View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15512_low_16 (Length: 246)

Name: NF15512_low_16
Description: NF15512
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15512_low_16
NF15512_low_16
[»] chr6 (21 HSPs)
chr6 (1-217)||(20155673-20155890)
chr6 (1-217)||(22176942-22177159)
chr6 (122-217)||(12964226-12964320)
chr6 (3-214)||(20133957-20134171)
chr6 (3-214)||(22198698-22198912)
chr6 (162-217)||(20424135-20424190)
chr6 (126-208)||(26662800-26662883)
chr6 (126-208)||(26768771-26768854)
chr6 (149-217)||(14854220-14854288)
chr6 (1-205)||(16997939-16998147)
chr6 (1-73)||(4453907-4453979)
chr6 (126-208)||(5868271-5868354)
chr6 (126-208)||(26798338-26798421)
chr6 (126-208)||(28977335-28977418)
chr6 (2-113)||(24376262-24376373)
chr6 (161-215)||(923893-923947)
chr6 (153-202)||(24376168-24376217)
chr6 (1-49)||(2649867-2649915)
chr6 (1-49)||(29544589-29544637)
chr6 (1-49)||(29560000-29560048)
chr6 (1-49)||(31545794-31545842)
[»] chr1 (13 HSPs)
chr1 (1-205)||(47663263-47663470)
chr1 (122-215)||(20456172-20456264)
chr1 (122-215)||(20541420-20541512)
chr1 (122-217)||(9193266-9193360)
chr1 (162-217)||(15816733-15816788)
chr1 (1-109)||(16558144-16558252)
chr1 (173-215)||(5137233-5137275)
chr1 (161-215)||(16230272-16230326)
chr1 (1-49)||(10938632-10938680)
chr1 (1-49)||(10957824-10957872)
chr1 (1-49)||(10973048-10973096)
chr1 (1-49)||(30727146-30727194)
chr1 (1-49)||(36088300-36088348)
[»] chr8 (7 HSPs)
chr8 (122-217)||(28504235-28504329)
chr8 (162-217)||(25746504-25746559)
chr8 (1-109)||(3996765-3996873)
chr8 (1-113)||(40007432-40007544)
chr8 (1-49)||(18686159-18686207)
chr8 (161-215)||(15017670-15017724)
chr8 (126-208)||(18686286-18686369)
[»] chr7 (14 HSPs)
chr7 (122-217)||(34194119-34194213)
chr7 (122-217)||(34196507-34196601)
chr7 (1-218)||(18137179-18137399)
chr7 (1-218)||(23831396-23831616)
chr7 (122-217)||(10839760-10839855)
chr7 (1-109)||(26497845-26497953)
chr7 (1-109)||(26600077-26600185)
chr7 (1-110)||(24891915-24892024)
chr7 (1-113)||(21997728-21997840)
chr7 (126-208)||(22149570-22149653)
chr7 (1-73)||(11026788-11026860)
chr7 (53-113)||(16499067-16499127)
chr7 (53-113)||(16508362-16508422)
chr7 (53-113)||(16523478-16523538)
[»] chr4 (11 HSPs)
chr4 (1-205)||(5316712-5316919)
chr4 (1-205)||(35057326-35057533)
chr4 (137-215)||(12785187-12785264)
chr4 (122-208)||(15386853-15386938)
chr4 (1-73)||(14749289-14749361)
chr4 (1-73)||(14768392-14768464)
chr4 (122-187)||(14240390-14240455)
chr4 (161-215)||(18465602-18465656)
chr4 (122-202)||(15082112-15082193)
chr4 (53-113)||(18043533-18043593)
chr4 (1-49)||(43151591-43151639)
[»] chr3 (35 HSPs)
chr3 (1-205)||(18325770-18325977)
chr3 (1-205)||(18340869-18341076)
chr3 (1-205)||(32964548-32964755)
chr3 (1-218)||(17904368-17904588)
chr3 (1-205)||(4716729-4716936)
chr3 (1-205)||(4731909-4732116)
chr3 (1-205)||(6212178-6212385)
chr3 (122-217)||(10930253-10930347)
chr3 (162-217)||(9095917-9095972)
chr3 (1-208)||(26685471-26685681)
chr3 (1-205)||(6187411-6187618)
chr3 (162-217)||(15476347-15476402)
chr3 (126-208)||(10638021-10638104)
chr3 (126-208)||(10652999-10653082)
chr3 (122-217)||(28166453-28166548)
chr3 (51-202)||(19088750-19088904)
chr3 (1-49)||(3066634-3066682)
chr3 (1-73)||(18282183-18282255)
chr3 (1-73)||(18297484-18297556)
chr3 (1-73)||(18312785-18312857)
chr3 (1-49)||(22492349-22492397)
chr3 (1-49)||(43717862-43717910)
chr3 (161-215)||(16615314-16615368)
chr3 (161-215)||(18922174-18922228)
chr3 (161-215)||(22051492-22051546)
chr3 (161-215)||(29942215-29942269)
chr3 (161-215)||(29991369-29991423)
chr3 (153-202)||(15364675-15364724)
chr3 (1-49)||(5586045-5586093)
chr3 (1-49)||(5620265-5620313)
chr3 (1-49)||(6227510-6227558)
chr3 (126-208)||(7991513-7991596)
chr3 (53-113)||(15882738-15882798)
chr3 (53-113)||(15897916-15897976)
chr3 (1-49)||(26428272-26428320)
[»] chr2 (14 HSPs)
chr2 (1-205)||(4727688-4727895)
chr2 (1-205)||(15713899-15714106)
chr2 (122-217)||(29438928-29439022)
chr2 (122-217)||(17259777-17259872)
chr2 (122-217)||(18085341-18085436)
chr2 (162-217)||(22699648-22699703)
chr2 (1-110)||(26149950-26150059)
chr2 (126-205)||(13818990-13819071)
chr2 (1-73)||(15706082-15706154)
chr2 (1-49)||(9355060-9355108)
chr2 (53-113)||(20831113-20831173)
chr2 (1-49)||(27214544-27214592)
chr2 (53-113)||(27424580-27424640)
chr2 (53-113)||(27439624-27439684)
[»] chr5 (19 HSPs)
chr5 (12-205)||(22988865-22989061)
chr5 (12-205)||(23003932-23004128)
chr5 (162-217)||(37295217-37295272)
chr5 (126-208)||(23396949-23397032)
chr5 (162-215)||(25210380-25210433)
chr5 (162-215)||(25274535-25274588)
chr5 (126-208)||(9540795-9540878)
chr5 (126-208)||(9553668-9553751)
chr5 (173-215)||(25194970-25195012)
chr5 (173-217)||(20580563-20580607)
chr5 (1-49)||(42138084-42138132)
chr5 (161-215)||(19864252-19864306)
chr5 (161-215)||(21500824-21500878)
chr5 (153-202)||(30466319-30466368)
chr5 (126-208)||(13175336-13175419)
chr5 (126-208)||(13187681-13187764)
chr5 (53-113)||(24947139-24947199)
chr5 (53-113)||(24980004-24980064)
chr5 (1-73)||(37727141-37727213)
[»] scaffold0143 (1 HSPs)
scaffold0143 (122-217)||(22350-22445)
[»] scaffold0211 (1 HSPs)
scaffold0211 (162-217)||(11478-11533)
[»] scaffold0127 (1 HSPs)
scaffold0127 (162-217)||(26111-26166)
[»] scaffold0252 (1 HSPs)
scaffold0252 (1-205)||(591-798)
[»] scaffold0131 (1 HSPs)
scaffold0131 (126-217)||(24713-24804)
[»] scaffold1179 (1 HSPs)
scaffold1179 (1-73)||(431-503)
[»] scaffold0062 (1 HSPs)
scaffold0062 (1-73)||(54994-55066)
[»] scaffold0393 (1 HSPs)
scaffold0393 (52-202)||(6534-6687)
[»] scaffold0134 (1 HSPs)
scaffold0134 (122-202)||(22831-22913)
[»] scaffold0667 (1 HSPs)
scaffold0667 (1-49)||(7462-7510)


Alignment Details
Target: chr6 (Bit Score: 76; Significance: 3e-35; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 20155890 - 20155673
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagattagcaaggacacattcaagcaaagtactataccaaacttataaagatattttg 100  Q
    |||| ||||| ||||||||| ||||||||||||||||||||||| ||||  |  ||||||| |||||||||||  | |||||| | ||| ||| ||||      
T  20155890 tcatggcaattttgaaagagattttatttcaagccatgacatgaaattaatagagacacatgcaagcaaagtatcacaccaaattcatagagagatttga 20155791  T
Q  101 cactttatttcttnnnnnnnncacat--tgcttgcaaaacaagaaatttgcaaatcacatccaaaaacagtaagacaaacacatgatcagaggcatattc 198  Q
    |||||||||||||        |||||  ||||||||||||||||||||| |||||||||||| |||||||||| | ||||||||||||||| ||||||||    
T  20155790 cactttatttcttaagacaaacacatattgcttgcaaaacaagaaatttacaaatcacatcc-aaaacagtaaaaaaaacacatgatcagatgcatattc 20155692  T
Q  199 atcacaagatggcatatca 217  Q
    |||| || || ||||||||    
T  20155691 atcataatattgcatatca 20155673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 22176942 - 22177159
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagattagcaaggacacattcaagcaaagtactataccaaacttataaagatattttg 100  Q
    |||| ||||| ||||||||| ||||||||||||||||||||||| ||||  |  ||||||| |||||||||||  | |||||| | ||| ||| ||||      
T  22176942 tcatggcaattttgaaagagattttatttcaagccatgacatgaaattaatagagacacatgcaagcaaagtatcacaccaaattcatagagagatttga 22177041  T
Q  101 cactttatttcttnnnnnnnncacat--tgcttgcaaaacaagaaatttgcaaatcacatccaaaaacagtaagacaaacacatgatcagaggcatattc 198  Q
    |||||||||||||        |||||  ||||||||||||||||||||| |||||||||||| |||||||||| | ||||||||||||||| ||||||||    
T  22177042 cactttatttcttaagacaaacacatattgcttgcaaaacaagaaatttacaaatcacatcc-aaaacagtaaaaaaaacacatgatcagatgcatattc 22177140  T
Q  199 atcacaagatggcatatca 217  Q
    |||| || || ||||||||    
T  22177141 atcataatattgcatatca 22177159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 122 - 217
Target Start/End: Original strand, 12964226 - 12964320
Alignment:
Q  122 cacattgcttgcaaaacaagaaatttgcaaatcacatccaaaaacagtaagacaaacacatgatcagaggcatattcatcacaagatggcatatca 217  Q
    |||||| ||||||| |||||||| |  ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||    
T  12964226 cacattacttgcaacacaagaaactaacaaatcacatc-aaaaacagtaaaacaaacacatgatcagaggcatattcatcacaaaatagcatatca 12964320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 214
Target Start/End: Complemental strand, 20134171 - 20133957
Alignment:
Q  3 atagcaatcttgaaagaggttttatttcaagccatgacatgagattagcaaggacacattcaagcaaagtactataccaaacttataaagatattttgca 102  Q
    |||||||  ||| ||| |||||||||| ||||||| |  ||||| || ||||||||||||||||  ||| | |||||||   ||||| ||||||||||||    
T  20134171 atagcaactttggaaggggttttattttaagccataatgtgagaataacaaggacacattcaagtcaagaattataccatgtttatagagatattttgca 20134072  T
Q  103 ctttatttctt--nnnnnnnncacattgcttgcaaaacaagaaatttgcaaatcacatc-caaaaacagtaagacaaacacatgatcagaggcatattca 199  Q
    |||||||||||          |||||| ||||||||||||||||||   || | ||||| ||  |||||||| ||| ||| |||||||||||||||||||    
T  20134071 ctttatttcttgagaaaaacacacattacttgcaaaacaagaaattgaaaatttacatcacatgaacagtaaaacacacatatgatcagaggcatattca 20133972  T
Q  200 tcacaagatggcata 214  Q
    |||||| || |||||    
T  20133971 tcacaaaattgcata 20133957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 214
Target Start/End: Original strand, 22198698 - 22198912
