View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15510_low_1 (Length: 360)
Name: NF15510_low_1
Description: NF15510
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15510_low_1 |
 | |
|
| [»] scaffold0477 (1 HSPs) |
| | |
|
| [»] scaffold0288 (2 HSPs) |
| | |
|
| [»] scaffold0475 (3 HSPs) |
| | |
|
| [»] scaffold0199 (2 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 257; Significance: 1e-143; HSPs: 51)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 46 - 338
Target Start/End: Original strand, 4256151 - 4256442
Alignment:
| Q |
46 |
gaagataccaagtgtcttgaatggcttgaatccaaggaacctgagtctgttgtttacgtgaaattttggcagcatcacagttatgactccagatcaactg |
145 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| |
|
|
| T |
4256151 |
gaagataccaagtgtcttgaatggcttgaatccaaggaacctgagtctgttgtttacgtgaa-ttttggcagcattacagttatgactccagatcaactg |
4256249 |
T |
|
| Q |
146 |
ttagagtttgcttggggattggccaatagcaagaaaccatttttgtggatcattaggcctgacctcgtcattggtggctcctttattttgtcatctgagt |
245 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4256250 |
ttagagtttgcttggggattggccaatagcaagaaaccatttttgtgtatcattaggcctgacctcgtcattggtggctcctttattttgtcatctgagt |
4256349 |
T |
|
| Q |
246 |
ttcggatagaggaccaatcgcgggttggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttaactcattgcggatggaa |
338 |
Q |
| |
|
|||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |
|
|
| T |
4256350 |
ttcggatagaggactaatcgagagttggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttgactcattgaggatggaa |
4256442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 46 - 338
Target Start/End: Original strand, 4259681 - 4259985
Alignment:
| Q |
46 |
gaagataccaagtgtcttgaatggcttgaatccaaggaacctgagtctgttgtttacgtgaaattttggcagcatcacagttatgactccagatcaactg |
145 |
Q |
| |
|
||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| | |
|
|
| T |
4259681 |
gaagataccaaatgtcttgaatggcttgaatttaaggaacctgagtctgttgtttacgtgaa-ttttggcagcattacagttatgactccagatcaattt |
4259779 |
T |
|
| Q |
146 |
ttagagtttgcttggggattggccaatagcaagaaaccatttttgtggatcattaggcctgacctcgtcattggtggctcctttattttgtcatctgag- |
244 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |
|
|
| T |
4259780 |
ttagagtttgcttggggattggccaatagcaagaaaccctttttgtggatcattaggcctgacctcattattggtggctcctttattttgtcatctgagt |
4259879 |
T |
|
| Q |
245 |
------------tttcggatagaggaccaatcgcgggttggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttaactcattgcgg |
332 |
Q |
| |
|
||||||||||||| | ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4259880 |
ttgagagtgaaatttcggatagaggcctaatcgcgagctggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttaactcattgcgg |
4259979 |
T |
|
| Q |
333 |
atggaa |
338 |
Q |
| |
|
|||||| |
|
|
| T |
4259980 |
atggaa |
4259985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 46 - 342
Target Start/End: Complemental strand, 4461728 - 4461420
Alignment:
| Q |
46 |
gaagataccaagtgtcttgaatggcttgaatccaaggaacctgagtctgttgtttacgtgaaattttggcagcatcacagttatgactccagatcaactg |
145 |
Q |
| |
|
|||||||| || |||||||||||||||||||| || ||||| | |||||||| || || |||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
4461728 |
gaagatactaaatgtcttgaatggcttgaatcaaaagaaccaggatctgttgtctatgt-aaattttggcagcatcacagttatgactcctgatcaactg |
4461630 |
T |
|
| Q |
146 |
ttagagtttgcttggggattggccaatagcaagaaaccatttttgtggatcattaggcctgacctcgtcattggtggctcctttattttgtcatctgag- |
244 |
Q |
| |
|
||||||||||||||||| ||||| ||||||||||||| ||||| ||||||||||||||||| || |||||||| ||||| |||||||||||||||||| |
|
|
| T |
4461629 |
ttagagtttgcttggggtttggctgatagcaagaaaccctttttatggatcattaggcctgatcttgtcattggcggctcgtttattttgtcatctgagt |
4461530 |
T |
|
| Q |
245 |
------------tttcggatagaggaccaatcgcgggttggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttaactcattgcgg |
332 |
Q |
| |
|
|||| |||||||| | ||| || | |||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||| || |
|
|
| T |
4461529 |
ttgtgaatgaaatttcagatagaggcctaatagcaagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgactcattgtgg |
4461430 |
T |
|
| Q |
333 |
atggaattca |
342 |
Q |
| |
|
|||||||||| |
|
|
| T |
4461429 |
atggaattca |
4461420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 46 - 342
Target Start/End: Complemental strand, 4622745 - 4622439
Alignment:
| Q |
46 |
gaagataccaagtgtcttgaatggcttgaatccaaggaacctgagtctgttgtttacgtgaaattttggcagcatcacagttatgactccagatcaactg |
145 |
Q |
| |
|
||||||| |||||||||||| ||||||||||||||||||||||| ||| |||||||||||| |||||||||||| ||||| ||||||| ||||||||| |
|
|
| T |
4622745 |
gaagatatcaagtgtcttgagtggcttgaatccaaggaacctgactct--tgtttacgtgaa-ttttggcagcattacagtgatgactcgagatcaacta |
4622649 |
T |
|
| Q |
146 |
ttagagtttgcttggggattggccaatagcaagaaaccatttttgtggatcattaggcctgacctcgtcattggtggctcctttattttgtcatctgag- |
244 |
Q |
| |
|
||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||| ||||| || ||||| |||||||||||||||||| |
|
|
| T |
4622648 |
ttagagtttgcttggggtttggctgatagcaagaaaccctttttgtggatcattaggcctgaccttgtcatgggcggctcgtttattttgtcatctgagt |
4622549 |
T |
|
| Q |
245 |
------------tttcggatagaggaccaatcgcgggttggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttaactcattgcgg |
332 |
Q |
| |
|
|||| | |||||| | |||||| ||||||||||| |||||| ||||||| |||||| || || ||||||||||||| |||||||| || |
|
|
| T |
4622548 |
ttgagaatgaaatttcaggtagaggcctaatcgcaggttggtgtccacaagaggaagtacttaaccaccctgcaattggtggattcttgactcattgtgg |
4622449 |
T |
|
| Q |
333 |
atggaattca |
342 |
Q |
| |
|
|||||||||| |
|
|
| T |
4622448 |
atggaattca |
4622439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 46 - 247
Target Start/End: Original strand, 4299348 - 4299548
Alignment:
| Q |
46 |
gaagataccaagtgtcttgaatggcttgaatccaaggaacctgagtctgttgtttacgtgaaattttggcagcatcacagttatgactccagatcaactg |
145 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||| || | || |||||||| ||||| |||||||||| | ||||||||||||||||| |||||| |
|
|
| T |
4299348 |
gaagataccaaatgtcttgaatggcttgaatccaaggagccgggatcggttgtttatgtgaa-ttttggcagcgttacagttatgactccagagcaactg |
4299446 |
T |
|
| Q |
146 |
ttagagtttgcttggggattggccaatagcaagaaaccatttttgtggatcattaggcctgacctcgtcattggtggctcctttattttgtcatctgagt |
245 |
Q |
| |
|
|||||| |||||||||| ||||||||| ||| ||||||||||||||||||||||||||| ||||| |||||||| |||| ||||||||||||||||||| |
|
|
| T |
4299447 |
ttagagattgcttggggtttggccaattgcaggaaaccatttttgtggatcattaggccagaccttgtcattggcggcttgtttattttgtcatctgagt |
4299546 |
T |
|
| Q |
246 |
tt |
247 |
Q |
| |
|
|| |
|
|
| T |
4299547 |
tt |
4299548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 46 - 338
Target Start/End: Complemental strand, 4626556 - 4626252
Alignment:
| Q |
46 |
gaagataccaagtgtcttgaatggcttgaatccaaggaacctgagtctgttgtttacgtgaaattttggcagcatcacagttatgactccagatcaactg |
145 |
Q |
| |
|
||||| ||||| ||||||||||||||||||| ||||||||| ||||||||||||| ||||| ||| |||||| | | ||||||||||||| | ||||| |
