View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15507_high_4 (Length: 440)

Name: NF15507_high_4
Description: NF15507
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15507_high_4
NF15507_high_4
[»] chr1 (51 HSPs)
chr1 (15-255)||(47295588-47295828)
chr1 (15-252)||(51370211-51370447)
chr1 (15-252)||(16010492-16010725)
chr1 (15-252)||(4362197-4362430)
chr1 (15-180)||(30562269-30562434)
chr1 (15-178)||(8424388-8424551)
chr1 (15-249)||(45339073-45339305)
chr1 (15-252)||(11751504-11751736)
chr1 (15-180)||(45377801-45377966)
chr1 (15-252)||(2759012-2759245)
chr1 (284-380)||(47295463-47295559)
chr1 (15-231)||(27089692-27089907)
chr1 (21-252)||(1825063-1825291)
chr1 (30-252)||(39737311-39737528)
chr1 (15-168)||(7287177-7287330)
chr1 (89-252)||(6136029-6136187)
chr1 (15-249)||(25412168-25412399)
chr1 (15-252)||(41157898-41158132)
chr1 (15-168)||(642647-642800)
chr1 (18-157)||(10157958-10158098)
chr1 (15-163)||(4441135-4441283)
chr1 (15-242)||(46998083-46998303)
chr1 (113-252)||(3022697-3022833)
chr1 (34-180)||(20953031-20953177)
chr1 (15-252)||(45756076-45756309)
chr1 (15-135)||(3839321-3839441)
chr1 (15-180)||(22863248-22863411)
chr1 (15-180)||(4402143-4402308)
chr1 (15-180)||(17391600-17391766)
chr1 (35-168)||(11862573-11862706)
chr1 (21-180)||(45621560-45621721)
chr1 (18-154)||(14346248-14346384)
chr1 (192-252)||(29639605-29639665)
chr1 (38-168)||(18379196-18379325)
chr1 (15-72)||(29639674-29639731)
chr1 (192-253)||(29987608-29987669)
chr1 (15-71)||(23757311-23757367)
chr1 (192-252)||(37696158-37696218)
chr1 (15-177)||(23981354-23981516)
chr1 (192-252)||(642533-642594)
chr1 (15-54)||(3022658-3022697)
chr1 (38-168)||(35718442-35718575)
chr1 (192-252)||(3839193-3839254)
chr1 (60-165)||(37696593-37696698)
chr1 (140-179)||(47646287-47646326)
chr1 (120-178)||(41463373-41463431)
chr1 (47-168)||(42323441-42323562)
chr1 (192-238)||(44078450-44078496)
chr1 (35-168)||(65142-65275)
chr1 (192-252)||(4441048-4441109)
chr1 (21-89)||(28397398-28397466)
[»] chr8 (42 HSPs)
chr8 (15-252)||(30469371-30469607)
chr8 (15-252)||(40691165-40691396)
chr8 (48-252)||(2510494-2510694)
chr8 (18-252)||(38995967-38996197)
chr8 (18-252)||(44601989-44602219)
chr8 (15-252)||(22738598-22738833)
chr8 (15-168)||(21019754-21019907)
chr8 (15-252)||(39139344-39139578)
chr8 (15-151)||(31587920-31588056)
chr8 (15-249)||(2062520-2062749)
chr8 (15-252)||(25107269-25107497)
chr8 (15-252)||(660772-661005)
chr8 (15-252)||(1222207-1222440)
chr8 (15-252)||(10811892-10812126)
chr8 (17-252)||(2374283-2374514)
chr8 (18-168)||(31955654-31955804)
chr8 (15-180)||(9617298-9617460)
chr8 (15-177)||(10710063-10710223)
chr8 (15-252)||(3457779-3458010)
chr8 (15-150)||(17006324-17006458)
chr8 (15-150)||(17570790-17570924)
chr8 (86-252)||(44652442-44652602)
chr8 (89-252)||(2620066-2620225)
chr8 (15-135)||(254853-254973)
chr8 (15-109)||(19972986-19973079)
chr8 (52-248)||(16997990-16998183)
chr8 (15-105)||(17988945-17989034)
chr8 (15-135)||(846683-846803)
chr8 (15-180)||(35458784-35458944)
chr8 (192-252)||(255088-255148)
chr8 (192-252)||(846508-846568)
chr8 (18-85)||(2621410-2621477)
chr8 (15-71)||(9552507-9552563)
chr8 (192-252)||(39628688-39628748)
chr8 (192-252)||(39638238-39638298)
chr8 (15-71)||(40554397-40554453)
chr8 (121-180)||(9552632-9552691)
chr8 (49-148)||(17949841-17949940)
chr8 (192-252)||(21019950-21020010)
chr8 (192-252)||(40554231-40554291)
chr8 (284-333)||(44652361-44652410)
chr8 (193-252)||(15727100-15727160)
[»] chr4 (41 HSPs)
chr4 (15-252)||(4576561-4576794)
chr4 (15-252)||(6892899-6893132)
chr4 (15-168)||(34510383-34510536)
chr4 (21-252)||(11432330-11432557)
chr4 (15-252)||(4435116-4435349)
chr4 (15-252)||(32519727-32519961)
chr4 (15-252)||(41819147-41819390)
chr4 (15-168)||(7912882-7913035)
chr4 (15-252)||(22319975-22320208)
chr4 (15-128)||(23620930-23621043)
chr4 (15-162)||(55957573-55957720)
chr4 (15-180)||(26660121-26660286)
chr4 (15-179)||(32526380-32526544)
chr4 (35-249)||(56092184-56092393)
chr4 (16-159)||(52973694-52973836)
chr4 (15-168)||(37244007-37244160)
chr4 (18-179)||(50153707-50153868)
chr4 (15-107)||(12154284-12154376)
chr4 (19-180)||(30920299-30920460)
chr4 (22-180)||(43024641-43024799)
chr4 (18-163)||(10183661-10183809)
chr4 (18-180)||(6828981-6829142)
chr4 (15-100)||(36105755-36105840)
chr4 (15-135)||(52264319-52264440)
chr4 (15-167)||(8956577-8956728)
chr4 (15-180)||(37665919-37666086)
chr4 (18-164)||(27292375-27292526)
chr4 (15-179)||(29145508-29145674)
chr4 (20-136)||(24014510-24014626)
chr4 (196-252)||(34514287-34514343)
chr4 (284-333)||(11432249-11432298)
chr4 (82-179)||(39722002-39722099)
chr4 (15-76)||(50528844-50528905)
chr4 (192-252)||(12154164-12154224)
chr4 (76-168)||(42894708-42894791)
chr4 (214-259)||(7913053-7913098)
chr4 (38-168)||(33051898-33052029)
chr4 (123-180)||(50528769-50528826)
chr4 (220-252)||(12080612-12080644)
chr4 (141-177)||(25592350-25592386)
chr4 (193-252)||(37243925-37243984)
[»] chr2 (24 HSPs)
chr2 (15-249)||(16054966-16055199)
chr2 (15-252)||(9730137-9730369)
chr2 (18-252)||(43898074-43898307)
chr2 (15-252)||(10057225-10057461)
chr2 (15-168)||(16735053-16735206)
chr2 (19-252)||(5442948-5443175)
chr2 (15-252)||(5880235-5880471)
chr2 (15-252)||(9716154-9716388)
chr2 (15-168)||(1845238-1845391)
chr2 (15-249)||(4816577-4816808)
chr2 (15-168)||(32700612-32700765)
chr2 (18-168)||(38556443-38556593)
chr2 (15-180)||(5712491-5712656)
chr2 (15-94)||(39848539-39848618)
chr2 (18-252)||(13559956-13560185)
chr2 (15-168)||(7598936-7599089)
chr2 (15-168)||(12677749-12677902)
chr2 (15-152)||(36758125-36758262)
chr2 (16-179)||(37259256-37259412)
chr2 (15-73)||(16202142-16202200)
chr2 (129-180)||(16202049-16202100)
chr2 (90-168)||(27023424-27023502)
chr2 (200-252)||(16735232-16735285)
chr2 (139-179)||(26714075-26714115)
[»] chr3 (24 HSPs)
chr3 (17-252)||(22990508-22990743)
chr3 (15-240)||(29563536-29563750)
chr3 (15-179)||(29697483-29697647)
chr3 (15-168)||(21523770-21523924)
chr3 (15-252)||(9503823-9504057)
chr3 (19-182)||(43464450-43464612)
chr3 (25-252)||(20601600-20601827)
chr3 (19-247)||(27048570-27048794)
chr3 (15-167)||(45613155-45613307)
chr3 (15-168)||(51880215-51880368)
chr3 (18-180)||(11836854-11837016)
chr3 (15-180)||(36159170-36159336)
chr3 (15-180)||(44890658-44890823)
chr3 (17-180)||(33458569-33458732)
chr3 (15-117)||(31132978-31133080)
chr3 (39-136)||(29719350-29719449)
chr3 (21-152)||(43946648-43946781)
chr3 (15-76)||(27483386-27483447)
chr3 (204-252)||(45613099-45613147)
chr3 (16-118)||(43242041-43242142)
chr3 (130-180)||(52426413-52426463)
chr3 (201-249)||(43464389-43464437)
chr3 (104-180)||(44045685-44045761)
chr3 (142-174)||(46351465-46351497)
[»] chr7 (33 HSPs)
chr7 (15-252)||(9479286-9479518)
chr7 (18-252)||(42672763-42672993)
chr7 (15-252)||(25685293-25685526)
chr7 (15-252)||(39727237-39727470)
chr7 (15-242)||(9271148-9271371)
chr7 (15-168)||(32555703-32555856)
chr7 (15-252)||(18330670-18330903)
chr7 (18-252)||(32420356-32420586)
chr7 (15-252)||(41015688-41015922)
chr7 (16-252)||(28031864-28032096)
chr7 (15-252)||(40727024-40727257)
chr7 (15-133)||(5034092-5034210)
chr7 (15-168)||(21144466-21144619)
chr7 (15-252)||(41937647-41937881)
chr7 (24-177)||(34653861-34654015)
chr7 (15-168)||(42766552-42766704)
chr7 (82-180)||(18793709-18793807)
chr7 (49-249)||(18879544-18879741)
chr7 (17-180)||(37155528-37155690)
chr7 (70-252)||(38175744-38175922)
chr7 (15-180)||(25072685-25072851)
chr7 (18-168)||(22165974-22166129)
chr7 (18-168)||(22224681-22224836)
chr7 (39-179)||(44736595-44736735)
chr7 (25-179)||(38566627-38566782)
chr7 (22-180)||(32684236-32684396)
chr7 (24-168)||(42808948-42809091)
chr7 (64-252)||(28248880-28249065)
chr7 (284-333)||(29707013-29707062)
chr7 (205-252)||(32555646-32555693)
chr7 (201-238)||(40303336-40303373)
chr7 (142-182)||(30225782-30225822)
chr7 (129-181)||(37034432-37034484)
[»] chr5 (46 HSPs)
chr5 (24-252)||(19297953-19298177)
chr5 (18-168)||(42108520-42108670)
chr5 (15-252)||(6391335-6391567)
chr5 (15-252)||(11422506-11422741)
chr5 (18-252)||(40201718-40201950)
chr5 (15-179)||(41386889-41387053)
chr5 (18-180)||(36439917-36440079)
chr5 (17-252)||(32906822-32907052)
chr5 (15-179)||(38876623-38876788)
chr5 (15-168)||(12580082-12580235)
chr5 (13-168)||(35319295-35319450)
chr5 (15-252)||(40514765-40515001)
chr5 (15-242)||(40417239-40417467)
chr5 (15-252)||(16885449-16885683)
chr5 (15-168)||(15530086-15530239)
chr5 (15-168)||(28207286-28207439)
chr5 (15-252)||(14830594-14830828)
chr5 (15-165)||(16844483-16844633)
chr5 (15-179)||(39981618-39981783)
chr5 (15-180)||(8570185-8570352)
chr5 (15-168)||(28022739-28022892)
chr5 (15-180)||(22859615-22859780)
chr5 (23-168)||(333700-333845)
chr5 (15-118)||(17742919-17743022)
chr5 (15-168)||(8689105-8689257)
chr5 (15-104)||(39963935-39964022)
chr5 (15-100)||(2823530-2823615)
chr5 (15-155)||(15577829-15577970)
chr5 (39-179)||(25606228-25606369)
chr5 (82-178)||(29571153-29571248)
chr5 (82-160)||(10623605-10623683)
chr5 (15-168)||(10918314-10918467)
chr5 (98-180)||(18988613-18988695)
chr5 (192-252)||(11873629-11873688)
chr5 (41-180)||(18731070-18731207)
chr5 (48-96)||(29571095-29571143)
chr5 (16-76)||(35412360-35412420)
chr5 (192-249)||(41873097-41873155)
chr5 (192-252)||(333887-333948)
chr5 (192-252)||(12579977-12580038)
chr5 (196-252)||(8570112-8570168)
chr5 (192-252)||(39964087-39964147)
chr5 (21-76)||(22658377-22658432)
chr5 (15-109)||(4385974-4386068)
chr5 (192-238)||(11789717-11789763)
chr5 (220-252)||(36440123-36440155)
[»] chr6 (21 HSPs)
chr6 (15-252)||(10667562-10667796)
chr6 (15-180)||(24556571-24556737)
chr6 (18-259)||(6248686-6248923)
chr6 (15-168)||(9952718-9952871)
chr6 (24-168)||(26244259-26244403)
chr6 (33-252)||(33248077-33248292)
chr6 (15-233)||(13640801-13641014)
chr6 (15-168)||(24073523-24073675)
chr6 (18-180)||(33614532-33614694)
chr6 (15-252)||(5331092-5331325)
chr6 (63-234)||(6228044-6228211)
chr6 (15-180)||(2803834-2804000)
chr6 (30-180)||(10265733-10265883)
chr6 (82-164)||(33011716-33011798)
chr6 (203-252)||(17225391-17225440)
chr6 (18-56)||(6228374-6228412)
chr6 (15-61)||(33011615-33011661)
chr6 (15-71)||(5167211-5167267)
chr6 (201-249)||(26244145-26244193)
chr6 (132-182)||(17225173-17225223)
chr6 (284-333)||(33248324-33248373)
[»] scaffold0330 (1 HSPs)
scaffold0330 (15-252)||(10845-11079)
[»] scaffold0036 (1 HSPs)
scaffold0036 (15-180)||(52979-53144)
[»] scaffold0003 (1 HSPs)
scaffold0003 (16-179)||(324879-325042)
[»] scaffold0373 (1 HSPs)
scaffold0373 (18-180)||(7278-7439)


Alignment Details
Target: chr1 (Bit Score: 201; Significance: 1e-109; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 15 - 255
Target Start/End: Complemental strand, 47295828 - 47295588
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||    
T  47295828 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcatttatattaaactctcttttgataatcaacatgagttt 47295729  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttga 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||    
T  47295728 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagaaaaaaaattaatgtatactaataagcttga 47295629  T
Q  215 attattgaaaaagttaacaaatttttatgttaattcaaggt 255  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  47295628 attattgaaaaagttaacaaatttttattttaattcaaggt 47295588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 15 - 252
Target Start/End: Original strand, 51370211 - 51370447
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||| ||||| ||||||||| ||| |||||||||||||||||||||||||||| ||||    
T  51370211 atgaacatatttaaataagcaatgtgatctaagtttaactagactaacgaacaaatatatcaattagattaaactctcttttgataatcaacatgaattt 51370310  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaa---ttctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagct 211  Q
    ||||||||||| ||||||||||  ||||||||||||   ||||||||||||||||||  || ||||||| |         ||||||||||||||||||||    
T  51370311 ttaagaaatttaactatatattgtatcatatttcaatttttctagtttataataatacattcaaatatgca----aaaaattaatgtatactaataagct 51370406  T
Q  212 tgaattattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    | ||||| |||||||||||| |||||| ||| |||||||||    
T  51370407 taaattactgaaaaagttaagaaatttctattttaattcaa 51370447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 15 - 252
Target Start/End: Complemental strand, 16010725 - 16010492
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||||||||||| | ||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||    
T  16010725 atgaacatctttaaatcatcaatgtgatttaagtgtaaatagactagcgaactaatatatcaattatattaaactctcttttgataatcaacatgagttt 16010626  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttga 214  Q
    ||| ||||||||||||||||||  |||||||||||||| |||||||||||||||  | |||||||| |         ||||| ||||||||||||||| |    
T  16010625 ttaggaaatttgactatatattgtatcatatttcaattatagtttataataatacatataaatatgca----aaaaattaatttatactaataagcttaa 16010530  T
Q  215 attattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    |||| ||||||| |||||  |||||||| |||||||||    
T  16010529 attactgaaaaaattaacgcatttttattttaattcaa 16010492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 15 - 252
Target Start/End: Original strand, 4362197 - 4362430
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||| | |||||||||| | ||| ||||||||||| |||||||||||| |||  |||    
T  4362197 atgaacatttttaaataagcaatgtgatttaagtttaaatagactagtggactaatatataaattagattaaactctcctttgataatcaagatgagttt 4362296  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttga 214  Q
    ||| | |||||||||||||| |  |||||||||||||| |||||||||||||||  |||||||||| |         |||||||||||| |||||||| |    
T  4362297 ttagggaatttgactatataatgtatcatatttcaattttagtttataataatacatttaaatatgca----aaacattaatgtatactgataagcttaa 4362392  T
Q  215 attattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    |||| | ||||||||||||||||||||| |||||||||    
T  4362393 attacttaaaaagttaacaaatttttattttaattcaa 4362430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 15 - 180
Target Start/End: Original strand, 30562269 - 30562434
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||| |||  |||    
T  30562269 atgaacatctttaaataatcaatgtgatctaagtttaaatagactagcaaactaatatatcaattatattaaactatcttttgataatcaagatgagttt 30562368  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatg 180  Q
    ||| | ||||||| ||||||||  ||||||||||||||||| ||||||||||||  ||||||||||    
T  30562369 ttagggaatttgattatatattgtatcatatttcaattctaatttataataatacatttaaatatg 30562434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 15 - 178
Target Start/End: Complemental strand, 8424551 - 8424388
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||||||||||||| |||||||||| || ||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||  |||    
T  8424551 atgaacatctttaaataaacaatgtgatcaaaatttaaatagactaacgaactaatatatcagttagattaaactcacttttgataatcaacatgagttt 8424452  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaata 178  Q
    ||||  ||||||||||||||||  |||||||||||||| |||||||||||||||  ||||||||    
T  8424451 ttaaagaatttgactatatattgtatcatatttcaattttagtttataataatacatttaaata 8424388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 15 - 249
Target Start/End: Original strand, 45339073 - 45339305
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttg--ataatcaacatggat 112  Q
    |||||||||||| ||||||||||  ||||||||||||||||||||||| ||||||||||||| ||| |||| |||||||||||  ||||| || || ||     
T  45339073 atgaacatcttttaataagcaatacgatctaagtttaaatagactagcaaactaatatatcaattagattatactctcttttgatataataaagat-gag 45339171  T
Q  113 ttttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagctt 212  Q
    |||| ||| | || ||||||||||  |||||||||||||| |||||||||||||||| |||||||||| |         |||||||||||||||||||||    
T  45339172 tttttagagaatttactatatattgtatcatatttcaattatagtttataataatatatttaaatatgca---aaaaaattaatgtatactaataagctt 45339268  T
Q  213 gaattattgaaaaagttaacaaatttttatgttaatt 249  Q
     ||||| ||||||||||||||||||||||| ||||||    
T  45339269 aaattactgaaaaagttaacaaatttttattttaatt 45339305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 15 - 252
Target Start/End: Complemental strand, 11751736 - 11751504
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    ||||||||||||| |||| ||||||||||||||||||||||||| ||| |||||||| |||| ||| ||||||||||||||||||||||||||||   ||    
T  11751736 atgaacatctttacataaacaatgtgatctaagtttaaatagaccagcaaactaatagatcaattagattaaactctcttttgataatcaacatgaggtt 11751637  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttga 214  Q
    |||   ||||||||||||||||  ||||||||| | ||||||||||||||||||   ||| |||||||          |||| |||||||||||| || |    
T  11751636 ttagagaatttgactatatattgtatcatattttatttctagtttataataataaaattatatatgaa-----aaaactaatatatactaataagtttaa 11751542  T
Q  215 attattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    |||||||||||||||||||||||| ||| |||| ||||    
T  11751541 attattgaaaaagttaacaaatttatattttaactcaa 11751504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 15 - 180
Target Start/End: Original strand, 45377801 - 45377966
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    ||||| |||||||||| | ||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||  |||    
T  45377801 atgaatatctttaaatcaacaatgtgatctaagtgtaaatagactagcgaactaatatatcaattagattaaactctcttttgataatcaacatgagttt 45377900  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatg 180  Q
    ||| | ||||| |||||||| |  ||||||| ||||||||||||| ||||||||  ||||||||||    
T  45377901 ttagggaatttaactatatactgtatcatatatcaattctagtttgtaataatacatttaaatatg 45377966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 15 - 252
Target Start/End: Original strand, 2759012 - 2759245
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||| ||||||||| ||||||||||||||||||||| || |||||||||||||||||| ||| ||||||||||||||||||||| | ||||  |||    
T  2759012 atgaacatatttaaataaacaatgtgatctaagtttaaattgattagcgaactaatatatcaattagattaaactctcttttgataattaccatgagttt 2759111  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttga 214  Q
    ||| | ||||||||  ||||||  |||||||  |||||||||||| |||||||| ||||||||||| |         ||||||| || |||||||||| |    
T  2759112 ttagggaatttgac--tatattgtatcatataacaattctagtttgtaataatacgtttaaatatgca--aaaaaaattaatgtttattaataagcttaa 2759207  T
Q  215 attattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    |||| ||||||||||| || |||||||| |||||||||    
T  2759208 attactgaaaaagttatcatatttttattttaattcaa 2759245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 284 - 380
Target Start/End: Complemental strand, 47295559 - 47295463
Alignment:
Q  284 ttattcatatttacttcaatatgccgacctaatatgcctaggaggcttttataataattcgttttttcaatggttggttcttgtatgagtctcttat 380  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  47295559 ttattcatatttacttcaatatgccgacctaatatgcctaagaggcttttataataattcgttttttcaatggtcggttcttgtatgagtctcttat 47295463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 15 - 231
Target Start/End: Original strand, 27089692 - 27089907
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    ||||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||  |||    
T  27089692 atgaatatcttttaataaacaatgtgatctaagtttagatagactagcgaactaatatatcaattagattaaactctcttttgataatcaagatgagttt 27089791  T
Q  115 tta--aga-aatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagct 211  Q
    ||   ||| ||||||| ||||||||  |||||||||||||| |||||||||||||||  |||||||||| |           ||||||||||||||||||    
T  27089792 tttttagagaatttgattatatattgtatcatatttcaattttagtttataataatacatttaaatatgtaaaaaagc----aatgtatactaataagct 27089887  T
Q  212 tgaattattgaaaaagttaa 231  Q
    | ||||| ||||||||||||    
T  27089888 taaattactgaaaaagttaa 27089907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 21 - 252
Target Start/End: Complemental strand, 1825291 - 1825063
Alignment:
Q  21 atctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggatttttaaga 120  Q
    |||||| |||||||||||| ||| || |||||||||| |||||||||||| ||||  ||| |||||| ||| ||||||||||||||||| ||||||| ||    
T  1825291 atcttttaataagcaatgtaatc-aactttaaatagattagcgaactaatttatctattagattaaaatctattttgataatcaacatgaatttttagga 1825193  T
Q  121 aatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttgaattatt 220  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||  |||||||||  |         ||||||||||||||||| ||| ||||| |    
T  1825192 aatttgactatatatcgtatcatatttcaattctagtttataataatacatttaaatat--atgtaaaaaattaatgtatactaataaccttaaattact 1825095  T
Q  221 gaaaaagttaacaaatttttatgttaattcaa 252  Q
     |||| | ||||||| |||||| |||||||||    
T  1825094 aaaaagggtaacaaaattttattttaattcaa 1825063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 30 - 252
Target Start/End: Original strand, 39737311 - 39737528
Alignment:
Q  30 taagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggatttttaagaaatttgact 129  Q
    |||||||||| |||||||||||||||||||| | ||| ||||||||| ||| |||||||||||||||||||||||| |||  ||||||   ||||||| |    
T  39737311 taagcaatgtaatctaagtttaaatagactaacaaacaaatatatcaattagattaaactctcttttgataatcaagatgactttttagataatttgatt 39737410  T
Q  130 atatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttgaattattgaaaaagtt 229  Q
    |||||||  || ||||||||||| |||| ||||||||||   ||||||||| |         |||| |||||||||||||||| ||||| ||||||||||    
T  39737411 atatattatataatatttcaattatagtatataataata-cattaaatatgga----aaaaattaacgtatactaataagcttaaattactgaaaaagtt 39737505  T
Q  230 aacaaatttttatgttaattcaa 252  Q
    ||||||||||||| |||||||||    
T  39737506 aacaaatttttattttaattcaa 39737528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 15 - 168
Target Start/End: Complemental strand, 7287330 - 7287177
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||||||||||||||||||||||||||||||||||| |||||  |||||||||  ||| ||| |||||||||||||||||||||||||| |   ||    
T  7287330 atgaacatctttaaataagcaatgtgatctaagtttaaatggactaatgaactaatagttcaattaaattaaactctcttttgataatcaacacgaggtt 7287231  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataata 168  Q
    |||  ||||| |||| ||||||  |||||||||| |||||||||||||||||||    
T  7287230 ttagaaaattcgactgtatattgtatcatatttctattctagtttataataata 7287177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 89 - 252
Target Start/End: Original strand, 6136029 - 6136187
Alignment:
Q  89 tctcttttgataatcaacatggatttttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnn 188  Q
    |||| ||||||||||||||||  |||||| ||||||||||||||||||  ||||||||||||||||||||||||||||| | |||||| ||| |          
T  6136029 tctcatttgataatcaacatgagtttttaggaaatttgactatatattgtatcatatttcaattctagtttataataatgtatttaaacatgca----aa 6136124  T
Q  189 nnnttaatgtatactaataagcttgaattattgaaaaagttaacaaatttttatgttaattcaa 252  Q
       ||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||    
T  6136125 aaattaatgtatactaataagcttaaattattg-aaaagttaacaaatttttattttaattcaa 6136187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 15 - 249
Target Start/End: Complemental strand, 25412399 - 25412168
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||| | ||||||||  ||| ||| ||||||||||||||  || ||||||| |   ||    