Alignment:
Q  3 atagcaatcttgaaagaggttttatttcaagccatgacatgagattagcaaggacacattcaagcaaagtactataccaaacttataaagatattttgca 102  Q
    |||||||  ||| ||| |||||||||| ||||||| |  ||||| || ||||||||||||||||  ||| | |||||||   ||||| ||||||||||||    
T  22198698 atagcaactttggaaggggttttattttaagccataatgtgagaataacaaggacacattcaagtcaagaattataccatgtttatagagatattttgca 22198797  T
Q  103 ctttatttctt--nnnnnnnncacattgcttgcaaaacaagaaatttgcaaatcacatc-caaaaacagtaagacaaacacatgatcagaggcatattca 199  Q
    |||||||||||          |||||| ||||||||||||||||||   || | ||||| ||  |||||||| ||| ||| |||||||||||||||||||    
T  22198798 ctttatttcttgagaaaaacacacattacttgcaaaacaagaaattgaaaatttacatcacatgaacagtaaaacacacatatgatcagaggcatattca 22198897  T
Q  200 tcacaagatggcata 214  Q
    |||||| || |||||    
T  22198898 tcacaaaattgcata 22198912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 217
Target Start/End: Complemental strand, 20424190 - 20424135
Alignment:
Q  162 aaaacagtaagacaaacacatgatcagaggcatattcatcacaagatggcatatca 217  Q
    |||||||||| ||||||||||||||||||||||||||||||||| || ||||||||    
T  20424190 aaaacagtaaaacaaacacatgatcagaggcatattcatcacaaaattgcatatca 20424135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 208
Target Start/End: Original strand, 26662800 - 26662883
Alignment:
Q  126 ttgcttgcaaaacaagaaatttgcaaa-tcacatccaaaaac-agtaagacaaacacatgatcagaggcatattcatcacaagat 208  Q
    |||||||||||||||||||||| |||| ||| |||||||||| || |||| || ||||||| |||||||||||||||||||||||    
T  26662800 ttgcttgcaaaacaagaaatttacaaaatcatatccaaaaaccagcaaga-aagcacatgaccagaggcatattcatcacaagat 26662883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 208
Target Start/End: Original strand, 26768771 - 26768854
Alignment:
Q  126 ttgcttgcaaaacaagaaatttgcaaa-tcacatccaaaaac-agtaagacaaacacatgatcagaggcatattcatcacaagat 208  Q
    |||||||||||||||||||||| |||| ||| |||||||||| || |||| || ||||||| |||||||||||||||||||||||    
T  26768771 ttgcttgcaaaacaagaaatttacaaaatcatatccaaaaaccagcaaga-aagcacatgaccagaggcatattcatcacaagat 26768854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 14854288 - 14854220
Alignment:
Q  149 caaatcacatccaaaaacagtaaga-caaacacatgatcagaggcatattcatcacaagatggcatatca 217  Q
    ||||||||||| ||||||||||| | ||||||||||||||||||| |||||||||||| || ||||||||    
T  14854288 caaatcacatc-aaaaacagtaaaaacaaacacatgatcagaggcgtattcatcacaaaatagcatatca 14854220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 16998147 - 16997939
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagattagcaaggacacattcaagcaaagtactataccaaacttataaagatattttg 100  Q
    |||| ||||| ||||||||| |||| |||||||||||||||||| || | ||  ||||||| |||||||||||  | |||||| | ||| ||| ||||      
T  16998147 tcatggcaattttgaaagagattttgtttcaagccatgacatgaaatcaacagagacacatacaagcaaagtatcacaccaaattcatagagaaatttga 16998048  T
Q  101 cactttatttcttnnnnnnnncac--attgcttgcaaaacaagaaatttgc-aaatcacatcc-aaaaacagtaagacaaacacatgatcagaggcatat 196  Q
    ||||||||| |||        |||   |||||||||||||||||||||| | |||||| |||| |||||||| || |   |||||||| ||||||||| |    
T  16998047 cactttattccttaagacaaacacttgttgcttgcaaaacaagaaatttacaaaatcatatccaaaaaacagcaaaaaggacacatgaccagaggcattt 16997948  T
Q  197 tcatcacaa 205  Q
    |||||||||    
T  16997947 tcatcacaa 16997939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 4453979 - 4453907
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagattagcaaggacacattcaagcaaagta 73  Q
    |||||||||| ||||||||| |||| |||||||||||||||||| ||||  |  ||||||| |||||||||||    
T  4453979 tcatagcaattttgaaagagattttgtttcaagccatgacatgaaattaatagagacacatgcaagcaaagta 4453907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 126 - 208
Target Start/End: Complemental strand, 5868354 - 5868271
Alignment:
Q  126 ttgcttgcaaaacaagaaatttgcaaa-tcacatccaaaaac-agtaagacaaacacatgatcagaggcatattcatcacaagat 208  Q
    |||||||||||||||||||||| |||| ||||| |||||||| || |||| || ||||||| ||||||||||||||||| |||||    
T  5868354 ttgcttgcaaaacaagaaatttacaaaatcacacccaaaaaccagcaaga-aagcacatgaccagaggcatattcatcataagat 5868271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 126 - 208
Target Start/End: Original strand, 26798338 - 26798421
Alignment:
Q  126 ttgcttgcaaaacaagaaatttgc-aaatcacatccaaaaa-cagtaagacaaacacatgatcagaggcatattcatcacaagat 208  Q
    |||||||||||||||||||||| | |||||| ||||||||| ||| |||| || ||||||| ||||| |||||||||||||||||    
T  26798338 ttgcttgcaaaacaagaaatttacaaaatcatatccaaaaaccagcaaga-aagcacatgaccagagacatattcatcacaagat 26798421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 126 - 208
Target Start/End: Original strand, 28977335 - 28977418
Alignment:
Q  126 ttgcttgcaaaacaagaaatttgc-aaatcacatccaaaaa-cagtaagacaaacacatgatcagaggcatattcatcacaagat 208  Q
    |||||||||||||||||||||| | |||||| ||||||||| ||| |||| || ||||||| ||||||||||||||||| |||||    
T  28977335 ttgcttgcaaaacaagaaatttacaaaatcatatccaaaaaccagcaaga-aagcacatgaccagaggcatattcatcataagat 28977418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 24376373 - 24376262
Alignment:
Q  2 catagcaatcttgaaagaggttttatttcaagccatgacatgagattagcaaggacacattcaagcaaagtactataccaaacttataaagatattttgc 101  Q
    ||||||||| || |||||||||| |||| |||| || |  ||||| || ||||||||||||||||| ||| | |||| || | | ||| ||||||||| |    
T  24376373 catagcaatttttaaagaggtttgattttaagctataatgtgagaataacaaggacacattcaagccaagcattataacacattcatagagatattttac 24376274  T
Q  102 actttatttctt 113  Q
    ||||||||||||    
T  24376273 actttatttctt 24376262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 215
Target Start/End: Complemental strand, 923947 - 923893
Alignment:
Q  161 aaaaacagtaagacaaacacatgatcagaggcatattcatcacaagatggcatat 215  Q
    ||||||||||| |||| || ||||||||  |||||||||||||||||| ||||||    
T  923947 aaaaacagtaacacaagcatatgatcagtagcatattcatcacaagattgcatat 923893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 24376217 - 24376168
Alignment:
Q  153 tcacatccaaaaacagtaagacaaacacatgatcagaggcatattcatca 202  Q
    ||||||||| ||||||||| ||| ||| |||||||||| |||||||||||    
T  24376217 tcacatccacaaacagtaaaacacacatatgatcagagacatattcatca 24376168  T

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Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 2649867 - 2649915
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagatta 49  Q
    |||||||||  ||||||||| |||| |||||||||||||||||| ||||    
T  2649867 tcatagcaactttgaaagagattttgtttcaagccatgacatgaaatta 2649915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 29544637 - 29544589
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagatta 49  Q
    |||| ||||| ||||||||| |||| |||||||||||||||||| ||||    
T  29544637 tcatggcaattttgaaagagattttgtttcaagccatgacatgaaatta 29544589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 29560048 - 29560000
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagatta 49  Q
    |||| ||||| ||||||||| |||| |||||||||||||||||| ||||    
T  29560048 tcatggcaattttgaaagagattttgtttcaagccatgacatgaaatta 29560000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 31545842 - 31545794
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagatta 49  Q
    |||| ||||| ||||||||| |||| |||||||||||||||||| ||||    
T  31545842 tcatggcaattttgaaagagattttgtttcaagccatgacatgaaatta 31545794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 1e-28; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 47663263 - 47663470
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagattagcaaggacacattcaagcaaagtactataccaaacttataaagatattttg 100  Q
    |||| ||||| ||||||||| |||| |||||||||||||||||| ||||  |  ||||||| |||||||||||  | |||||| | ||| ||| |||| |    
T  47663263 tcatggcaattttgaaagagattttgtttcaagccatgacatgaaattaatagagacacatgcaagcaaagtatcacaccaaattcatagagaaatttgg 47663362  T
Q  101 cactttatttcttnnnnnnnncac--attgcttgcaaaacaagaaatttgcaaa-tcacatccaaaaacagtaagacaaacacatgatcagaggcatatt 197  Q
    ||||||||| |||        |||  |||| |||||||||||||||||| |||| |||||||||||||||| || | | |||||||||||||||||||||    
T  47663363 cactttattccttaagacaaacacttattgtttgcaaaacaagaaatttacaaaatcacatccaaaaacagcaaaaaagacacatgatcagaggcatatt 47663462  T
Q  198 catcacaa 205  Q
    ||||||||    
T  47663463 catcacaa 47663470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 215
Target Start/End: Complemental strand, 20456264 - 20456172
Alignment:
Q  122 cacattgcttgcaaaacaagaaatttgcaaatcacatccaaaaacagtaagacaaacacatgatcagaggcatattcatcacaagatggcatat 215  Q
    |||||| |||| || ||||||||||  ||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  20456264 cacattacttgaaacacaagaaattaacaaatcacatctaaaa-cagtaaaacaaacacatgatcagaggcatattcatcacaagattgcatat 20456172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 215
Target Start/End: Complemental strand, 20541512 - 20541420
Alignment:
Q  122 cacattgcttgcaaaacaagaaatttgcaaatcacatccaaaaacagtaagacaaacacatgatcagaggcatattcatcacaagatggcatat 215  Q
    |||||| |||| || ||||||||||  ||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  20541512 cacattacttgaaacacaagaaattaacaaatcacatctaaaa-cagtaaaacaaacacatgatcagaggcatattcatcacaagattgcatat 20541420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 217