|
|
| T |
4626556 |
gaagacaccaattgtcttgaatggcttgaattcaaggaaccaaagtctgttgtttatgtgaacttt-ggcagcgttatagttatgactccacagaaactg |
4626458 |
T |
|
| Q |
146 |
ttagagtttgcttggggattggccaatagcaagaaaccatttttgtggatcattaggcctgacctcgtcattggtggctcctttattttgtcatctgag- |
244 |
Q |
| |
|
||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||| || || ||||||||||| ||||||| |||||| ||| |
|
|
| T |
4626457 |
ttagagtttgcttggggtttggctgatagcaagaaaccctttttgtggatcattaggcctgatcttgtgattggtggctcatttatttcgtcatccgagt |
4626358 |
T |
|
| Q |
245 |
------------tttcggatagaggaccaatcgcgggttggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttaactcattgcgg |
332 |
Q |
| |
|
|||| |||||||| | |||||| | ||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||| || |
|
|
| T |
4626357 |
ttgagaatgaaatttcagatagaggcctaatcgcaagctggtgtccgcaagagaaagtactgaaccatccttcaattggtggattcttaactcattgtgg |
4626258 |
T |
|
| Q |
333 |
atggaa |
338 |
Q |
| |
|
|||||| |
|
|
| T |
4626257 |
atggaa |
4626252 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 49 - 338
Target Start/End: Complemental strand, 4586238 - 4585937
Alignment:
| Q |
49 |
gataccaagtgtcttgaatggcttgaatccaaggaacctgagtctgttgtttacgtgaaattttggcagcatcacagttatgactccagatcaactgtta |
148 |
Q |
| |
|
||||||||||||||||| ||||||||||| |||||||| ||| |||||||| ||||| |||||| |||| |||||||||||| |||| |||| ||| |
|
|
| T |
4586238 |
gataccaagtgtcttgattggcttgaatcaaaggaaccgaggtccgttgtttatgtgaa-ttttgggagcacaacagttatgactacagaaaaactatta |
4586140 |
T |
|
| Q |
149 |
gagtttgcttggggattggccaatagcaagaaaccatttttgtggatcattaggcctgacctcgtcattggtggctcctttattttgtcatctgag---- |
244 |
Q |
| |
|
|||||||||||||| ||||||||||||||| ||| ||||| ||||||||||| ||||| || ||||||||||| ||||| |||||||||||||| |
|
|
| T |
4586139 |
gagtttgcttggggtttggccaatagcaagcaacattttttatggatcattagacctgatcttgtcattggtggttccttggttttgtcatctgagttta |
4586040 |
T |
|
| Q |
245 |
---------tttcggatagaggaccaatcgcgggttggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttaactcattgcggatg |
335 |
Q |
| |
|
|||| |||||||| | ||||||||||||||| ||||||||||||||| |||||||| ||||| ||||||||||||| ||||| || ||||| |
|
|
| T |
4586039 |
agaatgaaatttcagatagaggcctaatcgcgggttggtgcccgcaagagcaagtattgaaccacccttcaattggtggattcttgactcactgtggatg |
4585940 |
T |
|
| Q |
336 |
gaa |
338 |
Q |
| |
|
||| |
|
|
| T |
4585939 |
gaa |
4585937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 46 - 338
Target Start/End: Original strand, 4613245 - 4613549
Alignment:
| Q |
46 |
gaagataccaagtgtcttgaatggcttgaatccaaggaacctgagtctgttgtttacgtgaaattttggcagcatcacagttatgactccagatcaactg |
145 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||| |||| |||||||| ||||| |||||| ||||| || ||||||||| |||| |||| |
|
|
| T |
4613245 |
gaagataccaagtgtcttgattggcttgaatccaaggaaccgaagtccgttgtttatgtgaa-ttttgggagcatgaccgttatgactgcagaaaaacta |
4613343 |
T |
|
| Q |
146 |
ttagagtttgcttggggattggccaatagcaagaaaccatttttgtggatcattaggcctgacctcgtcattggtggctcctttattttgtcatctgag- |
244 |
Q |
| |
|
||||||||||||||||| ||||| ||||||||| |||| ||||||||||||||||||||||| || |||||||| ||||| || |||||||||| ||| |
|
|
| T |
4613344 |
ttagagtttgcttggggtttggcgaatagcaagcaaccctttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagt |
4613443 |
T |
|
| Q |
245 |
------------tttcggatagaggaccaatcgcgggttggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttaactcattgcgg |
332 |
Q |
| |
|
|||| |||||||| | ||||||| | |||||||| |||||||||||| | |||||| ||||| |||| |||||||| |||||||| || |
|
|
| T |
4613444 |
ttgtgaatgaaatttcagatagaggcctaatcgcgagctggtgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtgg |
4613543 |
T |
|
| Q |
333 |
atggaa |
338 |
Q |
| |
|
|||||| |
|
|
| T |
4613544 |
atggaa |
4613549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 46 - 338
Target Start/End: Complemental strand, 4580037 - 4579733
Alignment:
| Q |
46 |
gaagataccaagtgtcttgaatggcttgaatccaaggaacctgagtctgttgtttacgtgaaattttggcagcatcacagttatgactccagatcaactg |
145 |
Q |
| |
|
|||||||||||||||||| | ||||||||||||||||||||| |||||||||||| ||||| |||||| ||| | |||||||||||| |||| ||||| |
|
|
| T |
4580037 |
gaagataccaagtgtctttattggcttgaatccaaggaacctaggtctgttgtttatgtgaa-ttttgggagcttgacagttatgactgcagaaaaactg |
4579939 |
T |
|
| Q |
146 |
ttagagtttgcttggggattggccaatagcaagaaaccatttttgtggatcattaggcctgacctcgtcattggtggctcctttattttgtcatctgag- |
244 |
Q |
| |
|
||||||||||| ||||| || || ||||||||| |||| |||||||||||||||||||| || || ||||| || ||||| | |||||||||| ||| |
|
|
| T |
4579938 |
ttagagtttgcatggggtttagcaaatagcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggcggctcagctgttttgtcatcggagt |
4579839 |
T |
|
| Q |
245 |
------------tttcggatagaggaccaatcgcgggttggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttaactcattgcgg |
332 |
Q |
| |
|
|||| |||||||| | ||| || | |||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||| |
|
|
| T |
4579838 |
ttgtgaatgaaatttcagatagaggcctaataacgagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgactcattgcgg |
4579739 |
T |
|
| Q |
333 |
atggaa |
338 |
Q |
| |
|
|||||| |
|
|
| T |
4579738 |
atggaa |
4579733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 58 - 240
Target Start/End: Complemental strand, 4516914 - 4516733
Alignment:
| Q |
58 |
tgtcttgaatggcttgaatccaaggaacctgagtctgttgtttacgtgaaattttggcagcatcacagttatgactccagatcaactgttagagtttgct |
157 |
Q |
| |
|
|||||||||||||||||||| ||||||| | ||||| ||||| ||||| |||||| |||||||| || |||||||||||||||||||||||||| ||| |
|
|
| T |
4516914 |
tgtcttgaatggcttgaatctaaggaacaaggttctgtagtttatgtgaa-ttttggaagcatcacggtcatgactccagatcaactgttagagttcgct |
4516816 |
T |
|
| Q |
158 |
tggggattggccaatagcaagaaaccatttttgtggatcattaggcctgacctcgtcattggtggctcctttattttgtcatc |
240 |
Q |
| |
|
||||| |||||||| ||||||||||| ||||||||||| |||||||||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
4516815 |
tggggtttggccaacagcaagaaaccttttttgtggattattaggcctgaccttgtcattggtggctcggttattttgtcatc |
4516733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 46 - 247
Target Start/End: Complemental strand, 4564316 - 4564116
Alignment:
| Q |
46 |
gaagataccaagtgtcttgaatggcttgaatccaaggaacctgagtctgttgtttacgtgaaattttggcagcatcacagttatgactccagatcaactg |
145 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||| || | || |||||||| ||||| |||||| ||||| ||||||||||| ||| | |||||| |
|
|
| T |
4564316 |
gaagatactaagtgtcttgaatggcttgaatccaaggagccgggatccgttgtttatgtgaa-ttttggaagcattacagttatgacaccaaaacaactg |
4564218 |
T |
|
| Q |
146 |
ttagagtttgcttggggattggccaatagcaagaaaccatttttgtggatcattaggcctgacctcgtcattggtggctcctttattttgtcatctgagt |
245 |
Q |
| |
|
|| || ||||||||||| ||||||||| |||| ||||| |||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||| |
|
|
| T |
4564217 |
ttggaatttgcttgggggttggccaattgcaataaaccctttttgtggatcattaggcctgaccttgtcattggtggctcagtcgttttgtcatctgagt |
