View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15503_low_7 (Length: 459)

Name: NF15503_low_7
Description: NF15503
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15503_low_7
NF15503_low_7
[»] chr4 (3 HSPs)
chr4 (298-405)||(43302249-43302356)
chr4 (136-187)||(43302047-43302098)
chr4 (15-71)||(43301910-43301966)
[»] scaffold0074 (2 HSPs)
scaffold0074 (297-405)||(17149-17257)
scaffold0074 (15-71)||(17810-17866)
[»] scaffold0028 (1 HSPs)
scaffold0028 (297-405)||(20960-21068)
[»] scaffold0209 (1 HSPs)
scaffold0209 (297-405)||(14943-15051)
[»] chr6 (5 HSPs)
chr6 (297-405)||(20623237-20623345)
chr6 (344-405)||(9289995-9290056)
chr6 (136-187)||(20623509-20623561)
chr6 (201-282)||(20623397-20623480)
chr6 (15-72)||(20623637-20623694)
[»] chr1 (4 HSPs)
chr1 (297-401)||(27305764-27305868)
chr1 (300-405)||(18385687-18385792)
chr1 (15-71)||(27305439-27305495)
chr1 (136-186)||(27305554-27305604)
[»] scaffold0006 (1 HSPs)
scaffold0006 (310-405)||(70984-71079)
[»] chr8 (2 HSPs)
chr8 (297-405)||(5658557-5658665)
chr8 (15-71)||(5659043-5659099)
[»] chr7 (3 HSPs)
chr7 (297-391)||(43940680-43940774)
chr7 (15-69)||(43941074-43941128)
chr7 (139-183)||(43940958-43941002)
[»] chr3 (3 HSPs)
chr3 (15-71)||(13205889-13205945)
chr3 (349-405)||(13206271-13206327)
chr3 (138-185)||(13206021-13206068)
[»] chr5 (9 HSPs)
chr5 (15-71)||(25072048-25072104)
chr5 (15-71)||(25130019-25130075)
chr5 (312-405)||(19537112-19537205)
chr5 (360-405)||(25071650-25071695)
chr5 (360-405)||(25129622-25129667)
chr5 (297-338)||(25071708-25071749)
chr5 (249-282)||(25071801-25071834)
chr5 (297-338)||(25129680-25129721)
chr5 (249-282)||(25129773-25129806)
[»] chr2 (1 HSPs)
chr2 (312-405)||(26214890-26214983)


Alignment Details
Target: chr4 (Bit Score: 88; Significance: 4e-42; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 298 - 405
Target Start/End: Original strand, 43302249 - 43302356
Alignment:
Q  298 ttaattgtgcggtaatattttgttaataccgacagtcgaaactgtcgtaatgtacagtaaaaagcggcggtcaatgaaactgccgcaatacactggttat 397  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||   |||| ||||||||||||||||||||||||    
T  43302249 ttaattgtgcggtaatattttgttaataccgacagtcgaaactgccgtaatgtacagtaaaaagcggcatccaataaaactgccgcaatacactggttat 43302348  T
Q  398 agtggcgg 405  Q
    ||||||||    
T  43302349 agtggcgg 43302356  T

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Target: chr4; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 136 - 187
Target Start/End: Original strand, 43302047 - 43302098
Alignment:
Q  136 tgagaaaaagaatgaatttttacttataaaatattattttatgtgttaaggg 187  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  43302047 tgagaaaaagaatgaattttttgttataaaatattattttatgtgttaaggg 43302098  T

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Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 43301910 - 43301966
Alignment:
Q  15 acctgtgaaggaagtgagacggagagtgacggaaggaaaagcggtggccggagagac 71  Q
    ||||| ||||||||||||| |||||||||||||||| | ||||||||||||||||||    
T  43301910 acctgagaaggaagtgagatggagagtgacggaagggagagcggtggccggagagac 43301966  T

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Target: scaffold0074 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 297 - 405
Target Start/End: Complemental strand, 17257 - 17149
Alignment:
Q  297 gttaattgtgcggtaatattttgttaataccgacagtcgaaactgtcgtaatgtacagtaaaaagcggcggtcaatgaaactgccgcaatacactggtta 396  Q
    |||||||||||  ||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  17257 gttaattgtgccataatattttgttaataccggcagtcgaaaccgccgtaatgtacagtaaaaagcggcggtcaataaaactgccgcaatacactggtta 17158  T
Q  397 tagtggcgg 405  Q
    |||||||||    
T  17157 tagtggcgg 17149  T

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Target: scaffold0074; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 17866 - 17810
Alignment:
Q  15 acctgtgaaggaagtgagacggagagtgacggaaggaaaagcggtggccggagagac 71  Q
    ||||| |||||||||||||| ||||||| ||||||| ||||||||||||||||||||    
T  17866 acctgagaaggaagtgagacagagagtgtcggaagggaaagcggtggccggagagac 17810  T

