
115 |
Q |
| |
|
||||| || |||||| ||||||||||||| ||||||||||||| |||||||| |||| |||| ||||||| ||| |||| || |||||| ||||||| |
|
|
| T |
18168512 |
ttgtgtcacgtggcacatcctttaaaaaaaatatatcaaataaagtatttataaagtaagattggtaggtgggacactctaattgatcaatgatatatac |
18168413 |
T |
|
| Q |
116 |
cattggtaccttaa |
129 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
18168412 |
cattggtaccttaa |
18168399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 17 - 129
Target Start/End: Complemental strand, 18632069 - 18631956
Alignment:
| Q |
17 |
ttgtgccatgtggcatatcctttaaaaaat-tatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatatac |
115 |
Q |
| |
|
||||| || |||||| ||||||||||||| ||||||||||||| |||||||| |||| |||| ||||||| ||| |||| || |||||| ||||||| |
|
|
| T |
18632069 |
ttgtgtcacgtggcacatcctttaaaaaaaatatatcaaataaagtatttataaagtaagattggtaggtgggacactctaattgatcaatgatatatac |
18631970 |
T |
|
| Q |
116 |
cattggtaccttaa |
129 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
18631969 |
cattggtaccttaa |
18631956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 4708353 - 4708463
Alignment:
| Q |
18 |
tgtgccatgtggcatatcctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatatacca |
117 |
Q |
| |
|
||||||| |||||| | |||||||||| ||||||||||||||||||||||| ||||||||| |||||| |||| | || ||| ||| ||||| ||| |
|
|
| T |
4708353 |
tgtgccacgtggcacaccctttaaaaatatatatcaaataaaacatttataaagtaacattggtaggtgacacactttaattggcgcatgatatatgcca |
4708452 |
T |
|
| Q |
118 |
ttggtacctta |
128 |
Q |
| |
|
||||||||||| |
|
|
| T |
4708453 |
ttggtacctta |
4708463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 142
Target Start/End: Original strand, 32825881 - 32826005
Alignment:
| Q |
18 |
tgtgccatgtggcatatcctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatatacca |
117 |
Q |
| |
|
|||| |||||| || | ||||| ||||| |||||||||||||||| ||||| ||||||||||| ||| || | |||| ||| |||||||||| | || |
|
|
| T |
32825881 |
tgtgtcatgtgacacaaccttttaaaaaatatatcaaataaaacacatataaaataacattgatatgtgacatactctaattggccaatggtatacaaca |
32825980 |
T |
|
| Q |
118 |
ttggtaccttaacagtacacaagtg |
142 |
Q |
| |
|
||| ||| |||| ||||||||||| |
|
|
| T |
32825981 |
ttgatactttaatggtacacaagtg |
32826005 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 60; Significance: 2e-25; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 1211890 - 1212021
Alignment:
| Q |
18 |
tgtgccatgtggcatatcctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatatacca |
117 |
Q |
| |
|
||||||| |||||| | ||||||||||| ||||||||||||| ||| |||| |||||||||| |||||||||| ||| | | ||||||||||||||| |
|
|
| T |
1211890 |
tgtgccacgtggcacaccctttaaaaaaatatatcaaataaagcatcgataaagtaacattgaaaggtggcacacactaattagccaatggtatatacca |
1211989 |
T |
|
| Q |
118 |
ttggtaccttaacagtacacaagtggaatccg |
149 |
Q |
| |
|
|||||||||||| ||||||||||| |||||| |
|
|
| T |
1211990 |
ttggtaccttaatggtacacaagtgaaatccg |
1212021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 35 - 148
Target Start/End: Original strand, 5403939 - 5404052
Alignment:
| Q |
35 |
cctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatataccattggtaccttaacagta |
134 |
Q |
| |
|
||||||||||| ||||||||||||||||| ||||| ||||||||| ||||||||| | |||| || |||| ||||||||||| ||||||||| ||| |
|
|
| T |
5403939 |
cctttaaaaaaatatatcaaataaaacatctataaagtaacattggtaggtggcagactctaactgaccaataatatataccattagtaccttaatggta |
5404038 |
T |
|
| Q |
135 |
cacaagtggaatcc |
148 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
5404039 |
cacaagtggtatcc |
5404052 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 34245693 - 34245567
Alignment:
| Q |
18 |
tgtgccatgtggcatatcctttaaaaaat-tatatcaaataaaacatttataaggtaacattgataggtggcaca-ttctatgtggtcaatggtatatac |
115 |
Q |
| |
|
|||| ||||||||| | |||||||||| ||||||||||||| |||||||| ||||||||| || |||||||| || ||| ||||||||| |||||| |
|
|
| T |
34245693 |
tgtgtcatgtggcacacactttaaaaaacatatatcaaataaagtatttataaagtaacattggtacgtggcacacttttat-tggtcaatgttatataa |
34245595 |
T |
|
| Q |
116 |
cattggtaccttaacagtacacaagtgg |
143 |
Q |
| |
|
|||| |||||||| |||||||||||| |
|
|
| T |
34245594 |
cattaataccttaatggtacacaagtgg |
34245567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 142
Target Start/End: Complemental strand, 11113677 - 11113557
Alignment:
| Q |
18 |
tgtgccatgtggcatatcctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatatacca |
117 |
Q |
| |
|
||||||||||||| ||||||||||||| |||||||||| || ||| || |||||||| || ||| |||| ||| | ||||||| |||||| || |
|
|
| T |
11113677 |
tgtgccatgtggcgcatcctttaaaaaa----atcaaataaagcacttacaaagtaacattagtatgtgacacactcttattagtcaatgttatatagca |
11113582 |
T |
|
| Q |
118 |
ttggtaccttaacagtacacaagtg |
142 |
Q |
| |
|
|||||||||||| ||||||||||| |
|
|
| T |
11113581 |
ttggtaccttaatggtacacaagtg |
11113557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 105 - 143
Target Start/End: Complemental strand, 11753205 - 11753167
Alignment:
| Q |
105 |
atggtatataccattggtaccttaacagtacacaagtgg |
143 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
11753205 |
atggtatataccattggtaccttaatggtacacaagtgg |
11753167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0032 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0032
Description:
Target: scaffold0032; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 34301 - 34186
Alignment:
| Q |
35 |
cctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatataccattggtaccttaacagta |
134 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||||| |||| |||| || |||||||| |||| ||| |||| ||||||||||||||||||||| ||| |
|
|
| T |
34301 |
cctttaaaaaat-atatcaaataaaatatttataaagtaatattggtaagtggcacactctaattggccaataatatataccattggtaccttaatggta |
34203 |
T |
|
| Q |
135 |
cacaagtggaatccggt |
151 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
34202 |
cacaagtggaatccggt |
34186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0229 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0229
Description:
Target: scaffold0229; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 35 - 149
Target Start/End: Original strand, 13069 - 13183
Alignment:
| Q |
35 |
cctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatataccattggtaccttaacagta |
134 |
Q |
| |
|
||||||||||| ||||||||||||| ||| |||| |||||||||| |||||||||| ||| | | ||||||||||||||||||||||||||| ||| |
|
|
| T |
13069 |
cctttaaaaaaatatatcaaataaagcatcgataaagtaacattgaaaggtggcacacactaattagccaatggtatataccattggtaccttaatggta |
13168 |
T |
|
| Q |
135 |
cacaagtggaatccg |
149 |
Q |
| |
|
|||||||| |||||| |
|
|
| T |
13169 |
cacaagtgaaatccg |
13183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0519 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0519
Description:
Target: scaffold0519; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 26 - 147
Target Start/End: Complemental strand, 11311 - 11191
Alignment:
| Q |
26 |
gtggcatatcctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatataccattggtacc |
125 |
Q |
| |
|
|||||| | |||||||||| ||||||||||||||||||||||| ||||||||| ||||||| | | | || ||||||||| |||||| |||||||| |
|
|
| T |
11311 |
gtggcacaccctttaaaaatgtatatcaaataaaacatttataaagtaacattggtaggtggtatactata-atggtcaatgatatatatcattggtaat |
11213 |
T |
|
| Q |
126 |
ttaacagtacacaagtggaatc |
147 |
Q |
| |
|
|||| |||||||||||||||| |
|
|
| T |
11212 |
ttaatggtacacaagtggaatc |
11191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0263 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0263
Description:
Target: scaffold0263; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 113
Target Start/End: Original strand, 23153 - 23240
Alignment:
| Q |
26 |
gtggcatatcctttaaaaaattatatcaaataaaacatttataaggtaacattgataggtggcacattctatgtggtcaatggtatat |
113 |
Q |
| |
|
||||| |||||||| ||||| |||||||||||||| |||||||| |||| |||| ||||||||||| |||| ||| ||||| ||||| |
|
|
| T |
23153 |
gtggcgtatccttttaaaaaatatatcaaataaaatatttataaagtaaaattggtaggtggcacactctaattggccaatgatatat |
23240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0041 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0041
Description:
Target: scaffold0041; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 47 - 119
Target Start/End: Complemental strand, 73168 - 73095
Alignment:
| Q |
47 |
tatatcaaataaaa-catttataaggtaacattgataggtggcacattctatgtggtcaatggtatataccatt |
119 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||||||||| || |||||||| || ||||||||||||||||| |
|
|
| T |
73168 |
tatatcaaataaaagcatttataaagtaacattgatagatgagacattctaattgaccaatggtatataccatt |
73095 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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