4564118 |
T |
|
| Q |
246 |
tt |
247 |
Q |
| |
|
|| |
|
|
| T |
4564117 |
tt |
4564116 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 46 - 247
Target Start/End: Complemental strand, 4598776 - 4598576
Alignment:
| Q |
46 |
gaagataccaagtgtcttgaatggcttgaatccaaggaacctgagtctgttgtttacgtgaaattttggcagcatcacagttatgactccagatcaactg |
145 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| ||||| |||||||||||| ||||| |||||| ||||| || || |||||| |||| | || |
|
|
| T |
4598776 |
gaagataccaagtgtcttgactggcttgaatccaatgaaccaaggtctgttgtttatgtgaa-ttttgggagcataacggtgatgactgcagaaaagttg |
4598678 |
T |
|
| Q |
146 |
ttagagtttgcttggggattggccaatagcaagaaaccatttttgtggatcattaggcctgacctcgtcattggtggctcctttattttgtcatctgagt |
245 |
Q |
| |
|
||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||| || |||||||||| |||| |
|
|
| T |
4598677 |
ttagactttgcttggggtttggccaatagcaagaaaccctttttgtggatcattaggcctgatcttgtcattggtggctcggttgttttgtcatcggagt |
4598578 |
T |
|
| Q |
246 |
tt |
247 |
Q |
| |
|
|| |
|
|
| T |
4598577 |
tt |
4598576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 46 - 338
Target Start/End: Complemental strand, 4557730 - 4557426
Alignment:
| Q |
46 |
gaagataccaagtgtcttgaatggcttgaatccaaggaacctgagtctgttgtttacgtgaaattttggcagcatcacagttatgactccagatcaactg |
145 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||||| ||| |||||||| ||||| |||||| ||||| ||||||||||| |||| ||||| |
|
|
| T |
4557730 |
gaagataacaagtgtcttggttggcttgaatccaaggaaccgaggtccgttgtttatgtgaa-ttttgggagcatgacagttatgacggcagaaaaactg |
4557632 |
T |
|
| Q |
146 |
ttagagtttgcttggggattggccaatagcaagaaaccatttttgtggatcattaggcctgacctcgtcattggtggctcctttattttgtcatctgag- |
244 |
Q |
| |
|
||||||||||| ||||| || || ||||||||| |||| |||||||||||||||||||| || || ||||| |||||||| || |||||||||| ||| |
|
|
| T |
4557631 |
ttagagtttgcatggggtttagcaaatagcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggtggctcagttgttttgtcatcggagt |
4557532 |
T |
|
| Q |
245 |
------------tttcggatagaggaccaatcgcgggttggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttaactcattgcgg |
332 |
Q |
| |
|
|||| |||||||| | ||||||||| ||||| ||||||||||||||| | ||||| ||||| ||||||||||||| |||||||| || |
|
|
| T |
4557531 |
ttgtcaatgaaatttcagatagaggcctaatcgcgggctggtgcccgcaagagcaagtattaaaccatccttcaattggtggattcttgactcattgtgg |
4557432 |
T |
|
| Q |
333 |
atggaa |
338 |
Q |
| |
|
|||||| |
|
|
| T |
4557431 |
atggaa |
4557426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 46 - 247
Target Start/End: Complemental strand, 4602394 - 4602194
Alignment:
| Q |
46 |
gaagataccaagtgtcttgaatggcttgaatccaaggaacctgagtctgttgtttacgtgaaattttggcagcatcacagttatgactccagatcaactg |
145 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||| || | || |||||||| ||||| |||||||||||| ||||||||||| || ||||| | |
|
|
| T |
4602394 |
gaagatactgagtgtcttgaatggcttgaatccaaggagccgggatccgttgtttatgtgaa-ttttggcagcattacagttatgacaccccatcaatta |
4602296 |
T |
|
| Q |
146 |
ttagagtttgcttggggattggccaatagcaagaaaccatttttgtggatcattaggcctgacctcgtcattggtggctcctttattttgtcatctgagt |
245 |
Q |
| |
|
||||| || |||||||| ||||||||| || | ||||||||||||||||||||||||||||| || |||||||||||||| | |||||||||||||||| |
|
|
| T |
4602295 |
ttagaattcgcttggggtttggccaattgccataaaccatttttgtggatcattaggcctgatcttgtcattggtggctcagtgattttgtcatctgagt |
4602196 |
T |
|
| Q |
246 |
tt |
247 |
Q |
| |
|
|| |
|
|
| T |
4602195 |
tt |
4602194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 46 - 338
Target Start/End: Complemental strand, 4561109 - 4560807
Alignment:
| Q |
46 |
gaagataccaagtgtcttgaatggcttgaatccaaggaacctgagtctgttgtttacgtgaaattttggcagcatcacagttatgactccagatcaactg |
145 |
Q |
| |
|
|||||||| || |||||||||||||||||||| || ||||| | ||||||||||| || |||||||||||||||||| |||| | ||| ||| | | |
|
|
| T |
4561109 |
gaagatactaaatgtcttgaatggcttgaatcaaaagaaccaggatctgttgtttatgt-aaattttggcagcatcactgttaagtctcaagagaagcc- |
4561012 |
T |
|
| Q |
146 |
ttagagtttgcttggggattggccaatagcaagaaaccatttttgtggatcattaggcctgacctcgtcattggtggctcctttattttgtcatctg--- |
242 |
Q |
| |
|
||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||| || |||||||||||||| | |||| ||||||| |
|
|
| T |
4561011 |
ttagagtttgcttggggtttggccaacagcaagaaaccatttttatggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgatt |
4560912 |
T |
|
| Q |
243 |
---------agtttcggatagaggaccaatcgcgggttggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttaactcattgcgga |
333 |
Q |
| |
|
| |||| |||||||||| ||| || |||||||||| |||||| ||||| |||||||| | ||||| ||||||||||| |||||||||||| |
|
|
| T |
4560911 |
tttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagtattgaaccacccatcagtcggtggattcttgactcattgcgga |
4560812 |
T |
|
| Q |
334 |
tggaa |
338 |
Q |
| |
|
||||| |
|
|
| T |
4560811 |
tggaa |
4560807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 46 - 338
Target Start/End: Complemental strand, 4470408 - 4470104
Alignment:
| Q |
46 |
gaagataccaagtgtcttgaatggcttgaatccaaggaacctgagtctgttgtttacgtgaaattttggcagcatcacagttatgactccagatcaactg |
145 |
Q |
| |
|
|||||||| || |||||||| ||||||||||| || ||||| | |||||||| || || |||||| |||||| ||||||||||| ||||||| ||||| |
|
|
| T |
4470408 |
gaagatactaaatgtcttgagtggcttgaatcaaaagaaccaggatctgttgtctatgt-aaatttcggcagcgtcacagttatgtctccagagaaactg |
4470310 |
T |
|
| Q |
146 |
ttagagtttgcttggggattggccaatagcaagaaaccatttttgtggatcattaggcctgacctcgtcattggtggctcctttattttgtcatctgag- |
244 |
Q |
| |
|
||||||||||||||||| ||||| ||||||||| |||| |||||||||||||||||||| || || |||||||| ||||| | |||| ||||| ||| |
|
|
| T |
4470309 |
ttagagtttgcttggggtttggcaaatagcaagcaaccctttttgtggatcattaggcccgatcttgtcattggcggctcggtagttttctcatcagaga |
4470210 |
T |
|
| Q |
245 |
------------tttcggatagaggaccaatcgcgggttggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttaactcattgcgg |
332 |
Q |
| |
|
|||| |||||||| | ||||| | |||||||| ||||||||||||||||||||| ||||| | ||||||||||| ||||||||||| |
|
|
| T |
4470209 |
ttgtaaatggaatttcagatagaggcctaatcgtgaactggtgtcctcaagagcaagtactgaaccacccttcaatcggtggattcttgactcattgcgg |
4470110 |
T |
|
| Q |
333 |
atggaa |
338 |
Q |
| |
|
|||||| |
|
|
| T |
4470109 |
atggaa |
4470104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 46 - 338
Target Start/End: Complemental strand, 4574913 - 4574609
Alignment:
| Q |
46 |
gaagataccaagtgtcttgaatggcttgaatccaaggaacctgagtctgttgtttacgtgaaattttggcagcatcacagttatgactccagatcaactg |
145 |
Q |
| |
|
|||||||| || |||||||||||| ||||||| || ||||| ||||||||||| || |||||||||||||||||| |||||| ||| ||| | || |
|
|
| T |
4574913 |
gaagatactaaatgtcttgaatggattgaatcaaaagaaccaagatctgttgtttatgt-aaattttggcagcatcactgttatgtctcgagagaagctc |
4574815 |
T |
|
| Q |
146 |
ttagagtttgcttggggattggccaatagcaagaaaccatttttgtggatcattaggcctgacctcgtcattggtggctcctttattttgtcatctg--- |
242 |
Q |
| |
|
