View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15509_high_6 (Length: 233)
Name: NF15509_high_6
Description: NF15509
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15509_high_6 |
 | |
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| [»] scaffold0026 (2 HSPs) |
| | |
|
| [»] scaffold0029 (1 HSPs) |
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| [»] scaffold1773 (1 HSPs) |
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| [»] scaffold0006 (1 HSPs) |
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| [»] scaffold0025 (1 HSPs) |
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| [»] scaffold0924 (1 HSPs) |
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| [»] scaffold0117 (2 HSPs) |
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| [»] scaffold0058 (1 HSPs) |
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| [»] scaffold0553 (1 HSPs) |
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| [»] scaffold0544 (1 HSPs) |
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| [»] scaffold0247 (1 HSPs) |
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| [»] scaffold0090 (1 HSPs) |
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| [»] scaffold0476 (1 HSPs) |
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| [»] scaffold0077 (1 HSPs) |
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| [»] scaffold0456 (2 HSPs) |
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| [»] scaffold0634 (1 HSPs) |
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| [»] scaffold0154 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 120; Significance: 2e-61; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 11848131 - 11847964
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatga |
100 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||| | | |||||||||| |
|
|
| T |
11848131 |
ctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaatcaattgagggttagggtttgatgacgattctgaagaggaatgggtaatga |
11848032 |
T |
|
| Q |
101 |
tcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcata |
168 |
Q |
| |
|
|| ||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11848031 |
tcatgttaatccttttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcata |
11847964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 8045870 - 8046030
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatga |
100 |
Q |
| |
|
||||||||||||||| |||||||| | ||||||||||| |||| |||||||||||||||||||| | || ||||||||||||| ||||||| || |
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|
| T |
8045870 |
ctataatttctgaaa-ttgacctaattgcatagttttggaaaa------taaattgagggttagggtttgacgagaattctgaagggaaatgggtaaaga |
8045962 |
T |
|
| Q |
101 |
tcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcata |
168 |
Q |
| |
|
| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
8045963 |
taatgttaattctcttgtaatataatgttcagaatgaaaacttaatccttgttgttgctgtgatcata |
8046030 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026 (Bit Score: 109; Significance: 6e-55; HSPs: 2)
Name: scaffold0026
Description:
Target: scaffold0026; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 11888 - 12049
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatga |
100 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||| |||| ||||||||| |||||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
11888 |
ctataatttctgaaaattgacctaattgcatagttttggaaaa------taaattgagagttagggtttgatgatgattctgaagggaaatgggtaatga |
11981 |
T |
|
| Q |
101 |
tcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcata |
168 |
Q |
| |
|
|| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11982 |
tcatgttaattctcttgtaatataatcttcagaatgaaaacttaatctttgttgttgctgtgatcata |
12049 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 111703 - 111543
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatga |
100 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||| ||||| ||||||||||||||||||| ||||||||||||| |||||| ||||| ||| |
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|
| T |
111703 |
ctataatttctgaaaattgacctaattgcatagttttggaaaat------aaattgagggttagggtttgatgatgattctgaggggaat-gggtattga |
111611 |
T |
|
| Q |
101 |
tcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcata |
168 |
Q |
| |
|
|| ||||||||| ||||||| ||||||| |||||||||||||||||| | ||||| |||||||||| |
|
|
| T |
111610 |
tcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata |
111543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 109; Significance: 6e-55; HSPs: 8)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 15168193 - 15168032
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatga |
100 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||| || || ||||||||||||||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
15168193 |
ctataatttctgaaaattgacctaattgcatagttttggaagat------aaattgagggttagggtttgatgatgattctgaagggaaatgggtaatga |
15168100 |
T |
|
| Q |
101 |
tcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcata |
168 |
Q |
| |
|
|| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
15168099 |
tcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata |
15168032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 18873378 - 18873217
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatga |