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Target: scaffold0028 (Bit Score: 81; Significance: 6e-38; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 297 - 405
Target Start/End: Original strand, 20960 - 21068
Alignment:
Q  297 gttaattgtgcggtaatattttgttaataccgacagtcgaaactgtcgtaatgtacagtaaaaagcggcggtcaatgaaactgccgcaatacactggtta 396  Q
    |||||||||||  ||||||||||||||||||| |||||||||| | ||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  20960 gttaattgtgccataatattttgttaataccggcagtcgaaaccgccgtaatgtacagtaaaaggcggcggtcaataaaactgccgcaatacactggtta 21059  T
Q  397 tagtggcgg 405  Q
    |||||||||    
T  21060 tagtggcgg 21068  T

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Target: scaffold0209 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 297 - 405
Target Start/End: Complemental strand, 15051 - 14943
Alignment:
Q  297 gttaattgtgcggtaatattttgttaataccgacagtcgaaactgtcgtaatgtacagtaaaaagcggcggtcaatgaaactgccgcaatacactggtta 396  Q
    ||||| |||||  |||||||||||| |||||| |||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15051 gttaactgtgccataatattttgttgataccggcagtcgaaaccgccgtaatgtacagtaaaaagcggcggtcaataaaactgccgcaatacactggtta 14952  T
Q  397 tagtggcgg 405  Q
    |||||||||    
T  14951 tagtggcgg 14943  T

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Target: chr6 (Bit Score: 77; Significance: 1e-35; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 297 - 405
Target Start/End: Complemental strand, 20623345 - 20623237
Alignment:
Q  297 gttaattgtgcggtaatattttgttaataccgacagtcgaaactgtcgtaatgtacagtaaaaagcggcggtcaatgaaactgccgcaatacactggtta 396  Q
    |||||||||||||||||||||||||||||||| |||||||||| | || |||||||||||||||||||| | |||| ||||||||||||||||| |||||    
T  20623345 gttaattgtgcggtaatattttgttaataccggcagtcgaaaccgccgcaatgtacagtaaaaagcggcagccaataaaactgccgcaatacacgggtta 20623246  T
Q  397 tagtggcgg 405  Q
    |||||||||    
T  20623245 tagtggcgg 20623237  T

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Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 344 - 405
Target Start/End: Complemental strand, 9290056 - 9289995
Alignment:
Q  344 gtaatgtacagtaaaaagcggcggtcaatgaaactgccgcaatacactggttatagtggcgg 405  Q
    ||||||||||||||||||||||   |||| ||||||||||||||||||||| ||||||||||    
T  9290056 gtaatgtacagtaaaaagcggcaaccaataaaactgccgcaatacactggtcatagtggcgg 9289995  T

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Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 136 - 187
Target Start/End: Complemental strand, 20623561 - 20623509
Alignment:
Q  136 tgagaaaaagaatgaattttta-cttataaaatattattttatgtgttaaggg 187  Q
    ||||||||||||| |||||||  ||||||||||||||||||||||||||||||    
T  20623561 tgagaaaaagaataaatttttttcttataaaatattattttatgtgttaaggg 20623509  T

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Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 282
Target Start/End: Complemental strand, 20623480 - 20623397
Alignment:
Q  201 gaggaaaagaatagaaaagggattttctaccattttagggnnnnnnnt--gagggaagtaagtgcgccaaatgttgtgtagttg 282  Q
    ||||||||||| || ||||||||||||||| |||||||||          |||||||||||||||||||||||||||| |||||    
T  20623480 gaggaaaagaaaaggaaagggattttctacaattttagggaaaaaaaaaagagggaagtaagtgcgccaaatgttgtggagttg 20623397  T

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Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 20623694 - 20623637
Alignment:
Q  15 acctgtgaaggaagtgagacggagagtgacggaaggaaaagcggtggccggagagacg 72  Q
    ||||| ||||||||||||| | |||||||||||| | ||||||||  |||||||||||    
T  20623694 acctgagaaggaagtgagatgtagagtgacggaaaggaaagcggtttccggagagacg 20623637  T

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Target: chr1 (Bit Score: 73; Significance: 4e-33; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 297 - 401
Target Start/End: Original strand, 27305764 - 27305868
Alignment:
Q  297 gttaattgtgcggtaatattttgttaataccgacagtcgaaactgtcgtaatgtacagtaaaaagcggcggtcaatgaaactgccgcaatacactggtta 396  Q
    ||||||||||| |||||||||||||||||||  |||||||||  | ||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  27305764 gttaattgtgccgtaatattttgttaataccagcagtcgaaatcgccgtaatgtacagtaaaaagcggcggccaataaaactgccgcaatacactggtta 27305863  T
Q  397 tagtg 401  Q
    |||||    
T  27305864 tagtg 27305868  T