Target Start/End: Original strand, 9193266 - 9193360
Alignment:
Q  122 cacattgcttgcaaaacaagaaatttgcaaatcacatccaaaaacagtaagacaaacacatgatcagaggcatattcatcacaagatggcatatca 217  Q
    |||||| ||||||| |||||||| |  ||||||||||| | ||||||||| |||||||||||||||||||||||| ||||| || || ||||||||    
T  9193266 cacattacttgcaacacaagaaactaacaaatcacatc-ataaacagtaaaacaaacacatgatcagaggcatatccatcataaaattgcatatca 9193360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 15816733 - 15816788
Alignment:
Q  162 aaaacagtaagacaaacacatgatcagaggcatattcatcacaagatggcatatca 217  Q
    |||||||||| ||||||||||||||||||||||||||||||||| || ||||||||    
T  15816733 aaaacagtaaaacaaacacatgatcagaggcatattcatcacaaaattgcatatca 15816788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 16558144 - 16558252
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagattagcaaggacacattcaagcaaagtactataccaaacttataaagatattttg 100  Q
    |||| ||||| ||||||||| |||| | |||||||||||||||| ||||  | |||||||| |||||||||||| |||||||| | ||| ||| ||||      
T  16558144 tcatggcaattttgaaagagattttgtgtcaagccatgacatgaaattaatagggacacatgcaagcaaagtaccataccaaattcatagagaaatttga 16558243  T
Q  101 cactttatt 109  Q
    |||||||||    
T  16558244 cactttatt 16558252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 215
Target Start/End: Complemental strand, 5137275 - 5137233
Alignment:
Q  173 acaaacacatgatcagaggcatattcatcacaagatggcatat 215  Q
    ||||||||||||| |||||||||||||||||||||| ||||||    
T  5137275 acaaacacatgattagaggcatattcatcacaagattgcatat 5137233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 215
Target Start/End: Complemental strand, 16230326 - 16230272
Alignment:
Q  161 aaaaacagtaagacaaacacatgatcagaggcatattcatcacaagatggcatat 215  Q
    ||||||||||| |||| || ||||||||  |||||||||||||||||| ||||||    
T  16230326 aaaaacagtaacacaagcatatgatcagtagcatattcatcacaagattgcatat 16230272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 10938680 - 10938632
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagatta 49  Q
    |||||||||  ||||||||| |||| |||||||||||||||||| ||||    
T  10938680 tcatagcaactttgaaagagattttgtttcaagccatgacatgaaatta 10938632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 10957872 - 10957824
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagatta 49  Q
    |||||||||  ||||||||| |||| |||||||||||||||||| ||||    
T  10957872 tcatagcaactttgaaagagattttgtttcaagccatgacatgaaatta 10957824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 10973096 - 10973048
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagatta 49  Q
    |||||||||  ||||||||| |||| |||||||||||||||||| ||||    
T  10973096 tcatagcaactttgaaagagattttgtttcaagccatgacatgaaatta 10973048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 30727146 - 30727194
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagatta 49  Q
    |||||||||| |||||||||  ||| |||||||||||||||||| ||||    
T  30727146 tcatagcaattttgaaagagactttgtttcaagccatgacatgaaatta 30727194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 36088300 - 36088348
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagatta 49  Q
    |||||||||  ||||||||| |||| |||||||||||||||||| ||||    
T  36088300 tcatagcaactttgaaagagattttgtttcaagccatgacatgaaatta 36088348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 3e-23; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 122 - 217
Target Start/End: Original strand, 28504235 - 28504329
Alignment:
Q  122 cacattgcttgcaaaacaagaaatttgcaaatcacatccaaaaacagtaagacaaacacatgatcagaggcatattcatcacaagatggcatatca 217  Q
    |||||| ||||||| |||||||| |  ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||    
T  28504235 cacattacttgcaacacaagaaactaacaaatcacatc-aaaaacagtaaaacaaacacatgatcagaggcatattcatcacaaaatagcatatca 28504329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 217
Target Start/End: Complemental strand, 25746559 - 25746504
Alignment:
Q  162 aaaacagtaagacaaacacatgatcagaggcatattcatcacaagatggcatatca 217  Q
    |||||||||| ||||||||||||||||||||||||||||||||| || ||||||||    
T  25746559 aaaacagtaaaacaaacacatgatcagaggcatattcatcacaaaattgcatatca 25746504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 3996873 - 3996765
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagattagcaaggacacattcaagcaaagtactataccaaacttataaagatattttg 100  Q
    |||| ||||| ||||||||| |||| |||||||||||||||||| ||||  |  ||||||| |||||||||||  |||||||| | ||| ||| ||||      
T  3996873 tcatggcaattttgaaagagattttgtttcaagccatgacatgaaattaatagagacacatgcaagcaaagtatcataccaaattcatagagaaatttga 3996774  T
Q  101 cactttatt 109  Q
    |||||||||    
T  3996773 cactttatt 3996765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 40007432 - 40007544
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagattagcaaggacacattcaagcaaagtactataccaaacttataaagatattttg 100  Q
    |||||||||| ||||||||| |||| |||||||||||||||||| ||||     ||||||| |||||||||||  | |||||| | ||| ||| ||||      
T  40007432 tcatagcaattttgaaagagattttgtttcaagccatgacatgaaattaatggagacacatgcaagcaaagtatcacaccaaattcatagagaaatttga 40007531  T
Q  101 cactttatttctt 113  Q
    |||||||||||||    
T  40007532 cactttatttctt 40007544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 18686159 - 18686207
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagatta 49  Q
    |||||||||| ||||||||| |||| |||||||||||||||||| ||||    
T  18686159 tcatagcaattttgaaagagattttgtttcaagccatgacatgaaatta 18686207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 215
Target Start/End: Complemental strand, 15017724 - 15017670
Alignment:
Q  161 aaaaacagtaagacaaacacatgatcagaggcatattcatcacaagatggcatat 215  Q
    ||||||||||| |||| || ||||||||  |||||||||||||||||| ||||||    
T  15017724 aaaaacagtaacacaagcatatgatcagtagcatattcatcacaagattgcatat 15017670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 208
Target Start/End: Original strand, 18686286 - 18686369
Alignment:
Q  126 ttgcttgcaaaacaagaaatttgc-aaatcacatccaaaaac-agtaagacaaacacatgatcagaggcatattcatcacaagat 208  Q
    |||||||||| ||||||||||| | |||||| | |||||||| || |||| || ||||||| ||||||||||||||||| |||||    
T  18686286 ttgcttgcaagacaagaaatttaccaaatcatacccaaaaaccagcaaga-aagcacatgaccagaggcatattcatcataagat 18686369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 3e-23; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 122 - 217
Target Start/End: Complemental strand, 34194213 - 34194119
Alignment:
Q  122 cacattgcttgcaaaacaagaaatttgcaaatcacatccaaaaacagtaagacaaacacatgatcagaggcatattcatcacaagatggcatatca 217  Q
    |||||| ||||||| |||||||| |  ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||    
T  34194213 cacattacttgcaacacaagaaactaacaaatcacatc-aaaaacagtaaaacaaacacatgatcagaggcatattcatcacaaaatagcatatca 34194119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 122 - 217
Target Start/End: Original strand, 34196507 - 34196601
Alignment:
Q  122 cacattgcttgcaaaacaagaaatttgcaaatcacatccaaaaacagtaagacaaacacatgatcagaggcatattcatcacaagatggcatatca 217  Q
    |||||| ||||||| |||||||| |  ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||    
T  34196507 cacattacttgcaacacaagaaactaacaaatcacatc-aaaaacagtaaaacaaacacatgatcagaggcatattcatcacaaaatagcatatca 34196601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 18137399 - 18137179
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagattagcaaggacacattcaagcaaagtactataccaaacttataaagatattttg 100  Q
    |||| ||||| ||||||||| |||| |||||||||||||||||| ||||  |  ||||||| |||||||||||  | |||||| | ||| ||| ||||      
T  18137399 tcatggcaattttgaaagagattttgtttcaagccatgacatgaaattaatagagacacatgcaagcaaagtatcacaccaaattcatagagaaatttga 18137300  T
Q  101 cactttatttcttnnnnnnnncacat--tgcttgcaaaacaagaaatttgcaaa-tcacatccaaaaacagtaagacaaacacatgatcagaggcatatt 197  Q
    ||||||||| |||        ||| |  ||||||||||||||||||||| |||| ||| |||||||||||| || |   |||||||||||||||||||||    
T  18137299 cactttattccttaagacaaacacttgttgcttgcaaaacaagaaatttacaaaatcatatccaaaaacagcaaaaaggacacatgatcagaggcatatt 18137200  T
Q  198 catcacaagatggcatatcat 218  Q
    |||||||| || | |||||||    
T  18137199 catcacaatattgtatatcat 18137179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 23831396 - 23831616
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagattagcaaggacacattcaagcaaagtactataccaaacttataaagatattttg 100  Q
    |||| ||||| ||||||||| |||| |||||||| ||||||||| ||||  |  ||||||| |||||||||||  | |||||| | ||| ||  ||||      
T  23831396 tcatggcaattttgaaagagattttgtttcaagctatgacatgaaattaatagagacacatgcaagcaaagtatcacaccaaattcatagaggaatttga 23831495  T
Q  101 cactttatttcttnnnnnnnncacat--tgcttgcaaaacaagaaatttgcaaa-tcacatccaaaaacagtaagacaaacacatgatcagaggcatatt 197  Q
    |||||||||||||        ||| |  ||||||||||||||||||||| |||| ||| |||||||||||| || | || ||||||| ||||||||||||    
T  23831496 cactttatttcttaagacaaacacttgttgcttgcaaaacaagaaatttacaaaatcatatccaaaaacagcaaaaaaagcacatgaccagaggcatatt 23831595  T
Q  198 catcacaagatggcatatcat 218  Q
    ||||||||||| | |||||||    
T  23831596 catcacaagattggatatcat 23831616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 122 - 217