100 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||| || || ||||||||||||||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
18873378 |
ctataatttctgaaaattgacctaattgcatagttttggaagat------aaattgagggttagggtttgatgatgattctgaagggaaatgggtaatga |
18873285 |
T |
|
| Q |
101 |
tcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcata |
168 |
Q |
| |
|
|| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
18873284 |
tcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata |
18873217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 49 - 168
Target Start/End: Original strand, 10895871 - 10895989
Alignment:
| Q |
49 |
ataaattgagggttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct |
148 |
Q |
| |
|
|||||||| |||||||||||| ||||||||||||| |||||| ||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
10895871 |
ataaattgtgggttagggtttgatgatgattctgaggggaat-gggtattgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct |
10895969 |
T |
|
| Q |
149 |
ttgttgttgctgtgatcata |
168 |
Q |
| |
|
|||||| ||||||||||||| |
|
|
| T |
10895970 |
ttgttgctgctgtgatcata |
10895989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 14423002 - 14422841
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatga |
100 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||||| || ||||||||||||||||||||| ||||||||||||| |||||| ||||| ||| |
|
|
| T |
14423002 |
ctataatttctgaaaattgacctaattgcatagtttttggaag-----ataaattgagggttagggtttgatgatgattctgaggggaat-gggtattga |
14422909 |
T |
|
| Q |
101 |
tcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcata |
168 |
Q |
| |
|
|| ||||||||| ||||||| ||||||| |||||||||||||||||| | |||||| |||||||||| |
|
|
| T |
14422908 |
tcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgatcata |
14422841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 46 - 165
Target Start/End: Original strand, 12709919 - 12710038
Alignment:
| Q |
46 |
aaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattc-ccttgtaatataatgttcagaatgaaaactta |
144 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| ||||| ||| |||||||||||| ||||||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
12709919 |
aaaataaattgagggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaactta |
12710018 |
T |
|
| Q |
145 |
atctttgttgttgctgtgatc |
165 |
Q |
| |
|
||| ||||||||||||||||| |
|
|
| T |
12710019 |
atc-ttgttgttgctgtgatc |
12710038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 46 - 165
Target Start/End: Original strand, 13122990 - 13123109
Alignment:
| Q |
46 |
aaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattc-ccttgtaatataatgttcagaatgaaaactta |
144 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| ||||| ||| |||||||||||| ||||||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
13122990 |
aaaataaattgagggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaactta |
13123089 |
T |
|
| Q |
145 |
atctttgttgttgctgtgatc |
165 |
Q |
| |
|
||| ||||||||||||||||| |
|
|
| T |
13123090 |
atc-ttgttgttgctgtgatc |
13123109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 46 - 168
Target Start/End: Complemental strand, 13743688 - 13743566
Alignment:
| Q |
46 |
aaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaa |
145 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| ||||| ||| |||||||||||| |||||||| |||||| ||| |||||||| |||| |||||| |
|
|
| T |
13743688 |
aaaataaattgagggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattttcttgtattatgctgttcagattgaagacttaa |
13743589 |
T |
|
| Q |
146 |
tctttgttgttgctgtgatcata |
168 |
Q |
| |
|
||| |||| |||||||||||||| |
|
|
| T |
13743588 |
tctatgttattgctgtgatcata |
13743566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 16009594 - 16009434
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatga |
100 |
Q |
| |
|
|||||||||||||||||||||||| | |||| |||||| || || |||||| |||||| ||||| ||||||||||||| |||||| ||||| ||| |
|
|
| T |
16009594 |
ctataatttctgaaaattgacctaattgcatggttttggaagat------aaattgtgggttaaggtttgatgatgattctgaggggaat-gggtattga |
16009502 |
T |
|
| Q |
101 |
tcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcata |
168 |
Q |
| |
|
|| ||||||||| ||||||| ||||||| |||||||||||||||||| | ||||| |||||||||| |
|
|
| T |
16009501 |
tcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata |
16009434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 109; Significance: 6e-55; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 22751159 - 22750998
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatga |
100 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||| || || ||||||||||||||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
22751159 |
ctataatttctgaaaattgacctaattgcatagttttggaagat------aaattgagggttagggtttgatgatgattctgaagggaaatgggtaatga |
22751066 |
T |
|
| Q |
101 |
tcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcata |
168 |
Q |
| |
|
|| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
22751065 |
tcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata |
22750998 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 38144574 - 38144734
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatga |
100 |
Q |
| |
|
|||||||||||||||||||||||| | ||||| ||||| ||||| ||||||||||||||||||| ||||||||||||| |||||| ||||| ||| |
|
|
| T |
38144574 |
ctataatttctgaaaattgacctaattgcataattttggaaaat------aaattgagggttagggtttgatgatgattctgaggggaat-gggtattga |
38144666 |
T |
|
| Q |
101 |
tcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcata |
168 |
Q |
| |
|
|| ||||||||| ||||||| ||||||| |||||||||||||||||| | ||||| |||||||||| |
|
|
| T |
38144667 |
tcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata |
38144734 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 28370092 - 28370252
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatga |
100 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||| ||||| ||||||||||||||||||| ||||||||| ||| |||||| ||||| ||| |
|
|
| T |
28370092 |
ctataatttctgaaaattgacctaattgcatagttttggaaaat------aaattgagggttagggtttgatgatgattttgaggggaat-gggtattga |
28370184 |
T |
|
| Q |
101 |
tcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcata |
168 |
Q |
| |
|
|| ||||||||| |||||| ||||||| |||||||||||||||||| | ||||| |||||||||| |
|
|
| T |
28370185 |
tcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata |
28370252 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 19512404 - 19512243
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatga |
100 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||||| || ||||||||||||||||||||| ||||||||| ||| |||||| ||||| ||| |
|
|
| T |
19512404 |
ctataatttctgaaaattgacctaattgcatagtttttggaag-----ataaattgagggttagggtttgatgatgattttgaggggaat-gggtattga |
19512311 |
T |
|
| Q |
101 |
tcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcata |
168 |
Q |
| |
|
|| ||||||||| |||||| ||||||| |||||||||||||||||| | ||||| |||||||||| |
|
|
| T |
19512310 |
tcatgttaattctattgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata |
19512243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 109; Significance: 6e-55; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 14762795 - 14762956
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatga |
100 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||| || || ||||||||||||||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
14762795 |
ctataatttctgaaaattgacctaattgcatagttttggaagat------aaattgagggttagggtttgatgatgattctgaagggaaatgggtaatga |
14762888 |
T |
|
| Q |
101 |
tcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcata |
168 |
Q |
| |
|
|| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
14762889 |
tcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata |
14762956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 20247826 - 20247987
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatga |
100 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||| || || ||||||||||||||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
20247826 |
ctataatttctgaaaattgacctaattgcatagttttggaagat------aaattgagggttagggtttgatgatgattctgaagggaaatgggtaatga |
20247919 |
T |
|
| Q |
101 |
tcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcata |
168 |
Q |
| |
|
|| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
20247920 |
tcatgttaattttcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata |
20247987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 38310837 - 38310998
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatga |
100 |
Q |
| |
|
|||||||||||||| ||||||||| | ||||||||||| || || ||||||||||||||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
38310837 |
ctataatttctgaatattgacctaattgcatagttttggaagat------aaattgagggttagggtttgatgatgattctgaagggaaatgggtaatga |
38310930 |
T |
|
| Q |
101 |
tcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcata |
168 |
Q |
| |
|
|| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
38310931 |
tcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata |
38310998 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 24192974 - 24192817
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatga |
100 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||||| || ||||||||||||||||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
24192974 |
ctataatttctgaaaattgacctaattgcatagtttttggaag-----ataaattgagggttagggtttgatgatgattctgaagggaaatgggtaatga |
24192880 |
T |
|
| Q |
101 |
tcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtga |
163 |
Q |
| |
|
|| ||||||||| ||||||| | |||||||||||||||||||||||| || ||||||||||| |
|
|
| T |
24192879 |
tcatgttaattctgttgtaatgtgatgttcagaatgaaaacttaatctatgctgttgctgtga |
24192817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 9534345 - 9534205
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatga |
100 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||| ||||| ||||||||||||||||||| ||||||||||||| ||||| ||||| ||| |
|
|
| T |
9534345 |
ctataatttctgaaaattgacctaattgcatagttttggaaaat------aaattgagggttagggtttgatgatgattctgagtggaat-gggtattga |
9534253 |
T |
|
| Q |
101 |
tcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct |
148 |
Q |
| |
|
|| ||||||||| ||||||| ||||||| |||||||||||||||||| |
|
|
| T |
9534252 |
tcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatct |
9534205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 23370543 - 23370704
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatga |
100 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||||| || |||||||| |||||||||||| ||||||||||||| |||||| ||||| ||| |
|
|
| T |
23370543 |
ctataatttctgaaaattgacctaattgcatagtttttggaag-----ataaattgtgggttagggtttgatgatgattctgaggggaat-gggtattga |
23370636 |
T |
|
| Q |
101 |
tcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcata |
168 |
Q |
| |
|
|| ||||||||| ||||||| ||||||| |||||||||||||||||| | ||||| |||||||||| |
