View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15508_low_19 (Length: 201)
Name: NF15508_low_19
Description: NF15508
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15508_low_19 |
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Alignment Details
Target: chr6 (Bit Score: 111; Significance: 3e-56; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 33428428 - 33428318
Alignment:
| Q |
1 |
aaaagcatgtcatttgttgcttaattagacgacagaatataatacaaaggtgttaagattaaaaagaaaaatattatgattttgttactttacgttattt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33428428 |
aaaagcatgtcatttgttgcttaattagacgacagaatataatacaaaggtgttaagattaaaaagaaaaatattatgattttgttactttacgttattt |
33428329 |
T |
|
| Q |
101 |
agggatctgcc |
111 |
Q |
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||||||||||| |
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| T |
33428328 |
agggatctgcc |
33428318 |
T |
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