T  25412399 atgaacatctttaaataagtaatgtgatctaaatttaaatggactaacaaactaatagttcaattaaattaaactctctttacatgatcaacacgaggtt 25412300  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaat-aagcttg 213  Q
    ||| | |||| |||||||||||  |||||||||| |||||||||||||||||||  |||| ||||| |         ||||||||||||||| ||||||     
T  25412299 ttagggaattcgactatatattgtatcatatttctattctagtttataataatacatttatatatgca----aaaaattaatgtatactaataaagctta 25412204  T
Q  214 aattattgaaaaagttaacaaatttttatgttaatt 249  Q
    |||||||||||||||| |||||||| ||| ||||||    
T  25412203 aattattgaaaaagtttacaaatttatattttaatt 25412168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 15 - 252
Target Start/End: Complemental strand, 41158132 - 41157898
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    ||||||||||| || ||| ||||| ||||||||||||||| |||||| ||||| |||  ||| ||| ||||||||||| |||||||||||||| |   ||    
T  41158132 atgaacatcttcaagtaaccaatgagatctaagtttaaatggactagagaacttatagttcaattagattaaactctcatttgataatcaacacgaggtt 41158033  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaat-aagcttg 213  Q
    ||| | || | |||||||||||  ||||||| || |||||||||||||||||||  |||| ||||| |         ||||||||||||||| ||||||     
T  41158032 ttagggaactcgactatatattgtatcatatgtctattctagtttataataataaatttatatatgta----aaaaattaatgtatactaataaagctta 41157937  T
Q  214 aattattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    |||||||||||||||| |||||||| ||| |||||||||    
T  41157936 aattattgaaaaagtttacaaatttatattttaattcaa 41157898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 168
Target Start/End: Complemental strand, 642800 - 642647
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||  ||| ||| ||||||||||||||| ||||||||||     ||    
T  642800 atgaacatctctaaataagcaatgtgatctaagtttaaatggactagtgaactaatagttcaattaaattaaactctcttttcataatcaacacaaggtt 642701  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataata 168  Q
    |||   |||| |||||||||||  |||||||||| |||||| ||||||||||||    
T  642700 ttagcgaattcgactatatattgcatcatatttctattctaatttataataata 642647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 18 - 157
Target Start/End: Complemental strand, 10158098 - 10157958
Alignment:
Q  18 aacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattttta 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||  ||| ||| |||||||||| |||||||||||||||||   |||||    
T  10158098 aacatctttaaataagcaatgtgatctaagtttaaatagactagtaaactaatagttcaattaaattaaactctattttgataatcaacatgatgtttta 10157999  T
Q  118 agaaa-tttgactatatatttgatcatatttcaattctagt 157  Q
     |||| ||| || |||||||  |||||||||||||| ||||    
T  10157998 ggaaattttaacaatatattgtatcatatttcaattttagt 10157958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 15 - 163
Target Start/End: Complemental strand, 4441283 - 4441135
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaaca-tggatt 113  Q
    ||||||||||||||||| | |||||||||||||||||||| |||||| |||||||||  ||| ||| |||||||||||||||||||||||||| | || |    
T  4441283 atgaacatctttaaatatgaaatgtgatctaagtttaaatggactagtgaactaataattcaattagattaaactctcttttgataatcaacactaga-t 4441185  T
Q  114 tttaagaaatttgactatatatttgatcatatttcaattctagtttataa 163  Q
    |||| | |||| || ||||||||  |||||||||| ||| ||||||||||    
T  4441184 tttagggaattcgaatatatattatatcatatttctattatagtttataa 4441135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 15 - 242
Target Start/End: Original strand, 46998083 - 46998303
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacat--ggat 112  Q
    |||||||||||| ||||||||||||||||||||||||||||||| | | || |||||||| | ||| |||||||||||||||  |||| || ||  |  |    
T  46998083 atgaacatcttttaataagcaatgtgatctaagtttaaatagaccaacaaattaatatattaattagattaaactctcttttactaataaatatgagttt 46998182  T
Q  113 ttttaaga-aatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagct 211  Q
    |||| ||| ||||| ||||||||||  ||||||||||||||||||      ||||||  |||||||||| |          |||||||||||||||||||    
T  46998183 tttttagagaattttactatatattgtatcatatttcaattctag------ataatacatttaaatatgca----aaataataatgtatactaataagct 46998272  T
Q  212 tgaattattgaaaaagttaacaaatttttat 242  Q
    | |||||||||||||||||||||||||||||    
T  46998273 taaattattgaaaaagttaacaaatttttat 46998303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 113 - 252
Target Start/End: Original strand, 3022697 - 3022833
Alignment:
Q  113 ttttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagctt 212  Q
    ||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||  |||||||||| |         ||||||||||| |||||||||    
T  3022697 ttttaaggaatttgactatatattgtatcatatttcaattctagtttataataatacatttaaatatgca---aaaaaattaatgtatacaaataagctt 3022793  T
Q  213 gaattattgaaaaagttaacaaatttttatgttaattcaa 252  Q
     |||||||| ||| |||||||||||||||| |||||||||    
T  3022794 aaattattgtaaaggttaacaaatttttattttaattcaa 3022833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 34 - 180
Target Start/End: Original strand, 20953031 - 20953177
Alignment:
Q  34 caatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatg-gatttttaagaaatttgactata 132  Q
    ||||||| |||||||||||||||| ||||  |||||||||||| ||| ||| |||||||||||||||||| ||||| ||||||  || |||||| |||||    
T  20953031 caatgtggtctaagtttaaatagattagcagactaatatatcaattagattgaactctcttttgataatcgacatgagattttagag-aatttggctata 20953129  T
Q  133 tatttgatcatatttcaattctagtttataataatatgtttaaatatg 180  Q
    |||   |||||||||||||| |||||||||||||||  ||||||||||    
T  20953130 tatcgtatcatatttcaattatagtttataataatacatttaaatatg 20953177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 15 - 252
Target Start/End: Complemental strand, 45756309 - 45756076
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||| |||||||| |||||||||||||||||||||| ||||| |||| |||||  ||  ||| |||||||||||||||||||||||||| |   ||    
T  45756309 atgaacatatttaaatatgcaatgtgatctaagtttaaatggactaacgaattaatagttctattagattaaactctcttttgataatcaacacgagatt 45756210  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaat-aagcttg 213  Q
    ||| | || |  |||||||| |  |||||||||||||| ||||||||||||| |  |||| | ||| |         ||||||||||||||| ||||||     
T  45756209 ttagggaaatcaactatatactgtatcatatttcaattatagtttataataa-acatttatagatgca----aaaaattaatgtatactaataaagctta 45756115  T
Q  214 aattattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    |||||||||||||||| |||||||| ||| |||||||||    
T  45756114 aattattgaaaaagtttacaaatttatattttaattcaa 45756076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 3839441 - 3839321
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    ||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||  ||| ||| ||||||||| |||||||||||||||  |   ||    
T  3839441 atgaacatctttaaataagcaatgtgatctaagtttaaacaaactaacgaactaatagttcaattagattaaactcacttttgataatcaacgcgaggtt 3839342  T
Q  115 ttaagaaatttgactatatat 135  Q
    ||| |||||| ||||||||||    
T  3839341 ttaggaaattcgactatatat 3839321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 15 - 180
Target Start/End: Original strand, 22863248 - 22863411
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    ||||||||||||||||||| ||||  ||  ||| |||||||||  |||||||||||| |||| | |||||||||||||||| |||| | ||| || | ||    
T  22863248 atgaacatctttaaataagtaatg--atacaaggttaaatagatcagcgaactaatagatcaatgatattaaactctctttcgatatttaacctgaagtt 22863345  T
Q  115 tta-agaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatg 180  Q
    ||| |||| |||| |||||||||  ||||||||||||||||| ||||||||||||  ||||||||||    
T  22863346 ttagagaactttg-ctatatattatatcatatttcaattctaatttataataatacatttaaatatg 22863411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 4402308 - 4402143
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||| |||||| ||| |||||||  |||| ||||||| |||| | |||||||| |||| |   ||| || |||||||||||| | |||||||||||    
T  4402308 atgaacatttttaaacaagtaatgtgaaataaggttaaataaactaacaaactaataaatcaatgtgattgaattctcttttgatatttaacatggattt 4402209  T
Q  115 tta-agaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatg 180  Q
    ||| |||| ||| ||||||||||  ||||||||||||||||| ||||||||||||  ||||||||||    
T  4402208 ttagagaacttt-actatatattatatcatatttcaattctaatttataataatacatttaaatatg 4402143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 17391766 - 17391600
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatg-gatt 113  Q
    ||||||||||||||||||| |||||||| | | ||||||| ||||| ||||||||||||| | | | ||||||||| ||||||||| ||||||||  |||    
T  17391766 atgaacatctttaaataagtaatgtgatattaatttaaatggactaacgaactaatatatgaataaaattaaactcacttttgatattcaacatgaaatt 17391667  T
Q  114 tttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatg 180  Q
    ||||  |||  | ||||||||||  ||||||||  | ||||||||||||||| ||  ||||||||||    
T  17391666 tttagaaaacgtaactatatattatatcatattatagttctagtttataatagtacatttaaatatg 17391600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 35 - 168
Target Start/End: Original strand, 11862573 - 11862706
Alignment:
Q  35 aatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggatttttaagaaatttgactatata 134  Q
    |||||||| ||| ||||||||||||| | ||||||||||||| ||||||||| ||| ||||| ||| | |||||| |||| ||  |||||||||||||||    
T  11862573 aatgtgatataaatttaaatagactaacaaactaatatatcaattatattaatctcccttttcatatttaacatgaatttctacaaaatttgactatata 11862672  T
Q  135 tttgatcatatttcaattctagtttataataata 168  Q
    ||     |||||||||||||||||||| ||||||    
T  11862673 ttaagaaatatttcaattctagtttatgataata 11862706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 21 - 180
Target Start/End: Complemental strand, 45621721 - 45621560
Alignment:
Q  21 atctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattttta-ag 119  Q
    ||||||||| ||| | |||||| | ||||||||||||||||||||| |||| || | |   ||||||||| ||||||||| | ||||||  |||||  ||    
T  45621721 atctttaaacaagtagtgtgatatgagtttaaatagactagcgaacgaatagattaatgtgattaaactcccttttgatagttaacatgattttttttag 45621622  T
Q  120 a-aatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatg 180  Q
    | ||||| ||||||||||||||| |||||||||| |||||| ||||||||  ||||||||||    
T  45621621 ataattttactatatatttgatcgtatttcaattatagtttgtaataatacatttaaatatg 45621560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 14346384 - 14346248
Alignment:
Q  18 aacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattttta 117  Q
    |||||||||||||||| |||||||| |||  |||||||||||||| |||||||| |||| || | |||||||||| ||| ||| | |||||| | |||||    
T  14346384 aacatctttaaataagtaatgtgatttaaagttaaatagactagcaaactaatagatcatttgtgttaaactctcctttaatatttaacatgaaatttta 14346285  T
Q  118 -agaaatttgactatatatttgatcatatttcaattct 154  Q
     |||| ||| ||||||||||  ||||||||| ||||||    
T  14346284 gagaacttt-actatatattatatcatatttgaattct 14346248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 29639665 - 29639605
Alignment:
Q  192 ttaatgtatactaataagcttgaattattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||| | |||||||||    
T  29639665 ttaatgtatactaataagcttagattattgaaaaagttaacaaatttttcttttaattcaa 29639605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 38 - 168
Target Start/End: Complemental strand, 18379325 - 18379196
Alignment:
Q  38 gtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggatttttaagaaatttgactatatattt 137  Q
    ||||||||| ||| ||||||||| |||| ||||| |||| | ||||||||||| ||||||||| | |||||  |||| ||   || |||||||||||||     
T  18379325 gtgatctaattttgaatagactatcgaattaatagatcattgatattaaactcccttttgatatttaacattaatttgtagataaattgactatatatta 18379226  T
Q  138 gatcatatttcaattctagtttataataata 168  Q
     |||||||||||||| |||||| ||||||||    
T  18379225 tatcatatttcaattatagttt-taataata 18379196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 29639731 - 29639674
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatat 72  Q
    ||||| |||||||||||| ||||||||| |||||||||||||||||||||| ||||||    
T  29639731 atgaatatctttaaataaacaatgtgatataagtttaaatagactagcgaattaatat 29639674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 192 - 253
Target Start/End: Original strand, 29987608 - 29987669
Alignment:
Q  192 ttaatgtatactaataagcttgaattattgaaaaagttaacaaatttttatgttaattcaag 253  Q
    |||||||||| |||| ||||| ||||| ||||||||||||||||||||||| ||||||||||    
T  29987608 ttaatgtataataattagcttaaattactgaaaaagttaacaaatttttattttaattcaag 29987669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 23757367 - 23757311
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaata 71  Q
    ||||||||||||||||||  |||||| |||||||||||||| |||||||||||||||    
T  23757367 atgaacatctttaaataatgaatgtggtctaagtttaaataaactagcgaactaata 23757311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 37696218 - 37696158
Alignment:
Q  192 ttaatgtatactaataagcttgaattattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    ||||||||||||||||||||| ||| | ||||||||||||||||||| |||| ||||||||    
T  37696218 ttaatgtatactaataagcttcaataactgaaaaagttaacaaatttatatggtaattcaa 37696158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 15 - 177
Target Start/End: Complemental strand, 23981516 - 23981354
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||| ||| |||||||||| |||||||| ||| ||||||||||||||  |||||||| || | | | ||||||||| | ||||||| | || ||| ||||    
T  23981516 atgatcatgtttaaataagtaatgtgatataaatttaaatagactagacaactaataaataaatgagattaaactcccatttgatatttaaaatgaattt 23981417  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaat 177  Q
    |||   | | | ||||||||||  |||||||||||||| || |||| |||||||  |||||||    
T  23981416 ttagagagtataactatatattatatcatatttcaattataatttaaaataatacatttaaat 23981354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 642594 - 642533
Alignment:
Q  192 ttaatgtatactaataa-gcttgaattattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    ||||||||||||||||| |||| |||||||||||||||| |||||||| ||| |||||||||    
T  642594 ttaatgtatactaataaagcttaaattattgaaaaagtttacaaatttatattttaattcaa 642533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 3022658 - 3022697
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaat 54  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  3022658 atgaacatctttaaataagcaatgtgatcgaagtttaaat 3022697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 168
Target Start/End: Original strand, 35718442 - 35718575
Alignment:
Q  38 gtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactc-tcttttgataatcaacatggatttttaagaaatttgactatatat- 135  Q
    ||||||||||||| ||| |||||  |||||||||||||| | | ||||||||| | |||| ||| | |||| | |||||||   ||||||| |||||||     
T  35718442 gtgatctaagtttcaatcgactaatgaactaatatatcattgaaattaaactcgtttttttatatttaacaagaatttttagagaatttgattatatatt 35718541  T
Q  136 -ttgatcatatttcaattctagtttataataata 168  Q
     |  ||||||||||||||||||||||| ||||||    
T  35718542 atatatcatatttcaattctagtttatcataata 35718575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 3839254 - 3839193
Alignment:
Q  192 ttaatgtatactaataag-cttgaattattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    |||||||||||||||||  ||| |||||||||||||||| |||||||| ||| |||||||||    
T  3839254 ttaatgtatactaataaaacttaaattattgaaaaagtttacaaatttatattttaattcaa 3839193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 60 - 165
Target Start/End: Complemental strand, 37696698 - 37696593
Alignment:
Q  60 agcgaactaatatatcagttatattaaactctcttttgataatcaacatggatttttaagaaatttgactatatatttgatcatatttcaattctagttt 159  Q
    ||||| |||||| |||| ||| |||||| ||| |||| ||||||||||||   |||||   ||||||| ||||||||  ||||||||| |||||||||||    
T  37696698 agcgagctaatagatcaattagattaaagtcttttttaataatcaacatgaggttttagagaatttgattatatattgtatcatattttaattctagttt 37696599  T
Q  160 ataata 165  Q
    | ||||    
T  37696598 aaaata 37696593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 179
Target Start/End: Original strand, 47646287 - 47646326
Alignment:
Q  140 tcatatttcaattctagtttataataatatgtttaaatat 179  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  47646287 tcatatttcaattctcgtttataataatatatttaaatat 47646326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 120 - 178
Target Start/End: Original strand, 41463373 - 41463431
Alignment:
Q  120 aaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaata 178  Q
    ||||||||||||||||   | ||||||| ||||||||||||||||||||  ||||||||    
T  41463373 aaatttgactatatatgataccatattttaattctagtttataataataaatttaaata 41463431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 47 - 168
Target Start/End: Original strand, 42323441 - 42323562
Alignment:
Q  47 gtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggatttttaaga-aatttgactatatatttgatcatat 145  Q
    ||||||||||||||||  ||||||| |||| | | |||||| |||||||||||| | ||||| ||||||  ||| ||||  |||||||||   ||| |||    
T  42323441 gtttaaatagactagcatactaatagatcaatgagattaaattctcttttgatatttaacat-gattttatagagaattcaactatatatgatatcgtat 42323539  T
Q  146 ttcaattctagtttataataata 168  Q
    |||| ||||| ||||||||||||    
T  42323540 ttcagttctaatttataataata 42323562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 44078496 - 44078450
Alignment:
Q  192 ttaatgtatactaataagcttgaattattgaaaaagttaacaaattt 238  Q
    |||||||| ||| |||||||| ||||| |||||||||||||||||||    
T  44078496 ttaatgtagacttataagcttaaattactgaaaaagttaacaaattt 44078450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 168
Target Start/End: Original strand, 65142 - 65275
Alignment:
Q  35 aatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggatttttaagaaatttgactatata 134  Q
    ||||| ||||||||||||||| | || ||||  |||| |||| | | |||||||||  |||| ||| | || ||| | |||||   ||||||||||| ||    
T  65142 aatgtaatctaagtttaaatatagtaacgaatcaatagatcattaaaattaaactcattttttatatttaaaatgaagttttagagaatttgactatcta 65241  T
Q  135 tttgatcatatttcaattctagtttataataata 168  Q
    ||  || ||||| |||||||||||||||||||||    
T  65242 ttatattatattacaattctagtttataataata 65275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 4441109 - 4441048
Alignment:
Q  192 ttaatgtatactaataag-cttgaattattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    |||||||||||||||||  ||| |||||||||||||||| || ||||| ||| |||||||||    
T  4441109 ttaatgtatactaataaaacttaaattattgaaaaagtttacgaatttatattttaattcaa 4441048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 28397398 - 28397466
Alignment:
Q  21 atctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaact 89  Q
    ||||||||||||| |||||  | |||||||||||||| ||||||||| ||| |||| | | ||||||||    
T  28397398 atctttaaataagtaatgtagtataagtttaaatagattagcgaacttatagatcaataagattaaact 28397466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 138; Significance: 5e-72; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 15 - 252
Target Start/End: Original strand, 30469371 - 30469607
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||  |||    
T  30469371 atgaacatctttaaataagcaatgtgatctaagtttgaatagactagcaaactaatatatcaattacattaaactctcttttgataatcaacatgagttt 30469470  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttga 214  Q
    ||| ||||||||||||||||||  ||||||||||||||||||||||||||||||  ||||||||||||          |||||||||||||||||||| |    
T  30469471 ttaggaaatttgactatatattgtatcatatttcaattctagtttataataatacatttaaatatgaaagaaaaaaaataatgtatactaataagcttaa 30469570  T
Q  215 attattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    |||| | ||||| ||||||||||||||| |||||||||    
T  30469571 attacttaaaaa-ttaacaaatttttattttaattcaa 30469607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 15 - 252
Target Start/End: Original strand, 40691165 - 40691396
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||  |||||||||||||||||||| | ||    
T  40691165 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcaattagattaaa--ctcttttgataatcaacatgaactt 40691262  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttga 214  Q
    ||| | | ||||||||||||||  |||| |||||||||||||||||||||||||  | |||||||| |         |||||||| |||||||||||| |    
T  40691263 ttagggagtttgactatatattgtatcagatttcaattctagtttataataatacatataaatatgca----aaatattaatgtagactaataagcttaa 40691358  T
Q  215 attattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    |||| ||||| | |||||| |||||||| |||||||||    
T  40691359 attactgaaacaattaacatatttttattttaattcaa 40691396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 48 - 252
Target Start/End: Original strand, 2510494 - 2510694
Alignment:
Q  48 tttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggatttttaagaaatttgactatatatttgatcatattt 147  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||  |||||| ||||||||| ||||||||  |||||||||    
T  2510494 tttaaatagactagcgaactaatatatcaattagattaaactctcttttgataatcaagatgagtttttaggaaatttgattatatattgtatcatattt 2510593  T
Q  148 caattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttgaattattgaaaaagttaacaaatttttatgttaa 247  Q
    |||||||||||||||||||||  |||||||||| |         ||||||||||||||||||||| ||||| |||||||||||||| |||||||| ||||    
T  2510594 caattctagtttataataatacatttaaatatgca----aaaaattaatgtatactaataagcttaaattactgaaaaagttaacacatttttattttaa 2510689  T
Q  248 ttcaa 252  Q
    |||||    
T  2510690 ttcaa 2510694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 38996197 - 38995967
Alignment:
Q  18 aacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattttta 117  Q
    ||||| ||||||||||||||| ||| |||||||||||||||||| |||||||||||||| ||| |||||||| ||||||||||||||||||| |||||||    
T  38996197 aacatttttaaataagcaatgcgatgtaagtttaaatagactagtgaactaatatatcaattagattaaactttcttttgataatcaacatgaattttta 38996098  T
Q  118 agaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttgaatt 217  Q
       ||||| ||||||||||  | ||||||||||||||||||||||||||||  |||| ||||| |         |||||| |||||||||||||| || |    
T  38996097 gagaattttactatatattgtaccatatttcaattctagtttataataatacatttatatatgca----aaaaattaatgcatactaataagcttaaaat 38996002  T
Q  218 attgaaaaagttaacaaatttttatgttaattcaa 252  Q
    | ||||||||||||||||||||||| |||||||||    
T  38996001 actgaaaaagttaacaaatttttattttaattcaa 38995967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 44602219 - 44601989
Alignment:
Q  18 aacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattttta 117  Q
    ||||| ||||||||||||||| ||| |||||||||||||||||| |||||||||||||| ||| |||||||| ||||||||||||||||||| |||||||    
T  44602219 aacatttttaaataagcaatgcgatgtaagtttaaatagactagtgaactaatatatcaattagattaaactttcttttgataatcaacatgaattttta 44602120  T
Q  118 agaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttgaatt 217  Q
       ||||| ||||||||||  | ||||||||||||||||||||||||||||  |||| ||||| |         |||||| |||||||||||||| || |    
T  44602119 gagaattttactatatattgtaccatatttcaattctagtttataataatacatttatatatgca----aaaaattaatgcatactaataagcttaaaat 44602024  T
Q  218 attgaaaaagttaacaaatttttatgttaattcaa 252  Q
    | ||||||||||||||||||||||| |||||||||    
T  44602023 actgaaaaagttaacaaatttttattttaattcaa 44601989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 15 - 252
Target Start/End: Original strand, 22738598 - 22738833
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||| | ||| ||||||||||||||||| |||||||||   |||    
T  22738598 atgaacatctttaaataaggaatatgatctaagtttaaatagactagtgaactaatatattaattagattaaactctcttttgacaatcaacattagttt 22738697  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttga 214  Q