Target Start/End: Original strand, 10839760 - 10839855
Alignment:
Q  122 cacattgcttgcaaaacaagaaatttgcaaatcacatccaaaaacagta-agacaaacacatgatcagaggcatattcatcacaagatggcatatca 217  Q
    |||||| ||||||| |||||||||| ||||||||||| ||||||||||| | |||||||||||||||||| |||||||| ||| | || ||||||||    
T  10839760 cacattacttgcaacacaagaaattagcaaatcacat-caaaaacagtacaaacaaacacatgatcagagacatattcaccacgaaattgcatatca 10839855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 26497845 - 26497953
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagattagcaaggacacattcaagcaaagtactataccaaacttataaagatattttg 100  Q
    |||| ||||| ||||||||| |||| | |||||||||||||||| ||||  | |||||||| |||||||||||| |||||||| | ||| ||| ||||      
T  26497845 tcatggcaattttgaaagagattttgtgtcaagccatgacatgaaattaatagggacacatgcaagcaaagtaccataccaaattcatagagaaatttga 26497944  T
Q  101 cactttatt 109  Q
    |||||||||    
T  26497945 cactttatt 26497953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 26600185 - 26600077
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagattagcaaggacacattcaagcaaagtactataccaaacttataaagatattttg 100  Q
    |||| ||||| ||||||||| |||| | |||||||||||||||| ||||  | |||||||| |||||||||||| |||||||| | ||| ||| ||||      
T  26600185 tcatggcaattttgaaagagattttgtgtcaagccatgacatgaaattaatagggacacatgcaagcaaagtaccataccaaattcatagagaaatttga 26600086  T
Q  101 cactttatt 109  Q
    |||||||||    
T  26600085 cactttatt 26600077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 24891915 - 24892024
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagattagcaaggacacattcaagcaaagtactataccaaacttataaagatattttg 100  Q
    |||| ||||| ||||||||| |||| | |||||||||||||||| ||||  | |||||||| |||||||||||| | |||||| | ||| ||| ||||      
T  24891915 tcatggcaattttgaaagagattttgtgtcaagccatgacatgaaattaatagggacacatgcaagcaaagtaccacaccaaattcatagagaaatttga 24892014  T
Q  101 cactttattt 110  Q
    ||||||||||    
T  24892015 cactttattt 24892024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 21997840 - 21997728
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagattagcaaggacacattcaagcaaagtactataccaaacttataaagatattttg 100  Q
    |||||||||| ||||||||| |||| |||||||||||||||||| ||||     ||||||| |||||||||||  | |||||| | ||| ||| ||||      
T  21997840 tcatagcaattttgaaagagattttgtttcaagccatgacatgaaattaatggagacacatgcaagcaaagtatcacaccaaattcatagagaaatttga 21997741  T
Q  101 cactttatttctt 113  Q
    |||||||||||||    
T  21997740 cactttatttctt 21997728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 126 - 208
Target Start/End: Complemental strand, 22149653 - 22149570
Alignment:
Q  126 ttgcttgcaaaacaagaaatttgcaaa-tcacatccaaaaac-agtaagacaaacacatgatcagaggcatattcatcacaagat 208  Q
    |||||||||||||||||||||| |||| ||| |||||||||| || |||| || ||||||| ||||||||||||||||| |||||    
T  22149653 ttgcttgcaaaacaagaaatttacaaaatcatatccaaaaaccagcaaga-aagcacatgaccagaggcatattcatcataagat 22149570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 11026788 - 11026860
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagattagcaaggacacattcaagcaaagta 73  Q
    |||| ||||| ||||||||  |||| |||||||||||||||||| ||||  |  ||||||| |||||||||||    
T  11026788 tcatggcaattttgaaagaaattttgtttcaagccatgacatgaaattaatagagacacatgcaagcaaagta 11026860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 16499067 - 16499127
Alignment:
Q  53 aggacacattcaagcaaagtactataccaaacttataaagatattttgcactttatttctt 113  Q
    ||||||||||||||| ||| | |||  || | || ||||||||||||||||||||||||||    
T  16499067 aggacacattcaagccaagaattatgacacatttttaaagatattttgcactttatttctt 16499127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 16508362 - 16508422
Alignment:
Q  53 aggacacattcaagcaaagtactataccaaacttataaagatattttgcactttatttctt 113  Q
    ||||||||||||||| ||| | |||  || | || ||||||||||||||||||||||||||    
T  16508362 aggacacattcaagccaagaattatgacacatttttaaagatattttgcactttatttctt 16508422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 16523478 - 16523538
Alignment:
Q  53 aggacacattcaagcaaagtactataccaaacttataaagatattttgcactttatttctt 113  Q
    ||||||||||||||| ||| | |||  || | || ||||||||||||||||||||||||||    
T  16523478 aggacacattcaagccaagaattatgacacatttttaaagatattttgcactttatttctt 16523538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 5316919 - 5316712
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagattagcaaggacacattcaagcaaagtactataccaaacttataaagatattttg 100  Q
    |||| ||||| ||||||||| |||| |||||||||||||||||| ||||  |  ||||||| |||||||||||  | |||||| | ||| ||| ||||      
T  5316919 tcatggcaattttgaaagagattttgtttcaagccatgacatgaaattaatagagacacatgcaagcaaagtatcacaccaaattcatagagaaatttga 5316820  T
Q  101 cactttatttcttnnnnnnnncac--attgcttgcaaaacaagaaatttgcaaa-tcacatccaaaaacagtaagacaaacacatgatcagaggcatatt 197  Q
    ||||||||| |||        |||  |||| |||||||||||||||||| |||| ||| |||||||||||| || |   |||||||||||||||||||||    
T  5316819 cactttattccttaagacaaacacttattgtttgcaaaacaagaaatttacaaaatcatatccaaaaacagcaaaaaggacacatgatcagaggcatatt 5316720  T
Q  198 catcacaa 205  Q
    ||||||||    
T  5316719 catcacaa 5316712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 35057326 - 35057533
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagattagcaaggacacattcaagcaaagtactataccaaacttataaagatattttg 100  Q
    |||| ||||| ||||||||| |||| |||||||||||||||||| ||||  |  ||||||| |||||||||||  | |||||| | ||| ||| ||||      
T  35057326 tcatggcaattttgaaagagattttgtttcaagccatgacatgaaattaatagagacacatgcaagcaaagtatcacaccaaattcatagagaaatttga 35057425  T
Q  101 cactttatttcttnnnnnnnncac--attgcttgcaaaacaagaaatttgcaaa-tcacatccaaaaacagtaagacaaacacatgatcagaggcatatt 197  Q
    ||||||||| |||        |||  |||| |||||||||||||||||| |||| ||| |||||||||||| || |   |||||||||||||||||||||    
T  35057426 cactttattccttaagacaaacacttattgtttgcaaaacaagaaatttacaaaatcatatccaaaaacagcaaaaaggacacatgatcagaggcatatt 35057525  T
Q  198 catcacaa 205  Q
    ||||||||    
T  35057526 catcacaa 35057533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 137 - 215
Target Start/End: Complemental strand, 12785264 - 12785187
Alignment:
Q  137 acaagaaatttgcaaatcacatccaaaaacagtaagacaaacacatgatcagaggcatattcatcacaagatggcatat 215  Q
    ||||||||||  ||||||| ||| |||| |||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  12785264 acaagaaattaacaaatcatatctaaaa-cagtaaaacaaacacatgatcagaggcatattcatcacaagattgcatat 12785187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 208
Target Start/End: Complemental strand, 15386938 - 15386853
Alignment:
Q  122 cacattgcttgcaaaacaagaaatttgcaaatcacatccaaaaacagtaagacaaacacatgatcagaggcatattcatcacaagat 208  Q
    |||||| |||| || ||||||||||  ||||||||||| |||| |||||| | ||||||||||||||||||||||||||||||||||    
T  15386938 cacattccttgaaacacaagaaattaacaaatcacatctaaaa-cagtaaaataaacacatgatcagaggcatattcatcacaagat 15386853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 14749289 - 14749361
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagattagcaaggacacattcaagcaaagta 73  Q
    |||||||||| |||| |||| |||| |||||||||||||||||| ||||  |  ||||||| |||||||||||    
T  14749289 tcatagcaattttgagagagattttgtttcaagccatgacatgaaattaatagagacacatgcaagcaaagta 14749361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 14768392 - 14768464
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagattagcaaggacacattcaagcaaagta 73  Q
    |||||||||| |||| |||| |||| |||||||||||||||||| ||||  |  ||||||| |||||||||||    
T  14768392 tcatagcaattttgagagagattttgtttcaagccatgacatgaaattaatagagacacatgcaagcaaagta 14768464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 187
Target Start/End: Original strand, 14240390 - 14240455
Alignment:
Q  122 cacattgcttgcaaaacaagaaatttgcaaatcacatccaaaaacagta-agacaaacacatgatca 187  Q
    |||||| ||||||| ||||||||||  |||||||||| ||||||||||| | |||||||||||||||    
T  14240390 cacattacttgcaacacaagaaattaacaaatcacat-caaaaacagtacaaacaaacacatgatca 14240455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 215
Target Start/End: Original strand, 18465602 - 18465656
Alignment:
Q  161 aaaaacagtaagacaaacacatgatcagaggcatattcatcacaagatggcatat 215  Q
    ||||||||||| |||| || ||||||||  |||||||||||||||||| ||||||    
T  18465602 aaaaacagtaacacaagcatatgatcagtagcatattcatcacaagattgcatat 18465656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 15082112 - 15082193
Alignment:
Q  122 cacattgcttgcaaaacaagaaatttgcaaatcacatc-caaaaacagtaagacaaacacatgatcagaggcatattcatca 202  Q
    |||||| |||||||||||||||| |   || ||||||| || ||||||||| ||| ||| |||||||||| |||||||||||    
T  15082112 cacattacttgcaaaacaagaaaatgaaaattcacatcacacaaacagtaaaacacacatatgatcagagacatattcatca 15082193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 18043593 - 18043533
Alignment:
Q  53 aggacacattcaagcaaagtactataccaaacttataaagatattttgcactttatttctt 113  Q
    ||||||||||||||| ||| | |||  || | || ||||||||||||||||||||||||||    
T  18043593 aggacacattcaagccaagaattatgacacatttttaaagatattttgcactttatttctt 18043533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 43151639 - 43151591
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagatta 49  Q