|
|
| T |
23370637 |
tcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata |
23370704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 51 - 168
Target Start/End: Original strand, 55499185 - 55499301
Alignment:
| Q |
51 |
aaattgagggttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatcttt |
150 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| ||||| |||||||||||| |||||||| ||||||| | |||||| |||||||| |||||||| | |
|
|
| T |
55499185 |
aaattgagggttagggtttgatgatgattctgaggggaa-tgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatctat |
55499283 |
T |
|
| Q |
151 |
gttgttgctgtgatcata |
168 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
55499284 |
acagttgctgtgatcata |
55499301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 105; Significance: 1e-52; HSPs: 8)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 23057956 - 23057795
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatga |
100 |
Q |
| |
|
|||||||| ||||||||||||||| | ||||||||||| || || ||||||||||||||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
23057956 |
ctataattcctgaaaattgacctaattgcatagttttggaagat------aaattgagggttagggtttgatgatgattctgaagggaaatgggtaatga |
23057863 |
T |
|
| Q |
101 |
tcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcata |
168 |
Q |
| |
|
|| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
23057862 |
tcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata |
23057795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 29614184 - 29614345
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatga |
100 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||| ||||||||| ||||||||| |||||||||| |
|
|
| T |
29614184 |
ctataatttctgaaaattgacctagttgcataattttgga-----aaaataaattgagggttagggtttgatgatgattatgaagggaaatgggtaatga |
29614278 |
T |
|
| Q |
101 |
tcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcata |
168 |
Q |
| |
|
|| ||||||||| ||||| || |||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29614279 |
tcatgttaattctcttgt-attgaatgtttagaatgaaaacttaatctttgttgttgctgtgatcata |
29614345 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 49 - 168
Target Start/End: Original strand, 10986261 - 10986379
Alignment:
| Q |
49 |
ataaattgagggttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct |
148 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||| |||||| ||||| ||||| ||||||||| ||||||| |||||||||||||||||||||||||| |
|
|
| T |
10986261 |
ataaattgagggttagggtttgatgatgattctgaggggaat-gggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatct |
10986359 |
T |
|
| Q |
149 |
ttgttgttgctgtgatcata |
168 |
Q |
| |
|
| ||||| |||||||||| |
|
|
| T |
10986360 |
atactgttgttgtgatcata |
10986379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 23839216 - 23839055
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagt-tttgaaaaattaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatg |
99 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||| |||| || || ||||||||||||||||||| ||||||||||| | |||||| ||||| || |
|
|
| T |
23839216 |
ctataatttctgaaaattgacctaattgcatagtgtttggaagat------aaattgagggttagggtttgatgatgattctaaggggaat-gggtattg |
23839124 |
T |
|
| Q |
100 |
atcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcata |
168 |
Q |
| |
|
||| ||||||||| ||||||| |||||||||||||||||||||||||| | ||||| |||||||||| |
|
|
| T |
23839123 |
atcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcata |
23839055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 4477875 - 4477714
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatga |
100 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||||| || |||||||| |||||||||||| ||||||||||||| |||||| ||||| ||| |
|
|
| T |
4477875 |
ctataatttctgaaaattgacctaattgcatagtttttggaag-----ataaattgtgggttagggtttgatgatgattctgaggggaat-gggtattga |
4477782 |
T |
|
| Q |
101 |
tcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcata |
168 |
Q |
| |
|
|| || |||||| ||||||| ||||||| |||||||||||||||||| | |||||| |||||||||| |
|
|
| T |
4477781 |
tcatgctaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgatcata |
4477714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 18800455 - 18800296
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatga |
100 |
Q |
| |
|
|||||||||||||||||||||||| | || |||||||| ||||| || |||||||||||||||| |||||||||||| |||||| || ||||||| |
|
|
| T |
18800455 |
ctataatttctgaaaattgacctaattgcttagttttggaaaatagaa-----ttgagggttagggtttgatgatgattctggagggaa-tgagtaatga |
18800362 |
T |
|
| Q |
101 |
tcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatca |
166 |
Q |
| |
|
|| ||||||||| ||||||| | ||||||| ||||||| |||||||| | |||||| |||||||| |
|
|
| T |
18800361 |
tcatgttaattctgttgtaatgtgatgttcaaaatgaaatcttaatctatattgttgttgtgatca |
18800296 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 51 - 168
Target Start/End: Original strand, 21565294 - 21565410
Alignment:
| Q |
51 |
aaattgagggttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatcttt |
150 |
Q |
| |
|
||||||||||||||||||| ||||||||||| | |||||| ||||||||||| |||||||| ||||||| | | |||| |||||||| |||||||| | |
|
|
| T |
21565294 |
aaattgagggttagggtttgatgatgattctaaggggaat-gggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctat |
21565392 |
T |
|
| Q |
151 |
gttgttgctgtgatcata |
168 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
21565393 |