    ||| ||||||||||||||||||  | ||||||||||||||||||||||||||||  |||||||||| |         |||||||||||||||||| || |    
T  22738698 ttaggaaatttgactatatattataccatatttcaattctagtttataataatacatttaaatatgca--aaaaaaattaatgtatactaataagtttaa 22738795  T
Q  215 attattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    |||| | || |||||| || |||||||| |||||||||    
T  22738796 attactaaagaagttaccatatttttattttaattcaa 22738833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 15 - 168
Target Start/End: Original strand, 21019754 - 21019907
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||   ||    
T  21019754 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatagatcaattaaattaaactctcttttgataatcaacatgagatt 21019853  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataata 168  Q
    ||| | |||||||| | || ||  ||||||||||||||||||||||||||||||    
T  21019854 ttagggaatttgacaaaattttgtatcatatttcaattctagtttataataata 21019907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 15 - 252
Target Start/End: Original strand, 39139344 - 39139578
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    ||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||| ||||| ||||||||||||||||||||   ||||    
T  39139344 atgaacacctttaaataagtaatgtgatctaagtttaaatagaccagcgaactaatatatcaattagattaatctctcttttgataatcaacactaattt 39139443  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttga 214  Q
    ||| | ||||||||||||||||  |||| |||||||||||||||||||||||||  | |||||||| |         |||||||| |||||||| ||| |    
T  39139444 ttagggaatttgactatatattgtatcagatttcaattctagtttataataataaatataaatatgca---aaaaaattaatgtagactaataaacttaa 39139540  T
Q  215 attattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    |||| ||||| ||||| || |||||||| |||||||||    
T  39139541 attactgaaacagttagcatatttttattttaattcaa 39139578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 15 - 151
Target Start/End: Complemental strand, 31588056 - 31587920
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | | |||||||||||||||||||||||||||| ||||    
T  31588056 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatattaataagattaaactctcttttgataatcaacatgaattt 31587957  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaat 151  Q
    ||| ||||||||||||||||||  |||| ||||||||    
T  31587956 ttaggaaatttgactatatattgtatcaaatttcaat 31587920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 15 - 249
Target Start/End: Complemental strand, 2062749 - 2062520
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||| ||| ||||||||||||||| ||||||||||||  |||    
T  2062749 atgaacatctttaaataagcaatgtgatcgaagtttaaatagactagcgatttaatagatcaattagattaaactctcttttcataatcaacatgagttt 2062650  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttga 214  Q
    ||||  ||||||||||||||||  |||||||||||||| |||||| ||||| ||  |||||||||| |         ||||||||||||||||||||| |    
T  2062649 ttaaagaatttgactatatattgtatcatatttcaattatagtttgtaatagtacatttaaatatgca----aaaaattaatgtatactaataagcttaa 2062554  T
Q  215 attattgaaaaagttaacaaatttttatgttaatt 249  Q
    |||| ||  ||| ||||||||||||||| ||||||    
T  2062553 attactg-taaatttaacaaatttttattttaatt 2062520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 15 - 252
Target Start/End: Complemental strand, 25107497 - 25107269
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||     || ||||||||||| ||||||||||||| ||||    
T  25107497 atgaacatctttaaataagcaatgtaatctaagtttaaataggctagcgaactaatatatca-----atcaaactctctttcgataatcaacatgaattt 25107403  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttga 214  Q
    |||   ||||| ||||| ||||  |||||||||| |||||||||||||||||||  |||||||||| |         ||||||||||||||||| ||| |    
T  25107402 ttagagaatttaactatgtattgtatcatatttctattctagtttataataatacatttaaatatgca----aaaaattaatgtatactaataaacttaa 25107307  T
Q  215 attattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    |||| ||||||||| |||||||||||||  ||||||||    
T  25107306 attactgaaaaagtcaacaaatttttatcctaattcaa 25107269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 15 - 252
Target Start/End: Complemental strand, 661005 - 660772
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||||||||||||| ||||||||| |||||||||| ||||||||||||||| |  ||| ||| ||||| || || ||||||||||||||||  |||    
T  661005 atgaacatctttaaataaacaatgtgatataagtttaaaaagactagcgaactaacaggtcaattagattaacctatcatttgataatcaacatgagttt 660906  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttga 214  Q
    |||   ||||||||||||||||  ||||||||||| || |||||||||||||||  |||| |||||           ||||||||||||||||||||| |    
T  660905 ttacataatttgactatatattgtatcatatttcagttatagtttataataatacatttatatatg----cgaaaaattaatgtatactaataagcttaa 660810  T
Q  215 attattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    |||||||||||||||||||||| | ||| |||||||||    
T  660809 attattgaaaaagttaacaaatctatatattaattcaa 660772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 15 - 252
Target Start/End: Complemental strand, 1222440 - 1222207
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||| |||||||||| | || |  |||    
T  1222440 atgaaaatctttaaataagcaatgtgatctaagtttaaatagactagcgaaccaatatatcaattagattaaactctattttgataattagcacgagttt 1222341  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttga 214  Q
    |||   ||||||||||||||||  |||||||  ||||| ||| || |||||||| ||||||||||| |         ||||| | || |||||||||| |    
T  1222340 ttagagaatttgactatatattgtatcatataacaattgtaggttgtaataatacgtttaaatatgca----aaaaattaatttgtagtaataagcttaa 1222245  T
Q  215 attattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    |||| ||||||||||| ||||||||||| |||||||||    
T  1222244 attactgaaaaagttatcaaatttttattttaattcaa 1222207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 15 - 252
Target Start/End: Original strand, 10811892 - 10812126
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||   ||| ||| |||||||||||||||||||||| ||| |   ||    
T  10811892 atgaacaactttaaataagcaatgtgatctaagtttaaatggactaacgaactaatggttcaattagattaaactctcttttgataatctacacgatgtt 10811991  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaat-aagcttg 213  Q
    ||| | ||||  ||||||||||  ||| |||||| |||||||||||||||||||  |||| ||||| |         ||||||||||||||| ||||||     
T  10811992 ttagggaattcaactatatattgtatcttatttctattctagtttataataatacatttatatatgca----aaaaattaatgtatactaataaagctta 10812087  T
Q  214 aattattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    |||||||||||||||| |||||||| ||| |||||||||    
T  10812088 aattattgaaaaagtttacaaatttatattttaattcaa 10812126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 17 - 252
Target Start/End: Original strand, 2374283 - 2374514
Alignment:
Q  17 gaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattttt 116  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||| ||| ||| | ||||||||||||||||||||||||     ||||    
T  2374283 gaacatatttaaataagcaatgtgatctaagtttaaatggactagcaaactaatatttcaattagaataaactctcttttgataatcaacacaaggtttt 2374382  T
Q  117 aagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaat-aagcttgaa 215  Q
    | | |||| |||||||||||  |||||||||| |||||||||||||||||||  |||| ||||| |          | || ||||||||| |||||| ||    
T  2374383 agggaattcgactatatattgtatcatatttctattctagtttataataatacatttatatatgca-----aaaaattatatatactaataaagcttaaa 2374477  T
Q  216 ttattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    |||||||||||||| |||||||| ||| |||||||||    
T  2374478 ttattgaaaaagtttacaaatttatattttaattcaa 2374514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 18 - 168
Target Start/End: Complemental strand, 31955804 - 31955654
Alignment:
Q  18 aacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattttta 117  Q
    ||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||  ||| |||||||||||||| |||||| ||||||  ||||||    
T  31955804 aacatttttaaataagcaatgcgatctaagtttaaatagactaacgaactaatatatcgattagattaaactctctttcgataattaacatgagttttta 31955705  T
Q  118 agaaatttgactatatatttgatcatatttcaattctagtttataataata 168  Q
     | | ||||| | ||||||  ||||||||| ||||||||||||||||||||    
T  31955704 gggagtttgattgtatattgtatcatatttgaattctagtttataataata 31955654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 15 - 180
Target Start/End: Original strand, 9617298 - 9617460
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||| |||||||||||||||| |||||| || ||||||| || ||||||||||||||| ||| ||||||||||||||||||||||||||||  |||    
T  9617298 atgaacatatttaaataagcaatgtaatctaaattcaaatagattaacgaactaatatatcaattaaattaaactctcttttgataatcaacatgagttt 9617397  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatg 180  Q
    ||| | || |||||||||||||  | ||||||| ||   |||||||||||||||  ||||||||||    
T  9617398 ttagggaagttgactatatattataccatatttaaa---tagtttataataatacatttaaatatg 9617460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 15 - 177
Target Start/End: Complemental strand, 10710223 - 10710063
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||| ||| ||||||||||||| |||| |||||| ||||||||| ||||||||||||| ||| |||||||||| ||||||||||||| || |||||    
T  10710223 atgaacatattttaataagcaatgtgctctatgtttaagtagactagcaaactaatatatcaattaaattaaactctattttgataatcaagat-gattt 10710125  T
Q  115 ttaaga-aatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaat 177  Q
    || ||| ||||| |||||||| |  ||||||||| ||||||||||||||||||||  |||||||    
T  10710124 tttagagaatttaactatatagt--atcatattttaattctagtttataataatacatttaaat 10710063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 15 - 252
Target Start/End: Complemental strand, 3458010 - 3457779
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||||||||| ||||||||||||| ||||||||||| || ||| |||||||||  ||| ||| |||||||||||||||||||   |||| |   ||    
T  3458010 atgaacatctttaagtaagcaatgtgatttaagtttaaatggattagtgaactaatagttcaattagattaaactctcttttgata---aacacgaggtt 3457914  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaat-aagcttg 213  Q
    ||| | |||| |||||||||||  |||||||||| |||||||||||||||||||  |||| ||||| |         |||| |||||| ||| ||||||     
T  3457913 ttagggaattcgactatatattgtatcatatttctattctagtttataataatacatttatatatgca----aaaaattaacgtataccaataaagctta 3457818  T
Q  214 aattattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    |||||||||||||||| |||||||| ||| |||||||||    
T  3457817 aattattgaaaaagtttacaaatttatattttaattcaa 3457779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 15 - 150
Target Start/End: Original strand, 17006324 - 17006458
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||||||||| ||| |||| |||||||||||||||||||| ||| |||||||| |||| ||  |||||||||||||||||||||||||||   |||    
T  17006324 atgaacatctttaagtaaacaatatgatctaagtttaaatagaccagccaactaata-atcaatttaattaaactctcttttgataatcaacataagttt 17006422  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaa 150  Q
    ||| | ||||||||||||||||  ||||||||||||    
T  17006423 ttagggaatttgactatatattgtatcatatttcaa 17006458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 17570924 - 17570790
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||||||||| ||| |||| |||||||||||||||||||| ||| |||||||| |||| ||  |||||||||||||||||||||||||||   |||    
T  17570924 atgaacatctttaagtaaacaatatgatctaagtttaaatagaccagccaactaata-atcaatttaattaaactctcttttgataatcaacataagttt 17570826  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaa 150  Q
    ||| | ||||||||||||||||  ||||||||||||    
T  17570825 ttagggaatttgactatatattgtatcatatttcaa 17570790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 86 - 252
Target Start/End: Complemental strand, 44652602 - 44652442
Alignment:
Q  86 aactctcttttgataatcaacatggatttttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnn 185  Q
    ||||||||||||||||||||||||  |||||| ||| ||| ||||||||||  |||||||||||||||||||||||||||||   |||||||||| |       
T  44652602 aactctcttttgataatcaacatgagtttttaggaa-tttaactatatattgtatcatatttcaattctagtttataataatgcatttaaatatgca--- 44652507  T
Q  186 nnnnnnttaatgtatactaataagcttgaattattgaaaaagttaacaaatttttatgttaattcaa 252  Q
          |||||| ||||||||||| || |||||||| |||||||||||||||||||| |||||||||    
T  44652506 -aaagattaatgcatactaataagtttaaattattg-aaaagttaacaaatttttattttaattcaa 44652442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 89 - 252
Target Start/End: Complemental strand, 2620225 - 2620066
Alignment:
Q  89 tctcttttgataatcaacatggatttttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnn 188  Q
    ||||||||||||||||||||   |||||| | |||| |||||| ||||  ||||||||||||||||||||||||||||||  |||||||||| |          
T  2620225 tctcttttgataatcaacataagtttttagggaattggactatttattgtatcatatttcaattctagtttataataatacatttaaatatgca----aa 2620130  T
Q  189 nnnttaatgtatactaataagcttgaattattgaaaaagttaacaaatttttatgttaattcaa 252  Q
       | ||||||||||||||||||| ||||| ||||||| |||||||| |||||| |||||||||    
T  2620129 aaataaatgtatactaataagcttaaattactgaaaaatttaacaaaattttattttaattcaa 2620066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 254853 - 254973
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||||||||||||| ||||||||| |||||||||| ||||||||||||||| |  ||| ||| ||||| || || ||||||||||||||||  |||    
T  254853 atgaacatctttaaataaacaatgtgatataagtttaaaaagactagcgaactaacaggtcaattagattaacctatcatttgataatcaacatgagttt 254952  T
Q  115 ttaagaaatttgactatatat 135  Q
    |||   |||||||||||||||    
T  254953 ttacataatttgactatatat 254973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 109
Target Start/End: Complemental strand, 19973079 - 19972986
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatg 109  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| || |||||| ||||  || || |||||||||| ||||||||||||||    
T  19973079 atgaacatctttaaataagcaatgtgatctaag-ttaaatagactagggagctaatagatcaaataaatgaaactctcttgtgataatcaacatg 19972986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 52 - 248
Target Start/End: Original strand, 16997990 - 16998183
Alignment:
Q  52 aatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggatttttaagaaatttgactatatatttgatcatatttcaat 151  Q
    ||||||||||| |||| |||| | | ||| ||||||||||||||||||||||||||||  |||||| | ||||||||||||||||  ||||||| | | |    
T  16997990 aatagactagcaaacttatatgtaaattagattaaactctcttttgataatcaacatgagtttttagggaatttgactatatattgtatcatatataagt 16998089  T
Q  152 tctagtttataataata-tgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttgaattattgaaaaagttaacaaatttttatgttaat 248  Q
    | |||||||||||||||   |||||||||| |         ||||| ||||||||||| ||| ||||| ||||||||||||||  ||||||| |||||    
T  16998090 tatagtttataataataccatttaaatatgca----aaaaattaatttatactaataaacttaaattactgaaaaagttaacacgtttttattttaat 16998183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 15 - 105
Target Start/End: Complemental strand, 17989034 - 17988945
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaa 105  Q
    ||||||||||||||||||||||||| || |||||||||||||||||  |||||||||||||| ||| |||||| || | ||||||||||||    
T  17989034 atgaacatctttaaataagcaatgtaatttaagtttaaatagactaaggaactaatatatcaattagattaaattcac-tttgataatcaa 17988945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 846803 - 846683
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||||||||||||  ||||||||| |||||||||| ||||||||||||| | |  ||| ||| ||||| || || ||||||||||||||||  |||    
T  846803 atgaacatctttaaatacacaatgtgatataagtttaaaaagactagcgaactcacaggtcaattagattaacctatcatttgataatcaacatgagttt 846704  T
Q  115 ttaagaaatttgactatatat 135  Q
    |||   |||||||||||||||    
T  846703 ttacataatttgactatatat 846683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 180
Target Start/End: Original strand, 35458784 - 35458944
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||| | |||||||||| ||||||||| ||  |||||||||||||||| |||||| |||| | ||||||||||||| || |||| | |||||| | ||    
T  35458784 atgaacgtttttaaataagtaatgtgatccaaagttaaatagactagcgagctaatagatcaatgatattaaactctcattcgatatttaacatgaaatt 35458883  T
Q  115 tta-agaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatg 180  Q
    ||| |||| ||| ||| |||     ||||||||||||||||| ||||||||||||  ||||||||||    
T  35458884 ttagagaagttt-actttat-----atcatatttcaattctaatttataataatacatttaaatatg 35458944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 192 - 252
Target Start/End: Original strand, 255088 - 255148
Alignment:
Q  192 ttaatgtatactaataagcttgaattattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| | ||| |||||||||    
T  255088 ttaatgtatactaataagcttaaattattgaaaaagttaacaaatctatatattaattcaa 255148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 846568 - 846508
Alignment:
Q  192 ttaatgtatactaataagcttgaattattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| | ||| |||||||||    
T  846568 ttaatgtatactaataagcttaaattattgaaaaagttaacaaatctatatattaattcaa 846508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 2621477 - 2621410
Alignment:
Q  18 aacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatatta 85  Q
    ||||| |||||||||||||| |||||||||||||||||| ||| ||||||||||||||| ||| ||||    
T  2621477 aacatatttaaataagcaatatgatctaagtttaaatagtctaacgaactaatatatcaattagatta 2621410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 9552507 - 9552563
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaata 71  Q
    |||||||| ||||||||| |||||||||||||||||||||| |||| ||||||||||    
T  9552507 atgaacatatttaaataaacaatgtgatctaagtttaaataaactaacgaactaata 9552563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 39628748 - 39628688
Alignment:
Q  192 ttaatgtatactaataagcttgaattattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    ||||||||||||||||||||| ||| |||||||||| |||||||||| ||| |||||||||    
T  39628748 ttaatgtatactaataagcttaaatgattgaaaaagctaacaaatttatattttaattcaa 39628688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 39638298 - 39638238
Alignment:
Q  192 ttaatgtatactaataagcttgaattattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    ||||||||||||||||||||| ||| |||||||||| |||||||||| ||| |||||||||    
T  39638298 ttaatgtatactaataagcttaaatgattgaaaaagctaacaaatttatattttaattcaa 39638238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 40554453 - 40554397
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaata 71  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||| |||| |||||    
T  40554453 atgaacatctttaaaaaagtaatgtgatctaagtttaaatagactaacgaattaata 40554397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 9552632 - 9552691
Alignment:
Q  121 aatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatg 180  Q
    ||||||||||||||||  |||||| ||||||| |||||||||||||||  ||||||||||    
T  9552632 aatttgactatatattatatcataattcaattttagtttataataatacatttaaatatg 9552691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 49 - 148
Target Start/End: Original strand, 17949841 - 17949940
Alignment:
Q  49 ttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggatttttaagaaatttgactatatatttgatcatatttc 148  Q
    ||||||||  ||||||||||||| |||| ||| |||||||| ||||||||||||||| | |  |||||| | ||||| |||||||| |  ||||||||||    
T  17949841 ttaaatagtatagcgaactaatagatcaattagattaaactatcttttgataatcaatacgagtttttacggaattttactatatactgtatcatatttc 17949940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 252
Target Start/End: Original strand, 21019950 - 21020010
Alignment:
Q  192 ttaatgtatactaataagcttgaattattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    |||||||||| |||||||||| ||||| | ||||||||||||||||| | | |||||||||    
T  21019950 ttaatgtatattaataagcttaaattactaaaaaagttaacaaatttattttttaattcaa 21020010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 40554291 - 40554231
Alignment:
Q  192 ttaatgtatactaataagcttgaattattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    ||||||||||||||||| ||| ||||| | ||||||||||||||||| ||  |||||||||    
T  40554291 ttaatgtatactaataaacttaaattactcaaaaagttaacaaatttataatttaattcaa 40554231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 333
Target Start/End: Complemental strand, 44652410 - 44652361
Alignment:
Q  284 ttattcatatttacttcaatatgccgacctaatatgcctaggaggctttt 333  Q
    |||||||||||||||| |||| |||| ||||||| ||||| |||||||||    
T  44652410 ttattcatatttacttaaataggccggcctaataggcctaagaggctttt 44652361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 252
Target Start/End: Complemental strand, 15727160 - 15727100
Alignment:
Q  193 taatgtatactaataagcttgaattattgaaaaa-gttaacaaatttttatgttaattcaa 252  Q
    ||||||||||||||||| || ||||||||||||| || ||||||||| ||  |||||||||    
T  15727160 taatgtatactaataagtttaaattattgaaaaatgtgaacaaatttataatttaattcaa 15727100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 130; Significance: 3e-67; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 15 - 252
Target Start/End: Complemental strand, 4576794 - 4576561
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||| ||||| ||||||||||||||||||  |||    
T  4576794 atgaaaatctttaaataagcaatgtgatctaagtttaaatagactaacgaactaatatatcaattagattcaactcccttttgataatcaacatgagttt 4576695  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttga 214  Q
    ||| ||||||||||||||||||  ||||||||||||||||||||||||||||||  |||||||||| |         ||||| ||||||||||||||| |    
T  4576694 ttaggaaatttgactatatattatatcatatttcaattctagtttataataataaatttaaatatgca----aaaaattaatatatactaataagcttaa 4576599  T
Q  215 attattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    |||| | ||||||||||||||||||||| |||||||||    
T  4576598 attactaaaaaagttaacaaatttttattttaattcaa 4576561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 15 - 252
Target Start/End: Complemental strand, 6893132 - 6892899
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||| |||  |||    
T  6893132 atgaacatttttaaataagcaatgtgatctgagtttaaatagactagcgaact-atatatcaattagattaaactctcttttgataatcaatatgagttt 6893034  T
Q  115 ttaagaaatttga-ctatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttg 213  Q
    ||| ||||||| | |||||||||  ||||||||||||||||||||||||||||||  |||||||||| |         |||||||||||||||||||||     
T  6893033 ttaggaaatttcacctatatattgtatcatatttcaattctagtttataataatacatttaaatatgca----aaacattaatgtatactaataagctta 6892938  T
Q  214 aattattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    ||||||||||||||||||||| ||||||| || ||||||    
T  6892937 aattattgaaaaagttaacaactttttattttgattcaa 6892899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 15 - 168
Target Start/End: Original strand, 34510383 - 34510536
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||  |||    
T  34510383 atgaacatctttaaataagcaatgtaatctaagtttaaatagactagcgaactaatatatcaattagattaaactctcttttgataatcaacatgagttt 34510482  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataata 168  Q
    ||| ||||||||||||||||||  |||||||||||||| |||||||||||||||    
T  34510483 ttaggaaatttgactatatattgtatcatatttcaattttagtttataataata 34510536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 21 - 252
Target Start/End: Complemental strand, 11432557 - 11432330
Alignment:
Q  21 atctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggatttttaaga 120  Q
    |||||||||| || ||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||       
T  11432557 atctttaaatcagtaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcttttgataatcaacatgaatttttagag 11432458  T