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Target: chr1; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 300 - 405
Target Start/End: Complemental strand, 18385792 - 18385687
Alignment:
Q  300 aattgtgcggtaatattttgttaataccgacagtcgaaactgtcgtaatgtacagtaaaaagcggcggtcaatgaaactgccgcaatacactggttatag 399  Q
    ||||||||  ||||||||||| ||||||  |||||||||| | |||||| ||| ||| |||||||||||||  ||||||||||||||||||||| |||||    
T  18385792 aattgtgccataatattttgtaaataccagcagtcgaaaccgccgtaatataccgtacaaagcggcggtcagagaaactgccgcaatacactggatatag 18385693  T
Q  400 tggcgg 405  Q
    ||||||    
T  18385692 tggcgg 18385687  T

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Target: chr1; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 27305439 - 27305495
Alignment:
Q  15 acctgtgaaggaagtgagacggagagtgacggaaggaaaagcggtggccggagagac 71  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  27305439 acctgagaaggaagtgagacggagagtgacggaagggaaagcggtggccggagagac 27305495  T

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Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 186
Target Start/End: Original strand, 27305554 - 27305604
Alignment:
Q  136 tgagaaaaagaatgaatttttacttataaaatattattttatgtgttaagg 186  Q
    ||||||||||||||||  |||  ||||||||||||||||||||||||||||    
T  27305554 tgagaaaaagaatgaacattttgttataaaatattattttatgtgttaagg 27305604  T

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Target: scaffold0006 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 310 - 405
Target Start/End: Original strand, 70984 - 71079
Alignment:
Q  310 taatattttgttaataccgacagtcgaaactgtcgtaatgtacagtaaaaagcggcggtcaatgaaactgccgcaatacactggttatagtggcgg 405  Q
    ||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||  | | ||||||||||||||||||||||||||||||||    
T  70984 taatattttgttaataccggcagtcgaaaccgccgtaatgtacagtaaaaagcggcggcaattaaaactgccgcaatacactggttatagtggcgg 71079  T

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Target: chr8 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 297 - 405
Target Start/End: Complemental strand, 5658665 - 5658557
Alignment:
Q  297 gttaattgtgcggtaatattttgttaataccgacagtcgaaactgtcgtaatgtacagtaaaaagcggcggtcaatgaaactgccgcaatacactggtta 396  Q
    |||||||||||  |||||||||||| |||||| |||||||||| | |||||||||||| |||||||||||| ||   |||||||||||||||||||||||    
T  5658665 gttaattgtgccataatattttgttcataccggcagtcgaaaccgccgtaatgtacagaaaaaagcggcggccataaaaactgccgcaatacactggtta 5658566  T
Q  397 tagtggcgg 405  Q
    |||||||||    
T  5658565 tagtggcgg 5658557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 5659099 - 5659043
Alignment:
Q  15 acctgtgaaggaagtgagacggagagtgacggaaggaaaagcggtggccggagagac 71  Q
    ||||| |||||||||||||||| |||||||||||   ||||||||||||||||||||    
T  5659099 acctgagaaggaagtgagacggcgagtgacggaatcgaaagcggtggccggagagac 5659043  T

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Target: chr7 (Bit Score: 63; Significance: 3e-27; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 297 - 391
Target Start/End: Complemental strand, 43940774 - 43940680
Alignment:
Q  297 gttaattgtgcggtaatattttgttaataccgacagtcgaaactgtcgtaatgtacagtaaaaagcggcggtcaatgaaactgccgcaatacact 391  Q
    |||||||||||  ||||||||||||||||||| ||||||||||   ||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  43940774 gttaattgtgccataatattttgttaataccggcagtcgaaaccaccgtaatgtacaataaaaagcggcggtcaataaaactgccgcaatacact 43940680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 43941128 - 43941074
Alignment:
Q  15 acctgtgaaggaagtgagacggagagtgacggaaggaaaagcggtggccggagag 69  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  43941128 acctgagaaggaagtgagacggagagtgacggaagggaaagcggtggccggagag 43941074  T

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Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 43941002 - 43940958
Alignment:
Q  139 gaaaaagaatgaatttttacttataaaatattattttatgtgtta 183  Q
    ||||||||||||| ||||  ||||||||||| |||||||||||||    
T  43941002 gaaaaagaatgaagttttttttataaaatataattttatgtgtta 43940958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 7e-19; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 13205889 - 13205945
Alignment:
Q  15 acctgtgaaggaagtgagacggagagtgacggaaggaaaagcggtggccggagagac 71  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  13205889 acctgagaaggaagtgagacggagagtgacggaagggaaagcggtggccggagagac 13205945  T