actgttgctgtgatcata |
21565410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 930133 - 930227
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatga |
100 |
Q |
| |
|
||||| |||||||||||||||||| | | |||||||||||||| |||||||||||||||||||| |||||| |||||||||||| |||||||||| |
|
|
| T |
930133 |
ctatagtttctgaaaattgacctaattgtatagttttgaaaaa------taaattgagggttagggtttgatgatgtttctgaagggaa-tgggtaatga |
930225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029 (Bit Score: 102; Significance: 8e-51; HSPs: 1)
Name: scaffold0029
Description:
Target: scaffold0029; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 111900 - 111738
Alignment:
| Q |
1 |
ctataatttctgaaaa-ttgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatg |
99 |
Q |
| |
|
|||||||||||||||| |||||||| | ||||||||||| || || ||||||||||||||||||| ||||||||||||||||||| ||||||||| |
|
|
| T |
111900 |
ctataatttctgaaaaattgacctaattgcatagttttggaagat------aaattgagggttagggtttgatgatgattctgaagggaaatgggtaatg |
111807 |
T |
|
| Q |
100 |
atcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcata |
168 |
Q |
| |
|
||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
111806 |
atcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata |
111738 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1773 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold1773
Description:
Target: scaffold1773; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 46 - 168
Target Start/End: Complemental strand, 1157 - 1036
Alignment:
| Q |
46 |
aaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaa |
145 |
Q |
| |
|
|||||||||||||||||||||||| |||| |||| ||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
1157 |
aaaataaattgagggttagggtttgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaa |
1058 |
T |
|
| Q |
146 |
tctttgttgttgctgtgatcata |
168 |
Q |
| |
|
|| |||||||||||||||||||| |
|
|
| T |
1057 |
tc-ttgttgttgctgtgatcata |
1036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0006
Description:
Target: scaffold0006; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 46 - 168
Target Start/End: Complemental strand, 50158 - 50037
Alignment:
| Q |
46 |
aaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaa |
145 |
Q |
| |
|
|||||||||||||||||||||||| |||| |||| ||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
50158 |
aaaataaattgagggttagggtttgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaa |
50059 |
T |
|
| Q |
146 |
tctttgttgttgctgtgatcata |
168 |
Q |
| |
|
|| |||||||||||||||||||| |
|
|
| T |
50058 |
tc-ttgttgttgctgtgatcata |
50037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0025 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0025
Description:
Target: scaffold0025; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 14433 - 14595
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatga |
100 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||||| || ||||||||||||||||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
14433 |
ctataatttctgaaaattgacctaattgcatagtttttggaag-----ataaattgagggttagggtttgatgatgattctgaagggaaatgggtaatga |
14527 |
T |
|
| Q |
101 |
tcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcata |
168 |
Q |
| |
|
|| ||||||||| ||||||| | |||||| ||||||||||||||||| || |||||||||||||||| |
|
|
| T |
14528 |
tcatgttaattctgttgtaatgtgatgttccgaatgaaaacttaatctatgctgttgctgtgatcata |
14595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 77; Significance: 7e-36; HSPs: 7)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 19661491 - 19661651
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatga |
100 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||| || || ||||||||||||||||||| ||||||||||||| |||||| ||||| ||| |
|
|
| T |
19661491 |
ctataatttctgaaaattgacctaattgcatagttttggaagat------aaattgagggttagggtttgatgatgattctgaggggaat-gggtattga |
19661583 |
T |
|
| Q |
101 |
tcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcata |
168 |
Q |
| |
|
|| ||||||||| ||||||| ||||||| |||||||||||||||||| | |||||| |||||||||| |
|
|
| T |
19661584 |
tcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgatcata |
19661651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 6483735 - 6483575
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatga |
100 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||| ||||| ||||||||||||||||||| ||||||||| ||| |||||| ||||| ||| |
|
|
| T |
6483735 |
ctataatttctgaaaattgacctaattgcatagttttggaaaat------aaattgagggttagggtttgatgatgattttgaggggaat-gggtattga |
6483643 |
T |
|
| Q |
101 |
tcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcata |
168 |
Q |
| |
|
|| ||||||||| |||||| ||||||| |||||||||||||||||| | ||||| |||||||||| |
|
|
| T |
6483642 |
tcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata |
6483575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 6487202 - 6487042
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatga |
100 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||| ||||| ||||||||||||||||||| ||||||||| ||| |||||| ||||| ||| |
|
|
| T |
6487202 |
ctataatttctgaaaattgacctaattgcatagttttggaaaat------aaattgagggttagggtttgatgatgattttgaggggaat-gggtattga |
6487110 |
T |
|
| Q |
101 |
tcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcata |
168 |
Q |
| |
|
|| ||||||||| |||||| ||||||| |||||||||||||||||| | ||||| |||||||||| |
|
|
| T |
6487109 |
tcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata |
6487042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 50 - 168
Target Start/End: Complemental strand, 23878982 - 23878865
Alignment:
| Q |
50 |
taaattgagggttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctt |
149 |
Q |
| |
|
||||||||||||||||||| |||||||||||| |||||| ||||||||||| |||||||| ||||||| | ||||||||||||||| |||||||| |
|
|
| T |
23878982 |
taaattgagggttagggttgt-tgatgattctgaggggaatggggtaatgatcatgttaattatgttgtaatgtgatgttcagaatgaaatcttaatcta |
23878884 |
T |
|
| Q |
150 |
tgttgttgctgtgatcata |
168 |
Q |
| |
|
| ||||| |||||||||| |
|
|
| T |
23878883 |
tactgttgttgtgatcata |
23878865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 51 - 168
Target Start/End: Original strand, 23089137 - 23089253
Alignment:
| Q |
51 |
aaattgagggttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatcttt |
150 |
Q |
| |
|
||||||||||||||||||| ||||||||||| | |||||| ||||||||||| |||||||| ||||||| | | |||| |||||||| |||||||| | |
|
|
| T |
23089137 |
aaattgagggttagggtttgatgatgattctaaggggaat-gggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctat |
23089235 |
T |
|
| Q |
151 |
gttgttgctgtgatcata |
168 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
23089236 |
actgttgctgtgatcata |
23089253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 51 - 168
Target Start/End: Original strand, 23101545 - 23101661
Alignment:
| Q |
51 |
aaattgagggttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatcttt |
150 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| ||||| |||||||||||| |||||||| ||||||| | | |||| |||||||| |||||||| | |
|
|
| T |
23101545 |
aaattgagggttagggtttgatgatgattctgaggggaa-tgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctat |
23101643 |
T |
|
| Q |
151 |
gttgttgctgtgatcata |
168 |
Q |
| |
|
||||| |||||||||| |
|
|
| T |
23101644 |
actgttgttgtgatcata |
23101661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 26583844 - 26583687
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatga |
100 |
Q |
| |
|
||||||||||||||| |||||||| | ||||||||||| ||||| |||||||||||||||| || ||||||||||||| ||||| ||||||||| |
|
|
| T |
26583844 |
ctataatttctgaaa-ttgacctaattgcatagttttggaaaat------aaattgagggttagggcttgatgatgattctgaggggaa-agggtaatga |
26583753 |
T |
|
| Q |
101 |
tcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatca |
166 |
Q |
| |
|
|| |||||| | |||||| | |||||||||||||| | |||||| | |||||||||||||| |
|
|
| T |
26583752 |
tcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctataatgttgctgtgatca |
26583687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0924 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0924
Description:
Target: scaffold0924; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 788 - 949
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatga |
100 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||||| ||| ||||||||||||||||||||| |||| |||| ||||||||| |||||||||| |
|
|
| T |
788 |
ctataatttctgaaaattgacctaattgcatagtttttggaaa-----ataaattgagggttagggtttgatgaggattatgaagggaaatgggtaatga |
882 |
T |
|
| Q |
101 |
tcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcata |
168 |
Q |
| |
|
|| || |||| | ||||||||||||||||||| || ||||||||||| ||||||||| |||||||||| |
|
|
| T |
883 |
tcatgataatactcttgtaatataatgttcaggataaaaacttaatc-ttgttgttgatgtgatcata |
949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 69; Significance: 4e-31; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 44477640 - 44477480
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatga |
100 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||| ||||| ||||||||||||||||||| ||||||||| ||| |||||| ||||| ||| |
|
|
| T |
44477640 |
ctataatttctgaaaattgacctaattgcatagttttggaaaat------aaattgagggttagggtttgatgatgattttgaggggaat-gggtattga |
44477548 |
T |
|
| Q |
101 |
tcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcata |
168 |
Q |
| |
|
|| ||||||||| |||||| ||||||| |||||||||||||||||| | ||||| |||||||||| |
|
|
| T |
44477547 |
tcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata |
44477480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 44492798 - 44492638
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatga |
100 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||| ||||| ||||||||||||||||||| ||||||||| ||| |||||| ||||| ||| |
|
|
| T |
44492798 |
ctataatttctgaaaattgacctaattgcatagttttggaaaat------aaattgagggttagggtttgatgatgattttgaggggaat-gggtattga |
44492706 |
T |
|
| Q |
101 |
tcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcata |
168 |
Q |
| |
|
|| ||||||||| |||||| ||||||| |||||||||||||||||| | ||||| |||||||||| |
|
|
| T |
44492705 |
tcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata |
44492638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 46 - 165
Target Start/End: Complemental strand, 23866594 - 23866475
Alignment:
| Q |
46 |
aaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattc-ccttgtaatataatgttcagaatgaaaactta |
144 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| ||||| ||| |||||||||||| ||||||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
23866594 |
aaaataaattgagggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaactta |
23866495 |
T |
|
| Q |
145 |
atctttgttgttgctgtgatc |
165 |
Q |
| |
|
||| ||||||||||| ||||| |
|
|
| T |
23866494 |
atc-ttgttgttgctctgatc |