Q  121 aatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttgaattatt 220  Q
    ||||||||||||||||  |||||||||||||||||||||| |||||||  |||||||||| |         |||||||||| || ||||||| ||||| |    
T  11432457 aatttgactatatattgtatcatatttcaattctagtttacaataatacatttaaatatgca----aaaaattaatgtatattagtaagcttaaattact 11432362  T
Q  221 gaaaaagttaacaaatttttatgttaattcaa 252  Q
    ||||||||||||| |||||||| |||||||||    
T  11432361 gaaaaagttaacacatttttattttaattcaa 11432330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 15 - 252
Target Start/End: Complemental strand, 4435349 - 4435116
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||| |||| ||| |||||||| |||||||||||||||||||  |||    
T  4435349 atgaacatctttaaataaacaatgtgatataagtttaaatagactagcaaactaatagatcaattagattaaactatcttttgataatcaacatgagttt 4435250  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttga 214  Q
    ||| | |||| |||||||||||  ||||||||||||||||| |||||| |||||| |||  |||||           |||||||||||||||||| || |    
T  4435249 ttacggaattggactatatattgtatcatatttcaattctaatttatagtaatatatttgtatatg----cgaaaaattaatgtatactaataagtttaa 4435154  T
Q  215 attattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  4435153 attattgaaaaagttaacaaatttatattttaattcaa 4435116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 15 - 252
Target Start/End: Original strand, 32519727 - 32519961
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||||||||||||||||||||| |  |||||||||||| |||||||| ||||| |||| ||| |||||||||||||||||||||||||| |  |||    
T  32519727 atgaacatctttaaataagcaatgtggttgaagtttaaatagtctagcgaattaatagatcaattagattaaactctcttttgataatcaacacgagttt 32519826  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttga 214  Q
    ||||| ||||||||||||||||  |||||||||||||| |||||||||||||||  ||||||| || |          |||||||||||||||||||| |    
T  32519827 ttaaggaatttgactatatattgtatcatatttcaattatagtttataataatacatttaaatgtgca---aaaaaaataatgtatactaataagcttaa 32519923  T
Q  215 attattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    |||| || |||  ||||||||||||||| |||||||||    
T  32519924 attactgtaaagtttaacaaatttttattttaattcaa 32519961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 15 - 252
Target Start/End: Complemental strand, 41819390 - 41819147
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    ||||||||||||||| |  ||||| ||||||||||||||||||||||| ||||||||||||| ||| |||||||| ||||||||||||| |||||  |||    
T  41819390 atgaacatctttaaaaa--caatgcgatctaagtttaaatagactagcaaactaatatatcaattagattaaactttcttttgataatctacatgagttt 41819293  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatat--------gaagnnnnnnnnttaatgtatactaat 206  Q
    ||| | ||||||||||||||||  ||||||||||||||||||||||||||||||  |||||||||         ||         |||||||||||||||    
T  41819292 ttagggaatttgactatatattgtatcatatttcaattctagtttataataatacatttaaatatacaaaaaaaaaaaaaaaaaattaatgtatactaat 41819193  T
Q  207 aagcttgaattattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    |||||| ||||| |||||||||||||| |||||||| |||||||||    
T  41819192 aagcttaaattactgaaaaagttaacatatttttattttaattcaa 41819147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 15 - 168
Target Start/End: Original strand, 7912882 - 7913035
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||| ||||| |||||||||| ||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||| ||||  |||    
T  7912882 atgaacatttttaattaagcaatgttatctaagtttaaatagattagcgaactaatatatcaattagattaaactctcttttgataatcagcatgagttt 7912981  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataata 168  Q
    ||| |||||| ||||||||| |  |||| |||||||||||||||||||||||||    
T  7912982 ttaggaaattcgactatatactgtatcagatttcaattctagtttataataata 7913035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 15 - 252
Target Start/End: Original strand, 22319975 - 22320208
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    ||||| || ||||||||| ||| ||||| ||||||||||||||||||| ||||||||||||| ||  |||||||||| ||||||||||||||||| ||||    
T  22319975 atgaatatgtttaaataaacaacgtgatataagtttaaatagactagcaaactaatatatcaatttgattaaactcttttttgataatcaacatgaattt 22320074  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttga 214  Q
    |||  |||||||||||||||||  |||| ||||||||||||||||||| |||||| | |||||||| |         |||||||| ||||||| |||| |    
T  22320075 ttagaaaatttgactatatattgtatcagatttcaattctagtttatagtaatatatataaatatgca----aaaaattaatgtagactaatatgcttaa 22320170  T
Q  215 attattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    |||| ||||| | |||||| |||||||| |||||||||    
T  22320171 attactgaaacaattaacatatttttattttaattcaa 22320208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 128
Target Start/End: Complemental strand, 23621043 - 23620930
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| || ||||| |||| ||| |||||||||||||||||||||||||| |  |||    
T  23621043 atgaacatatttaaataagcaatgtgatctaagtttaaatagactagcaaattaatagatcaattagattaaactctcttttgataatcaacaagagttt 23620944  T
Q  115 ttaagaaatttgac 128  Q
    ||| | ||||||||    
T  23620943 ttagggaatttgac 23620930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 15 - 162
Target Start/End: Complemental strand, 55957720 - 55957573
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||||||||||||| ||||||||||||||||||| | |||||||||| |||||  ||| ||| |||||||||||||||||||||||||| |   ||    
T  55957720 atgaacatctttaaataaccaatgtgatctaagtttaagtggactagcgaaataatagttcaattagattaaactctcttttgataatcaacacgaggtt 55957621  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttata 162  Q
    |||   |||| |||||||||||  |||||||||| ||| |||||||||    
T  55957620 ttagagaattcgactatatattgtatcatatttctattttagtttata 55957573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 15 - 180
Target Start/End: Original strand, 26660121 - 26660286
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||| |||||||||||||| ||||||||| ||| ||||||||||||| || |||||| |||| | ||||||||||||||||  ||| | |||||| | ||    
T  26660121 atgatcatctttaaataagtaatgtgatccaaggttaaatagactagtgagctaataaatcaataatattaaactctctttcaatatttaacatgaagtt 26660220  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatg 180  Q
    |||  ||| || ||||||||||  |||||||||||||| || ||||||||||||  ||||||||||    
T  26660221 ttagaaaaatttactatatattatatcatatttcaattataatttataataatacatttaaatatg 26660286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 15 - 179
Target Start/End: Original strand, 32526380 - 32526544
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||  |||||||||| || | |||||||||||||||||| |||| |||||||| |||| | | ||||||||| ||||||||| | |||||| ||||    
T  32526380 atgaacaaatttaaataagtaacgcgatctaagtttaaatagattagcaaactaataaatcaataagattaaactcgcttttgatatttaacatgaattt 32526479  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatat 179  Q
    |||   ||||||| |||||| |  |||||||||||| |||||||||||||||||  |||||||||    
T  32526480 ttagagaatttgattatatactatatcatatttcaactctagtttataataatacatttaaatat 32526544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 35 - 249
Target Start/End: Original strand, 56092184 - 56092393
Alignment:
Q  35 aatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggatttttaaga-aatttgactatat 133  Q
    ||||| |||||| |||||||||||| | ||||||||| |||| ||| ||||||  |||||||||||||||||||| ||||||  || ||||||| |||||    
T  56092184 aatgtcatctaaatttaaatagacttg-gaactaatagatcaattaaattaaatcctcttttgataatcaacatgaatttttttgagaatttgattatat 56092282  T
Q  134 atttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttgaattattgaaaaagttaaca 233  Q
    |||  |||||||||||||| |||||||||||||||  ||||||||||  |        |||||| |||||||||||||| ||||| ||||||| || |||    
T  56092283 attgtatcatatttcaatt-tagtttataataatacatttaaatatgcgg----aaaattaatgcatactaataagcttaaattactgaaaaatttgaca 56092377  T
Q  234 aatttttatgttaatt 249  Q
    ||||| ||| ||||||    
T  56092378 aatttatattttaatt 56092393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 16 - 159
Target Start/End: Original strand, 52973694 - 52973836
Alignment:
Q  16 tgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggatttt 115  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||| |   |||||| |  ||||||||||| |||||| || ||    
T  52973694 tgaacatctttaaataagtaatgtgatctaagttaaaatagactagcgaactaatagatcaatgtgattaaatttccttttgataattaacatgaatgtt 52973793  T
Q  116 taagaaatttgactatatatttgatcatatttcaattctagttt 159  Q
    ||   |||| |||||||||||  |||||| ||||||||||||||    
T  52973794 tagagaattggactatatattatatcata-ttcaattctagttt 52973836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 168
Target Start/End: Complemental strand, 37244160 - 37244007
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||| |||||||||||||||||||  ||||||||||| ||||| |||| |||| |||| |||  |||||||||  ||||||||||||||||   ||    
T  37244160 atgaacatttttaaataagcaatgtgatgcaagtttaaataaactagtgaacaaatagatcaattaggttaaactcttctttgataatcaacatgaggtt 37244061  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataata 168  Q
    |||||  |||| || ||| |||  ||| || |||||||||||||||||||||||    
T  37244060 ttaaggcatttcacaataaattgtatcttacttcaattctagtttataataata 37244007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 179
Target Start/End: Original strand, 50153707 - 50153868
Alignment:
Q  18 aacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattttta 117  Q
    ||||| ||||||||||||||||||| |||||||||||||||||  || | |||||||   | | ||||||| ||||||||||||||||| || |||||||    
T  50153707 aacatatttaaataagcaatgtgatataagtttaaatagactaaagatcaaatatatttatgagattaaaccctcttttgataatcaacgtgaattttta 50153806  T
Q  118 agaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatat 179  Q
       ||||||||||||||||   | ||| ||||||| ||||||| |||||||| || ||||||    
T  50153807 gagaatttgactatatattatgttatagttcaattatagtttacaataatatattaaaatat 50153868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 15 - 107
Target Start/End: Complemental strand, 12154376 - 12154284
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaaca 107  Q
    |||||||||||||||||| ||||| |||  |||||||||||| |||| |||||||||  ||||||| ||||||||||||||||||||||||||    
T  12154376 atgaacatctttaaataaacaatgcgattgaagtttaaatagtctagagaactaatagctcagttagattaaactctcttttgataatcaaca 12154284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 180
Target Start/End: Complemental strand, 30920460 - 30920299
Alignment:
Q  19 acatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggatttttaa 118  Q
    ||||||||||||||| |||| |||||||| ||||||| | ||| |||||||||||||| | ||||||||||||||||||||| | || || ||| ||| |    
T  30920460 acatctttaaataagtaatgcgatctaaggttaaataaattagtgaactaatatatcaataatattaaactctcttttgatatttaatat-gatgtttta 30920362  T
Q  119 ga-aatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatg 180  Q
    || || || | ||||||||  ||||||||| ||||||  ||||||||||||  ||||||||||    
T  30920361 gagaactttattatatattatatcatatttaaattcttatttataataatacatttaaatatg 30920299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 22 - 180
Target Start/End: Complemental strand, 43024799 - 43024641
Alignment:
Q  22 tctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattttta-aga 120  Q
    |||||||||||  |||||||||||||||||||||||||  | |||||||| || | | | |||||||| | |||| ||| | |||||| | ||||| |||    
T  43024799 tctttaaataaataatgtgatctaagtttaaatagacttccaaactaatagattaatgagattaaactttgttttaatatttaacatgaacttttagaga 43024700  T
Q  121 aatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatg 180  Q
    |||| |||||||||||  ||||||||| ||||||| ||||||||||||  ||||||||||    
T  43024699 aatt-gactatatattatatcatatttaaattctactttataataataaatttaaatatg 43024641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 163
Target Start/End: Original strand, 10183661 - 10183809
Alignment:
Q  18 aacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacat--ggatttt 115  Q
    ||||| |||||||||| ||| |||  ||| |||||||||| ||||||||||| |||||| ||| | |||||||||||||||||||||| ||  |  ||||    
T  10183661 aacatttttaaataagtaat-tgagttaaatttaaatagattagcgaactaacatatcaattagagtaaactctcttttgataatcaagatgagtttttt 10183759  T
Q  116 taagaaatttgactatatat-ttg-atcatatttcaattctagtttataa 163  Q
    || | ||||| ||||||||| ||| |||||||||||||||||||||||||    
T  10183760 tagggaattttactatatatattgtatcatatttcaattctagtttataa 10183809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 18 - 180
Target Start/End: Complemental strand, 6829142 - 6828981
Alignment:
Q  18 aacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattttta 117  Q
    |||||||||||||||| |||| |||||||  |||||| ||||| | | |||||| |||| | |||||||| ||| ||| |||| | |||||| | |||||    
T  6829142 aacatctttaaataagtaatgcgatctaatgttaaattgactaccaagctaatagatcaatgatattaaattct-tttcgatatttaacatgaagtttta 6829044  T
Q  118 -agaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatg 180  Q
     |||| ||| ||||||||||  ||||||||||||||||| ||||||||||||  ||||||||||    
T  6829043 gagaagttt-actatatattatatcatatttcaattctaatttataataatacatttaaatatg 6828981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 36105755 - 36105840
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgata 100  Q
    |||||||| ||||||||   ||||||||  |||||||||||||||| ||||||||||||||| | | |||||||||||||||||||    
T  36105755 atgaacatttttaaatatttaatgtgattcaagtttaaatagactaacgaactaatatatcaatgagattaaactctcttttgata 36105840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 52264319 - 52264440
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||||||| |||||| |||||||| |||||||||||| ||||||||||||||| || | | | |||||| || |||||| || | || ||| ||||    
T  52264319 atgaacatctttgaataagtaatgtgatataagtttaaataaactagcgaactaataaattaatgagattaaattcccttttggtattaaaaatgaattt 52264418  T
Q  115 ttaagaaa-tttgactatatat 135  Q
    |||||||| ||| |||||||||    
T  52264419 ttaagaaagtttaactatatat 52264440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 167
Target Start/End: Complemental strand, 8956728 - 8956577
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||| ||||||| |||||| ||| |||| ||| |||||| |||| || ||||||| | |||| ||| |||||| |  ||||||||| |  ||||| ||||    
T  8956728 atgagcatcttttaataagtaatatgatataactttaaaaagaccagagaactaacaaatcaattagattaaagttccttttgatatttcacatgaattt 8956629  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataat 167  Q
    ||||| | ||||| ||| ||||  |||||||||||||| ||||||||||||||    
T  8956628 ttaagga-tttgattatgtattatatcatatttcaattatagtttataataat 8956577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 37666086 - 37665919
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||| ||||  ||||  ||||||| |||||||||||| | ||  |||| ||||||||  ||| ||||||||||| ||||||| | ||||||   ||    
T  37666086 atgaacatatttacgtaagtcatgtgatttaagtttaaatataatattgaacgaatatatcgattagattaaactctcatttgatatttaacatgagatt 37665987  T
Q  115 ttaagaaatttgactat--atatttgatcatatttcaattctagtttataataatatgtttaaatatg 180  Q
    ||| |||| ||||||||  |||||  |||||| |||||||| |||||||||| |||  ||||||||||    
T  37665986 ttaggaaacttgactatatatattatatcatacttcaattccagtttataatcatacatttaaatatg 37665919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 164
Target Start/End: Complemental strand, 27292526 - 27292375
Alignment:
Q  18 aacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgata-----atcaacatggat 112  Q
    |||||||||||||||| || ||||||||||||||| || ||||   |||||||| |||| | ||||||||||  |||||||||     ||  | ||| ||    
T  27292526 aacatctttaaataagtaacgtgatctaagtttaactaaactatgaaactaatagatcaatgatattaaactaccttttgatatatatatatatatgaat 27292427  T
Q  113 ttttaagaaatttgactatatatttgatcatatttcaattctagtttataat 164  Q
    |||||   ||||||||||||||||  |||||||| |||||||| ||||||||    
T  27292426 ttttagagaatttgactatatattatatcatattacaattctaatttataat 27292375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 15 - 179
Target Start/End: Original strand, 29145508 - 29145674
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatat-atcagttatattaaactctcttttgataatcaacatggatt 113  Q
    |||||||| |||||||||| ||  |||| |||||||||||||||  | |||||||| | ||||   | |||||||||| |||||||| | | |||   ||    
T  29145508 atgaacatatttaaataagtaacttgatttaagtttaaatagaccggtgaactaatgtgatcaacaagattaaactctattttgatatttaccatatttt 29145607  T
Q  114 tttaagaaa-tttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatat 179  Q
    ||| ||||| ||||||||| ||||  ||| ||||||||||  ||||||||||||||| |||||||||    
T  29145608 ttttagaaaatttgactatctattatatcttatttcaatttcagtttataataatatatttaaatat 29145674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 24014510 - 24014626
Alignment:
Q  20 catctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggatttttaag 119  Q
    |||||||||||||| ||| |||||||| ||||||||||||| | |||||||| |||| |   ||||||||   |||||||| | |||||| | ||||||     
T  24014510 catctttaaataagtaatatgatctaaatttaaatagactaacaaactaatagatcaatatgattaaacttaattttgatatttaacatgaaattttaaa 24014609  T
Q  120 aaatttgactatatatt 136  Q
     ||||||| ||||||||    
T  24014610 gaatttgattatatatt 24014626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 196 - 252
Target Start/End: Original strand, 34514287 - 34514343
Alignment:
Q  196 tgtatactaataagcttgaattattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    ||||| ||||||||||| ||||| | ||||||||||||||||||||| |||||||||    
T  34514287 tgtatgctaataagcttaaattacttaaaaagttaacaaatttttattttaattcaa 34514343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 284 - 333
Target Start/End: Complemental strand, 11432298 - 11432249
Alignment:
Q  284 ttattcatatttacttcaatatgccgacctaatatgcctaggaggctttt 333  Q
    |||||||||||||||| |||| |||||||||||| ||||| |||||||||    
T  11432298 ttattcatatttacttaaataggccgacctaataggcctaagaggctttt 11432249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 82 - 179
Target Start/End: Complemental strand, 39722099 - 39722002
Alignment:
Q  82 attaaactctcttttgataatcaacatggatttttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatat 179  Q
    |||||||||| |||||||| | || |||   |||||  |||||| |||||||||    |||||||||||||||||||||||||||||  |||||||||    
T  39722099 attaaactctattttgatatttaagatgacattttagaaaatttaactatatatgatttcatatttcaattctagtttataataatacatttaaatat 39722002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 50528905 - 50528844
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatca 76  Q
    ||||||||||||||||||  | | |||| ||||||||||||||||| | |||||||||||||    
T  50528905 atgaacatctttaaataactattctgatttaagtttaaatagactatcaaactaatatatca 50528844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 12154224 - 12154164
Alignment:
Q  192 ttaatgtatactaataagcttgaattattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    ||||||||||||||||||||| ||| | |  ||| |||||||||||||||| |||||||||    
T  12154224 ttaatgtatactaataagcttaaatcactctaaatgttaacaaatttttattttaattcaa 12154164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 168
Target Start/End: Complemental strand, 42894791 - 42894708
Alignment:
Q  76 agttatattaaactctcttttgataatcaacatggatttttaagaaatttgactatatatttgatcatatttcaattctagtttataataata 168  Q
    ||||| |||||| |||||||||||| | ||||||  |||||| |||||||||||||         ||||||||||||||||||||||||||||    
T  42894791 agttagattaaaatctcttttgatatttaacatgagtttttaggaaatttgactat---------catatttcaattctagtttataataata 42894708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 259
Target Start/End: Original strand, 7913053 - 7913098
Alignment:
Q  214 aattattgaaaaagttaacaaatttttatgttaattcaaggtgcaa 259  Q
    ||||| ||||||||||||||||||||||| |||||| || ||||||    
T  7913053 aattactgaaaaagttaacaaatttttattttaatttaaagtgcaa 7913098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 168
Target Start/End: Complemental strand, 33052029 - 33051898
Alignment:
Q  38 gtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttt--tgataatcaacatggatttttaagaaatttgactatatat 135  Q
    |||||||||| |||||| |||| ||||| || ||||||| |   ||||| |||||| |  ||||| | |||||| ||||||||  |||||   |||||||    
T  33052029 gtgatctaaggttaaattgactggcgaattattatatcaatgggattaatctctctctcttgatatttaacatgaatttttaaagaatttcgttatatat 33051930  T
Q  136 ttgatcatatttcaattctagtttataataata 168  Q
    |  |||||||||||| |||||||||||||||||    
T  33051929 tatatcatatttcaa-tctagtttataataata 33051898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 50528826 - 50528769
Alignment:
Q  123 tttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatg 180  Q
    ||||||||||||||  ||||||||| |||| || ||||||||||| | ||||||||||    
T  50528826 tttgactatatattatatcatattttaattttactttataataatttatttaaatatg 50528769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 252
Target Start/End: Complemental strand, 12080644 - 12080612
Alignment:
Q  220 tgaaaaagttaacaaatttttatgttaattcaa 252  Q
    ||||||||||||||||||||||| |||||||||    
T  12080644 tgaaaaagttaacaaatttttattttaattcaa 12080612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 177
Target Start/End: Original strand, 25592350 - 25592386
Alignment:
Q  141 catatttcaattctagtttataataatatgtttaaat 177  Q
    ||||||||||||||||||||||||||||  |||||||    
T  25592350 catatttcaattctagtttataataatacatttaaat 25592386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 252
Target Start/End: Complemental strand, 37243984 - 37243925
Alignment:
Q  193 taatgtatactaataagcttgaattattga-aaaagttaacaaatttttatgttaattcaa 252  Q
    ||||||||| |||||||||| ||||||||| ||||| |||||||||| ||| |||||||||    
T  37243984 taatgtata-taataagcttaaattattgaaaaaagataacaaatttatattttaattcaa 37243925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 126; Significance: 8e-65; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 15 - 249
Target Start/End: Original strand, 16054966 - 16055199
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||  |||    
T  16054966 atgaacatctttgaataaacaatgtaatctaagtttaaatagactagcgaactaatatatcaattagattaaactctcttttgataatcaacatgagttt 16055065  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttata--ataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagctt 212  Q
    ||||||||||||||||||||||  |||| |||||||||||||||||||  ||||||  |||||||||| |         |||||||||||||||||||||    
T  16055066 ttaagaaatttgactatatattgtatcagatttcaattctagtttataatataatacatttaaatatgca---aaaaaattaatgtatactaataagctt 16055162  T
Q  213 gaattattgaaaaagttaacaaatttttatgttaatt 249  Q
     ||||| ||||||||||||||||| ||||| ||||||    
T  16055163 aaattactgaaaaagttaacaaatgtttattttaatt 16055199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 15 - 252
Target Start/End: Original strand, 9730137 - 9730369
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||||||||||||||||||||| | ||| |||| ||||||||||||||||||| |||| ||| ||||||||||||||||||||||||| ||  |||    
T  9730137 atgaacatctttaaataagcaatgtggtataaatttagatagactagcgaactaatagatcaattaaattaaactctcttttgataatcaacctgagttt 9730236  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttga 214  Q
    |||   |||||||| |||||||  ||||||||||||||||||||||||||||||  |||||||||| |         ||||||||||||||||| ||| |    
T  9730237 ttagagaatttgaccatatattgtatcatatttcaattctagtttataataatacatttaaatatgta-----aaaattaatgtatactaataaccttaa 9730331  T
Q  215 attattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    ||||  |||||||||||||||||||||| |||||||||    