    |||| ||||| ||||||||| |||| |||||||||||||||||| ||||    
T  43151639 tcatggcaattttgaaagagattttgtttcaagccatgacatgaaatta 43151591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 18325977 - 18325770
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagattagcaaggacacattcaagcaaagtactataccaaacttataaagatattttg 100  Q
    |||| ||||| ||||||||| |||| |||||||||||||||||| ||||  |  ||||||| |||||||||||  | ||| || | ||| ||| |||| |    
T  18325977 tcatggcaattttgaaagagattttgtttcaagccatgacatgaaattaatagagacacatgcaagcaaagtatcacaccgaattcatagagaaatttgg 18325878  T
Q  101 cactttatttcttnnnnnnnncac--attgcttgcaaaacaagaaatttgcaaa-tcacatccaaaaacagtaagacaaacacatgatcagaggcatatt 197  Q
    ||||||||| |||        |||  |||| |||||||||||||||||| |||| ||| |||||||||||| || |   |||||||||||||||||||||    
T  18325877 cactttattccttaagacaaacacttattgtttgcaaaacaagaaatttacaaaatcatatccaaaaacagcaaaaaggacacatgatcagaggcatatt 18325778  T
Q  198 catcacaa 205  Q
    ||||||||    
T  18325777 catcacaa 18325770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 18341076 - 18340869
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagattagcaaggacacattcaagcaaagtactataccaaacttataaagatattttg 100  Q
    |||| ||||| ||||||||| |||| |||||||||||||||||| ||||  |  ||||||| |||||||||||  | ||| || | ||| ||| |||| |    
T  18341076 tcatggcaattttgaaagagattttgtttcaagccatgacatgaaattaatagagacacatgcaagcaaagtatcacaccgaattcatagagaaatttgg 18340977  T
Q  101 cactttatttcttnnnnnnnncac--attgcttgcaaaacaagaaatttgcaaa-tcacatccaaaaacagtaagacaaacacatgatcagaggcatatt 197  Q
    ||||||||| |||        |||  |||| |||||||||||||||||| |||| ||| |||||||||||| || |   |||||||||||||||||||||    
T  18340976 cactttattccttaagacaaacacttattgtttgcaaaacaagaaatttacaaaatcatatccaaaaacagcaaaaaggacacatgatcagaggcatatt 18340877  T
Q  198 catcacaa 205  Q
    ||||||||    
T  18340876 catcacaa 18340869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 32964548 - 32964755
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagattagcaaggacacattcaagcaaagtactataccaaacttataaagatattttg 100  Q
    |||| ||||| ||||||||| |||| |||||||||||||||||| ||||  |  ||||||| |||||||||||  | |||||| | ||| ||| ||||      
T  32964548 tcatggcaattttgaaagagattttgtttcaagccatgacatgaaattaatagagacacatgcaagcaaagtatcacaccaaattcatagagaaatttga 32964647  T
Q  101 cactttatttcttnnnnnnnncac--attgcttgcaaaacaagaaatttgcaaa-tcacatccaaaaacagtaagacaaacacatgatcagaggcatatt 197  Q
    ||||||||| |||        |||  |||| |||||||||||||||||| |||| ||| |||||||||||| || |   |||||||||||||||||||||    
T  32964648 cactttattccttaagacaaacacttattgtttgcaaaacaagaaatttacaaaatcatatccaaaaacagcaaaaaggacacatgatcagaggcatatt 32964747  T
Q  198 catcacaa 205  Q
    ||||||||    
T  32964748 catcacaa 32964755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 17904588 - 17904368
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagattagcaaggacacattcaagcaaagtactataccaaacttataaagatattttg 100  Q
    |||| ||||| ||||||||| |||| |||||||| ||||||||| ||||  |  ||||||| |||||||||||  | |||||| | ||| ||  ||||      
T  17904588 tcatggcaattttgaaagagattttgtttcaagctatgacatgaaattaatagagacacatgcaagcaaagtatcacaccaaattcatagaggaatttga 17904489  T
Q  101 cactttatttcttnnnnnnnncacat--tgcttgcaaaacaagaaatttgcaaa-tcacatccaaaaacagtaagacaaacacatgatcagaggcatatt 197  Q
    |||||||||||||        ||| |  ||||||||||||||||||||| |||| ||| |||||||||||| || | || ||||||| |||||||| |||    
T  17904488 cactttatttcttaagacaaacacttgttgcttgcaaaacaagaaatttacaaaatcatatccaaaaacagcaaaaaaagcacatgaccagaggcacatt 17904389  T
Q  198 catcacaagatggcatatcat 218  Q
    ||||||||||| | |||||||    
T  17904388 catcacaagattggatatcat 17904368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 4716936 - 4716729
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagattagcaaggacacattcaagcaaagtactataccaaacttataaagatattttg 100  Q
    |||| ||||| ||||||||| |||| |||||||||||||||||| ||||  |  |||| || |||||||||||  | |||||| | ||| ||| ||||      
T  4716936 tcatggcaattttgaaagagattttgtttcaagccatgacatgaaattaatagagacatatgcaagcaaagtatcacaccaaattcatagagaaatttga 4716837  T
Q  101 cactttatttcttnnnnnnnncac--attgcttgcaaaacaagaaatttgcaaa-tcacatccaaaaacagtaagacaaacacatgatcagaggcatatt 197  Q
    ||||||||| |||        |||  |||| |||||||||||||||||| |||| ||| |||||||||||| || |   |||||||||||||||||||||    
T  4716836 cactttattccttaagacaaacacttattgtttgcaaaacaagaaatttacaaaatcatatccaaaaacagcaaaaaggacacatgatcagaggcatatt 4716737  T
Q  198 catcacaa 205  Q
    ||||||||    
T  4716736 catcacaa 4716729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 4732116 - 4731909
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagattagcaaggacacattcaagcaaagtactataccaaacttataaagatattttg 100  Q
    |||| ||||| ||||||||| |||| |||||||||||||||||| ||||  |  |||| || |||||||||||  | |||||| | ||| ||| ||||      
T  4732116 tcatggcaattttgaaagagattttgtttcaagccatgacatgaaattaatagagacatatgcaagcaaagtatcacaccaaattcatagagaaatttga 4732017  T
Q  101 cactttatttcttnnnnnnnncac--attgcttgcaaaacaagaaatttgcaaa-tcacatccaaaaacagtaagacaaacacatgatcagaggcatatt 197  Q
    ||||||||| |||        |||  |||| |||||||||||||||||| |||| ||| |||||||||||| || |   |||||||||||||||||||||    
T  4732016 cactttattccttaagacaaacacttattgtttgcaaaacaagaaatttacaaaatcatatccaaaaacagcaaaaaggacacatgatcagaggcatatt 4731917  T
Q  198 catcacaa 205  Q
    ||||||||    
T  4731916 catcacaa 4731909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 6212385 - 6212178
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagattagcaaggacacattcaagcaaagtactataccaaacttataaagatattttg 100  Q
    |||| ||||| ||||||||| |||| |||||||||||||||||| ||||  |  |||| || |||||||||||  | |||||| | ||| ||| ||||      
T  6212385 tcatggcaattttgaaagagattttgtttcaagccatgacatgaaattaatagagacatatgcaagcaaagtatcacaccaaattcatagagaaatttga 6212286  T
Q  101 cactttatttcttnnnnnnnncac--attgcttgcaaaacaagaaatttgcaaa-tcacatccaaaaacagtaagacaaacacatgatcagaggcatatt 197  Q
    ||||||||| |||        |||  |||| |||||||||||||||||| |||| ||| |||||||||||| || |   |||||||||||||||||||||    
T  6212285 cactttattccttaagacaaacacttattgtttgcaaaacaagaaatttacaaaatcatatccaaaaacagcaaaaaggacacatgatcagaggcatatt 6212186  T
Q  198 catcacaa 205  Q
    ||||||||    
T  6212185 catcacaa 6212178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 217
Target Start/End: Original strand, 10930253 - 10930347
Alignment:
Q  122 cacattgcttgcaaaacaagaaatttgcaaatcacatccaaaaacagtaagacaaacacatgatcagaggcatattcatcacaagatggcatatca 217  Q
    ||||||||||| || |||||||| |   |||||||||| |||| |||||| ||||||||||||||||||||||||||||||||| || ||||||||    
T  10930253 cacattgcttgaaacacaagaaactaaaaaatcacatctaaaa-cagtaaaacaaacacatgatcagaggcatattcatcacaaaattgcatatca 10930347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 9095917 - 9095972
Alignment:
Q  162 aaaacagtaagacaaacacatgatcagaggcatattcatcacaagatggcatatca 217  Q
    |||||||||| ||||||||||||||||||||||||||||||||| || ||||||||    
T  9095917 aaaacagtaaaacaaacacatgatcagaggcatattcatcacaaaattgcatatca 9095972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 26685681 - 26685471
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagattagcaaggacacattcaagcaaagtactataccaaacttataaagatattttg 100  Q
    |||| ||||| ||||||||| |||| ||||||||||||| |||| ||||  |  ||||||| |||||||||||  | |||||| | ||| ||  ||||      
T  26685681 tcatggcaattttgaaagagattttgtttcaagccatgatatgaaattaatagagacacatgcaagcaaagtatcacaccaaattcatagaggaatttga 26685582  T
Q  101 cactttatttcttnnnnnnnncac--attgcttgcaaaacaagaaatttgc-aaatcacatccaaaaacagtaagacaaacacatgatcagaggcatatt 197  Q
    ||||||||| |||        |||   |||||||||||||||||||||| | |||||| |||||||||||| || | |  ||||||| ||||||||||||    
T  26685581 cactttattccttaagacaaacacttgttgcttgcaaaacaagaaatttacaaaatcatatccaaaaacagcaaaaaaggcacatgaccagaggcatatt 26685482  T
Q  198 catcacaagat 208  Q
    |||||||||||    
T  26685481 catcacaagat 26685471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 6187618 - 6187411
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagattagcaaggacacattcaagcaaagtactataccaaacttataaagatattttg 100  Q
    |||| ||||| |||||| || |||| |||||||||||||||||| ||||  |  |||| || |||||||||||  | |||||| | ||| ||| ||||      
T  6187618 tcatggcaattttgaaaaagattttgtttcaagccatgacatgaaattaatagagacatatgcaagcaaagtatcacaccaaattcatagagaaatttga 6187519  T
Q  101 cactttatttcttnnnnnnnncac--attgcttgcaaaacaagaaatttgcaaa-tcacatccaaaaacagtaagacaaacacatgatcagaggcatatt 197  Q
    ||||||||| |||        |||  |||| |||||||||||||||||| |||| ||| |||||||||||| || |   |||||||||||||||||||||    
T  6187518 cactttattccttaagacaaacacttattgtttgcaaaacaagaaatttacaaaatcatatccaaaaacagcaaaaaggacacatgatcagaggcatatt 6187419  T
Q  198 catcacaa 205  Q
    ||| ||||    
T  6187418 cattacaa 6187411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 15476347 - 15476402
Alignment:
Q  162 aaaacagtaagacaaacacatgatcagaggcatattcatcacaagatggcatatca 217  Q
    |||||||||| | ||||||||||||||||||||||||||||||| || ||||||||    
T  15476347 aaaacagtaaaaaaaacacatgatcagaggcatattcatcacaaaattgcatatca 15476402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 126 - 208