|||||||||||||||| |||||||| ||||| ||||| ||||||||||||||||||||||| || |||||||||||||| | |||| ||||||| |
|
|
| T |
4574814 |
gtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgatt |
4574715 |
T |
|
| Q |
243 |
----------agtttcggatagaggaccaatcgcgggttggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttaactcattgcgg |
332 |
Q |
| |
|
| |||| |||||||||| ||| || |||||||||| |||||| ||||| |||||||| |||||| ||||||||||| ||||||||||| |
|
|
| T |
4574714 |
ttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcgg |
4574615 |
T |
|
| Q |
333 |
atggaa |
338 |
Q |
| |
|
|||||| |
|
|
| T |
4574614 |
atggaa |
4574609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 46 - 225
Target Start/End: Original strand, 4489882 - 4490060
Alignment:
| Q |
46 |
gaagataccaagtgtcttgaatggcttgaatccaaggaacctgagtctgttgtttacgtgaaattttggcagcatcacagttatgactccagatcaactg |
145 |
Q |
| |
|
|||||||| || |||||||||||||||||||| || ||||| | ||||||||||| || |||||||||||||||||| |||||| ||| ||| | || |
|
|
| T |
4489882 |
gaagatactaaatgtcttgaatggcttgaatcaaaagaaccaggatctgttgtttatgt-aaattttggcagcatcactgttatgtctcgagagaagcta |
4489980 |
T |
|
| Q |
146 |
ttagagtttgcttggggattggccaatagcaagaaaccatttttgtggatcattaggcctgacctcgtcattggtggctc |
225 |
Q |
| |
|
||||||||||| ||||| |||||||| ||||||||||| ||||||||||||||||||||||| || || ||||||||||| |
|
|
| T |
4489981 |
ttagagtttgcatggggtttggccaacagcaagaaaccctttttgtggatcattaggcctgatcttgttattggtggctc |
4490060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 46 - 225
Target Start/End: Original strand, 4503924 - 4504102
Alignment:
| Q |
46 |
gaagataccaagtgtcttgaatggcttgaatccaaggaacctgagtctgttgtttacgtgaaattttggcagcatcacagttatgactccagatcaactg |
145 |
Q |
| |
|
|||||||| || |||||||| |||||||||| || ||||| | ||||||||||| || ||||||||||||||| ||||||||| || |||| || || |
|
|
| T |
4503924 |
gaagatactaaatgtcttgattggcttgaattaaaagaaccaggatctgttgtttatgt-aaattttggcagcattacagttatgtcttaagataaattg |
4504022 |
T |
|
| Q |
146 |
ttagagtttgcttggggattggccaatagcaagaaaccatttttgtggatcattaggcctgacctcgtcattggtggctc |
225 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||| || || ||||||||||| |
|
|
| T |
4504023 |
ttagagtttgcttggggtttggccaatagcaagaaaccttttttgtggattattaggcctgatcttgttattggtggctc |
4504102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 46 - 247
Target Start/End: Complemental strand, 3172346 - 3172146
Alignment:
| Q |
46 |
gaagataccaagtgtcttgaatggcttgaatccaaggaacctgagtctgttgtttacgtgaaattttggcagcatcacagttatgactccagatcaactg |
145 |
Q |
| |
|
|||||||| || |||||||||||||||||| | || ||| | | ||||||||||| || ||||||||||||||||| ||||||| ||| ||| || | |
|
|
| T |
3172346 |
gaagatactaaatgtcttgaatggcttgaaacaaaagaatcaaaatctgttgtttatgt-aaattttggcagcatcatagttatgtctcaagagaaatta |
3172248 |
T |
|
| Q |
146 |
ttagagtttgcttggggattggccaatagcaagaaaccatttttgtggatcattaggcctgacctcgtcattggtggctcctttattttgtcatctgagt |
245 |
Q |
| |
|
||||||||||||||||| || ||||| ||||||||||| ||||||||||| ||||||||||| || |||||||||||||| || |||||||||| |||| |
|
|
| T |
3172247 |
ttagagtttgcttggggtttagccaacagcaagaaaccctttttgtggattattaggcctgatcttgtcattggtggctcggttgttttgtcatcggagt |
3172148 |
T |
|
| Q |
246 |
tt |
247 |
Q |
| |
|
|| |
|
|
| T |
3172147 |
tt |
3172146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 46 - 342
Target Start/End: Original strand, 4266693 - 4267001
Alignment:
| Q |
46 |
gaagataccaagtgtcttgaatggcttgaatccaaggaacctgagtctgttgtttacgtgaaattttggcagcatcacagttatgactccagatcaactg |
145 |
Q |
| |
|
|||||||| || |||||||| ||||||||||| || ||||| ||||||||||| || ||||||||| ||||||||||||||| | | ||| | || |
|
|
| T |
4266693 |
gaagatactaaatgtcttgagtggcttgaatcaaaagaaccaagatctgttgtttatgt-aaattttggtagcatcacagttatgtcacgagagaagctc |
4266791 |
T |
|
| Q |
146 |
ttagagtttgcttggggattggccaatagcaagaaaccatttttgtggatcattaggcctgacctcgtcattggtggctcctttattttgtcatctg--- |
242 |
Q |
| |
|
||||||||||||||||| |||||||| |||||||| || ||||||||||| ||||||||||| || |||||||| ||||| || |||||||||||| |
|
|
| T |
4266792 |
ttagagtttgcttggggtttggccaacagcaagaacccttttttgtggataattaggcctgatcttgtcattgggggctcagttgttttgtcatctgatt |
4266891 |
T |
|
| Q |
243 |
----------agtttcggatagaggaccaatcgcgggttggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttaactcattgcgg |
332 |
Q |
| |
|
| |||| |||||||||| ||| || |||||||||| ||||| |||| |||||||| |||| ||||||||||||| ||||||||||| |
|
|
| T |
4266892 |
tttttaaagaaatttcagatagaggactaatagcaagttggtgtccacaagataaagtgttgaaccacccttcgattggtggattcttgactcattgcgg |
4266991 |
T |
|
| Q |
333 |
atggaattca |
342 |
Q |
| |
|
|||||||||| |
|
|
| T |
4266992 |
atggaattca |
4267001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 46 - 338
Target Start/End: Original strand, 4514648 - 4514952
Alignment:
| Q |
46 |
gaagataccaagtgtcttgaatggcttgaatccaaggaacctgagtctgttgtttacgtgaaattttggcagcatcacagttatgactccagatcaactg |
145 |
Q |
| |
|
|||||||| || |||||||||||||||||||| || ||| | | ||||||||||| || || |||||| |||||||| ||||| |||| || || || |
|
|
| T |
4514648 |
gaagatactaaatgtcttgaatggcttgaatcaaaagaatcaggatctgttgtttatgttaa-ttttggtagcatcacgattatgtctccggagaaattg |
4514746 |
T |
|
| Q |
146 |
ttagagtttgcttggggattggccaatagcaagaaaccatttttgtggatcattaggcctgacctcgtcattggtggctcctttattttgtcatctgagt |
245 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||| | ||||| ||||||||||||||||| || |||||||||||||| | ||||||| ||||||| |
|
|
| T |
4514747 |
ttagagtttgcttggggtttggccaatagcaagaaaacctttttatggatcattaggcctgatcttgtcattggtggctcagtggttttgtcgtctgagt |
4514846 |
T |
|
| Q |
246 |
tt-------------cggatagaggaccaatcgcgggttggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttaactcattgcgg |
332 |
Q |
| |
|
|| | |||||||| | ||| || |||||||||| |||||| |||| |||||||| ||||| |||| |||||||| ||||||||||| |
|
|
| T |
4514847 |
ttgtgaatgaaattgcagatagaggcctaatagcaagttggtgtccacaagagaaagttttgaaccacccttcaattggcggattcttgactcattgcgg |
4514946 |
T |
|
| Q |
333 |
atggaa |
338 |
Q |
| |
|
|||||| |
|
|
| T |
4514947 |
atggaa |
4514952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 46 - 247
Target Start/End: Complemental strand, 4571577 - 4571377
Alignment:
| Q |
46 |
gaagataccaagtgtcttgaatggcttgaatccaaggaacctgagtctgttgtttacgtgaaattttggcagcatcacagttatgactccagatcaactg |
145 |
Q |
| |
|
||||||| |||||||||||| ||||||||||| |||||||| ||| |||||||| ||||| |||||| |||| |||||||||||| |||| ||||| |
|
|
| T |
4571577 |
gaagataacaagtgtcttgattggcttgaatcaaaggaaccgaggtccgttgtttatgtgaa-ttttgggagcaggacagttatgacttcagaaaaactg |
4571479 |
T |
|
| Q |
146 |
ttagagtttgcttggggattggccaatagcaagaaaccatttttgtggatcattaggcctgacctcgtcattggtggctcctttattttgtcatctgagt |
245 |
Q |
| |
|
||||||||||| ||||| || || ||||||||| ||| |||||||||||||||||||| || || |||||||||||||| || |||||||||| |||| |
|
|
| T |
4571478 |
ttagagtttgcatggggtttagcaaatagcaagcaactctttttgtggatcattaggcccgatcttgtcattggtggctcagttgttttgtcatcggagt |
4571379 |
T |
|
| Q |