T  9730332 attaccgaaaaagttaacaaatttttattttaattcaa 9730369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 43898074 - 43898307
Alignment:
Q  18 aacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattttta 117  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||| ||| ||||||||||||||||||||||||||||  ||||||    
T  43898074 aacatctttaaataaacaatgtgatctaagtttaaatagtctagcaaactaatatatcaattagattaaactctcttttgataatcaacatgtgttttta 43898173  T
Q  118 agaaatttgactatatat-ttg-atcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttgaa 215  Q
      ||| |||||||||||| ||| | ||||||||||||||| || |||||||||  |||||||||| |         |||||||||  ||||||| || ||    
T  43898174 gaaaagttgactatatatattgtaccatatttcaattctatttaataataatacttttaaatatgca---aaaaaattaatgtattttaataagtttaaa 43898270  T
Q  216 ttattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    ||| | ||||||||||||||||||||| |||||||||    
T  43898271 ttacttaaaaagttaacaaatttttattttaattcaa 43898307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 15 - 252
Target Start/End: Original strand, 10057225 - 10057461
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatgg---a 111  Q
    |||||| ||||||||||| ||||||||| |||||||||||||||||||||| ||||| |||| ||| |||||| | |||||||||| |||||||||        
T  10057225 atgaacttctttaaataaacaatgtgatataagtttaaatagactagcgaattaatagatcaattagattaaaatatcttttgatagtcaacatggtatt 10057324  T
Q  112 tttttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagct 211  Q
    |||||| |  |||||||||||||||  ||||||||||||||||||||||||||||||  |||| |||||           |||||||||||||||||| |    
T  10057325 tttttacgggatttgactatatattgtatcatatttcaattctagtttataataatacatttatatatg----cgaaaaattaatgtatactaataagtt 10057420  T
Q  212 tgaattattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    | ||| ||||||||||||||||||||| ||| |||||||||    
T  10057421 taaataattgaaaaagttaacaaatttatattttaattcaa 10057461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 15 - 168
Target Start/End: Original strand, 16735053 - 16735206
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    ||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||  ||| ||| | |||||||||||| ||||||||||| |   ||    
T  16735053 atgaacatctttaaataagtaatgtgatgtaagtttaaatggactagcgaactaatagttcaattaaactaaactctctttcgataatcaacacgaggtt 16735152  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataata 168  Q
    ||| |||||| |||||||||||  |||||||||| |||||||||||||||||||    
T  16735153 ttaggaaattcgactatatattgtatcatatttctattctagtttataataata 16735206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 19 - 252
Target Start/End: Original strand, 5442948 - 5443175
Alignment:
Q  19 acatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggatttttaa 118  Q
    |||| ||||||||||||||| ||||||||||||||||||||| |||||||||| |||| ||| ||||||||||||||||||||||||| ||    ||||     
T  5442948 acatatttaaataagcaatgcgatctaagtttaaatagactaacgaactaatagatcaattagattaaactctcttttgataatcaacttg--agtttag 5443045  T
Q  119 gaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttgaatta 218  Q
    | ||||||||||||||||  ||||||||||||||||| ||||||| ||||  |||| |||||           |||||||||||||| |||||| |||||    
T  5443046 ggaatttgactatatattatatcatatttcaattctaatttataagaatacatttatatatg----tgaaaagttaatgtatactaacaagcttaaatta 5443141  T
Q  219 ttgaaaaagttaacaaatttttatgttaattcaa 252  Q
      |||||||||  ||||||| ||| |||||||||    
T  5443142 ccgaaaaagtttgcaaatttatattttaattcaa 5443175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 15 - 252
Target Start/End: Original strand, 5880235 - 5880471
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||   || ||| |||||||||||||||| ||||||||| |   ||    
T  5880235 atgaacatctttaaataagcaatgtgatctaagtttaaatggactagcgaactaata-gccaattagattaaactctcttttggtaatcaacaagagatt 5880333  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaat-aagcttg 213  Q
    ||| | |||| |||||||||||  ||||||| || |||||||||||||||||||  || | ||||| |         ||||||||||||||| ||||||     
T  5880334 ttagggaattcgactatatattgtatcatatatccattctagtttataataatacattgatatatgca-aaaaaaaattaatgtatactaataaagctta 5880432  T
Q  214 aattattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    |||||| |||||| || |||||||| ||| |||||||||    
T  5880433 aattatcgaaaaattttacaaatttatattttaattcaa 5880471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 15 - 252
Target Start/End: Complemental strand, 9716388 - 9716154
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    ||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||  ||| ||| ||||||||||||||||||||||||||     ||    
T  9716388 atgaatatctttaaataagcaatgtgatctaagtttacattgactagcgaactaatagttcaattagattaaactctcttttgataatcaacacaaggtt 9716289  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaat-aagcttg 213  Q
    ||| | |||| |||||||||||   ||||||||| |||||||||||||||||||  |||| ||||| |         ||||||||||||||| ||||||     
T  9716288 ttagggaattcgactatatattgcgtcatatttctattctagtttataataatacatttatatatgca----aaaaattaatgtatactaataaagctta 9716193  T
Q  214 aattattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    ||||||| |||||||| ||  |||| ||| |||||||||    
T  9716192 aattattaaaaaagtttacttatttatattttaattcaa 9716154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 15 - 168
Target Start/End: Original strand, 1845238 - 1845391
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    ||||||||||||||||||||| | |||||||| ||||||| ||||||||||||||||  | | ||| |||||||||||||||||||||||||| |   ||    
T  1845238 atgaacatctttaaataagcattatgatctaattttaaatggactagcgaactaatagtttaattagattaaactctcttttgataatcaacacgaggtt 1845337  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataata 168  Q
    ||  |||||| |||||||||||  |||||||||| |||||||||||||||||||    
T  1845338 ttgggaaattcgactatatattgtatcatatttctattctagtttataataata 1845391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 15 - 249
Target Start/End: Complemental strand, 4816808 - 4816577
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||| ||||||||||||||||| ||||||||||||| ||| ||||||||||||  ||| ||| ||||||||||||||||||||| |||| |   ||    
T  4816808 atgaacatatttaaataagcaatgtggtctaagtttaaatggaccagcgaactaatagttcaattaaattaaactctcttttgataatgaacacgaggtt 4816709  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaat-aagcttg 213  Q
    ||| | |||| || |||||| |  | |||||||| |||||||||||||||||||  |||| ||||| |         ||||||||||||||| ||||||     
T  4816708 ttagggaattcgattatatactgtaccatatttctattctagtttataataatacatttatatatgca----aaaacttaatgtatactaataaagctta 4816613  T
Q  214 aattattgaaaaagttaacaaatttttatgttaatt 249  Q
    |||||||||||||||| | |||||| ||| ||||||    
T  4816612 aattattgaaaaagtttataaatttatattttaatt 4816577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 15 - 168
Target Start/End: Original strand, 32700612 - 32700765
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    ||||||||||||||||||| ||||||||  ||| ||||||||||||||||||||||| |||| | |||||||||||||||| |||| | |||||| | ||    
T  32700612 atgaacatctttaaataagtaatgtgattcaaggttaaatagactagcgaactaataaatcaatgatattaaactctctttcgatatttaacatgaagtt 32700711  T
Q  115 tta-agaaatttgactatatatttgatcatatttcaattctagtttataataata 168  Q
    ||| |||| ||| ||||||||||   |||||||||||||||| ||||||||||||    
T  32700712 ttagagaacttt-actatatattatttcatatttcaattctaatttataataata 32700765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 18 - 168
Target Start/End: Complemental strand, 38556593 - 38556443
Alignment:
Q  18 aacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattttta 117  Q
    ||||| ||||||||||||||||||| ||||||||||| |||| ||||||||| |  ||| | | |||||||||||||||||||||||||| | | |||||    
T  38556593 aacatatttaaataagcaatgtgatataagtttaaatggactggcgaactaaaagttcaatcagattaaactctcttttgataatcaacacgaagtttta 38556494  T
Q  118 agaaatttgactatatatttgatcatatttcaattctagtttataataata 168  Q
     | |||| |||||||||||  |||||||||| ||||||||||| |||||||    
T  38556493 gggaattcgactatatattgtatcatatttctattctagtttaaaataata 38556443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 5712656 - 5712491
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||| |||||||||| ||||||||||||| |||||||||||||| |  ||||| |||| | ||||||||||||||||||||| | |||||| | ||    
T  5712656 atgaacatatttaaataagtaatgtgatctaaggttaaatagactagcaagttaatagatcaatgatattaaactctcttttgatatttaacatgaagtt 5712557  T
Q  115 tta-agaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatg 180  Q
    ||| |||| ||| |||||||||   |||| |||||||||||| ||||||||||||  ||||||||||    
T  5712556 ttagagaacttt-actatatatcatatcacatttcaattctaatttataataatacatttaaatatg 5712491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 39848618 - 39848539
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctctt 94  Q
    ||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  39848618 atgaacatctttaaataagtaatgtgattcaagtttaaatagactagcgaactaatagatcagtgatattaaactctctt 39848539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 13559956 - 13560185
Alignment:
Q  18 aacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattttta 117  Q
    ||||| |||||| ||||||||  |||||||||||||||||||||| | | ||||||||  ||| ||||| |||||||||||||||||||||   ||||||    
T  13559956 aacatttttaaacaagcaatgcaatctaagtttaaatagactagcaatc-aatatatcgattagattaatctctcttttgataatcaacatcagttttta 13560054  T
Q  118 agaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttgaatt 217  Q
     | |||| ||||||||| |  || |||||||||||| | ||||||||||||  ||||||| || |         |||||||||||||||||  || ||||    
T  13560055 gggaattcgactatatactatattatatttcaattcaaatttataataatacatttaaatgtgca----aaaaattaatgtatactaataaaattaaatt 13560150  T
Q  218 attgaaaaagttaacaaatttttatgttaattcaa 252  Q
    | ||||||||||||| ||||  ||| |||||||||    
T  13560151 actgaaaaagttaactaattcatattttaattcaa 13560185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 168
Target Start/End: Original strand, 7598936 - 7599089
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||| |||||||||| || ||||||| | ||| ||||||||| ||||||||||||||| |   ||||| | | ||||||||| | |||||| |||     
T  7598936 atgaacatatttaaataagtaacgtgatctgaatttgaatagactatcgaactaatatatcaatgtgattaagcccccttttgatatttaacatg-atta 7599034  T
Q  115 ttaaga-aatttgactatatatttgatcatatttcaattctagtttataataata 168  Q
    || ||| ||||||||||||||||  |||||||||||||| |||||||||||||||    
T  7599035 tttagagaatttgactatatattatatcatatttcaattatagtttataataata 7599089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 168
Target Start/End: Complemental strand, 12677902 - 12677749
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    ||||| |||||||||||||||| | | ||||| |||||||| ||||| | ||||||||||||   | |||||||| | |||||||| | |||||| ||||    
T  12677902 atgaatatctttaaataagcaacgcgttctaaatttaaataaactagtggactaatatatcaacgagattaaacttttttttgatatttaacatgaattt 12677803  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataata 168  Q
    ||||  ||||||| |||||| |  ||||||||||| ||||| | ||||||||||    
T  12677802 ttaaagaatttgattatataatatatcatatttcagttctactatataataata 12677749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 152
Target Start/End: Original strand, 36758125 - 36758262
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    ||||||||||||||||||| || |||||| |||  || | |||| | |||||||||| |||| | ||||||||||||||||||||| | |||||| |  |    
T  36758125 atgaacatctttaaataagtaacgtgatcaaagagtatacagacgaacgaactaatagatcaatgatattaaactctcttttgatatttaacatgaaggt 36758224  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaatt 152  Q
    |||| ||| || ||||||||||  ||||||||||||||    
T  36758225 ttaaaaaactttactatatattatatcatatttcaatt 36758262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 179
Target Start/End: Complemental strand, 37259412 - 37259256
Alignment:
Q  16 tgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaact-ctcttttgataatcaacatggattt 114  Q
    ||||||||||||||| || |||||||||||||||||||||||| | ||||||||        | | |||||||| || |||| ||| | |||| | ||||    
T  37259412 tgaacatctttaaatcagtaatgtgatctaagtttaaatagacaaacgaactaa--------tgagattaaactcctttttttatatttaacacgaattt 37259321  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatat 179  Q
    |||| |||||| | ||||||||  ||||| ||| |||||||||||| ||||| || |||||||||    
T  37259320 ttaaaaaatttaattatatattatatcatgttttaattctagtttacaataaaatatttaaatat 37259256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 16202200 - 16202142
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatata 73  Q
    ||||||||||||||||||| ||||||||  ||| ||||||||||| |||| ||||||||    
T  16202200 atgaacatctttaaataagtaatgtgattcaaggttaaatagacttgcgagctaatata 16202142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 16202100 - 16202049
Alignment:
Q  129 tatatatttgatcatatttcaattctagtttataataatatgtttaaatatg 180  Q
    ||||||||  ||||||||||||||||| ||||||||||||  ||||||||||    
T  16202100 tatatattatatcatatttcaattctaatttataataatacatttaaatatg 16202049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 168
Target Start/End: Original strand, 27023424 - 27023502
Alignment:
Q  90 ctcttttgataatcaacatggatttttaagaaatttgactatatatttgatcatatttcaattctagtttataataata 168  Q
    ||||||||||| | |||||  ||||||||| |||||  ||| ||||   |||||||||||||| |||||||||||||||    
T  27023424 ctcttttgatatttaacataaatttttaaggaatttctctacatatgatatcatatttcaattgtagtttataataata 27023502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 252
Target Start/End: Original strand, 16735232 - 16735285
Alignment:
Q  200 tactaataa-gcttgaattattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    ||||||||| |||| |||||||||||||||| |||||||| ||| |||||||||    
T  16735232 tactaataaagcttaaattattgaaaaagtttacaaatttatattttaattcaa 16735285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 26714115 - 26714075
Alignment:
Q  139 atcatatttcaattctagtttataataatatgtttaaatat 179  Q
    |||||||||||||||||||| | |||||||| |||||||||    
T  26714115 atcatatttcaattctagttaacaataatatatttaaatat 26714075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 116; Significance: 7e-59; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 17 - 252
Target Start/End: Original strand, 22990508 - 22990743
Alignment:
Q  17 gaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattttt 116  Q
    |||||||||| ||||||||||||||| ||||||||||||||||| | || |||||||||| ||| |||||||||||||| |||||| || ||| ||||||    
T  22990508 gaacatcttttaataagcaatgtgatataagtttaaatagactaacaaattaatatatcaattagattaaactctctttagataataaaaatgaattttt 22990607  T
Q  117 aagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttgaat 216  Q
    | | ||||||||||||||||  |||||||||||||| |||||||||||||||| |||||||||| |         ||||||||||||||||||||| |||    
T  22990608 agggaatttgactatatattgtatcatatttcaattatagtttataataatatatttaaatatgcaaaaaaattattaatgtatactaataagcttaaat 22990707  T
Q  217 tattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    || ||||||||||||||||| ||||| |||| ||||    
T  22990708 tactgaaaaagttaacaaatatttattttaactcaa 22990743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 15 - 240
Target Start/End: Complemental strand, 29563750 - 29563536
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    ||||||||||||||||||||||||||||||||      |||||||||||||||||||||||| ||| |||||||||||||||||||||||| | |  |||    
T  29563750 atgaacatctttaaataagcaatgtgatctaa------atagactagcgaactaatatatcaattagattaaactctcttttgataatcaa-aagagttt 29563658  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttga 214  Q
    ||| ||||||| ||||||||||  ||||||||||||||||||||||||||||||  |||||||||| |         ||||||||||||||||||||| |    
T  29563657 ttaggaaatttaactatatattgtatcatatttcaattctagtttataataatacatttaaatatgca----taaaattaatgtatactaataagcttaa 29563562  T
Q  215 attattgaaaaagttaacaaattttt 240  Q
    |||| |||||||||||||||||||||    
T  29563561 attactgaaaaagttaacaaattttt 29563536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 15 - 179
Target Start/End: Original strand, 29697483 - 29697647
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | ||| ||||||||||||||||||||||||||||  |||    
T  29697483 atgaacatctttaaataagcaatgcgatctaagtttaaatagactaacgaactaatatattaattagattaaactctcttttgataatcaacatgagttt 29697582  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatat 179  Q
    ||| | |||||||||||||||   || |||||||||||||||||||||||||||  |||||||||    
T  29697583 ttacggaatttgactatatatggtattatatttcaattctagtttataataatacatttaaatat 29697647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 15 - 168
Target Start/End: Complemental strand, 21523924 - 21523770
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||| ||||    
T  21523924 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcaattagattaatctctcttttgataatcaacatgaattt 21523825  T
Q  115 tta-agaaatttgactatatatttgatcatatttcaattctagtttataataata 168  Q
    |||  |  |||||||||||||||  |||| ||||||||| |||||||||||||||    
T  21523824 ttaggggtatttgactatatattgtatcagatttcaattttagtttataataata 21523770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 15 - 252
Target Start/End: Original strand, 9503823 - 9504057
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||| ||| |||||||||||||| |||||||||||||   ||    
T  9503823 atgaacatctttaaataagcaatgtgatctaagtttaaatggactagcgaactaataattcaattagattaaactctctttagataatcaacatgaggtt 9503922  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaat-aagcttg 213  Q
    ||| |||||| |||||||||||  |||||||||| |||||||||||||||||||  |||| ||||| |         ||||||||||||||| ||| ||     
T  9503923 ttaggaaattcgactatatattgtatcatatttctattctagtttataataatacatttatatatgca----aaaaattaatgtatactaataaagatta 9504018  T
Q  214 aattattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    |||||||||||||||| ||| |||| ||  |||||||||    
T  9504019 aattattgaaaaagtttacatatttatactttaattcaa 9504057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 43464612 - 43464450
Alignment:
Q  19 acatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggatttttaa 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||| ||||||||||||||||||| |||||||     
T  43464612 acatctttaaataagcaatgtgatctaagtttaaatagactagcgaattaatatatcaattagattaaactttcttttgataatcaacatgaatttttag 43464513  T
Q  119 gaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaa 182  Q
    |  |||||||  ||||||  |||| ||||||||||||| |||||||||||  | ||||||||||    
T  43464512 ggtatttgaccgtatattgtatcaaatttcaattctag-ttataataatagatataaatatgaa 43464450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 25 - 252
Target Start/End: Original strand, 20601600 - 20601827
Alignment:
Q  25 ttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggatttttaagaaatt 124  Q
    ||||||||| |||| | | ||||||||||||||||| ||||||||||||||| ||| ||||||||| ||||||||||||||||||  |||||| | ||||    
T  20601600 ttaaataagtaatgcgttataagtttaaatagactaacgaactaatatatcaattagattaaactcccttttgataatcaacatgagtttttagggaatt 20601699  T
Q  125 tgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagct---tgaattattg 221  Q
    ||||||||||||  |||||||||||||| |||||||||||||||  |||||||||            ||||||||||||||||| ||   | ||||| ||    
T  20601700 tgactatatattgtatcatatttcaattatagtttataataatacatttaaatat---accaaaaaattaatgtatactaataaacttaattaattactg 20601796  T
Q  222 aaaaagttaacaaatttttatgttaattcaa 252  Q
    ||||||||||||||||||||| |||||||||    
T  20601797 aaaaagttaacaaatttttattttaattcaa 20601827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 27048570 - 27048794
Alignment:
Q  19 acatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggatttttaa 118  Q
    ||||||||||||||  ||||| || ||||||||||||||||| |||| ||||| |||| | | |||||||| |||||||||||||||||||  ||||||     
T  27048570 acatctttaaataactaatgtaatataagtttaaatagactaccgaattaatagatcaataagattaaactatcttttgataatcaacatgagtttttac 27048669  T
Q  119 gaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttgaatta 218  Q
    ||||||||||||||||||  |||||||||||||| |||||||||||||||  |||| |||||           |||||||||||||||||  || |||||    
T  27048670 gaaatttgactatatattgtatcatatttcaattatagtttataataatacatttatatatg----cgaaaaattaatgtatactaataatgttaaatta 27048765  T
Q  219 ttgaaaaagttaacaaatttttatgttaa 247  Q
    |||||||||||||||||||| ||| ||||    
T  27048766 ttgaaaaagttaacaaatttatattttaa 27048794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 15 - 167
Target Start/End: Complemental strand, 45613307 - 45613155
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    ||||| |||||||||||| ||||||| ||| ||||||| ||||||| ||||||||| ||||| ||| ||||||||||||||||||||||||| || ||||    
T  45613307 atgaatatctttaaataaacaatgtggtcttagtttaactagactaacgaactaatgtatcaattagattaaactctcttttgataatcaacgtgaattt 45613208  T
Q  115 tta-agaaatttgactatatatttg-atcatatttcaattctagtttataataat 167  Q
    ||| ||||  ||||||||||||||| |||||||||||||||||||||||||||||    
T  45613207 ttacagaa--ttgactatatatttgtatcatatttcaattctagtttataataat 45613155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 15 - 168
Target Start/End: Complemental strand, 51880368 - 51880215
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    ||||| |||||||| ||||||||||||||||||||||||| ||||||| |||||||   ||| ||| |||||||||||||||||||||||||| |   ||    
T  51880368 atgaatatctttaagtaagcaatgtgatctaagtttaaatggactagcaaactaattgttcaattagattaaactctcttttgataatcaacacgaggtt 51880269  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataata 168  Q
    |||  |||||||||||||||||  |||||||||  |||||||||||||||||||    
T  51880268 ttagaaaatttgactatatattgtatcatatttttattctagtttataataata 51880215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 18 - 180
Target Start/End: Complemental strand, 11837016 - 11836854
Alignment:
Q  18 aacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattttta 117  Q
    |||| ||||||||||| ||||||||| ||| |||||||||||||||| ||||||||||| | |||||||||||||||| |||| | |||||  | |||||    
T  11837016 aacacctttaaataagtaatgtgatcaaaggttaaatagactagcgagctaatatatcaatgatattaaactctctttcgatatttaacatcaagtttta 11836917  T
Q  118 agaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatg 180  Q
       ||||| ||||||||||  ||||||||||||||||| ||||||||||||  ||||||||||    
T  11836916 gagaattttactatatattatatcatatttcaattctaatttataataatacatttaaatatg 11836854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 15 - 180
Target Start/End: Original strand, 36159170 - 36159336
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctctttt-gataatcaacatggatt 113  Q
    |||||||| |||||||||| ||| ||||| ||| |||||||| ||||||| ||||||||||| |||||||||||||| ||||  ||| | |||||| | |    
T  36159170 atgaacatatttaaataagtaatatgatccaagattaaatagcctagcgagctaatatatcaattatattaaactcttttttcaatatttaacatgaagt 36159269  T
Q  114 tttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatg 180  Q
    ||||   || || ||||||||||  ||||||||||||||||| ||||||||||||  ||||||||||    
T  36159270 tttagataactttactatatattatatcatatttcaattctaatttataataatacatttaaatatg 36159336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 180
Target Start/End: Original strand, 44890658 - 44890823
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    ||||||||||||||||||| ||||||||  ||| ||||||||||||||||  ||||| |||| | |||||||||||||||| |||| | |||||| | ||    
T  44890658 atgaacatctttaaataagtaatgtgattcaaggttaaatagactagcgagataatagatcaatgatattaaactctctttcgatatttaacatgaagtt 44890757  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatg 180  Q