Target Start/End: Complemental strand, 10638104 - 10638021
Alignment:
Q  126 ttgcttgcaaaacaagaaatttgcaaa-tcacatccaaaaac-agtaagacaaacacatgatcagaggcatattcatcacaagat 208  Q
    |||||||||||||||||||||| |||| ||| |||||||||| || |||| || ||||||| ||||||| |||||||||||||||    
T  10638104 ttgcttgcaaaacaagaaatttacaaaatcatatccaaaaaccagcaaga-aagcacatgaccagaggcgtattcatcacaagat 10638021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 126 - 208
Target Start/End: Complemental strand, 10653082 - 10652999
Alignment:
Q  126 ttgcttgcaaaacaagaaatttgcaaa-tcacatccaaaaac-agtaagacaaacacatgatcagaggcatattcatcacaagat 208  Q
    |||||||||||||||||||||| |||| ||| |||||||||| || |||| || ||||||| ||||||| |||||||||||||||    
T  10653082 ttgcttgcaaaacaagaaatttacaaaatcatatccaaaaaccagcaaga-aagcacatgaccagaggcgtattcatcacaagat 10652999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 217
Target Start/End: Original strand, 28166453 - 28166548
Alignment:
Q  122 cacattgcttgcaaaacaagaaatttgcaaatcacatccaaaaacagta-agacaaacacatgatcagaggcatattcatcacaagatggcatatca 217  Q
    |||||| ||||||| ||||||||||  ||||||||||  ||||| |||| | |||||||||||||||||| |||||||| ||||| || ||||||||    
T  28166453 cacattacttgcaacacaagaaattaacaaatcacatt-aaaaatagtacaaacaaacacatgatcagagacatattcaccacaaaattgcatatca 28166548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 202
Target Start/End: Complemental strand, 19088904 - 19088750
Alignment:
Q  51 caaggacacattcaagcaaagtactataccaaacttataaagatattttgcactttatttcttnnnnnnnncaca--ttgcttgcaaaacaagaaatttg 148  Q
    ||||||||||||||||| ||| | |||  || | || || |||||||||||||||||||||||        ||||  || |||||||||||| |||  ||    
T  19088904 caaggacacattcaagccaagaattatgacatatttgtagagatattttgcactttatttcttgacaaaaacacacattacttgcaaaacaaaaaaaatg 19088805  T
Q  149 caaat-cacatccaaaaacagtaagacaaacacatgatcagaggcatattcatca 202  Q
     |||| |||||||| ||||||||| ||| ||| |||||||||| |||||||||||    
T  19088804 aaaattcacatccacaaacagtaaaacacacatatgatcagagacatattcatca 19088750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 3066682 - 3066634
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagatta 49  Q
    |||||||||| ||||||||| |||| |||||||||||||||||| ||||    
T  3066682 tcatagcaattttgaaagagattttgtttcaagccatgacatgaaatta 3066634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 18282183 - 18282255
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagattagcaaggacacattcaagcaaagta 73  Q
    |||||||||| |||| |||| |||| |||||||||||||||||| ||||  |  ||||||| |||||||||||    
T  18282183 tcatagcaattttgagagagattttgtttcaagccatgacatgaaattaatagagacacatgcaagcaaagta 18282255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 18297484 - 18297556
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagattagcaaggacacattcaagcaaagta 73  Q
    |||||||||| |||| |||| |||| |||||||||||||||||| ||||  |  ||||||| |||||||||||    
T  18297484 tcatagcaattttgagagagattttgtttcaagccatgacatgaaattaatagagacacatgcaagcaaagta 18297556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 18312785 - 18312857
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagattagcaaggacacattcaagcaaagta 73  Q
    |||||||||| |||| |||| |||| |||||||||||||||||| ||||  |  ||||||| |||||||||||    
T  18312785 tcatagcaattttgagagagattttgtttcaagccatgacatgaaattaatagagacacatgcaagcaaagta 18312857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 22492397 - 22492349
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagatta 49  Q
    ||||||||| |||||||||| |||| |||||||||||||||||| ||||    
T  22492397 tcatagcaaccttgaaagagattttgtttcaagccatgacatgaaatta 22492349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 43717910 - 43717862
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagatta 49  Q
    |||||||||| ||||||||| |||| |||||||||||||||||| ||||    
T  43717910 tcatagcaattttgaaagagattttgtttcaagccatgacatgaaatta 43717862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 215
Target Start/End: Original strand, 16615314 - 16615368
Alignment:
Q  161 aaaaacagtaagacaaacacatgatcagaggcatattcatcacaagatggcatat 215  Q
    ||||||||||| |||| || ||||||||  |||||||||||||||||| ||||||    
T  16615314 aaaaacagtaacacaagcatatgatcagtagcatattcatcacaagattgcatat 16615368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 215
Target Start/End: Complemental strand, 18922228 - 18922174
Alignment:
Q  161 aaaaacagtaagacaaacacatgatcagaggcatattcatcacaagatggcatat 215  Q
    ||||||||||| |||| || ||||||||  |||||||||||||||||| ||||||    
T  18922228 aaaaacagtaacacaagcatatgatcagtagcatattcatcacaagattgcatat 18922174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 215
Target Start/End: Complemental strand, 22051546 - 22051492
Alignment:
Q  161 aaaaacagtaagacaaacacatgatcagaggcatattcatcacaagatggcatat 215  Q
    ||||||||||| |||| || ||||||||  |||||||||||||||||| ||||||    
T  22051546 aaaaacagtaacacaagcatatgatcagtagcatattcatcacaagattgcatat 22051492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 215
Target Start/End: Complemental strand, 29942269 - 29942215
Alignment:
Q  161 aaaaacagtaagacaaacacatgatcagaggcatattcatcacaagatggcatat 215  Q
    ||||||||||| |||| || ||||||||  |||||||||||||||||| ||||||    
T  29942269 aaaaacagtaacacaagcatatgatcagtagcatattcatcacaagattgcatat 29942215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 215
Target Start/End: Complemental strand, 29991423 - 29991369
Alignment:
Q  161 aaaaacagtaagacaaacacatgatcagaggcatattcatcacaagatggcatat 215  Q
    ||||||||||| |||| || ||||||||  |||||||||||||||||| ||||||    
T  29991423 aaaaacagtaacacaagcatatgatcagtagcatattcatcacaagattgcatat 29991369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 15364675 - 15364724
Alignment:
Q  153 tcacatccaaaaacagtaagacaaacacatgatcagaggcatattcatca 202  Q
    ||||||||| ||||||||| ||| ||| |||||||||| |||||||||||    
T  15364675 tcacatccacaaacagtaaaacacacatatgatcagagacatattcatca 15364724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 5586045 - 5586093
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagatta 49  Q
    |||||||||| |||||||| ||||| |||||||||||| ||||| ||||    
T  5586045 tcatagcaattttgaaagaagttttgtttcaagccatggcatgaaatta 5586093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 5620265 - 5620313
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagatta 49  Q
    |||||||||| |||||||| ||||| |||||||||||| ||||| ||||    
T  5620265 tcatagcaattttgaaagaagttttgtttcaagccatggcatgaaatta 5620313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 6227558 - 6227510
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagatta 49  Q
    |||||||||  ||||||||| |||| |||||||||||||||||| ||||    
T  6227558 tcatagcaactttgaaagagattttgtttcaagccatgacatgaaatta 6227510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 208
Target Start/End: Complemental strand, 7991596 - 7991513
Alignment:
Q  126 ttgcttgcaaaacaagaaatttgcaaa-tcacatccaaaaac-agtaagacaaacacatgatcagaggcatattcatcacaagat 208  Q
    |||||||||||| ||||||||| |||| ||| |||||||||| || |||| || ||||||| ||| ||| |||||||||||||||    
T  7991596 ttgcttgcaaaataagaaatttacaaaatcatatccaaaaaccagcaaga-aagcacatgaccaggggcgtattcatcacaagat 7991513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 15882738 - 15882798
Alignment:
Q  53 aggacacattcaagcaaagtactataccaaacttataaagatattttgcactttatttctt 113  Q
    ||||||||||||||| ||| | |||  || | || ||||||||||||||||||||||||||    
T  15882738 aggacacattcaagccaagaattatgacacatttttaaagatattttgcactttatttctt 15882798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 15897916 - 15897976
Alignment:
Q  53 aggacacattcaagcaaagtactataccaaacttataaagatattttgcactttatttctt 113  Q
    ||||||||||||||| ||| | |||  || | || ||||||||||||||||||||||||||    
T  15897916 aggacacattcaagccaagaattatgacacatttttaaagatattttgcactttatttctt 15897976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 26428320 - 26428272
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagatta 49  Q
    |||||||||  ||||||||| |||| |||||||||||||||||| ||||    
T  26428320 tcatagcaacattgaaagagattttgtttcaagccatgacatgaaatta 26428272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 2e-21; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 4727688 - 4727895
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagattagcaaggacacattcaagcaaagtactataccaaacttataaagatattttg 100  Q
    |||| ||||| ||||||||| |||| |||||||||||||||||| ||||  |  ||||||| |||||||||||  | |||||| | ||| ||| ||||      
T  4727688 tcatggcaattttgaaagagattttgtttcaagccatgacatgaaattaatagagacacatgcaagcaaagtatcacaccaaattcatagagaaatttga 4727787  T
Q  101 cactttatttcttnnnnnnnncac--attgcttgcaaaacaagaaatttgcaaa-tcacatccaaaaacagtaagacaaacacatgatcagaggcatatt 197  Q
    ||||||||| |||        |||  |||| |||||||||||||||||| |||| ||| |||||||||||| || |   |||||||||||||||||||||    
T  4727788 cactttattccttaagacaaacacttattgtttgcaaaacaagaaatttacaaaatcatatccaaaaacagcaaaaaggacacatgatcagaggcatatt 4727887  T
Q  198 catcacaa 205  Q
    ||||||||    
T  4727888 catcacaa 4727895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 15713899 - 15714106
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagattagcaaggacacattcaagcaaagtactataccaaacttataaagatattttg 100  Q