246 |
tt |
247 |
Q |
| |
|
|| |
|
|
| T |
4571378 |
tt |
4571377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 46 - 338
Target Start/End: Complemental strand, 4592836 - 4592532
Alignment:
| Q |
46 |
gaagataccaagtgtcttgaatggcttgaatccaaggaacctgagtctgttgtttacgtgaaattttggcagcatcacagttatgactccagatcaactg |
145 |
Q |
| |
|
|||||||| |||||||| ||||||||||||| |||||| | | || |||||||| ||||| ||| |||||| | |||||||||| | ||| || || |
|
|
| T |
4592836 |
gaagatactgagtgtcttaaatggcttgaatcgaaggaatcgggttccgttgtttatgtgaa-tttcggcagccttacagttatgaatgaagagaaaatg |
4592738 |
T |
|
| Q |
146 |
ttagagtttgcttggggattggccaatagcaagaaaccatttttgtggatcattaggcctgacctcgtcattggtggctcctttattttgtcatctgag- |
244 |
Q |
| |
|
||||||||||||||||| ||||||||| |||| ||||| ||||||||||||||||||||||| || |||||||||||| | || |||||||||| ||| |
|
|
| T |
4592737 |
ttagagtttgcttggggtttggccaattgcaataaaccttttttgtggatcattaggcctgatcttgtcattggtggcacaattgttttgtcatcggagt |
4592638 |
T |
|
| Q |
245 |
------------tttcggatagaggaccaatcgcgggttggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttaactcattgcgg |
332 |
Q |
| |
|
|||| |||||||| ||||||| | |||||||| |||||||||||| | |||||| ||||| ||||||||||||| |||||||| || |
|
|
| T |
4592637 |
ttgtgaatgaaatttcagatagaggcgtaatcgcgagctggtgtcctcaagagcaagtattaaaccacccttcaattggtggattcttgactcattgtgg |
4592538 |
T |
|
| Q |
333 |
atggaa |
338 |
Q |
| |
|
|||||| |
|
|
| T |
4592537 |
atggaa |
4592532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 46 - 247
Target Start/End: Complemental strand, 4617627 - 4617427
Alignment:
| Q |
46 |
gaagataccaagtgtcttgaatggcttgaatccaaggaacctgagtctgttgtttacgtgaaattttggcagcatcacagttatgactccagatcaactg |
145 |
Q |
| |
|
|||||||| |||||||||| ||||||||||||||||| || | || |||||||| ||||| ||| |||||||| ||||||||||| || || ||| | |
|
|
| T |
4617627 |
gaagatacagagtgtcttgattggcttgaatccaaggagccgggatcagttgtttatgtgaa-tttcggcagcattacagttatgacacccgagcaatta |
4617529 |
T |
|
| Q |
146 |
ttagagtttgcttggggattggccaatagcaagaaaccatttttgtggatcattaggcctgacctcgtcattggtggctcctttattttgtcatctgagt |
245 |
Q |
| |
|
| || ||||||||||| ||||||||| |||||||| |||||||||||||||| |||||||| || |||||||||||||| | ||||| |||||||||| |
|
|
| T |
4617528 |
ctggaatttgcttggggtttggccaattgcaagaaatcatttttgtggatcataaggcctgatcttgtcattggtggctcagtgattttctcatctgagt |
4617429 |
T |
|
| Q |
246 |
tt |
247 |
Q |
| |
|
|| |
|
|
| T |
4617428 |
tt |
4617427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 49 - 225
Target Start/End: Complemental strand, 4506459 - 4506284
Alignment:
| Q |
49 |
gataccaagtgtcttgaatggcttgaatccaaggaacctgagtctgttgtttacgtgaaattttggcagcatcacagttatgactccagatcaactgtta |
148 |
Q |
| |
|
||||| || ||||| |||||||| ||||| || ||||| | ||||||||||| ||||| |||||| ||||||||| ||||| |||| || || | ||| |
|
|
| T |
4506459 |
gatactaaatgtctcgaatggctggaatcaaaagaaccggcttctgttgtttatgtgaa-ttttggaagcatcacaattatgtctccggagaaattttta |
4506361 |
T |
|
| Q |
149 |
gagtttgcttggggattggccaatagcaagaaaccatttttgtggatcattaggcctgacctcgtcattggtggctc |
225 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| || || ||||||||||| |
|
|
| T |
4506360 |
gagtttgcttggggtttggccaatagcaagaaaccctttttgtggatcattaggcctgatcttgtaattggtggctc |
4506284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 46 - 225
Target Start/End: Complemental strand, 4481298 - 4481120
Alignment:
| Q |
46 |
gaagataccaagtgtcttgaatggcttgaatccaaggaacctgagtctgttgtttacgtgaaattttggcagcatcacagttatgactccagatcaactg |
145 |
Q |
| |
|
|||||||| || |||||||||||||||||||| || ||||| | ||||||||||| || ||||||||||||||||||| ||||| ||| ||| |||| |
|
|
| T |
4481298 |
gaagatactaaatgtcttgaatggcttgaatcaaaagaaccaggatctgttgtttatgt-aaattttggcagcatcacaattatgtctcaagagaaactc |
4481200 |
T |
|
| Q |
146 |
ttagagtttgcttggggattggccaatagcaagaaaccatttttgtggatcattaggcctgacctcgtcattggtggctc |
225 |
Q |
| |
|
||||||||||||||||| || ||||||||||| ||| ||||||||||| |||||| || | || |||||||||||||| |
|
|
| T |
4481199 |
ttagagtttgcttggggttttgccaatagcaaaaaaaactttttgtggattattaggtctaatcttgtcattggtggctc |
4481120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 58 - 240
Target Start/End: Complemental strand, 4458188 - 4458006
Alignment:
| Q |
58 |
tgtcttgaatggcttgaatccaaggaacctgagtctgttgtttacgtgaaattttggcagcatcacagttatgactccagatcaactgttagagtttgct |
157 |
Q |
| |
|
|||||||| ||||||||||| || ||||| |||||||| |||| || ||||||||| ||||||||||||||| ||| ||| | || ||||| |||||| |
|
|
| T |
4458188 |
tgtcttgagtggcttgaatcaaaagaaccaaagtctgttatttatgt-aaattttggaagcatcacagttatgtctcaagagaagctcttagaatttgct |
4458090 |
T |
|
| Q |
158 |
tggggattggccaatagcaag-aaaccatttttgtggatcattaggcctgacctcgtcattggtggctcctttattttgtcatc |
240 |
Q |
| |
|
|||| |||||||| |||||| ||||| ||||||||||| | ||||||||| || |||||||||||||| || |||||||||| |
|
|
| T |
4458089 |
tgggttttggccaacagcaagaaaaccttttttgtggataactaggcctgatcttgtcattggtggctcggttgttttgtcatc |
4458006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 125 - 338
Target Start/End: Complemental strand, 4568580 - 4568357
Alignment:
| Q |
125 |
gttatgactccagatcaactgttagagtttgcttggggattggccaatagcaagaaaccatttttgtggatcattaggcctgacctcgtcattggtggct |
224 |
Q |
| |
|
|||||||||||||| || ||||||||| |||| || || ||||| ||||||||||| ||||||||||||||||||||| | || ||||||||||||| |
|
|
| T |
4568580 |
gttatgactccagagca---gttagagttctcttgaggttttgccaacagcaagaaaccttttttgtggatcattaggccttagcttgtcattggtggct |
4568484 |
T |
|
| Q |
225 |
cctttattttgtcatctgagt-------------ttcggatagaggaccaatcgcgggttggtgtccgcaagagcaagtactgaaccactcttcagttgg |
311 |
Q |
| |
|
| ||||||||||||| |||| |||||||||||| | ||| || | |||||||||||||||||||| |||||||| |||||||||| |
|
|
| T |
4568483 |
cagttattttgtcatccgagtttgtgaatggaacttcggatagaggccaaatagcaagctggtgtccgcaagagcaagtgttgaaccacccttcagttgg |
4568384 |
T |
|
| Q |
312 |
tggattcttaactcattgcggatggaa |
338 |
Q |
| |
|
||||||| |||||||| |||||||| |
|
|
| T |
4568383 |
acgattcttgactcattgtggatggaa |
4568357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 271 - 338
Target Start/End: Complemental strand, 4598539 - 4598472
Alignment:
| Q |
271 |
tggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttaactcattgcggatggaa |
338 |
Q |
| |
|
||||||| ||||||||||||| | ||||| ||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
4598539 |
tggtgtctgcaagagcaagtattaaaccatccttcaattggtggattcttaactcattgcggatggaa |
4598472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 4255416 - 4255458
Alignment:
| Q |
1 |
tatccagttcaaggccatatcaatccattattcaaactagcaa |
43 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
4255416 |
tatccagttcaaggccatatcaatctattattcaaactagcaa |
4255458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 4612313 - 4612355
Alignment:
| Q |
1 |
tatccagttcaaggccatatcaatccattattcaaactagcaa |
43 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
4612313 |