    |||  ||| || | | ||||||  || |||||||| ||||| ||||||||||||  ||||||||||    
T  44890758 ttagaaaactttaatctatattatattatatttcagttctaatttataataatacatttaaatatg 44890823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 180
Target Start/End: Complemental strand, 33458732 - 33458569
Alignment:
Q  17 gaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattttt 116  Q
    |||||| |||||| ||| |||||||| |||||||||| ||||||| ||||||||||||||   | |||||||| ||||||| || | |||||| |||| |    
T  33458732 gaacatttttaaagaagtaatgtgatttaagtttaaagagactagtgaactaatatatcaacgaaattaaactttcttttggtatttaacatgaatttat 33458633  T
Q  117 aagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatg 180  Q
    |   || |||| || ||| |  |||| |||||||||||||||||||||||||  ||||||||||    
T  33458632 agagaacttgattaaatactatatcaaatttcaattctagtttataataatacatttaaatatg 33458569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 31132978 - 31133080
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||| | |||||||| |||| | | |||||||||||||||  || | |||||| ||||    
T  31132978 atgaacatctttaaataagtaatgtgatctaagtttaaatatactatcaaactaatagatcaatgagattaaactctctttttgtatttaacatgaattt 31133077  T
Q  115 tta 117  Q
    |||    
T  31133078 tta 31133080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 29719350 - 29719449
Alignment:
Q  39 tgatctaagtttaaatagactagcgaactaatatatcagttat--attaaactctcttttgataatcaacatggatttttaagaaatttgactatatatt 136  Q
    ||||||||||||  |||||||||||||||||||||||| ||||  ||||||||||||| |||||||||||||   |||||| |||| | |||||||||||    
T  29719350 tgatctaagtttgcatagactagcgaactaatatatcaattatagattaaactctcttatgataatcaacatacgtttttaggaaagtggactatatatt 29719449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 152
Target Start/End: Complemental strand, 43946781 - 43946648
Alignment:
Q  21 atctttaaataagcaatgtg--atctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggatttttaa 118  Q
    ||||||||||||| ||||||  || ||||||||||||||||  | |||||||| |||| | | |||||||||  |||||| | | || ||| |||||||     
T  43946781 atctttaaataagtaatgtgtgatttaagtttaaatagactgacaaactaataaatcaataacattaaactccattttgacatttaatatgaatttttag 43946682  T
Q  119 gaaatttgactatatatttgatcatatttcaatt 152  Q
      ||||||||||||||||  || |||||||||||    
T  43946681 agaatttgactatatattacataatatttcaatt 43946648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 27483447 - 27483386
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatca 76  Q
    |||||||| |||||||||| |||||||| |||| ||||||||||||| || |||||| ||||    
T  27483447 atgaacatatttaaataagtaatgtgatttaagattaaatagactagtgagctaatagatca 27483386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 252
Target Start/End: Complemental strand, 45613147 - 45613099
Alignment:
Q  204 aataagcttgaattattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    ||||||||| ||||| ||||||||||| ||||||||||| |||||||||    
T  45613147 aataagcttaaattactgaaaaagttatcaaatttttattttaattcaa 45613099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 118
Target Start/End: Original strand, 43242041 - 43242142
Alignment:
Q  16 tgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggatttt 115  Q
    ||||||| |||||||||| | ||||||||||||||||||||| |||  |||||||| |||| |   ||||| ||| ||||||||| | ||||||  ||||    
T  43242041 tgaacatgtttaaataagtagtgtgatctaagtttaaatagattag-aaactaatagatcaatgtgattaatctcccttttgatatttaacatgagtttt 43242139  T
Q  116 taa 118  Q
    |||    
T  43242140 taa 43242142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 180
Target Start/End: Original strand, 52426413 - 52426463
Alignment:
Q  130 atatatttgatcatatttcaattctagtttataataatatgtttaaatatg 180  Q
    |||||||  ||||||||||||||||| ||||||||||||  ||||||||||    
T  52426413 atatattatatcatatttcaattctaatttataataatacatttaaatatg 52426463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 201 - 249
Target Start/End: Complemental strand, 43464437 - 43464389
Alignment:
Q  201 actaataagcttgaattattgaaaaagttaacaaatttttatgttaatt 249  Q
    |||||||||||| ||||| ||||| |||||||| |||||||| ||||||    
T  43464437 actaataagcttaaattactgaaacagttaacatatttttattttaatt 43464389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 104 - 180
Target Start/End: Complemental strand, 44045761 - 44045685
Alignment:
Q  104 aacatggatttttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatg 180  Q
    |||||| ||| ||||  ||||||  ||||||||  |||||||||||||| ||||||||||||||   ||||||||||    
T  44045761 aacatgaattattaaagaatttggatatatattatatcatatttcaattatagtttataataattcatttaaatatg 44045685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 174
Target Start/End: Original strand, 46351465 - 46351497
Alignment:
Q  142 atatttcaattctagtttataataatatgttta 174  Q
    |||||||||||||||||||||||||||| ||||    
T  46351465 atatttcaattctagtttataataatatattta 46351497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 114; Significance: 1e-57; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 15 - 252
Target Start/End: Original strand, 9479286 - 9479518
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||| ||||||||||||||| |||||| ||||||||||||||||  |||||||||||| |||  ||||| |||||||||||||||||| || ||||    
T  9479286 atgaacatatttaaataagcaatgcgatctatgtttaaatagactagctgactaatatatcaattagtttaaattctcttttgataatcaacgtgaattt 9479385  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttga 214  Q
    ||||| |||||||||||||||   ||||||||||||||||||||||||||||||  |||||| |||||         ||||||||||||||||||||| |    
T  9479386 ttaaggaatttgactatatatcgtatcatatttcaattctagtttataataatacatttaaacatgaa-----aaaattaatgtatactaataagcttaa 9479480  T
Q  215 attattgaaaaagttaacaaatttttatgttaattcaa 252  Q
     |||||||||||||| | |||||||||| |||||||||    
T  9479481 cttattgaaaaagttgataaatttttattttaattcaa 9479518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 42672763 - 42672993
Alignment:
Q  18 aacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattttta 117  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| | |||||    
T  42672763 aacatcttaaaataagcaatgtgatataagtttaaatagactagcgaactaatatatcaattagattaaactctcttttgataatcaacatgaaatttta 42672862  T
Q  118 agaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttgaatt 217  Q
    |  ||||||||||||||||  |||| |||||||||||||||||||||||||  | |||||||| |         |||||||| |||||||| | | ||||    
T  42672863 aagaatttgactatatattgtatcacatttcaattctagtttataataatacatataaatatgca----aaaaattaatgtagactaataaacataaatt 42672958  T
Q  218 attgaaaaagttaacaaatttttatgttaattcaa 252  Q
    | ||||| |||||||| |||||||| |||||||||    
T  42672959 actgaaacagttaacatatttttattttaattcaa 42672993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 15 - 252
Target Start/End: Original strand, 25685293 - 25685526
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    ||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||  ||||    
T  25685293 atgaatatatttaaataagcaatatgatctaagtttaaatagactagcgaactaatatatcaattagattaaactctcttttgataatcaacataaattt 25685392  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttga 214  Q
    ||| | ||||||||||||||||  |||| |||||||||||||||||||||||||  | |||||||| |         ||| |||| |||||||| ||| |    
T  25685393 ttagggaatttgactatatattgtatcagatttcaattctagtttataataatacatataaatatgca----aaaaattagtgtagactaataaacttaa 25685488  T
Q  215 attattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    |||| ||||| |||||||| |||||||| |||||||||    
T  25685489 attactgaaacagttaacatatttttattttaattcaa 25685526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 15 - 252
Target Start/End: Original strand, 39727237 - 39727470
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||| ||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||||| ||| | ||    
T  39727237 atgagcatatttaaatgagcaatgttatctaagtttaaatagactagcgaactaatatatcaattagattaaattctcttttgataatcaagatgaactt 39727336  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttga 214  Q
    ||| | ||||||||||||||||  |||||||||||||| |||||||||||||||  |||||| ||| |         ||||  ||||||||||| ||| |    
T  39727337 ttagggaatttgactatatattgtatcatatttcaattatagtttataataatacatttaaacatgca----aaaaattaacatatactaataaacttaa 39727432  T
Q  215 attattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    |||||||||||||||||||||||||||| |||||||||    
T  39727433 attattgaaaaagttaacaaatttttattttaattcaa 39727470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 15 - 242
Target Start/End: Original strand, 9271148 - 9271371
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| | ||| |||||| |||||||||||||||||||||  |||    
T  9271148 atgaacatctttaaataagcaatgtgatctaggtttaaatagactagcgaactaaaatattaattagattaaaatctcttttgataatcaacatgagttt 9271247  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttga 214  Q
    ||| ||||||||||||||||||  ||| ||| |||||||| |||| ||||||||  |||||||||  |         |||||||||||||||| |||| |    
T  9271248 ttaggaaatttgactatatattgtatcgtatctcaattcttgtttttaataatacatttaaatataca----aataattaatgtatactaataggcttaa 9271343  T
Q  215 attattgaaaaagttaacaaatttttat 242  Q
    |||| |||||||||||||||||||||||    
T  9271344 attactgaaaaagttaacaaatttttat 9271371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 15 - 168
Target Start/End: Complemental strand, 32555856 - 32555703
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||| ||| |||||||||||||||||||||||| ||||    
T  32555856 atgaacatttttaaataagcaatgtgatctaagtttaaatagactagtgaacaaatatatcaattagatttaactctcttttgataatcaacatgaattt 32555757  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataata 168  Q
    ||| | ||||||||||||||||  |||| |||||||||||||||||||||||||    
T  32555756 ttagggaatttgactatatattgtatcagatttcaattctagtttataataata 32555703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 15 - 252
Target Start/End: Complemental strand, 18330903 - 18330670
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||||||||||||| ||||||||| ||||||||||||||  ||| ||| |||| |||| ||| |||| ||| |||||||||||||||||||  |||    
T  18330903 atgaacatctttaaataaacaatgtgatataagtttaaatagatcagccaaccaataaatcaattagattatactatcttttgataatcaacatgagttt 18330804  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttga 214  Q
    ||| | ||||||||||||||||  ||||||||||||||||||||||||||||||  |||| |||||           ||||||||||||||||| ||| |    
T  18330803 ttacggaatttgactatatattgtatcatatttcaattctagtttataataatacatttatatatg----cgaaaaattaatgtatactaataaccttaa 18330708  T
Q  215 attattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  18330707 attattgaaaaagttaacaaatttatattttaattcaa 18330670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 32420356 - 32420586
Alignment:
Q  18 aacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattttta 117  Q
    ||||| |||||||||||||||||||||||||||||| | |||||| ||||||||||||| ||  ||||||||||||||||||||||||||||   |||||    
T  32420356 aacatttttaaataagcaatgtgatctaagtttaaacaaactagcaaactaatatatcaattggattaaactctcttttgataatcaacatgagatttta 32420455  T
Q  118 agaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttgaatt 217  Q
     |||| |||||||||||||    |||||||||||||||||||||||||| |  |||||||||| |         ||||||||||||||||||||| ||||    
T  32420456 ggaaagttgactatatattgttccatatttcaattctagtttataataaaacatttaaatatgca----aaaaattaatgtatactaataagcttaaatt 32420551  T
Q  218 attgaaaaagttaacaaatttttatgttaattcaa 252  Q
    | |  |||||||||||||||||||| || ||||||    
T  32420552 actataaaagttaacaaatttttattttgattcaa 32420586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 15 - 252
Target Start/End: Complemental strand, 41015922 - 41015688
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||||||||  | ||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||| | ||||||||||| ||||||||  |||    
T  41015922 atgaacatctttag-tcagcaatgtgatctaagtttaaatagactaacgaactaatatatcaattaaattaatcactcttttgatattcaacatgagttt 41015824  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttga 214  Q
    ||   |||||||||||||||||  ||| |||||||||| ||||||| |||||||  ||||||||||||         |||||||||||||||||| || |    
T  41015823 ttggaaaatttgactatatattgtatcgtatttcaattatagtttacaataatacatttaaatatgaa--aaaaaaattaatgtatactaataagtttaa 41015726  T
Q  215 attattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    |||| | |||||||||||| |||||||| |||||||||    
T  41015725 attactaaaaaagttaacacatttttattttaattcaa 41015688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 16 - 252
Target Start/End: Complemental strand, 28032096 - 28031864
Alignment:
Q  16 tgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggatttt 115  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||| | || || ||||| | | | |||||||  |||||||||||||||||||  ||||    
T  28032096 tgaacatctttaaataagcaatgtgttctaagtttaaattgactatcaaattattatatgaatcagattaaacaatcttttgataatcaacatgagtttt 28031997  T
Q  116 taagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttgaa 215  Q
    || ||||||||||||||||||  ||||||||||||||||||||||||||||||  ||||||||| ||         |||||| |||||||||| ||| ||    
T  28031996 taggaaatttgactatatattgtatcatatttcaattctagtttataataatacatttaaatataaa----aaagattaatgcatactaataaacttaaa 28031901  T
Q  216 ttattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    ||| || |||| |||| |||||||||| |||||||||    
T  28031900 ttactggaaaacttaataaatttttattttaattcaa 28031864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 15 - 252
Target Start/End: Complemental strand, 40727257 - 40727024
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||  ||| ||| ||||||||||||||||||||||||||  ||  |    
T  40727257 atgaacatctttaaataagcaatgtgatctaagtttaaatggactaacgaactaatagttcaattaaattaaactctcttttgataatcaaca-cgaggt 40727159  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaat-aagcttg 213  Q
    ||| |||||| |||||| ||||  |||||||||| ||| |||||||||||||||  |||| ||||  |          |||||||||||||| ||||||     
T  40727158 ttaggaaattcgactatttattgtatcatatttctattttagtttataataatacatttatatattta----aaaaaataatgtatactaataaagctta 40727063  T
Q  214 aattattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    |||||||||||| ||| |||||||| ||| |||||||||    
T  40727062 aattattgaaaaggtttacaaatttatattttaattcaa 40727024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 15 - 133
Target Start/End: Original strand, 5034092 - 5034210
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||  ||||||||||||||||||||||||| |  |||    
T  5034092 atgaacatatttaaataagcaatgtgatcaaagtttaaatagactagcgaactaatagatcaattaggttaaactctcttttgataatcaacacgagttt 5034191  T
Q  115 ttaagaaatttgactatat 133  Q
    ||||  |||||||||||||    
T  5034192 ttaaagaatttgactatat 5034210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 15 - 168
Target Start/End: Complemental strand, 21144619 - 21144466
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||||||||||||   |||||||| |||||||||||||||||| ||||||||| |||| ||| |||||||||| |||||||| ||||||||   ||    
T  21144619 atgaacatctttaaatacttaatgtgatataagtttaaatagactagtgaactaatagatcaattagattaaactctattttgatagtcaacatgaggtt 21144520  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataata 168  Q
    | | | |||| |||||||||||  |||||||||||||| |||||||||||||||    
T  21144519 tcagggaattcgactatatattgtatcatatttcaattatagtttataataata 21144466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 15 - 252
Target Start/End: Complemental strand, 41937881 - 41937647
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||||||||||||| ||||| ||| |||||||||||||||||| || ||||||  ||| |||||||||||| | |||||||| |||||| ||  ||    
T  41937881 atgaacatctttaaataaacaatgcgatttaagtttaaatagactagagatctaatagttcaattatattaaactatattttgatagtcaacacgggatt 41937782  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaat-aagcttg 213  Q
    |||   |||| |||| ||||||  |||||||||  ||| |||||||||||||||  |||| ||||| |         ||||||||||||||| ||||||     
T  41937781 ttagagaattcgactgtatattgtatcatattttcattgtagtttataataatacatttatatatgca----ataaattaatgtatactaataaagctta 41937686  T
Q  214 aattattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    |||||||||||||||| |||||||| ||| |||||||||    
T  41937685 aattattgaaaaagtttacaaatttatattttaattcaa 41937647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 24 - 177
Target Start/End: Complemental strand, 34654015 - 34653861
Alignment:
Q  24 tttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatg-gatttttaagaaa 122  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||| | | |||||||||||||||| || | || | |   ||||||| |||    
T  34654015 tttaaataagtaatgtgatctaattttaaatagactagcgaactaatatatcaatgagattaaactctcttttgttacttaatacgatttttttaaaaaa 34653916  T
Q  123 tttgactatatatttgatcatatttcaattctagtttataataatatgtttaaat 177  Q
     |||||||||||||  ||||||||| || |||| |||||||| |||  |||||||    
T  34653915 cttgactatatattatatcatattttaactctaatttataatgataaatttaaat 34653861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 168
Target Start/End: Complemental strand, 42766704 - 42766552
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    ||||| ||||||||||||| ||  ||||||||| |||||||||||||||||||| ||||||| | | ||||| ||||| ||||||| | |||||| ||||    
T  42766704 atgaatatctttaaataagtaaattgatctaaggttaaatagactagcgaactattatatcaatgagattaatctctcctttgatatttaacatgaattt 42766605  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataata 168  Q
    ||||  |||||   ||||| ||  |||||||||||| |||||||||||||||||    
T  42766604 ttaaagaatttcgttatattttatatcatatttcaa-tctagtttataataata 42766552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 82 - 180
Target Start/End: Original strand, 18793709 - 18793807
Alignment:
Q  82 attaaactctcttttgataatcaacatggatttttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatg 180  Q
    ||||||||||||||||||| | |||||| |||||||   ||||||||||||||||  ||||||||||||||||||| ||||||||||  ||||||||||    
T  18793709 attaaactctcttttgatatttaacatgaatttttagagaatttgactatatattatatcatatttcaattctagtgtataataatacatttaaatatg 18793807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 49 - 249
Target Start/End: Complemental strand, 18879741 - 18879544
Alignment:
Q  49 ttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggatttttaagaaatttgactatatatttgatcatatttc 148  Q
    |||||| ||||| ||||||||||  ||| ||| ||||||||||| |||||||||||| |||   ||||| |||||| ||||||| |||  ||||||||||    
T  18879741 ttaaatggactaacgaactaatagttcaattaaattaaactctcctttgataatcaatatgaggttttaggaaattcgactataaattgtatcatatttc 18879642  T
Q  149 aattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaat-aagcttgaattattgaaaaagttaacaaatttttatgttaa 247  Q
     ||| || ||||||||||||  |||| ||||| |         ||||||||||||||| |||||| |||||||||||||||| |||||||| ||| ||||    
T  18879641 tattttaatttataataatacatttatatatgca----aaaatttaatgtatactaataaagcttaaattattgaaaaagtttacaaatttatattttaa 18879546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 17 - 180
Target Start/End: Complemental strand, 37155690 - 37155528
Alignment:
Q  17 gaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattttt 116  Q
    ||||||||||||||||| ||| ||||| ||| |||||||||||| ||| |||||| |||| | |||||||| ||||||| |||| | || ||| | ||||    
T  37155690 gaacatctttaaataagtaatatgatccaaggttaaatagactaacgagctaatagatca-tgatattaaattctctttcgatatttaatatgaagtttt 37155592  T
Q  117 a-agaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatg 180  Q
    | |||| ||| ||||||| ||  ||||||| ||||||||| |||||||||||| |||||||||||    
T  37155591 agagaacttt-actatatgttatatcatatctcaattctaatttataataatacgtttaaatatg 37155528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 70 - 252
Target Start/End: Original strand, 38175744 - 38175922
Alignment:
Q  70 tatatcagttatattaaactctcttttgataatcaacatggatttttaagaaatttgactatatatttgatcatatttcaattctagtttataataatat 169  Q
    ||||||| ||| |||||||| |||||||||||||||||||   |||||   |||||||||| |||||  ||||||||||||||||| ||||| ||||||     
T  38175744 tatatcaattagattaaactatcttttgataatcaacatgagcttttagagaatttgactacatattgtatcatatttcaattctactttatgataatac 38175843  T
Q  170 gtttaaatatgaagnnnnnnnnttaatgtatactaataagcttgaattattgaaaaagttaacaaatttttatgttaattcaa 252  Q
     |||| |||||           |||||||||||||||||| || ||||| | ||||||||||||||||| ||| |||||||||    
T  38175844 atttatatatg----tgaaatattaatgtatactaataagtttaaattaataaaaaagttaacaaatttatattttaattcaa 38175922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 180
Target Start/End: Original strand, 25072685 - 25072851
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaac-atggatt 113  Q
    ||||||||||||||||||| ||||||||  ||| |||||||||||| ||| |||||| |||| | |||||||||||||||| | || | ||| ||| | |    
T  25072685 atgaacatctttaaataagtaatgtgattcaaggttaaatagactaacgagctaatagatcaatgatattaaactctctttcggtatttaacaatgaagt 25072784  T
Q  114 ttta-agaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatg 180  Q
    |||| |||| ||| | ||||||||  ||||| ||||||||||| ||||||||||||  ||||||||||    
T  25072785 tttagagaacttt-attatatattatatcatctttcaattctaatttataataatacatttaaatatg 25072851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 168
Target Start/End: Complemental strand, 22166129 - 22165974
Alignment:
Q  18 aacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactc--tcttttgataatcaacatggatttt 115  Q
    |||||||||||||||  |||||||| ||||||| |||  |||| |||||||||| |||| ||| |||||||||  | |||| ||| | |||| | |||||    
T  22166129 aacatctttaaataaataatgtgatttaagttttaatcaactaacgaactaatagatcaattaaattaaactcattttttttatatttaacaagaatttt 22166030  T
Q  116 taaga-aatttgactatatat--ttgatcatatttcaattctagtttataataata 168  Q
    | ||| ||||||| |||||||  |  ||||||||||||||||||||||||||||||    
T  22166029 ttagagaatttgattatatattatatatcatatttcaattctagtttataataata 22165974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 168
Target Start/End: Complemental strand, 22224836 - 22224681
Alignment:
Q  18 aacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactc--tcttttgataatcaacatggatttt 115  Q
    |||||||||||||||  |||||||| ||||||| |||  |||| |||||||||| |||| ||| |||||||||  | |||| ||| | |||| | |||||    
T  22224836 aacatctttaaataaataatgtgatttaagttttaatcaactaacgaactaatagatcaattaaattaaactcattttttttatatttaacaagaatttt 22224737  T
Q  116 taaga-aatttgactatatat--ttgatcatatttcaattctagtttataataata 168  Q
    | ||| ||||||| |||||||  |  ||||||||||||||||||||||||||||||    
T  22224736 ttagagaatttgattatatattatatatcatatttcaattctagtttataataata 22224681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 39 - 179
Target Start/End: Complemental strand, 44736735 - 44736595
Alignment:
Q  39 tgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggatttttaagaaatttgactatatatttg 138  Q
    ||||||||| |||||||||| ||| || ||||| |||| |  |||||||||||||||||||| | |||||| | |||||  ||| || || |||||||      
T  44736735 tgatctaagattaaatagacgagcaaattaatagatcaatggtattaaactctcttttgatatttaacatgaaattttataaaactttaccatatattct 44736636  T
Q  139 atcatatttcaattctagtttataataatatgtttaaatat 179  Q
    |||||||||||||| |  ||||||||||||  |||||||||    
T  44736635 atcatatttcaattattatttataataatacatttaaatat 44736595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 25 - 179
Target Start/End: Original strand, 38566627 - 38566782
Alignment:
Q  25 ttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggatttttaagaaatt 124  Q