    |||| ||||| ||||||||| |||| |||||||||||||||||| ||||  |  ||||||| |||||||||||  | |||||| | ||| ||| ||||      
T  15713899 tcatggcaattttgaaagagattttgtttcaagccatgacatgaaattaatagagacacatgcaagcaaagtatcacaccaaattcatagagaaatttga 15713998  T
Q  101 cactttatttcttnnnnnnnncac--attgcttgcaaaacaagaaatttgcaaa-tcacatccaaaaacagtaagacaaacacatgatcagaggcatatt 197  Q
    ||||||||| |||        |||  |||| |||||||||||||||||| |||| ||| |||||||||||| || |   |||||||||||||||||||||    
T  15713999 cactttattccttaagacaaacacttattgtttgcaaaacaagaaatttacaaaatcatatccaaaaacagcaaaaaggacacatgatcagaggcatatt 15714098  T
Q  198 catcacaa 205  Q
    ||||||||    
T  15714099 catcacaa 15714106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 217
Target Start/End: Original strand, 29438928 - 29439022
Alignment:
Q  122 cacattgcttgcaaaacaagaaatttgcaaatcacatccaaaaacagtaagacaaacacatgatcagaggcatattcatcacaagatggcatatca 217  Q
    |||||| ||||||| |||||||| |  ||||||||||| ||||||||||| ||||||||||| |||||||||||| |||||||| || ||||||||    
T  29438928 cacattacttgcaacacaagaaactaacaaatcacatc-aaaaacagtaaaacaaacacatggtcagaggcatatccatcacaaaattgcatatca 29439022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 122 - 217
Target Start/End: Complemental strand, 17259872 - 17259777
Alignment:
Q  122 cacattgcttgcaaaacaagaaatttgcaaatcacatccaaaaacagta-agacaaacacatgatcagaggcatattcatcacaagatggcatatca 217  Q
    |||||| ||||||| |||||||| |  ||||||||||| |||||||||| | |||||||||||||||||||||||| |||||||| || ||||||||    
T  17259872 cacattacttgcaacacaagaaactaacaaatcacatc-aaaaacagtacaaacaaacacatgatcagaggcatatccatcacaaaattgcatatca 17259777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 122 - 217
Target Start/End: Complemental strand, 18085436 - 18085341
Alignment:
Q  122 cacattgcttgcaaaacaagaaatttgcaaatcacatccaaaaacagta-agacaaacacatgatcagaggcatattcatcacaagatggcatatca 217  Q
    |||||| ||||||| ||||||||||  ||||||| ||| |||||||||| | |||||||||||||||||||||||| |||||||| || ||||||||    
T  18085436 cacattacttgcaacacaagaaattaacaaatcatatc-aaaaacagtacaaacaaacacatgatcagaggcatatccatcacaaaattgcatatca 18085341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 217
Target Start/End: Complemental strand, 22699703 - 22699648
Alignment:
Q  162 aaaacagtaagacaaacacatgatcagaggcatattcatcacaagatggcatatca 217  Q
    |||||||||| ||||||||||||||||||||||||||||||||| || ||||||||    
T  22699703 aaaacagtaaaacaaacacatgatcagaggcatattcatcacaaaattgcatatca 22699648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 26150059 - 26149950
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagattagcaaggacacattcaagcaaagtactataccaaacttataaagatattttg 100  Q
    |||| ||||| ||||||||| |||| | |||||||||||||||| ||||  | |||||||| |||||||||||| | |||||| | ||| ||| ||||      
T  26150059 tcatggcaattttgaaagagattttgtgtcaagccatgacatgaaattaatagggacacatgcaagcaaagtaccacaccaaattcatagagaaatttga 26149960  T
Q  101 cactttattt 110  Q
    ||||||||||    
T  26149959 cactttattt 26149950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 205
Target Start/End: Original strand, 13818990 - 13819071
Alignment:
Q  126 ttgcttgcaaaacaagaaatttgcaaa-tcacatccaaaaa-cagtaagacaaacacatgatcagaggcatattcatcacaa 205  Q
    |||||||||||||||||||||| |||| ||| ||||||||| ||| || |   |||||||| ||||||||||||||||||||    
T  13818990 ttgcttgcaaaacaagaaatttacaaaatcatatccaaaaaacagcaaaaaggacacatgaccagaggcatattcatcacaa 13819071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 15706082 - 15706154
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagattagcaaggacacattcaagcaaagta 73  Q
    |||| ||||| ||| |||||||||| |||||||||||||||||| ||||  |  ||||||| |||||||||||    
T  15706082 tcatggcaattttgtaagaggttttgtttcaagccatgacatgaaattaatagagacacatgcaagcaaagta 15706154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 9355060 - 9355108
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagatta 49  Q
    |||| ||||| ||| |||| |||||||||||||||||||||||| ||||    
T  9355060 tcatggcaattttggaagaagttttatttcaagccatgacatgaaatta 9355108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 20831173 - 20831113
Alignment:
Q  53 aggacacattcaagcaaagtactataccaaacttataaagatattttgcactttatttctt 113  Q
    ||||||||||||||| ||| | |||  || | || ||||||||||||||||||||||||||    
T  20831173 aggacacattcaagccaagaattatgacacatttttaaagatattttgcactttatttctt 20831113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 27214592 - 27214544
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagatta 49  Q
    |||| ||||| ||| |||| |||||||||||||||||||||||| ||||    
T  27214592 tcatggcaattttggaagaagttttatttcaagccatgacatgaaatta 27214544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 27424580 - 27424640
Alignment:
Q  53 aggacacattcaagcaaagtactataccaaacttataaagatattttgcactttatttctt 113  Q
    ||||||||||||||| ||| | |||  || | || ||||||||||||||||||||||||||    
T  27424580 aggacacattcaagccaagaattatgacacatttttaaagatattttgcactttatttctt 27424640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 27439624 - 27439684
Alignment:
Q  53 aggacacattcaagcaaagtactataccaaacttataaagatattttgcactttatttctt 113  Q
    ||||||||||||||| ||| | |||  || | || ||||||||||||||||||||||||||    
T  27439624 aggacacattcaagccaagaattatgacacatttttaaagatattttgcactttatttctt 27439684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 2e-17; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 205
Target Start/End: Original strand, 22988865 - 22989061
Alignment:
Q  12 ttgaaagaggttttatttcaagccatgacatgagattagcaaggacacattcaagcaaagtactataccaaacttataaagatattttgcactttatttc 111  Q
    ||||||||| |||| |||||||||||||||||| ||||  |  |||| || |||||||||||  | |||||| | ||| ||| ||||  ||||||||| |    
T  22988865 ttgaaagagattttgtttcaagccatgacatgaaattaatagagacatatgcaagcaaagtatcacaccaaattcatagagaaatttgacactttattcc 22988964  T
Q  112 ttnnnnnnnncac--attgcttgcaaaacaagaaatttgcaaa-tcacatccaaaaacagtaagacaaacacatgatcagaggcatattcatcacaa 205  Q
    ||        |||  |||| |||||||||||||||||| |||| ||| |||||||||||| || |   |||||||||||||||||||||||||||||    
T  22988965 ttaagacaaacacttattgtttgcaaaacaagaaatttacaaaatcatatccaaaaacagcaaaaaggacacatgatcagaggcatattcatcacaa 22989061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 205
Target Start/End: Original strand, 23003932 - 23004128
Alignment:
Q  12 ttgaaagaggttttatttcaagccatgacatgagattagcaaggacacattcaagcaaagtactataccaaacttataaagatattttgcactttatttc 111  Q
    ||||||||| |||| |||||||||||||||||| ||||  |  |||| || |||||||||||  | |||||| | ||| ||| ||||  ||||||||| |    
T  23003932 ttgaaagagattttgtttcaagccatgacatgaaattaatagagacatatgcaagcaaagtatcacaccaaattcatagagaaatttgacactttattcc 23004031  T
Q  112 ttnnnnnnnncac--attgcttgcaaaacaagaaatttgcaaa-tcacatccaaaaacagtaagacaaacacatgatcagaggcatattcatcacaa 205  Q
    ||        |||  |||| |||||||||||||||||| |||| ||| |||||||||||| || |   |||||||||||||||||||||||||||||    
T  23004032 ttaagacaaacacttattgtttgcaaaacaagaaatttacaaaatcatatccaaaaacagcaaaaaggacacatgatcagaggcatattcatcacaa 23004128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 37295217 - 37295272
Alignment:
Q  162 aaaacagtaagacaaacacatgatcagaggcatattcatcacaagatggcatatca 217  Q
    |||||||||| ||||||||||||||||||||||||||||||||| || ||||||||    
T  37295217 aaaacagtaaaacaaacacatgatcagaggcatattcatcacaaaattgcatatca 37295272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 208
Target Start/End: Complemental strand, 23397032 - 23396949
Alignment:
Q  126 ttgcttgcaaaacaagaaatttgcaaa-tcacatccaaaaac-agtaagacaaacacatgatcagaggcatattcatcacaagat 208  Q
    |||||||||||||||||||||| |||| ||| |||||||||| || |||| || ||||||| |||||||||||||||||||||||    
T  23397032 ttgcttgcaaaacaagaaatttacaaaatcatatccaaaaaccagcaaga-aagcacatgaccagaggcatattcatcacaagat 23396949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 25210433 - 25210380
Alignment:
Q  162 aaaacagtaagacaaacacatgatcagaggcatattcatcacaagatggcatat 215  Q
    |||| ||||| ||||||||||||| |||||||||||||||||||||| ||||||    
T  25210433 aaaatagtaaaacaaacacatgattagaggcatattcatcacaagattgcatat 25210380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 25274588 - 25274535
Alignment:
Q  162 aaaacagtaagacaaacacatgatcagaggcatattcatcacaagatggcatat 215  Q
    |||| ||||| ||||||||||||| |||||||||||||||||||||| ||||||    
T  25274588 aaaatagtaaaacaaacacatgattagaggcatattcatcacaagattgcatat 25274535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 126 - 208
Target Start/End: Original strand, 9540795 - 9540878
Alignment:
Q  126 ttgcttgcaaaacaagaaatttgc-aaatcacatccaaaaa-cagtaagacaaacacatgatcagaggcatattcatcacaagat 208  Q
    |||||||||||||||||||||| | |||||| ||||||||| ||| |||| || ||||||| ||||||||||||||||| |||||    
T  9540795 ttgcttgcaaaacaagaaatttacaaaatcatatccaaaaaccagcaaga-aagcacatgaccagaggcatattcatcataagat 9540878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 126 - 208
Target Start/End: Original strand, 9553668 - 9553751
Alignment:
Q  126 ttgcttgcaaaacaagaaatttgc-aaatcacatccaaaaa-cagtaagacaaacacatgatcagaggcatattcatcacaagat 208  Q
    |||||||||||||||||||||| | |||||| ||||||||| ||| |||| || ||||||| ||||||||||||||||| |||||    