tatccagttcaaggccatatcaatccattaatcaaactagcaa |
4612355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 4618834 - 4618792
Alignment:
| Q |
1 |
tatccagttcaaggccatatcaatccattattcaaactagcaa |
43 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
4618834 |
tatccagttcaaggccatatcaatccattgttcaaactagcaa |
4618792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 4299587 - 4299652
Alignment:
| Q |
273 |
gtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttaactcattgcggatggaa |
338 |
Q |
| |
|
|||||| ||||| ||||||||||||||| ||||| ||||||||||||| ||||| || |||||||| |
|
|
| T |
4299587 |
gtgtccacaagaacaagtactgaaccacccttcaattggtggattcttgactcactgtggatggaa |
4299652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 338
Target Start/End: Complemental strand, 4564081 - 4564012
Alignment:
| Q |
269 |
gttggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttaactcattgcggatggaa |
338 |
Q |
| |
|
|||||||||| || ||| ||||| |||||||| ||||| |||| |||||||| ||||||||||||||||| |
|
|
| T |
4564081 |
gttggtgtccacaggagaaagtattgaaccacccttcaattggcggattcttgactcattgcggatggaa |
4564012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 250 - 338
Target Start/End: Original strand, 4490098 - 4490186
Alignment:
| Q |
250 |
gatagaggaccaatcgcgggttggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttaactcattgcggatggaa |
338 |
Q |
| |
|
|||||||||| ||| || |||||||||| |||||| | ||| |||| ||| ||||| ||||||||||||| |||||||| |||||||| |
|
|
| T |
4490098 |
gatagaggactaatagcaagttggtgtccacaagagaaggtattgaatcacccttcaattggtggattcttgactcattgtggatggaa |
4490186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 338
Target Start/End: Complemental strand, 4516689 - 4516622
Alignment:
| Q |
271 |
tggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttaactcattgcggatggaa |
338 |
Q |
| |
|
||||||||||||||| |||| ||||||| |||||||||| |||||||| |||||||| |||||||| |
|
|
| T |
4516689 |
tggtgtccgcaagagaaagtgttgaaccatccttcagttggaggattcttgactcattgtggatggaa |
4516622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 4558658 - 4558616
Alignment:
| Q |
1 |
tatccagttcaaggccatatcaatccattattcaaactagcaa |
43 |
Q |
| |
|
||||||||||||||||||||||||||||| || |||||||||| |
|
|
| T |
4558658 |
tatccagttcaaggccatatcaatccattgttgaaactagcaa |
4558616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 4569603 - 4569561
Alignment:
| Q |
1 |
tatccagttcaaggccatatcaatccattattcaaactagcaa |
43 |
Q |
| |
|
|||||| ||||||||||||||||||||||||| |||||||||| |
|
|
| T |
4569603 |
tatccacttcaaggccatatcaatccattattgaaactagcaa |
4569561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 4623840 - 4623798
Alignment:
| Q |
1 |
tatccagttcaaggccatatcaatccattattcaaactagcaa |
43 |
Q |
| |
|
|||||||||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
4623840 |
tatccagttcaaggtcatatcaatccattgttcaaactagcaa |
4623798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 338
Target Start/End: Complemental strand, 3172111 - 3172042
Alignment:
| Q |
269 |
gttggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttaactcattgcggatggaa |
338 |
Q |
| |
|
||||||||||||||||| |||| ||||||| ||||| |||| |||||||| ||||| ||||||||||| |
|
|
| T |
3172111 |
gttggtgtccgcaagagaaagtgttgaaccatccttcaattggcggattcttgactcactgcggatggaa |
3172042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 338
Target Start/End: Complemental strand, 4481063 - 4480994
Alignment:
| Q |
269 |
gttggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttaactcattgcggatggaa |
338 |
Q |
| |
|
|||||||||| |||||| |||| |||||||| ||||| | || |||||||| ||||||||||||||||| |
|
|
| T |
4481063 |
gttggtgtccacaagagaaagttttgaaccacccttcaatcggcggattcttgactcattgcggatggaa |
4480994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 342
Target Start/End: Complemental strand, 4617392 - 4617319
Alignment:
| Q |
269 |
gttggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttaactcattgcggatggaattca |
342 |
Q |
| |
|
|||||||||| ||||| |||| |||||||| ||||| | || |||||||| ||||||||||||||||||||| |
|
|
| T |
4617392 |
gttggtgtccacaagacaaagtgttgaaccacccttcaatcggaggattcttgactcattgcggatggaattca |
4617319 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 4258771 - 4258811
Alignment:
| Q |
1 |
tatccagttcaaggccatatcaatccattattcaaactagc |
41 |
Q |
| |
|
||||||| ||||||||||||||||||||| ||||||||||| |
|
|
| T |
4258771 |
tatccagctcaaggccatatcaatccattgttcaaactagc |
4258811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 335
Target Start/End: Original strand, 4391891 - 4391955
Alignment:
| Q |
271 |
tggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttaactcattgcggatg |
335 |
Q |
| |
|
||||||||| ||||||||||| |||||||| ||| | || ||||||||||||| ||||| ||||| |
|
|
| T |
4391891 |
tggtgtccgaaagagcaagtattgaaccacccttgaatttgtggattcttaacgcattgtggatg |
4391955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 3173536 - 3173494
Alignment:
| Q |
1 |
tatccagttcaaggccatatcaatccattattcaaactagcaa |
43 |
Q |
| |
|
|||||||||||||||||||||||| |||| || |||||||||| |
|
|
| T |
3173536 |
tatccagttcaaggccatatcaatgcattgttgaaactagcaa |
3173494 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 4572499 - 4572457
Alignment:
| Q |
1 |
tatccagttcaaggccatatcaatccattattcaaactagcaa |
43 |
Q |
| |
|
||||||||||||||||||||||||||||| || ||||||||| |
|
|
| T |
4572499 |
tatccagttcaaggccatatcaatccattgttgcaactagcaa |
4572457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 4587163 - 4587125
Alignment:
| Q |
3 |
tccagttcaaggccatatcaatccattattcaaactagc |
41 |
Q |
| |
|
||||||||||||||||||||||||||| || |||||||| |
|
|
| T |
4587163 |
tccagttcaaggccatatcaatccattgttgaaactagc |
4587125 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 338
Target Start/End: Complemental strand, 4493325 - 4493256
Alignment:
| Q |
269 |
gttggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttaactcattgcggatggaa |
338 |
Q |
| |
|
|||||||||| |||||| || | ||||||||| ||| ||||||||||||| |||||||| |||||||| |
|
|
| T |
4493325 |
gttggtgtccacaagagaaactgctgaaccaccattcgattggtggattcttgactcattgtggatggaa |
4493256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 338
Target Start/End: Complemental strand, 4506194 - 4506158
Alignment:
| Q |
302 |
cttcagttggtggattcttaactcattgcggatggaa |
338 |
Q |
| |
|
||||| ||||||||||||| ||||||||||||||||| |
|
|
| T |
4506194 |
cttcaattggtggattcttgactcattgcggatggaa |
4506158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 4507436 - 4507404
Alignment:
| Q |
9 |
tcaaggccatatcaatccattattcaaactagc |
41 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| |
|
|
| T |
4507436 |
tcaaggccatatcaatccattgttcaaactagc |
4507404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 150; Significance: 3e-79; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 46 - 338
Target Start/End: Original strand, 4213 - 4517
Alignment:
| Q |
46 |