    ||||||||| | |||||||||| |||||||||| |  | |||||||| |||| | | ||||||||||||||||||| | |||||| ||||||    || |    
T  38566627 ttaaataagtattgtgatctaaatttaaatagattgtctaactaatagatcaatgagattaaactctcttttgatacttaacatgaatttttggagaact 38566726  T
Q  125 tgactatatatttgatcatatttcaa-ttctagtttataataatatgtttaaatat 179  Q
    |||||| |||||  |||||||||||| || |||||||||||| ||  |||||||||    
T  38566727 tgactacatattatatcatatttcaatttatagtttataatattacatttaaatat 38566782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 22 - 180
Target Start/End: Original strand, 32684236 - 32684396
Alignment:
Q  22 tctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattttt--aag 119  Q
    |||||||||||  |||||||||||| ||||||||||||| | | | |||| ||||   | ||||||||| ||||||||| | || |||  |||||  |      
T  32684236 tctttaaataaataatgtgatctaaatttaaatagactaacaagcaaatagatcaacgagattaaactcccttttgatattaaatatgattttttttaga 32684335  T
Q  120 aaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatg 180  Q
    ||||| |||||| ||||  ||||||||||||||||||||||||||| ||  ||||||||||    
T  32684336 aaattcgactatgtattctatcatatttcaattctagtttataatattacatttaaatatg 32684396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 24 - 168
Target Start/End: Complemental strand, 42809091 - 42808948
Alignment:
Q  24 tttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggatttttaagaaat 123  Q
    |||||||||| || |||||||||| |||||| ||||  ||||||| |||| || |   ||||| ||||||||||||| | |||||| ||||||||  |||    
T  42809091 tttaaataagtaaagtgatctaaggttaaattgactgacgaactattataccaatgggattaatctctcttttgatatttaacatgaatttttaaagaat 42808992  T
Q  124 ttgactatatatttgatcatatttcaattctagtttataataata 168  Q
    ||   ||||||||  |||||||||||| |||| ||||||||||||    
T  42808991 ttcgttatatattatatcatatttcaa-tctaatttataataata 42808948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 64 - 252
Target Start/End: Complemental strand, 28249065 - 28248880
Alignment:
Q  64 aactaatatatcagttatattaaactctcttttgataatcaacatggatttttaagaaatttgactatatatttgat--catatttcaattctagtttat 161  Q
    |||||||| |||| ||| |||||||||| |||||||| | ||||||  |||||||  || || ||||||||| | ||  |||| ||||||| ||||||||    
T  28249065 aactaatagatcaattagattaaactcttttttgatatttaacatgagtttttaaagaacttaactatatatattatagcatacttcaatt-tagtttat 28248967  T
Q  162 aataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttgaattattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    ||| |||  ||||||||||           ||||||||||||||||| ||| ||||| |||||| ||||||||||||  || |||||||||    
T  28248966 aatcatacatttaaatatg----tgaaagattaatgtatactaataaacttaaattactgaaaaggttaacaaatttaaattttaattcaa 28248880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 284 - 333
Target Start/End: Original strand, 29707013 - 29707062
Alignment:
Q  284 ttattcatatttacttcaatatgccgacctaatatgcctaggaggctttt 333  Q
    |||||||||||||||| |||| |||||||||||| ||||| |||||||||    
T  29707013 ttattcatatttacttaaataggccgacctaataggcctaagaggctttt 29707062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 252
Target Start/End: Complemental strand, 32555693 - 32555646
Alignment:
Q  205 ataagcttgaattattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    |||||||||||||| ||||| |||||||| |||||||| |||||||||    
T  32555693 ataagcttgaattactgaaacagttaacatatttttattttaattcaa 32555646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 238
Target Start/End: Complemental strand, 40303373 - 40303336
Alignment:
Q  201 actaataagcttgaattattgaaaaagttaacaaattt 238  Q
    ||||||| | ||||||||||||||||||||||||||||    
T  40303373 actaatatgtttgaattattgaaaaagttaacaaattt 40303336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 182
Target Start/End: Original strand, 30225782 - 30225822
Alignment:
Q  142 atatttcaattctagtttataataatatgtttaaatatgaa 182  Q
    |||||||||||||| ||||||||||||  ||||||||||||    
T  30225782 atatttcaattctaatttataataataaatttaaatatgaa 30225822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 37034432 - 37034484
Alignment:
Q  129 tatatatttgatcatatttcaattctagtttataataatatgtttaaatatga 181  Q
    ||||||||  |||| |||||||||||||||| ||||||||  |||||||||||    
T  37034432 tatatattatatcaaatttcaattctagtttgtaataatacatttaaatatga 37034484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 5e-57; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 24 - 252
Target Start/End: Complemental strand, 19298177 - 19297953
Alignment:
Q  24 tttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggatttttaagaaat 123  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||||  || ||||||||||||||||||||||||||||  |||||| |||||    
T  19298177 tttaaataagcaatgtgatctaagtttaaatagactacctaactaatatatcaactagattaaactctcttttgataatcaacatgagtttttaggaaat 19298078  T
Q  124 ttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttgaattattgaa 223  Q
    |||||||||||||    ||||||||||||||||||||||||||||  |||| ||||| |         ||||||||||||||||||||| ||||| ||||    
T  19298077 ttgactatatattgttccatatttcaattctagtttataataatacatttatatatgca----aaaagttaatgtatactaataagcttaaattactgaa 19297982  T
Q  224 aaagttaacaaatttttatgttaattcaa 252  Q
    ||||| |||||| |||||| |||||||||    
T  19297981 aaagtcaacaaacttttattttaattcaa 19297953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 18 - 168
Target Start/End: Original strand, 42108520 - 42108670
Alignment:
Q  18 aacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattttta 117  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||    
T  42108520 aacatctttaaataagcaatatgatccaagtttaaatagactagcgaactaatatatcaattagattaaactctcttttgataatcaacatgaattttta 42108619  T
Q  118 agaaatttgactatatatttgatcatatttcaattctagtttataataata 168  Q
     | ||||||||||||||||  |||| |||||||||||||||||||||||||    
T  42108620 gggaatttgactatatattgtatcagatttcaattctagtttataataata 42108670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 15 - 252
Target Start/End: Complemental strand, 6391567 - 6391335
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||| ||  |||    
T  6391567 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcaattagattaaactctattttgataatcaacttgagttt 6391468  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttga 214  Q
    ||| | || |||||||||||||  |||||||||||||||||||||||| |||||  |||||||||  |         |||||| ||| |||||||||| |    
T  6391467 ttagggaa-ttgactatatattgtatcatatttcaattctagtttatagtaatacatttaaatataca----aaaaattaatgcatattaataagcttaa 6391373  T
Q  215 attattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    |||| ||||||||||||| ||| ||||| |||||||||    
T  6391372 attactgaaaaagttaacgaatgtttattttaattcaa 6391335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 15 - 252
Target Start/End: Complemental strand, 11422741 - 11422506
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||| |||||||||||| ||||||||||||||||||||| ||||||| | |||||||| ||| |||||||| |||||||||||||||||||  |||    
T  11422741 atgaacatttttaaataagcattgtgatctaagtttaaatagattagcgaatttatatatcaattagattaaactatcttttgataatcaacatgagttt 11422642  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttga 214  Q
    ||| ||||||||| ||||||||  |||||||||||||||| ||||||||||||| ||||||||||| |          ||||| |||||||||| ||| |    
T  11422641 ttaggaaatttgaatatatattgtatcatatttcaattcttgtttataataatacgtttaaatatgca--aaaaaaactaatgcatactaataaacttaa 11422544  T
Q  215 attattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    |||| | ||||||||||||||||||||| |||||||||    
T  11422543 attactcaaaaagttaacaaatttttattttaattcaa 11422506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 40201950 - 40201718
Alignment:
Q  18 aacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattttta 117  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||| |||||||||||||||||||| ||   | ||||    
T  40201950 aacatcttttaataagcaatgtgatctaagtttaaatagactagcaaactaatatatcaattagattgaactctcttttgataatcaagataagtcttta 40201851  T
Q  118 agaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttgaatt 217  Q
     | ||||||||||||||||  ||||||||||||||||||||||||||||||  |||||||||  |          |||||||||||||||||||| ||||    
T  40201850 gggaatttgactatatattgtatcatatttcaattctagtttataataatacatttaaatattca--aaaaataataatgtatactaataagcttaaatt 40201753  T
Q  218 attgaaaaagttaacaaatttttatgttaattcaa 252  Q
    |  ||||||||||||||| |||||| |||||||||    
T  40201752 accgaaaaagttaacaaacttttattttaattcaa 40201718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 15 - 179
Target Start/End: Complemental strand, 41387053 - 41386889
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    ||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||| |||  |||    
T  41387053 atgaacatctttatataagcaaagtgatataagtttaaatagactagcgaactaatatatcaattagatcaaactctcttttgataatcaatatgagttt 41386954  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatat 179  Q
    ||||  ||||||||||| ||||  |||||||||||| |||||||||||||||||| |||||||||    
T  41386953 ttaatgaatttgactatgtattgtatcatatttcaagtctagtttataataatatatttaaatat 41386889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 18 - 180
Target Start/End: Original strand, 36439917 - 36440079
Alignment:
Q  18 aacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattttta 117  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||  || ||||||||||||||||||||||||||||  ||||||    
T  36439917 aacatctttaaataagcaatgttatctaagtttaaatagactaacgaactaatatatcaaatagattaaactctcttttgataatcaacatgacttttta 36440016  T
Q  118 agaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatg 180  Q
       ||||||| ||||||||  ||||||||||||||||| ||||||||||||  ||||||||||    
T  36440017 gagaatttgattatatattgtatcatatttcaattctactttataataatacatttaaatatg 36440079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 17 - 252
Target Start/End: Original strand, 32906822 - 32907052
Alignment:
Q  17 gaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattttt 116  Q
    |||||||||||||||| ||||||||| ||||||||||||| ||||||||||| || |||| ||  |||||||| ||||||||||||| |||||  |||||    
T  32906822 gaacatctttaaataaacaatgtgatataagtttaaataggctagcgaacta-tagatcaatttaattaaactatcttttgataatcgacatgagttttt 32906920  T
Q  117 aagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttgaat 216  Q
    | | ||||||||||||||||  ||||||||||||||||||||||||||||||  |||  |||||           ||||||||||||||||| ||| |||    
T  32906921 acggaatttgactatatattgtatcatatttcaattctagtttataataatacatttttatatg----cgaaaaattaatgtatactaataaacttaaat 32907016  T
Q  217 tattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    |||||||||||||||||||||| ||| |||||||||    
T  32907017 tattgaaaaagttaacaaatttatattttaattcaa 32907052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 15 - 179
Target Start/End: Original strand, 38876623 - 38876788
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatat-atcagttatattaaactctcttttgataatcaacatggatt 113  Q
    |||||||||||||||||| ||||| ||||||||||||||||||| ||| ||||||||| |||| ||| |||||||||| |||||||||||||||||  ||    
T  38876623 atgaacatctttaaataaacaatgagatctaagtttaaatagaccagcaaactaatattatcaattagattaaactcttttttgataatcaacatgagtt 38876722  T
Q  114 tttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatat 179  Q
    ||||  |||||||||||||||||  ||||||||||||||||||||||||||||||  |||||||||    
T  38876723 tttagaaaatttgactatatattgtatcatatttcaattctagtttataataatacatttaaatat 38876788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 15 - 168
Target Start/End: Complemental strand, 12580235 - 12580082
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||| ||| |||||||||||||||||||||||||| | | ||    
T  12580235 atgaacatctttaaataagcaatgtgatctaagtttaaatggactagcgaactaatagttcaattagattaaactctcttttgataatcaacacgaagtt 12580136  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataata 168  Q
    ||| | | || |||||||||||  |||||||||  |||||||||||||||||||    
T  12580135 ttagggagttcgactatatattgtatcatatttttattctagtttataataata 12580082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 35319295 - 35319450
Alignment:
Q  13 agatgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggat 112  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||| ||||||||||||||||||||| ||    
T  35319295 agataaacatatttaaataagcaatgtgatctaagtttaaatagactagggaactaatatatcaattagattaaagtctcttttgataatcaacatgaat 35319394  T
Q  113 ttttaagaaatttgactatatatttgatcatatttcaattctagtttataataata 168  Q
    ||| | |  ||||| |||| ||||  |||| |||||||||||| ||||||||||||    
T  35319395 tttcagggtatttggctatttattgtatcagatttcaattctactttataataata 35319450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 15 - 252
Target Start/End: Original strand, 40514765 - 40515001
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatct--aagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggat 112  Q
    |||||||||||||||||| ||||||||| |  ||||||||||| ||||||||| |||||||||| ||| ||||||||||||| |||||||||||||   |    
T  40514765 atgaacatctttaaataaacaatgtgatatttaagtttaaatatactagcgaagtaatatatcaattagattaaactctcttatgataatcaacatcagt 40514864  T
Q  113 ttttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagctt 212  Q
    ||||| | || |||||||||||||  | ||||||||||||||||||||||||||||  |||||||||| |         |||||||| ||||| ||||||    
T  40514865 ttttagggaagttgactatatattgtaccatatttcaattctagtttataataatacatttaaatatgca----aaaaattaatgtacactaacaagctt 40514960  T
Q  213 gaattattgaaa-aagttaacaaatttttatgttaattcaa 252  Q
     ||||  | ||| |||||||||||||||||| |||||||||    
T  40514961 aaatttctaaaacaagttaacaaatttttattttaattcaa 40515001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 15 - 242
Target Start/End: Complemental strand, 40417467 - 40417239
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatat-taaactctcttttgataatcaacatggatt 113  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||| ||  |||||| ||||  ||||||||||||  ||    
T  40417467 atgaacatctttaaataagcaatgtgatcgaagtttaaatagactagtgaactaatatatcaattagataaaaactcgctttatataatcaacatgagtt 40417368  T
Q  114 tttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttg 213  Q
    |||||  ||||| |||| |||||  ||||||||| ||||||||||||||||||||  || ||||||| |          |||||||| |||||||||||     
T  40417367 tttaaataatttaactaaatattgtatcatattttaattctagtttataataatactttaaaatatgcaaaaaataaaataatgtatgctaataagctta 40417268  T
Q  214 aattattgaaaaagttaacaaatttttat 242  Q
    ||||| || ||||||||| ||||||||||    
T  40417267 aattactgtaaaagttaataaatttttat 40417239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 15 - 252
Target Start/End: Original strand, 16885449 - 16885683
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    ||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||  ||| ||| ||||||||||||||||||||||||||     ||    
T  16885449 atgaacatctttaaataagcaatgtaatctaagtttaaatggaccagcgaactaatagttcaattagattaaactctcttttgataatcaacacaaggtt 16885548  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaat-aagcttg 213  Q
    |||   ||||||||||||||||  |||||||||| |||||||||||||||||||  |||| ||||| |         |||||||| | |||| ||||||     
T  16885549 ttagagaatttgactatatattgtatcatatttctattctagtttataataatacatttatatatgca----aaaaattaatgtaaattaataaagctta 16885644  T
Q  214 aattattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    ||| |||||||||||| |||||||| ||| |||||||||    
T  16885645 aataattgaaaaagtttacaaatttatattttaattcaa 16885683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 15 - 168
Target Start/End: Original strand, 15530086 - 15530239
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||||||||||||| ||||||||||||| ||||||| |||| |||||||||||  ||| ||| |||||||||||||||||||||||||| |   ||    
T  15530086 atgaacatctttaaataaacaatgtgatctaaatttaaatggactggcgaactaatagttcaattagattaaactctcttttgataatcaacacgatgtt 15530185  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataata 168  Q
    ||| | |||| |||||||||||  |||||||||| |||||||||||||||||||    
T  15530186 ttagggaattcgactatatattgtatcatatttctattctagtttataataata 15530239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 15 - 168
Target Start/End: Complemental strand, 28207439 - 28207286
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||  ||| ||| |||||||||||||||||||||||||| |   ||    
T  28207439 atgaacatttttaaataagcaatgtgatctaagtttaaatggactagcgaactaatagttcaattaaattaaactctcttttgataatcaacacgaggtt 28207340  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataata 168  Q
    ||| | |||| ||  |||||||  |||||||||| |||||||||||||||||||    
T  28207339 ttagggaattcgaaaatatattgtatcatatttctattctagtttataataata 28207286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 15 - 252
Target Start/End: Original strand, 14830594 - 14830828
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||||||||| |||||||| |||||||||||||||| ||||||| ||||||||  ||| ||  ||||||||||||||| |||||||| | |   ||    
T  14830594 atgaacatctttaagtaagcaatatgatctaagtttaaatggactagcaaactaatagttcaattggattaaactctcttttaataatcaatacgaggtt 14830693  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaat-aagcttg 213  Q
    ||| | |||| |||||||||||  |||||||||| |||||||||||||||||||  |||| ||||| |         ||||||||||||||| |||| |     
T  14830694 ttagggaattcgactatatattgtatcatatttctattctagtttataataatacatttatatatgca----aaaaattaatgtatactaataaagcata 14830789  T
Q  214 aattattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    |||||||||||||||| |||||||| ||| |||||||||    
T  14830790 aattattgaaaaagtttacaaatttatattttaattcaa 14830828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 15 - 165
Target Start/End: Complemental strand, 16844633 - 16844483
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||  ||| ||| |||||||||| |||||||||||||||||   ||    
T  16844633 atgaacatctttaaataagaaatgtgatctaagtttaaatggactagcgaactaatagttcaattagattaaactctattttgataatcaacatgagatt 16844534  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataata 165  Q
    ||| | | || |||||||||||  |||||||||| ||||||| ||||||||    
T  16844533 ttagggagttcgactatatattgtatcatatttctattctaggttataata 16844483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 15 - 179
Target Start/End: Original strand, 39981618 - 39981783
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatat-taaactctcttttgataatcaacatggatt 113  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||| ||  |||||| ||||  ||||||||||||  ||    
T  39981618 atgaacatatttaaataagcaatgtgatcgaagtttaaatagactagtgaactaatatatcaattagataaaaactcgctttatataatcaacatgagtt 39981717  T
Q  114 tttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatat 179  Q
    |||||  ||||| |||| |||||  ||||||||| |||||||||||||||||||| ||| ||||||    
T  39981718 tttaaataatttaactaaatattgtatcatattttaattctagtttataataatacgttgaaatat 39981783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 8570352 - 8570185
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttg--ataatcaacatggat 112  Q
    |||||| | |||||||||| |||||||||||| ||||||||||||| | ||||||||||||| ||| |||||||| | ||||   ||||||||||||  |    
T  8570352 atgaacgtatttaaataagtaatgtgatctaaatttaaatagactaacaaactaatatatcaattagattaaacttttttttttcataatcaacatgagt 8570253  T
Q  113 ttttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatg 180  Q
    ||||| | ||||||||||||||||  ||||||||||||||| ||||||||||||||  ||||||||||    
T  8570252 ttttagggaatttgactatatattgtatcatatttcaattcaagtttataataatacatttaaatatg 8570185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 168
Target Start/End: Original strand, 28022739 - 28022892
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||  ||||  || ||||||||||||||| ||||| ||||||  |||    
T  28022739 atgaacatctttaaataagcaatgtgatctaagttaaaatagattagcgaactaattgatcaactagattaaactctctttttataataaacatgagttt 28022838  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataata 168  Q
    |||  |||||| | |||| |||  ||||||||||| || || ||||||||||||    
T  28022839 ttagaaaattttattataaattgtatcatatttcagttttaatttataataata 28022892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 22859780 - 22859615
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    ||||||||||||||||||| || |||||| ||| ||||| |||||| ||| |||||| |||| | ||||||||||||||||||||| | || ||| | ||    
T  22859780 atgaacatctttaaataagtaaggtgatccaaggttaaaaagactaacgagctaatagatcaatgatattaaactctcttttgatatttaatatgaagtt 22859681  T
Q  115 tta-agaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatg 180  Q
    ||| |||| ||| ||||||||||  ||||||||||||||||| ||||||||||||  ||||||||||    
T  22859680 ttagagaacttt-actatatattatatcatatttcaattctaatttataataatagttttaaatatg 22859615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 23 - 168
Target Start/End: Original strand, 333700 - 333845
Alignment:
Q  23 ctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggatttttaagaaa 122  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||  ||| ||| |||||||||||||||||||||||||| |   ||||| | |     
T  333700 ctttaaataagcaatgtgatctaaatttaaatggactagcgaactaatagttcaattagattaaactctcttttgataatcaacacgaggttttagggag 333799  T
Q  123 tttgactatatatttgatcatatttcaattctagtttataataata 168  Q
    ||||||||||||||  | | |||||  |||||||||||| ||||||    
T  333800 tttgactatatattgcaccttatttatattctagtttatgataata 333845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 17743022 - 17742919
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    ||||| ||||||  |||||||||||||| ||||||| ||||||||||| ||||||||||||| ||| ||||||||||||||| |||||||| |||  |||    
T  17743022 atgaatatcttttgataagcaatgtgatttaagtttcaatagactagcaaactaatatatcaattagattaaactctcttttaataatcaagatgagttt 17742923  T
Q  115 ttaa 118  Q
    ||||    
T  17742922 ttaa 17742919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 168
Target Start/End: Original strand, 8689105 - 8689257
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    ||||||||||||||||| | |||||||| ||||||||||||||||| | || ||||| || | | | || ||||| |||||| ||| | |||||| ||||    
T  8689105 atgaacatctttaaatatgtaatgtgatataagtttaaatagactatcaaattaatagatgaataagataaaactttcttttaatatttaacatgaattt 8689204  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataata 168  Q
    |  || |||||||||||||| |  |||| |||||||||||| ||||||||||||    
T  8689205 tagag-aatttgactatataatgtatcaaatttcaattctaatttataataata 8689257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 39963935 - 39964022
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatca 104  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||| |||||||||| ||||  || ||||||  |||||||||||||||    
T  39963935 atgaacatctttaaataagtaatataatctaagtttaaatagactaacgaactaataaatcaactagattaaa--ctcttttgataatca 39964022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 2823615 - 2823530
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgata 100  Q
    ||||||||  ||||||||| |||||||| |||| ||||||| |||| |||||||||  |||| | |||||||||||||||||||||    
T  2823615 atgaacattattaaataagtaatgtgatataaggttaaataaactaacgaactaatggatcaatgatattaaactctcttttgata 2823530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 155
Target Start/End: Original strand, 15577829 - 15577970
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaact-ctcttttgataatcaacatggatt 113  Q
    |||||||| |||||||| | |||||||||||||||||| ||| ||||  ||||||||  |||   | |||||||| || |||| ||| | |||||| |||    