23866475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 8727770 - 8727931
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatga |
100 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||||| || ||||||||||||||||||||| | ||||||||||| ||| || ||||| ||| |
|
|
| T |
8727770 |
ctataatttctgaaaattgacctaattgcatagtttttggaag-----ataaattgagggttagggtttgacgatgattctgaggggtat-gggtattga |
8727863 |
T |
|
| Q |
101 |
tcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcata |
168 |
Q |
| |
|
|| ||||||||| ||||||| |||||||||||||||||||||||||| | ||||| |||||||||| |
|
|
| T |
8727864 |
tcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcata |
8727931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 61 - 148
Target Start/End: Original strand, 27940946 - 27941032
Alignment:
| Q |
61 |
ttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct |
148 |
Q |
| |
|
||||||||| ||||||||||||| |||||| ||||| ||||| ||||||||| ||||||| |||||||||||||||||| ||||||| |
|
|
| T |
27940946 |
ttagggtttgatgatgattctgaggggaat-gggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaatttaatct |
27941032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0117 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0117
Description:
Target: scaffold0117; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 46 - 168
Target Start/End: Original strand, 1975 - 2095
Alignment:
| Q |
46 |
aaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaa |
145 |
Q |
| |
|
||||||| |||||||||||||||| ||||||||| ||| || | ||||||||||| ||||||||| |||||||| ||||||||| ||||||||||||| |
|
|
| T |
1975 |
aaaataatttgagggttagggtttgatgatgattttgatggaa--tgggtaatgattatgttaattctcttgtaatttaatgttcataatgaaaacttaa |
2072 |
T |
|
| Q |
146 |
tctttgttgttgctgtgatcata |
168 |
Q |
| |
|
|| |||||||||||||||||||| |
|
|
| T |
2073 |
tccttgttgttgctgtgatcata |
2095 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0117; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 46 - 168
Target Start/End: Original strand, 8652 - 8772
Alignment:
| Q |
46 |
aaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaa |
145 |
Q |
| |
|
||||||| |||||||||||||||| ||||||||| ||| || | ||||||||||| ||||||||| |||||||| ||||||||| ||||||||||||| |
|
|
| T |
8652 |
aaaataatttgagggttagggtttgatgatgattatgatggaa--tgggtaatgattatgttaattctcttgtaatttaatgttcaaaatgaaaacttaa |
8749 |
T |
|
| Q |
146 |
tctttgttgttgctgtgatcata |
168 |
Q |
| |
|
|| |||||||||||||||||||| |
|
|
| T |
8750 |
tccttgttgttgctgtgatcata |
8772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 20437061 - 20437222
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatga |
100 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||||| || ||||||||||||||||||||| ||||||||||||| |||||| ||||| ||| |
|
|
| T |
20437061 |
ctataatttctgaaaattgacctaattgcatagtttttggaag-----ataaattgagggttagggtttgatgatgattctgaggggaat-gggtattga |
20437154 |
T |
|
| Q |
101 |
tcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcata |
168 |
Q |
| |
|
|| |||||||| ||||||| |||||||||||||||||||||||||| | ||||| |||||||||| |
|
|
| T |
20437155 |
tcatgttaattatgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcata |
20437222 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0058 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0058
Description:
Target: scaffold0058; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 308 - 149
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatga |
100 |
Q |
| |
|
||||||||||||||| |||||||| | ||||||||||| ||||| ||||||||||||||||||| ||||||||||||| ||||| |||||||||| |
|
|
| T |
308 |
ctataatttctgaaa-ttgacctaattgcatagttttggaaaat------aaattgagggttagggtttgatgatgattctgaggggaa-tgggtaatga |
217 |
T |
|
| Q |
101 |
tcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcata |
168 |
Q |
| |
|
|| |||||||| |||||| ||| |||||||| |||| ||||||||| |||| ||| |||||||||| |
|
|
| T |
216 |
tcatgttaattttcttgtattatggtgttcagattgaagacttaatctatgttattgatgtgatcata |
149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0553 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0553
Description:
Target: scaffold0553; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 10233 - 10394
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatga |
100 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||||| || |||||||| |||||||||||| ||||||||||||| |||||| ||||| ||| |
|
|
| T |
10233 |
ctataatttctgaaaattgacctaattgcatagtttttggaag-----ataaattgtgggttagggtttgatgatgattctgaggggaat-gggtattga |
10326 |
T |
|
| Q |
101 |
tcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcata |
168 |
Q |
| |
|
|| ||||||||| ||||||| ||||||| |||||||||||||||||| | ||||| |||||||||| |
|
|
| T |
10327 |
tcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata |
10394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0544 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0544
Description:
Target: scaffold0544; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 1563 - 1724
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatga |
100 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||||| || |||||||| |||||||||||| ||||||||||||| |||||| ||||| ||| |
|
|
| T |
1563 |
ctataatttctgaaaattgacctaattgcatagtttttggaag-----ataaattgtgggttagggtttgatgatgattctgaggggaat-gggtattga |
1656 |
T |
|
| Q |
101 |
tcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcata |
168 |
Q |
| |
|
|| ||||||||| ||||||| ||||||| |||||||||||||||||| | ||||| |||||||||| |