gaagataccaagtgtcttgaatggcttgaatccaaggaacctgagtctgttgtttacgtgaaattttggcagcatcacagttatgactccagatcaactg |
145 |
Q |
| |
|
|||||||||||||||||||| ||||||| |||||||||||||||||| |||||||| ||||| |||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
4213 |
gaagataccaagtgtcttgagtggcttgcatccaaggaacctgagtcggttgtttatgtgaa-ttttggaagcattacagttatgactccagatcaactg |
4311 |
T |
|
| Q |
146 |
ttagagtttgcttggggattggccaatagcaagaaaccatttttgtggatcattaggcctgacctcgtcattggtggctcctttattttgtcatctgag- |
244 |
Q |
| |
|
|||||||||||||||| ||| ||||| | |||||| | |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |
|
|
| T |
4312 |
ttagagtttgcttgggttttgaccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagt |
4411 |
T |
|
| Q |
245 |
------------tttcggatagaggaccaatcgcgggttggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttaactcattgcgg |
332 |
Q |
| |
|
|||| |||||||| | ||| ||| | |||||||| ||||||||||||||||||||| ||||| ||||||||||||| ||||||||||| |
|
|
| T |
4412 |
ttgagaatgaaatttcagatagaggcctaattgcgagctggtgtccacaagagcaagtactgaaccacccttcaattggtggattcttgactcattgcgg |
4511 |
T |
|
| Q |
333 |
atggaa |
338 |
Q |
| |
|
|||||| |
|
|
| T |
4512 |
atggaa |
4517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 150; Significance: 3e-79; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 46 - 338
Target Start/End: Complemental strand, 3087025 - 3086721
Alignment:
| Q |
46 |
gaagataccaagtgtcttgaatggcttgaatccaaggaacctgagtctgttgtttacgtgaaattttggcagcatcacagttatgactccagatcaactg |
145 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||| || ||||||||||||||| |||| |||||||||||| ||||||||||||| ||| ||||| |
|
|
| T |
3087025 |
gaagataccaagtgtcttgaatggcttgaatcaaagggacttgagtctgttgtttatgtgag-ttttggcagcattacagttatgactcaagagcaacta |
3086927 |
T |
|
| Q |
146 |
ttagagtttgcttggggattggccaatagcaagaaaccatttttgtggatcattaggcctgacctcgtcattggtggctcctttattttgtcatctgag- |
244 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||| ||||||||||| |
|
|
| T |
3086926 |
ttagagtttgcttggggtttggccaatagcaagaaaccatttttgtggatcattaggcctgatcttgtcattggcggctcctttattatgtcatctgagt |
3086827 |
T |
|
| Q |
245 |
------------tttcggatagaggaccaatcgcgggttggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttaactcattgcgg |
332 |
Q |
| |
|
|||| |||||||| | |||||| | ||||||||||||||||||||| |||| ||| ||||| ||||||||||||| |||||||| || |
|
|
| T |
3086826 |
ttgagaaagaaatttcagatagaggtctaatcgcaagctggtgtccgcaagagcaagtattgaatcacccttcaattggtggattcttgactcattgtgg |
3086727 |
T |
|
| Q |
333 |
atggaa |
338 |
Q |
| |
|
|||||| |
|
|
| T |
3086726 |
atggaa |
3086721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 149; Significance: 1e-78; HSPs: 2)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 46 - 342
Target Start/End: Original strand, 3246 - 3554
Alignment:
| Q |
46 |
gaagataccaagtgtcttgaatggcttgaatccaaggaacctgagtctgttgtttacgtgaaattttggcagcatcacagttatgactccagatcaactg |
145 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||| |||||||| ||||||||||||||| |||||||| |
|
|
| T |
3246 |
gaagataccaagtgtcttgaatggctcgaatccaaggaacctgagtctgttgtttatgtgaa-tttcggcagcattacagttatgactccaaatcaactg |
3344 |
T |
|
| Q |
146 |
ttagagtttgcttggggattggccaatagcaagaaaccatttttgtggatcattaggcctgacctcgtcattggtggctcctttattttgtcatc----- |
240 |
Q |
| |
|
||||| ||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||| || |||||||| ||||| |||||||||||||| |
|
|
| T |
3345 |
ttagaatttgcttggggtttggccgatagcaagaaaccgtttttgtggatcattaggcctgatcttgtcattggcggctcgtttattttgtcatcagaat |
3444 |
T |
|
| Q |
241 |
-tgag-------tttcggatagaggaccaatcgcgggttggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttaactcattgcgg |
332 |
Q |
| |
|
|||| |||| |||||||| | |||| | | |||||||| |||||||||||||||| |||| ||||| ||||||||||||| |||||||| || |
|
|
| T |
3445 |
ttgagaatgaaatttcagatagaggcctaatcacaagctggtgtccacaagagcaagtactgatccacccttcaattggtggattcttgactcattgtgg |
3544 |
T |
|
| Q |
333 |
atggaattca |
342 |
Q |
| |
|
|||||||||| |
|
|
| T |
3545 |
atggaattca |
3554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 2046 - 2088
Alignment:
| Q |
1 |
tatccagttcaaggccatatcaatccattattcaaactagcaa |
43 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
2046 |
tatccagttcaaggccatatcaatccattgttcaaactagcaa |
2088 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 90; Significance: 2e-43; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 46 - 247
Target Start/End: Complemental strand, 1674831 - 1674631
Alignment:
| Q |
46 |
gaagataccaagtgtcttgaatggcttgaatccaaggaacctgagtctgttgtttacgtgaaattttggcagcatcacagttatgactccagatcaactg |
145 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| ||||| | || |||||||| ||||| ||| || ||||| | |||||||||||||||||||| |
|
|
| T |
1674831 |
gaagatactgagtgtcttgaatggcttgaatccaacgaaccgggatcggttgtttatgtgaa-tttcggtagcattattgttatgactccagatcaacta |
1674733 |
T |
|
| Q |
146 |
ttagagtttgcttggggattggccaatagcaagaaaccatttttgtggatcattaggcctgacctcgtcattggtggctcctttattttgtcatctgagt |
245 |
Q |
| |
|
|| |||||||||||||| |||||| || |||||||||| ||||||||||||| ||||||||| || |||||||||||||| | ||||||||||||||| |
|
|
| T |
1674732 |
ttggagtttgcttggggtttggccgattgcaagaaaccttttttgtggatcactaggcctgatcttgtcattggtggctcagtggttttgtcatctgagt |
1674633 |
T |
|
| Q |
246 |
tt |
247 |
Q |
| |
|
|| |
|
|
| T |
1674632 |
tt |
1674631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 47 - 338
Target Start/End: Original strand, 16685795 - 16686098
Alignment:
| Q |
47 |
aagataccaagtgtcttgaatggcttgaatccaaggaacctgagt-ctgttgtttacgtgaaattttggcagcatcacagttatgactccagatcaactg |
145 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||| |||| | |||||||| ||||| |||||| ||||| |||||||||||| |||| |||| |
|
|
| T |
16685795 |
aagataccaagtgtcttgattggcttgaatccaaggaacc-gagttccgttgtttatgtgaa-ttttgggagcatgacagttatgactgcagaaaaacta |
16685892 |
T |
|
| Q |
146 |
ttagagtttgcttggggattggccaatagcaagaaaccatttttgtggatcattaggcctgacctcgtcattggtggctcctttattttgtcatctgagt |
245 |
Q |
| |
|
||||||||||||||||| ||| ||||||||||| ||| ||| |||||||||||| |||| || |||||| | || ||| | ||||||||||||||| |
|
|
| T |
16685893 |
ttagagtttgcttggggtttgaccaatagcaagcaacattttcaatggatcattaggtctgatcttgtcatttgcggttccgtggttttgtcatctgagt |
16685992 |
T |
|
| Q |
246 |
t-------------tcggatagaggaccaatcgcgggttggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttaactcattgcgg |
332 |
Q |
| |
|
| || |||||| | | ||||||| | ||||| ||||||||||||||| | ||||| ||||| | |||||||||||||||||||| || |
|
|
| T |
16685993 |
ttaagaatgaaatctcagatagaagcctaatcgcgagctggtgcccgcaagagcaagtattaaaccatccttcaatcggtggattcttaactcattgtgg |
16686092 |
T |
|
| Q |
333 |
atggaa |
338 |
Q |
| |
|
|||||| |
|
|
| T |
16686093 |
atggaa |
16686098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 58 - 247
Target Start/End: Original strand, 20863382 - 20863570
Alignment:
| Q |
58 |