T  9553668 ttgcttgcaaaacaagaaatttacaaaatcatatccaaaaaccagcaaga-aagcacatgaccagaggcatattcatcataagat 9553751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 215
Target Start/End: Complemental strand, 25195012 - 25194970
Alignment:
Q  173 acaaacacatgatcagaggcatattcatcacaagatggcatat 215  Q
    ||||||||||||| |||||||||||||||||||||| ||||||    
T  25195012 acaaacacatgattagaggcatattcatcacaagattgcatat 25194970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 217
Target Start/End: Original strand, 20580563 - 20580607
Alignment:
Q  173 acaaacacatgatcagaggcatattcatcacaagatggcatatca 217  Q
    |||||||||| |||||||||||||||||||||| || ||||||||    
T  20580563 acaaacacataatcagaggcatattcatcacaaaatagcatatca 20580607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 42138132 - 42138084
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagatta 49  Q
    |||||||||| ||||||||| |||| |||||||||||||||||| ||||    
T  42138132 tcatagcaattttgaaagagattttgtttcaagccatgacatgaaatta 42138084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 215
Target Start/End: Original strand, 19864252 - 19864306
Alignment:
Q  161 aaaaacagtaagacaaacacatgatcagaggcatattcatcacaagatggcatat 215  Q
    ||||||||||| |||| || ||||||||  |||||||||||||||||| ||||||    
T  19864252 aaaaacagtaacacaagcatatgatcagtagcatattcatcacaagattgcatat 19864306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 215
Target Start/End: Complemental strand, 21500878 - 21500824
Alignment:
Q  161 aaaaacagtaagacaaacacatgatcagaggcatattcatcacaagatggcatat 215  Q
    ||||||||||| |||| || ||||||||  |||||||||||||||||| ||||||    
T  21500878 aaaaacagtaacacaagcatatgatcagtagcatattcatcacaagattgcatat 21500824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 30466319 - 30466368
Alignment:
Q  153 tcacatccaaaaacagtaagacaaacacatgatcagaggcatattcatca 202  Q
    ||||||||| ||||||||| ||| ||| |||||||||| |||||||||||    
T  30466319 tcacatccacaaacagtaaaacacacatatgatcagagacatattcatca 30466368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 208
Target Start/End: Original strand, 13175336 - 13175419
Alignment:
Q  126 ttgcttgcaaaacaagaaatttgcaaa-tcacatccaaaaacagt-aagacaaacacatgatcagaggcatattcatcacaagat 208  Q
    |||||||||||||||||||||| |||| ||| |||||||||| |  |||| || ||||||  ||||||||||||||||| |||||    
T  13175336 ttgcttgcaaaacaagaaatttacaaaatcaaatccaaaaaccggcaaga-aagcacatggccagaggcatattcatcataagat 13175419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 208
Target Start/End: Original strand, 13187681 - 13187764
Alignment:
Q  126 ttgcttgcaaaacaagaaatttgcaaa-tcacatccaaaaacagt-aagacaaacacatgatcagaggcatattcatcacaagat 208  Q
    |||||||||||||||||||||| |||| ||| |||||||||| |  |||| || ||||||  ||||||||||||||||| |||||    
T  13187681 ttgcttgcaaaacaagaaatttacaaaatcaaatccaaaaaccggcaaga-aagcacatggccagaggcatattcatcataagat 13187764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 24947199 - 24947139
Alignment:
Q  53 aggacacattcaagcaaagtactataccaaacttataaagatattttgcactttatttctt 113  Q
    ||||||||||||||| ||| | |||  || | || ||||||||||||||||||||||||||    
T  24947199 aggacacattcaagccaagaattatgacacatttttaaagatattttgcactttatttctt 24947139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 24980064 - 24980004
Alignment:
Q  53 aggacacattcaagcaaagtactataccaaacttataaagatattttgcactttatttctt 113  Q
    ||||||||||||||| ||| | |||  || | || ||||||||||||||||||||||||||    
T  24980064 aggacacattcaagccaagaattatgacacatttttaaagatattttgcactttatttctt 24980004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 37727213 - 37727141
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagattagcaaggacacattcaagcaaagta 73  Q
    |||| ||||| ||||||||  |||| |||||||||||||||||| ||||  |  ||||||| |||||||||||    
T  37727213 tcatggcaattttgaaagaaattttgtttcaagccatgacatgaaattaatagagacacatgcaagcaaagta 37727141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 122 - 217
Target Start/End: Complemental strand, 22445 - 22350
Alignment:
Q  122 cacattgcttgcaaaacaagaaatttgcaaatcacatccaaaaacagta-agacaaacacatgatcagaggcatattcatcacaagatggcatatca 217  Q
    |||||| ||||||| |||||||||| ||||||||||| ||||||||||| | |||||||||||||||||| |||||||| ||| | || ||||||||    
T  22445 cacattacttgcaacacaagaaattagcaaatcacat-caaaaacagtacaaacaaacacatgatcagagacatattcaccacgaaattgcatatca 22350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 11478 - 11533
Alignment:
Q  162 aaaacagtaagacaaacacatgatcagaggcatattcatcacaagatggcatatca 217  Q
    |||||||||| ||||||||||||||||||||||||||||||||| || ||||||||    
T  11478 aaaacagtaaaacaaacacatgatcagaggcatattcatcacaaaattgcatatca 11533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 217
Target Start/End: Complemental strand, 26166 - 26111
Alignment:
Q  162 aaaacagtaagacaaacacatgatcagaggcatattcatcacaagatggcatatca 217  Q
    |||||||||| ||||||||||||||||||||||||||||||||| || ||||||||    
T  26166 aaaacagtaaaacaaacacatgatcagaggcatattcatcacaaaattgcatatca 26111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0252 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0252
Description:

Target: scaffold0252; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 591 - 798
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagattagcaaggacacattcaagcaaagtactataccaaacttataaagatattttg 100  Q
    |||| ||||| ||| ||||| |||| |||||||||||||||||| ||||  |  ||||||| |||||||||||  | |||||| | ||| ||| |||| |    
T  591 tcatggcaattttgtaagagattttgtttcaagccatgacatgaaattaatagagacacatgcaagcaaagtatcacaccaaattcatagagaaatttgg 690  T
Q  101 cactttatttcttnnnnnnnncac--attgcttgcaaaacaagaaatttgc-aaatcacatccaaaaacagtaagacaaacacatgatcagaggcatatt 197  Q
    ||||||||| |||        |||   |||||||||||||||||||||  | |||||| |||||||||||| || |    ||||||| ||||||||||||    
T  691 cactttattccttaagacaaacacttgttgcttgcaaaacaagaaattaacaaaatcatatccaaaaacagcaaaaagggcacatgaccagaggcatatt 790  T
Q  198 catcacaa 205  Q
    ||||||||    
T  791 catcacaa 798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 126 - 217
Target Start/End: Complemental strand, 24804 - 24713
Alignment:
Q  126 ttgcttgcaaaacaagaaatttgcaaa-tcacatccaaaaacagtaagacaaacacatgatcagaggcatattcatcacaagatggcatatca 217  Q
    |||||||||||||||||||||| |||| |||||||||||| ||| ||   || |||||||||||||||| |||||||| || || ||||||||    
T  24804 ttgcttgcaaaacaagaaatttacaaaatcacatccaaaa-cagcaaagaaatcacatgatcagaggcacattcatcataatattgcatatca 24713  T

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Target: scaffold1179 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1179
Description:

Target: scaffold1179; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 431 - 503
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagattagcaaggacacattcaagcaaagta 73  Q
    |||||||||| ||||||||| |||| |||||||||||||||||| ||||  |  |||| || |||||||||||    
T  431 tcatagcaattttgaaagagattttgtttcaagccatgacatgaaattaatagagacaaatgcaagcaaagta 503  T

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Target: scaffold0062 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 54994 - 55066
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagattagcaaggacacattcaagcaaagta 73  Q
    |||| ||||| ||| |||||||||| |||||||||||||||||| ||||  |  ||||||| |||||||||||    
T  54994 tcatggcaattttgtaagaggttttgtttcaagccatgacatgaaattaatagagacacatgcaagcaaagta 55066  T

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Target: scaffold0393 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 202
Target Start/End: Complemental strand, 6687 - 6534
Alignment:
Q  52 aaggacacattcaagcaaagtactataccaaacttataaagatattttgcactttatttcttnnnnnnnncaca--ttgcttgcaaaacaagaaatttgc 149  Q
    |||||||||||||||| ||| | |||  || | || || |||||||||||||||||||||||        ||||  || |||||||||||||||| |       
T  6687 aaggacacattcaagccaagaattatgacatatttgtagagatattttgcactttatttcttgacaaaaacacacattacttgcaaaacaagaaaatgaa 6588  T
Q  150 aaatcacatc-caaaaacagtaagacaaacacatgatcagaggcatattcatca 202  Q
    || ||||||| || ||||||||| ||| ||| |||||||||| |||||||||||    
T  6587 aattcacatcacacaaacagtaaaacacacatatgatcagagacatattcatca 6534  T

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Target: scaffold0134 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 202
Target Start/End: Complemental strand, 22913 - 22831
Alignment:
Q  122 cacattgcttgcaaaacaagaaatt-tgcaaat-cacatccaaaaacagtaagacaaacacatgatcagaggcatattcatca 202  Q
    |||||| ||||||||||||||||   || |||| |||||||| ||||||||| ||| ||| |||||||||| |||||||||||    
T  22913 cacattacttgcaaaacaagaaaaaatgaaaattcacatccacaaacagtaaaacacacatatgatcagagacatattcatca 22831  T

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Target: scaffold0667 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0667
Description:

Target: scaffold0667; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 7462 - 7510
Alignment:
Q  1 tcatagcaatcttgaaagaggttttatttcaagccatgacatgagatta 49  Q
    |||| ||||| ||| |||| |||||||||||||||||||||||| ||||    
T  7462 tcatggcaattttggaagaagttttatttcaagccatgacatgaaatta 7510  T

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