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Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 349 - 405
Target Start/End: Original strand, 13206271 - 13206327
Alignment:
Q  349 gtacagtaaaaagcggcggtcaatgaaactgccgcaatacactggttatagtggcgg 405  Q
    ||||| |||||||||||||| ||| ||||||||||||||||||||||||||| ||||    
T  13206271 gtacaataaaaagcggcggtgaataaaactgccgcaatacactggttatagtagcgg 13206327  T

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Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 138 - 185
Target Start/End: Original strand, 13206021 - 13206068
Alignment:
Q  138 agaaaaagaatgaatttttacttataaaatattattttatgtgttaag 185  Q
    |||||||||||||| ||||  |||||||||||||||||||||||||||    
T  13206021 agaaaaagaatgaagtttttgttataaaatattattttatgtgttaag 13206068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 25072104 - 25072048
Alignment:
Q  15 acctgtgaaggaagtgagacggagagtgacggaaggaaaagcggtggccggagagac 71  Q
    ||||| |||||||||||||||||||||||||||| | || |||||||||||||||||    
T  25072104 acctgagaaggaagtgagacggagagtgacggaatggaacgcggtggccggagagac 25072048  T

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Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 25130075 - 25130019
Alignment:
Q  15 acctgtgaaggaagtgagacggagagtgacggaaggaaaagcggtggccggagagac 71  Q
    ||||| |||||||||||||||||||||||||||| | || |||||||||||||||||    
T  25130075 acctgagaaggaagtgagacggagagtgacggaatggaacgcggtggccggagagac 25130019  T

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Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 312 - 405
Target Start/End: Complemental strand, 19537205 - 19537112
Alignment:
Q  312 atattttgttaataccgacagtcgaaactgtcgtaatgtacagtaaaaagcggcggtcaatgaaactgccgcaatacactggttatagtggcgg 405  Q
    ||||||||||||||| | | ||  |||| | |||||||||| |||||||||||||| ||   ||||||||||||||||| || |||||||||||    
T  19537205 atattttgttaatactggcggttaaaaccgccgtaatgtaccgtaaaaagcggcggacataaaaactgccgcaatacacaggatatagtggcgg 19537112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 360 - 405
Target Start/End: Complemental strand, 25071695 - 25071650
Alignment:
Q  360 agcggcggtcaatgaaactgccgcaatacactggttatagtggcgg 405  Q
    |||||||| |||| |||||||||||||||||| |||||||||||||    
T  25071695 agcggcggccaataaaactgccgcaatacactagttatagtggcgg 25071650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 360 - 405
Target Start/End: Complemental strand, 25129667 - 25129622
Alignment:
Q  360 agcggcggtcaatgaaactgccgcaatacactggttatagtggcgg 405  Q
    |||||||| |||| |||||||||||||||||| |||||||||||||    
T  25129667 agcggcggccaataaaactgccgcaatacactagttatagtggcgg 25129622  T

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Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 338
Target Start/End: Complemental strand, 25071749 - 25071708
Alignment:
Q  297 gttaattgtgcggtaatattttgttaataccgacagtcgaaa 338  Q
    |||||||||||  ||||||||||||||||||| |||||||||    
T  25071749 gttaattgtgccataatattttgttaataccggcagtcgaaa 25071708  T

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Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 282
Target Start/End: Complemental strand, 25071834 - 25071801
Alignment:
Q  249 gagggaagtaagtgcgccaaatgttgtgtagttg 282  Q
    |||||||||||||||||||||||||||| |||||    
T  25071834 gagggaagtaagtgcgccaaatgttgtggagttg 25071801  T

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Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 338
Target Start/End: Complemental strand, 25129721 - 25129680
Alignment:
Q  297 gttaattgtgcggtaatattttgttaataccgacagtcgaaa 338  Q
    |||||||||||  ||||||||||||||||||| |||||||||    
T  25129721 gttaattgtgccataatattttgttaataccggcagtcgaaa 25129680  T

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Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 282
Target Start/End: Complemental strand, 25129806 - 25129773
Alignment:
Q  249 gagggaagtaagtgcgccaaatgttgtgtagttg 282  Q
    |||||||||||||||||||||||||||| |||||    
T  25129806 gagggaagtaagtgcgccaaatgttgtggagttg 25129773  T

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Target: chr2 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 312 - 405
Target Start/End: Complemental strand, 26214983 - 26214890
Alignment:
Q  312 atattttgttaataccgacagtcgaaactgtcgtaatgtacagtaaaaagcggcggtcaatgaaactgccgcaatacactggttatagtggcgg 405  Q
    ||||||||||||||| | | ||  |||| | |||||||||| |||||||||||||| ||   ||||||||||||||||  || |||||||||||    
T  26214983 atattttgttaatactggcggttaaaaccgccgtaatgtaccgtaaaaagcggcggacataaaaactgccgcaatacataggatatagtggcgg 26214890  T

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