tgtcttgaatggcttgaatccaaggaacctgagtctgttgtttacgtgaaattttggcagcatcacagttatgactccagatcaactgttagagtttgct |
157 |
Q |
| |
|
||||||| |||||||||||| || ||||| | ||| |||| || || |||||||||||| | |||||| ||| || ||| || ||||||||||||| |
|
|
| T |
20863382 |
tgtcttgcatggcttgaatcgaaagaaccgggatctattgtatatgt-aaattttggcagtaccacagtcatgtctgtagaaaaattgttagagtttgca |
20863480 |
T |
|
| Q |
158 |
tggggattggccaatagcaagaaaccatttttgtggatcattaggcctgacctcgtcattggtggctcctttattttgtcatctgagttt |
247 |
Q |
| |
|
||||| |||||||| ||||||||||| ||||||||||||||||||||||| || |||||||||||||| | ||||| ||||||| |||| |
|
|
| T |
20863481 |
tggggtttggccaacagcaagaaaccctttttgtggatcattaggcctgatcttgtcattggtggctcggtgattttttcatctgcgttt |
20863570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 1676054 - 1676012
Alignment:
| Q |
1 |
tatccagttcaaggccatatcaatccattattcaaactagcaa |
43 |
Q |
| |
|
||||||| ||||||||||||||||||||| ||||||||||||| |
|
|
| T |
1676054 |
tatccagctcaaggccatatcaatccattgttcaaactagcaa |
1676012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 83; Significance: 3e-39; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 46 - 338
Target Start/End: Complemental strand, 1281719 - 1281415
Alignment:
| Q |
46 |
gaagataccaagtgtcttgaatggcttgaatccaaggaacctgag-tctgttgtttacgtgaaattttggcagcatcacagttatgactccagatcaact |
144 |
Q |
| |
|
||||||| | |||||||| ||||||||||||| |||||||| ||| ||||||||||| ||||| ||| || ||||| ||||||||||||||||| ||||| |
|
|
| T |
1281719 |
gaagatatcgagtgtcttcaatggcttgaatcgaaggaacc-gagatctgttgtttatgtgaa-tttcggaagcattacagttatgactccagagcaact |
1281622 |
T |
|
| Q |
145 |
gttagagtttgcttggggattggccaatagcaagaaaccatttttgtggatcattaggcctgacctcgtcattggtggctcctttattttgtcatctg-- |
242 |
Q |
| |
|
|| ||||||||||| |||| |||||||||||||||||||||||||||| ||||||||| || |||||||| ||||| | ||||||||||||| |
|
|
| T |
1281621 |
tcaggaatttgcttggggtctggctaatagcaagaaaccatttttgtggatcactaggcctgatcttgtcattggcggctcagtgattttgtcatctgac |
1281522 |
T |
|
| Q |
243 |
-----------agtttcggatagaggaccaatcgcgggttggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttaactcattgcg |
331 |
Q |
| |
|
| |||| |||||||| | ||| || |||||||||| |||||| |||| |||||||| ||||| | ||||||||||| |||||||||| |
|
|
| T |
1281521 |
tttgcgaatgaaatttcagatagaggcctaatagcaagttggtgtccacaagagaaagtgttgaaccacccttcaatcggtggattcttgactcattgcg |
1281422 |
T |
|
| Q |
332 |
gatggaa |
338 |
Q |
| |
|
||||||| |
|
|
| T |
1281421 |
gatggaa |
1281415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 1282966 - 1282924
Alignment:
| Q |
1 |
tatccagttcaaggccatatcaatccattattcaaactagcaa |
43 |
Q |
| |
|
||||||| ||||||||||||||||||||| ||||||||||||| |
|
|
| T |
1282966 |
tatccagctcaaggccatatcaatccattgttcaaactagcaa |
1282924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 78; Significance: 3e-36; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 46 - 338
Target Start/End: Complemental strand, 24103604 - 24103300
Alignment:
| Q |
46 |
gaagataccaagtgtcttgaatggcttgaatccaaggaacctgagtctgttgtttacgtgaaattttggcagcatcacagttatgactccagatcaactg |
145 |
Q |
| |
|
|||||||| || |||||||| ||||||||||| || ||||| || |||||||| || ||||||||| ||||||||||||||| | | ||| | || |
|
|
| T |
24103604 |
gaagatactaaatgtcttgagtggcttgaatcaaaagaaccaagatcagttgtttatgt-aaattttggtagcatcacagttatgtcacgagagaagctc |
24103506 |
T |
|
| Q |
146 |
ttagagtttgcttggggattggccaatagcaagaaaccatttttgtggatcattaggcctgacctcgtcattggtggctcctttattttgtcatctg--- |
242 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||| || |||||||| ||||| || |||||||||||| |
|
|
| T |
24103505 |
ttagagtttgcttggggtttggccaatagcaagaacccttttttgtggataattaggcctgatcttgtcattgggggctcagttgttttgtcatctgatt |
24103406 |
T |
|
| Q |
243 |
----------agtttcggatagaggaccaatcgcgggttggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttaactcattgcgg |
332 |
Q |
| |
|
|||||| |||||||||| ||| || |||||||||| ||||| |||| | |||||| |||| ||||||||||||| ||||||||||| |
|
|
| T |
24103405 |
tttttaaagaagtttcagatagaggactaatagcaagttggtgtccacaagataaagtgttaaaccacccttcgattggtggattcttgactcattgcgg |
24103306 |
T |
|
| Q |
333 |
atggaa |
338 |
Q |
| |
|
|||||| |
|
|
| T |
24103305 |
atggaa |
24103300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 166 - 247
Target Start/End: Original strand, 27999745 - 27999826
Alignment:
| Q |
166 |
ggccaatagcaagaaaccatttttgtggatcattaggcctgacctcgtcattggtggctcctttattttgtcatctgagttt |
247 |
Q |
| |
|
||||||| |||||||||| ||||||||||||| ||||||| | || |||||||||||||| | ||||||||||||||||| |
|
|
| T |
27999745 |
ggccaattgcaagaaaccttttttgtggatcactaggcctaatcttgtcattggtggctcagtggttttgtcatctgagttt |
27999826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 107
Target Start/End: Complemental strand, 24107011 - 24106974
Alignment:
| Q |
70 |
cttgaatccaaggaacctgagtctgttgtttacgtgaa |
107 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| ||||| |
|
|
| T |
24107011 |
cttgaatccaaggaacctgagtttgttgtttatgtgaa |
24106974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 2357 - 2315
Alignment:
| Q |
1 |
tatccagttcaaggccatatcaatccattattcaaactagcaa |
43 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2357 |
tatccagttcaaggccatatcaatccattattcaaactagcaa |
2315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 338
Target Start/End: Original strand, 3449 - 3515
Alignment:
| Q |
271 |
tggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttaactcattgcggatggaa |
338 |
Q |
| |
|
||||||||| |||||||||| |||||||| ||| |||||||||||||||||||||||| |||||||| |
|
|
| T |
3449 |
tggtgtccgtaagagcaagtgttgaaccaccctt-agttggtggattcttaactcattgtggatggaa |
3515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 3162 - 3208
Alignment:
| Q |
173 |
agcaagaaaccatttttgtggatcattaggcctgacctcgtcattgg |
219 |
Q |
| |
|
||||||||||| ||| |||||||||||||| ||||||| |||||||| |
|
|
| T |
3162 |
agcaagaaaccctttgtgtggatcattaggtctgaccttgtcattgg |
3208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0199 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0199
Description:
Target: scaffold0199; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 1291 - 1249
Alignment:
| Q |
1 |
tatccagttcaaggccatatcaatccattattcaaactagcaa |
43 |
Q |
| |
|
||||||| ||||||||||||||||||||| ||||||||||||| |
|
|
| T |
1291 |
tatccagctcaaggccatatcaatccattgttcaaactagcaa |
1249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0199; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 107
Target Start/End: Complemental strand, 68 - 7
Alignment:
| Q |
46 |
gaagataccaagtgtcttgaatggcttgaatccaaggaacctgagtctgttgtttacgtgaa |
107 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| ||||| | || |||||||| ||||| |
|
|
| T |
68 |
gaagatactgagtgtcttgaatggcttgaatccaacgaaccgggatcggttgtttatgtgaa |
7 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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