View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1550_high_9 (Length: 248)
Name: NF1550_high_9
Description: NF1550
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1550_high_9 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 231; Significance: 1e-128; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 231; E-Value: 1e-128
Query Start/End: Original strand, 18 - 248
Target Start/End: Original strand, 21878387 - 21878617
Alignment:
| Q |
18 |
gagtgttggtgctacgtagctttatacaattctgttaaatagaattctaactgtttttgtgtaaaaggttatagtgttgagtgcttctgcaaatagattg |
117 |
Q |
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| T |
21878387 |
gagtgttggtgctacgtagctttatacaattctgttaaatagaattctaactgtttttgtgtaaaaggttatagtgttgagtgcttctgcaaatagattg |
21878486 |
T |
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| Q |
118 |
ggaaatcttaaacaacatgctgataattatgcttctttgatcatggaagagcttgatccagatcataatggatatatagaggtaattagaattagaagcc |
217 |
Q |
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| T |
21878487 |
ggaaatcttaaacaacatgctgataattatgcttctttgatcatggaagagcttgatccagatcataatggatatatagaggtaattagaattagaagcc |
21878586 |
T |
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| Q |
218 |
gattaaattgtaacgacatatatcttctgtt |
248 |
Q |
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| T |
21878587 |
gattaaattgtaacgacatatatcttctgtt |
21878617 |
T |
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