T  15577829 atgaacatttttaaataggtaatgtgatctaagtttaattagtctagttaactaataactcaacaagattaaactcctttttttatatttaacatgaatt 15577928  T
Q  114 tttaagaaatttgactatatatttgatcatatttcaattcta 155  Q
    ||||   ||||||||||||||||  |||||||||||||||||    
T  15577929 tttagagaatttgactatatattatatcatatttcaattcta 15577970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 39 - 179
Target Start/End: Original strand, 25606228 - 25606369
Alignment:
Q  39 tgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggatttttaaga-aatttgactatatattt 137  Q
    ||||| |||| |||||||| |||| ||||||||  |||   | || |||||||||||||||| | |||||| || ||| ||| ||||||||||||||||     
T  25606228 tgatccaagtataaatagaatagcaaactaataattcaacgaaatcaaactctcttttgatatttaacatgaatattttagataatttgactatatatta 25606327  T
Q  138 gatcatatttcaattctagtttataataatatgtttaaatat 179  Q
     |||| | ||||||||||||||||||||| |  |||||||||    
T  25606328 tatcacaattcaattctagtttataataacacttttaaatat 25606369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 82 - 178
Target Start/End: Original strand, 29571153 - 29571248
Alignment:
Q  82 attaaactctcttttgataatcaacatggatttttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaata 178  Q
    ||||||||||||||||||||| |  ||| | ||||| | ||||| ||||||||||  |||||||||||||| |||||||||||||||  ||||||||    
T  29571153 attaaactctcttttgataattaggatg-agttttagggaatttaactatatattgtatcatatttcaattgtagtttataataatacatttaaata 29571248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 82 - 160
Target Start/End: Original strand, 10623605 - 10623683
Alignment:
Q  82 attaaactctcttttgataatcaacatggatttttaagaaatttgactatatatttgatcatatttcaattctagttta 160  Q
    |||||||||||||||||||||||||| |   ||||| |||||| |||||||||||  |||||||||| |||||| ||||    
T  10623605 attaaactctcttttgataatcaacacgagattttaggaaattcgactatatattgtatcatatttctattctaattta 10623683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 15 - 168
Target Start/End: Original strand, 10918314 - 10918467
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||| |||||||||  ||||||||  ||| ||||| ||||||  || |||||| |||| | |||||||||||||||| |||| | |||||  | ||    
T  10918314 atgaacatatttaaataaataatgtgattcaaggttaaaaagactaatgagctaataaatcaataatattaaactctctttcgatatttaacataaagtt 10918413  T
Q  115 tta-agaaatttgactatatatttgatcatatttcaattctagtttataataata 168  Q
    ||| |||| ||| ||||||||||  ||||||||  ||||||| ||||||||||||    
T  10918414 ttagagaacttt-actatatattatatcatattataattctaatttataataata 10918467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 18988613 - 18988695
Alignment:
Q  98 ataatcaacatggatttttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatg 180  Q
    ||||| ||||||||||||||   || |||| ||||||||  ||||||||||||||||| | ||||||||||| ||||||||||    
T  18988613 ataattaacatggatttttagagaacttgattatatattatatcatatttcaattctaatctataataatatatttaaatatg 18988695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 252
Target Start/End: Original strand, 11873629 - 11873688
Alignment:
Q  192 ttaatgtatactaataagcttgaattattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    |||||||||||||||||| || |||||| ||||||||||||||||||||||  ||||||||    
T  11873629 ttaatgtatactaataagtttaaattat-gaaaaagttaacaaatttttattctaattcaa 11873688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 180
Target Start/End: Complemental strand, 18731207 - 18731070
Alignment:
Q  41 atctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggatttttaagaaatttgactatatatttgat 140  Q
    ||||||| ||||||||| ||| ||||||||| |||| | |||||||||| |  ||||||| | |||| | | |||||   ||||| |||||||| |  ||    
T  18731207 atctaagcttaaatagattagtgaactaatagatcaatgatattaaacttt--tttgatatttaacacgaagttttagagaattttactatataatatat 18731110  T
Q  141 catatttcaattctagtttataataatatgtttaaatatg 180  Q
    ||||||||||||||  ||||||||||||  ||||||||||    
T  18731109 catatttcaattcttatttataataatacatttaaatatg 18731070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 29571095 - 29571143
Alignment:
Q  48 tttaaatagactagcgaactaatatatcagttatattaaactctctttt 96  Q
    ||||||||||||||||||||||||||||| ||| |||||||||| ||||    
T  29571095 tttaaatagactagcgaactaatatatcaattagattaaactctttttt 29571143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 35412360 - 35412420
Alignment:
Q  16 tgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatca 76  Q
    |||||||||||||||||| ||| |||||||||||| | |||||||| ||||||||| ||||    
T  35412360 tgaacatctttaaataagtaatatgatctaagtttgagtagactagtgaactaataaatca 35412420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 249
Target Start/End: Complemental strand, 41873155 - 41873097
Alignment:
Q  192 ttaatgtatactaataa-gcttgaattattgaaaaagttaacaaatttttatgttaatt 249  Q
    ||||||||||||||||| |||| ||||| ||||||||||||||||||| ||| ||||||    
T  41873155 ttaatgtatactaataaagcttaaattagtgaaaaagttaacaaatttatattttaatt 41873097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 192 - 252
Target Start/End: Original strand, 333887 - 333948
Alignment:
Q  192 ttaatgtatactaataag-cttgaattattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    |||||||||||||||||  ||| |||||||||||||||| |||||||| ||| |||||||||    
T  333887 ttaatgtatactaataaaacttaaattattgaaaaagtttacaaatttatattttaattcaa 333948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 12580038 - 12579977
Alignment:
Q  192 ttaatgtatactaat-aagcttgaattattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    ||||||||||||||| |||||| ||||| |||||||||| |||||||| ||| |||||||||    
T  12580038 ttaatgtatactaataaagcttaaattagtgaaaaagtttacaaatttatattttaattcaa 12579977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 252
Target Start/End: Complemental strand, 8570168 - 8570112
Alignment:
Q  196 tgtatactaataagcttgaattattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    |||| |||||||| ||| ||||| | ||||||||||||||||||||| |||||||||    
T  8570168 tgtacactaataaacttaaattactaaaaaagttaacaaatttttattttaattcaa 8570112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 252
Target Start/End: Original strand, 39964087 - 39964147
Alignment:
Q  192 ttaatgtatactaataagcttgaattattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    |||||||||||| |||||||||||||  | |||||||||| |||||| ||| |||||||||    
T  39964087 ttaatgtatacttataagcttgaattgctaaaaaagttaataaatttatattttaattcaa 39964147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 22658377 - 22658432
Alignment:
Q  21 atctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatca 76  Q
    ||||||||||||| ||| | || ||| ||||||||||||| |||||||||||||||    
T  22658377 atctttaaataagaaatataatataaatttaaatagactatcgaactaatatatca 22658432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 109
Target Start/End: Complemental strand, 4386068 - 4385974
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatg 109  Q
    |||||||| ||||| |||  ||| ||||||||||||||||| | |||  |||||||| |||| | |||||||||||| | |||||| | ||||||    
T  4386068 atgaacatttttaattaaataatatgatctaagtttaaataaaatagtaaactaatagatcaatgatattaaactctttcttgatatttaacatg 4385974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 11789763 - 11789717
Alignment:
Q  192 ttaatgtatactaataagcttgaattattgaaaaagttaacaaattt 238  Q
    |||||||||||||||||| || || ||||||||| ||||||||||||    
T  11789763 ttaatgtatactaataagtttaaactattgaaaaggttaacaaattt 11789717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 252
Target Start/End: Original strand, 36440123 - 36440155
Alignment:
Q  220 tgaaaaagttaacaaatttttatgttaattcaa 252  Q
    ||||||||||||||||||||||| |||||||||    
T  36440123 tgaaaaagttaacaaatttttattttaattcaa 36440155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 110; Significance: 3e-55; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 15 - 252
Target Start/End: Original strand, 10667562 - 10667796
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    ||||||||||||  ||||| |||||||||||||||||||||||||||| |||| ||| |||| ||| | ||||||||||||||||| |||||||| ||||    
T  10667562 atgaacatctttgtataagtaatgtgatctaagtttaaatagactagcaaactcatagatcaattagaataaactctcttttgatattcaacatgaattt 10667661  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttga 214  Q
    ||| ||||||||||||||||||  | ||||||||||||||||||||||| ||||  |||||||||| |         ||||||||||||||||||||| |    
T  10667662 ttaggaaatttgactatatattgtaccatatttcaattctagtttataacaatacatttaaatatgca---aaaaaattaatgtatactaataagcttaa 10667758  T
Q  215 attattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    |||| |||||| ||| |||||||||||| |||||||||    
T  10667759 attactgaaaaggttgacaaatttttattttaattcaa 10667796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 24556737 - 24556571
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaa-gtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggatt 113  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||| ||| |||||||||||||||||||||||||| |   |    
T  24556737 atgaacatctttaaataagcaatgtgatctaaagtttaaatagactagcgaactaatagttcaattagattaaactctcttttgataatcaacacgaggt 24556638  T
Q  114 tttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatg 180  Q
    |||| | |||| |||||||||||  |||||||||||||| ||||||||||||||| ||||| |||||    
T  24556637 tttagggaattcgactatatattgtatcatatttcaattttagtttataataatacgtttatatatg 24556571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 18 - 259
Target Start/End: Complemental strand, 6248923 - 6248686
Alignment:
Q  18 aacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattttta 117  Q
    ||||| ||||||||||||||||  |||||||||||||||||| ||||| |||||||||||||| |||||||||| |||||||||||||||||   |||||    
T  6248923 aacatatttaaataagcaatgttgtctaagtttaaatagactggcgaattaatatatcagttagattaaactctattttgataatcaacatgaggtttta 6248824  T
Q  118 agaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttgaatt 217  Q
       |||||||| |||| ||  |||||||||||||||||||| |||||||||  |||| | ||| |         ||||||||||||||||||||| ||||    
T  6248823 gagaatttgacaatatcttgtatcatatttcaattctagttcataataatacatttataaatgca----aaaaattaatgtatactaataagcttaaatt 6248728  T
Q  218 attgaaaaagttaacaaatttttatgttaattcaaggtgcaa 259  Q
    | |||||||| |||||||||| ||| ||||||||| ||||||    
T  6248727 actgaaaaagataacaaatttatattttaattcaaagtgcaa 6248686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 15 - 168
Target Start/End: Complemental strand, 9952871 - 9952718
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||||||||||||| |||||||||||| |||||||| ||||| ||||||||||  ||| ||| |||||||||||||||||||||||||| |   ||    
T  9952871 atgaacatctttaaataaacaatgtgatctacgtttaaatggactaccgaactaatagttcaattagattaaactctcttttgataatcaacacgagatt 9952772  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataata 168  Q
    ||| |||||| |||||||||||  || |||||||||||||||||||||||||||    
T  9952771 ttaggaaattcgactatatattgcataatatttcaattctagtttataataata 9952718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 24 - 168
Target Start/End: Complemental strand, 26244403 - 26244259
Alignment:
Q  24 tttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggatttttaagaaat 123  Q
    ||||||||||||||||||||||||||| |||||| ||| ||||||||| |||| ||| |||||||| ||||||||||||||||||   |||||| | |||    
T  26244403 tttaaataagcaatgtgatctaagtttcaatagattagtgaactaataaatcaattagattaaactatcttttgataatcaacattagtttttacggaat 26244304  T
Q  124 ttgactatatatttgatcatatttcaattctagtttataataata 168  Q
    |||||||||||||  |||||||||||||| |||||||||||||||    
T  26244303 ttgactatatattgtatcatatttcaattttagtttataataata 26244259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 33 - 252
Target Start/End: Original strand, 33248077 - 33248292
Alignment:
Q  33 gcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggatttttaagaaatttgactata 132  Q
    ||||||| |||||||| ||||||||||| | |||||| |||||| ||| ||||||||||||||||||||| ||||||  |||||||||||||||| ||||    
T  33248077 gcaatgttatctaagtgtaaatagactaacaaactaagatatcaattaaattaaactctcttttgataattaacatgagtttttaagaaatttgattata 33248176  T
Q  133 tatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttgaattattgaaaaagttaac 232  Q
    ||||  ||||||||||| |||||||||||| |||||  |||||||||| |         ||||| ||||||||||||||| ||||| | |||||||||||    
T  33248177 tattgtatcatatttcagttctagtttatactaatacatttaaatatgca----aaaaattaatttatactaataagcttaaattactaaaaaagttaac 33248272  T
Q  233 aaatttttatgttaattcaa 252  Q
    |  | ||||| |||||||||    
T  33248273 acgtatttattttaattcaa 33248292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 15 - 233
Target Start/End: Original strand, 13640801 - 13641014
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    ||||||||| |||||||||||||||||| ||||||| ||||||||||| |||||||| |||| ||| |||||||||| |||||||||| ||||||   ||    
T  13640801 atgaacatcattaaataagcaatgtgatataagttttaatagactagctaactaataaatcaattaaattaaactct-ttttgataattaacatgaggtt 13640899  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttga 214  Q
    ||| | |||||||| |||| ||  ||||||||||||||||||||||||||||||  |||| ||||| |         ||||||||||||||||||||| |    
T  13640900 ttagggaatttgacaatatgttgtatcatatttcaattctagtttataataatacatttatatatgta----aaaaattaatgtatactaataagcttaa 13640995  T
Q  215 attattgaaaaagttaaca 233  Q
    ||||   ||||||||||||    
T  13640996 attacataaaaagttaaca 13641014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 15 - 168
Target Start/End: Complemental strand, 24073675 - 24073523
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||||||| |||||||||||||||||  ||| |||||||||||| ||| ||||||||| ||| |||||| ||||||||||||||||| ||   | |    
T  24073675 atgaacatcttttaataagcaatgtgatctgggtt-aaatagactagcaaaccaatatatcaattagattaaattctcttttgataatcaagataagtat 24073577  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataata 168  Q
    ||| | ||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  24073576 ttagggaatttgactatatattgtatcatattttaattctagtttataataata 24073523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 180
Target Start/End: Original strand, 33614532 - 33614694
Alignment:
Q  18 aacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattttta 117  Q
    ||||| ||||||||   ||||| || ||||||||||||||  | ||||||||||||||| | | ||| ||||||||||||||| | |||||| |||||||    
T  33614532 aacatatttaaatatataatgtaatataagtttaaatagatcaacgaactaatatatcaatgagattgaactctcttttgatatttaacatgaattttta 33614631  T
Q  118 agaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatg 180  Q
      |||  ||||||| ||||  |||||||||||||| |||||||||||||||| ||||||||||    
T  33614632 gaaaacatgactatttattaaatcatatttcaattttagtttataataatatatttaaatatg 33614694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 15 - 252
Target Start/End: Complemental strand, 5331325 - 5331092
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    ||||| ||||||||||||||||||||| |||||||||||| ||||| ||||||||||  | | ||| |||||| ||| |||| || |||||||     ||    
T  5331325 atgaatatctttaaataagcaatgtgacctaagtttaaatggactaacgaactaatagtttaattagattaaattcttttttaat-atcaacacaaggtt 5331227  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaat-aagcttg 213  Q
    ||| ||||||  ||||||||||  |||||||||| ||||||| || ||||||||  |||| ||||| |         ||||||||||||||| |||||||    
T  5331226 ttaggaaattcaactatatattgtatcatatttctattctagcttctaataatacatttatatatgca----aaaaattaatgtatactaataaagcttg 5331131  T
Q  214 aattattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    | |||| ||||||||| |||| ||| ||| |||||||||    
T  5331130 agttatagaaaaagtttacaagtttatattttaattcaa 5331092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 63 - 234
Target Start/End: Complemental strand, 6228211 - 6228044
Alignment:
Q  63 gaactaatatatcagttatattaaactctcttttgataatcaacatggatttttaagaaatttgactatatatttgatcatatttcaattctagtttata 162  Q
    ||||||||| |||| ||| ||||||||||||||| ||||||||||    |||||||| ||| ||| ||||||||  || ||||||||||| |||||||||    
T  6228211 gaactaatagatcaattagattaaactctcttttaataatcaacacaagtttttaaggaatctgaatatatattgtataatatttcaattatagtttata 6228112  T
Q  163 ataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagcttgaattattgaaaaagttaacaa 234  Q
    ||||||  |||| |||||           |||||||||||||||||| || ||||| |||||||||||||||    
T  6228111 ataatacatttatatatg----cgaaaaattaatgtatactaataagtttaaattactgaaaaagttaacaa 6228044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 180
Target Start/End: Original strand, 2803834 - 2804000
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    ||||| ||||||||||||| |||||||||||| |||||||| |||||| | |||||| |  |   | ||||||| | ||||||||| | |||||| ||||    
T  2803834 atgaatatctttaaataagtaatgtgatctaattttaaatatactagcaagctaataaactaaagagattaaacccccttttgatatttaacatgtattt 2803933  T
Q  115 ttaaga-aatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatg 180  Q
    || ||| ||||||||| ||||||  || | ||||| ||| |||||||||||||||| || |||||||    
T  2803934 tttagagaatttgactttatattatataagatttctattttagtttataataatatattcaaatatg 2804000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 30 - 180
Target Start/End: Complemental strand, 10265883 - 10265733
Alignment:
Q  30 taagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggatttttaagaaatttgact 129  Q
    |||| |||||| ||||||||| |||| |||||| |||| ||| |||| | | ||||||||  | ||||||| | |||||| | |||||  ||||||||||    
T  10265883 taagtaatgtggtctaagtttcaatatactagcaaacttatagatcaatgagattaaacttccatttgatatttaacatgaacttttagaaaatttgact 10265784  T
Q  130 atatatttgatcatatttcaattctagtttataataatatgtttaaatatg 180  Q
    | |||||  ||||| |||||| |||| ||||||||||||  ||||||||||    
T  10265783 aaatattatatcatgtttcaactctaatttataataatacatttaaatatg 10265733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 82 - 164
Target Start/End: Original strand, 33011716 - 33011798
Alignment:
Q  82 attaaactctcttttgataatcaacatggatttttaagaaatttgactatatatttgatcatatttcaattctagtttataat 164  Q
    |||||||| || ||||||||||||||||  |||||| | |||||||  |||||||  ||||||||||||||||||||||||||    
T  33011716 attaaactatcatttgataatcaacatgagtttttacggaatttgatcatatattatatcatatttcaattctagtttataat 33011798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 17225391 - 17225440
Alignment:
Q  203 taataagcttgaattattgaaaaagttaacaaatttttatgttaattcaa 252  Q
    |||||||||| ||||| ||||||||||||||||||||||| |||||||||    
T  17225391 taataagcttaaattactgaaaaagttaacaaatttttattttaattcaa 17225440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 6228412 - 6228374
Alignment:
Q  18 aacatctttaaataagcaatgtgatctaagtttaaatag 56  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  6228412 aacatatttaaataagcaatgtgatctaagtttaaatag 6228374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 33011615 - 33011661
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactag 61  Q
    ||||||||||||||||||  |||||||| ||||||||||||||||||    
T  33011615 atgaacatctttaaataaataatgtgatataagtttaaatagactag 33011661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 5167211 - 5167267
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaata 71  Q
    |||| |||||||||||| ||||| | |||||||||||||| ||| ||||||||||||    
T  5167211 atgatcatctttaaatatgcaatataatctaagtttaaatggacgagcgaactaata 5167267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 249
Target Start/End: Complemental strand, 26244193 - 26244145
Alignment:
Q  201 actaataagcttgaattattgaaaaagttaacaaatttttatgttaatt 249  Q
    ||||||||| || ||||||||||||||||||||||||| ||| ||||||    
T  26244193 actaataagtttaaattattgaaaaagttaacaaatttatattttaatt 26244145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 182
Target Start/End: Original strand, 17225173 - 17225223
Alignment:
Q  132 atatttgatcatatttcaattctagtttataataatatgtttaaatatgaa 182  Q
    |||||| |||||||||||||| |||||||||||||||  ||||||| ||||    
T  17225173 atatttcatcatatttcaattatagtttataataatacatttaaatttgaa 17225223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 333
Target Start/End: Original strand, 33248324 - 33248373
Alignment:
Q  284 ttattcatatttacttcaatatgccgacctaatatgcctaggaggctttt 333  Q
    |||||||||||||||| |||| | |||||||||| ||||| |||||||||    
T  33248324 ttattcatatttacttaaataggtcgacctaataggcctaagaggctttt 33248373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 97; Significance: 2e-47; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 15 - 252
Target Start/End: Complemental strand, 11079 - 10845
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaac--tctcttttgataatcaacatggat 112  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||| | |||||||||||  |||||||||||||||||||||  |    
T  11079 atgaacatctttaaataagcaatatgatctaagtttaaatagactatcaaactaatatataaattatattaaacgatctcttttgataatcaacatgagt 10980  T
Q  113 ttttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatgaagnnnnnnnnttaatgtatactaataagctt 212  Q
    | ||| ||||||||||||||||||  |||| ||| ||||| ||||||| |||||||  |||||||||| |         |||||| |||||||||| |||    
T  10979 tattaggaaatttgactatatattatatcacattccaattatagtttagaataatacatttaaatatgca-----aaaattaatgaatactaataaactt 10885  T
Q  213 gaattattgaaaaagttaacaaatttttatgttaattcaa 252  Q
     ||||| |||||||||||||||| ||| || |||||||||    
T  10884 aaattactgaaaaagttaacaaactttaattttaattcaa 10845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 86; Significance: 6e-41; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 53144 - 52979
Alignment:
Q  15 atgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattt 114  Q
    |||||||||||||||||| ||||  |||||||||||||||||| || ||||||||||||||  ||| ||||||||||||||||||||||||||    |||    
T  53144 atgaacatctttaaataaacaattagatctaagtttaaatagattaacgaactaatatatcgattaaattaaactctcttttgataatcaacagaagttt 53045  T
Q  115 ttaagaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatg 180  Q
    ||| |||||||||||| |||||  ||||||||||||||||| ||||||||| ||  ||||||||||    
T  53044 ttaggaaatttgactacatattgtatcatatttcaattctaatttataatattacatttaaatatg 52979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 16 - 179
Target Start/End: Complemental strand, 325042 - 324879
Alignment:
Q  16 tgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggatttt 115  Q
    |||| ||||||||||||| ||||||||||||  |||||||||||| |||| ||||| |||| | ||||||||| |||||| |||| | |||||| | |||    
T  325042 tgaagatctttaaataagtaatgtgatctaatgttaaatagactaacgaattaataaatcaatgatattaaaccctctttcgatatttaacatgaagttt 324943  T
Q  116 ta-agaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatat 179  Q
    || |||||||| | | ||||||  ||||||| ||||||||  |||||| |||||  |||||||||    
T  324942 tagagaaattt-attgtatattaaatcatatctcaattcttatttatagtaatacatttaaatat 324879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0373 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 18 - 180
Target Start/End: Original strand, 7278 - 7439
Alignment:
Q  18 aacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcagttatattaaactctcttttgataatcaacatggattttta 117  Q
    |||||||||||||||| |||| |||||||  |||||| ||||| | | |||||| |||| | |||||||| ||| ||| |||| | |||||| | |||||    
T  7278 aacatctttaaataagtaatgcgatctaatgttaaattgactaccaagctaatagatcaatgatattaaattct-tttcgatatttaacatgaagtttta 7376  T
Q  118 -agaaatttgactatatatttgatcatatttcaattctagtttataataatatgtttaaatatg 180  Q
     |||| ||| ||||||||||  ||||||||||||||||| ||||||||||||  ||||||||||    
T  7377 gagaagttt-actatatattatatcatatttcaattctaatttataataatacatttaaatatg 7439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University