|
|
| T |
1657 |
tcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata |
1724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0247 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0247
Description:
Target: scaffold0247; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 11359 - 11200
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatga |
100 |
Q |
| |
|
|||||||||||||||||||||||| | || |||||||| ||||| || |||||||||||||||| |||||||||||| |||||| || ||||||| |
|
|
| T |
11359 |
ctataatttctgaaaattgacctaattgcttagttttggaaaatagaa-----ttgagggttagggtttgatgatgattctggagggaa-tgagtaatga |
11266 |
T |
|
| Q |
101 |
tcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatca |
166 |
Q |
| |
|
|| ||||||||| ||||||| | ||||||| ||||||| ||||||| | |||||||||||||| |
|
|
| T |
11265 |
tcatgttaattctgttgtaatgtgatgttcaaaatgaaatcttaatccatactgttgctgtgatca |
11200 |
T |
|
Back To:
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Target: scaffold0090 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0090
Description:
Target: scaffold0090; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 46 - 167
Target Start/End: Complemental strand, 18147 - 18026
Alignment:
| Q |
46 |
aaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattccctt-gtaatataatgttcagaatgaaaactta |
144 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| | ||||| ||| ||||| || ||||||||| || ||||| | |||| ||||||||||||||| |
|
|
| T |
18147 |
aaaataaattgagggttaaggtttaatgatgattctaacgggaaatgg-taatggtcatgttaattctgtttgtaatgtgatgtccagaatgaaaactta |
18049 |
T |
|
| Q |
145 |
atctttgttgttgctgtgatcat |
167 |
Q |
| |
|
| || |||||||||||||||||| |
|
|
| T |
18048 |
acctatgttgttgctgtgatcat |
18026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0476 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0476
Description:
Target: scaffold0476; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 51 - 166
Target Start/End: Original strand, 3375 - 3490
Alignment:
| Q |
51 |
aaattgagggttagggtttaatgatgattctgaagggaattgggtaatg-atcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctt |
149 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| ||||| ||||||||| ||| |||||||| ||||||| | ||||||||||||||| |||||||| |
|
|
| T |
3375 |
aaattgagggttagggtttgatgatgattctgaggggaa-tgggtaatgaatcatgttaattttgttgtaatgtgatgttcagaatgaaatcttaatcta |
3473 |
T |
|
| Q |
150 |
tgttgttgctgtgatca |
166 |
Q |
| |
|
| |||||||||||||| |
|
|
| T |
3474 |
tactgttgctgtgatca |
3490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0077 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0077
Description:
Target: scaffold0077; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 51 - 168
Target Start/End: Original strand, 3704 - 3820
Alignment:
| Q |
51 |
aaattgagggttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatcttt |
150 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| ||| || ||||||||||| |||||||| ||||||| | |||||| |||||||| |||||||| | |
|
|
| T |
3704 |
aaattgagggttagggtttgatgatgattctgagggggat-gggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatctat |
3802 |
T |
|
| Q |
151 |
gttgttgctgtgatcata |
168 |
Q |
| |
|
||||| |||||||||| |
|
|
| T |
3803 |
actgttgttgtgatcata |
3820 |
T |
|
Back To:
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Target: scaffold0456 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0456
Description:
Target: scaffold0456; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 115 - 168
Target Start/End: Complemental strand, 899 - 846
Alignment:
| Q |
115 |
ttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcata |
168 |
Q |
| |
|
||||||| | |||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
899 |
ttgtaatgtgatgttcagaatgaaaacttaatctgtgttgttgctgtgatcata |
846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0456; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 115 - 168
Target Start/End: Complemental strand, 8044 - 7991
Alignment:
| Q |
115 |
ttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcata |
168 |
Q |
| |
|
||||||| | |||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
8044 |
ttgtaatgtgatgttcagaatgaaaacttaatctgtgttgttgctgtgatcata |
7991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0634 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0634
Description:
Target: scaffold0634; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 129 - 168
Target Start/End: Complemental strand, 3558 - 3519
Alignment:
| Q |
129 |
tcagaatgaaaacttaatctttgttgttgctgtgatcata |
168 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3558 |
tcagaatgaaaacttaatctttgttgttgctgtgatcata |
3519 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0154 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0154
Description:
Target: scaffold0154; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 30875 - 30772
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatga |
100 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||| || | ||||||||| ||||||||| ||||||||| ||| |||||| | |||| || |
|
|
| T |
30875 |
ctataatttctgaaaattgacctaattgcatagttttggaaggt-----aaaattgaggattagggtttgatgatgattttgaggggaatggtgtaacga |
30781 |
T |
|
| Q |
101 |
tcgtgttaa |
109 |
Q |
| |
|
|| |||||| |
|
|
| T |
30780 |
tcatgttaa |
30772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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