View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15512_low_2 (Length: 731)
Name: NF15512_low_2
Description: NF15512
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15512_low_2 |
 | |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] scaffold0475 (1 HSPs) |
| | |
|
| [»] scaffold0199 (1 HSPs) |
| | |
|
| [»] scaffold0477 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 587; Significance: 0; HSPs: 33)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 587; E-Value: 0
Query Start/End: Original strand, 13 - 709
Target Start/End: Complemental strand, 3173591 - 3172895
Alignment:
| Q |
13 |
aatatcaaagatgagtaactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaa |
112 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3173591 |
aatatcaaagatgagtaactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaa |
3173492 |
T |
|
| Q |
113 |
ctacttcactttagaggctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttca |
212 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3173491 |
ctacttcactttagaggctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttca |
3173392 |
T |
|
| Q |
213 |
atgattttacctttgagactataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaa |
312 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3173391 |
atgattttaactttgagactataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaa |
3173292 |
T |
|
| Q |
313 |
gaactttcatcgcttttttcgtgaactttttgctaaacttcatgattctgcaacttctggtcttatacctccagttacttgctttgtttccgattgctat |
412 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3173291 |
gaactttcatcgcttttttcgtgaactttttgctaaacttcacgattctgcaactgctggtcttatacctccagttacttgctttgtttccgattgctat |
3173192 |
T |
|
| Q |
413 |
atgccatttacagtagatgttgctgaagaacattcactcccaattgttctattttcgccatgtagtgcttgtttcttcttggctggttttcatattccta |
512 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
3173191 |
atgccatttacagtagatgttgctgaagaacatgctctcccaattgttctattttcgccgtgtagtgcatgtttcttcttggctggttttcatattccta |
3173092 |
T |
|
| Q |
513 |
aactgtttcagaatggtttactgccactcaaaggtaatatcatttataatccctttttcttccaaagagannnnnnnnnnnnnnnnnnnnnncgcgtatc |
612 |
Q |
| |
|
|| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
3173091 |
aattgtttcagaatggtctactaccactcaaaggtaatatcatttataatccctttttcttccaaagagatgtgtgtatgtatgtgtgtgtgcgcgtatc |
3172992 |
T |
|
| Q |
613 |
aaggttctttaaaaaggtccgcgaacgcaatatggaccgaacatttataatcgcatttgaagttgcatcagccacatttggttgtgattatacacaa |
709 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
3172991 |
aaggttctttaaaaaggtccgcgaacgcaatatggaccgaacatttataatcgcatttgaagttgcatcagccacatttggttgcgattatacacaa |
3172895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 13 - 550
Target Start/End: Original strand, 4488737 - 4489274
Alignment:
| Q |
13 |
aatatcaaagatgagtaactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaa |
112 |
Q |
| |
|
||||||||||||||||||||||| | ||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
4488737 |
aatatcaaagatgagtaactttgaagagagaaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaa |
4488836 |
T |
|
| Q |
113 |
ctacttcactttagaggctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttca |
212 |
Q |
| |
|
||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| | |
|
|
| T |
4488837 |
ctacttcaccttagaggatttcacataacctttgtcaacactgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttaa |
4488936 |
T |
|
| Q |
213 |
atgattttacctttgagactataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaa |
312 |
Q |
| |
|
|||||||| |||||||||||| ||||||||||||||| ||| || |||||||| |||||||||||||| |||||||||||||||| ||||||||| || |
|
|
| T |
4488937 |
ctgattttagctttgagactattccagatggtttaactccaacagatggtgatggcgatgttagtcaagatttacgcgctctttgtctatcaatcatgaa |
4489036 |
T |
|
| Q |
313 |
gaactttcatcgcttttttcgtgaactttttgctaaacttcatgattctgcaacttctggtcttatacctccagttacttgctttgtttccgattgctat |
412 |
Q |
| |
|
|| ||||| | || ||| ||| | || ||||||||||| |||| ||||| ||| |||||||||| ||||||||||||||||| ||||| |||||| || |
|
|
| T |
4489037 |
caattttcaccaattctttggtgtatttcttgctaaacttaatgactctgctactgctggtcttatccctccagttacttgcttagtttctgattgcaat |
4489136 |
T |
|
| Q |
413 |
atgccatttacagtagatgttgctgaagaacattcactcccaattgttctattttcgccatgtagtgcttgtttcttcttggctggttttcatattccta |
512 |
Q |
| |
|
||| ||||||||||||||| ||||||||||||| |||||||||||||||| ||||| ||||||||||| | || ||||| || |||||| ||| ||| |
|
|
| T |
4489137 |
atggcatttacagtagatgctgctgaagaacatgcactcccaattgttctcttttccccatgtagtgcatcttacttctactctacttttcacattacta |
4489236 |
T |
|
| Q |
513 |
aactgtttcagaatggtttactgccactcaaaggtaat |
550 |
Q |
| |
|
|| |||||||||||||| | || ||||||||||||||| |
|
|
| T |
4489237 |
aattgtttcagaatggtgtgctaccactcaaaggtaat |
4489274 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 13 - 485
Target Start/End: Complemental strand, 4576043 - 4575571
Alignment:
| Q |
13 |
aatatcaaagatgagtaactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaa |
112 |
Q |
| |
|
|||||||| ||||||||||||| | ||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
4576043 |
aatatcaatcatgagtaactttgaagagaaaaagccacatgcagtgttaactccatttccagttcaaggccatatcaatgcattgttgaaaatagcaaaa |
4575944 |
T |
|
| Q |
113 |
ctacttcactttagaggctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttca |
212 |
Q |
| |
|
|| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||| |
|
|
| T |
4575943 |
ctgcttcaccttagaggctttcacataacctttgttaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttca |
4575844 |
T |
|
| Q |
213 |
atgattttacctttgagactataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaa |
312 |
Q |
| |
|
||| |||| |||||||||||||||||||||||||||| ||| ||| ||| |||||||||| ||||||||| ||| | ||||| || ||||||||| | |
|
|
| T |
4575843 |
ctgactttaactttgagactataccagatggtttaactccaaaggatggtaatggtgatgtaagtcaagacctacactctcttggtgaatcaatcataac |
4575744 |
T |
|
| Q |
313 |
gaactttcatcgcttttttcgtgaactttttgctaaacttcatgattctgcaacttctggtcttatacctccagttacttgctttgtttccgattgctat |
412 |
Q |
| |
|
|||||||| | ||| ||| ||||||| ||||||||||||| || ||||| ||| |||||||||| || ||||| |||||||| ||||| |||||||| |
|
|
| T |
4575743 |
gaactttcgccacttctttgatgaacttcttgctaaacttcaagactctgccactgctggtcttatccccccagtcacttgcttagtttctgattgctac |
4575644 |
T |
|
| Q |
413 |
atgccatttacagtagatgttgctgaagaacattcactcccaattgttctattttcgccatgtagtgcttgtt |
485 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| | |||||||||||||| ||||| ||||||||||| |||| |
|
|
| T |
4575643 |
atgccatttacagtagatgctgctgaagaacatgccctcccaattgttcttttttccccatgtagtgcatgtt |
4575571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 10 - 582
Target Start/End: Complemental strand, 4482456 - 4481885
Alignment:
| Q |
10 |
aagaatatcaaagatgagtaactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagca |
109 |
Q |
| |
|
|||||||||||||||||||||||||||| | | |||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||| ||| | |
|
|
| T |
4482456 |
aagaatatcaaagatgagtaactttgcagaaaaaaaaccacatgcagtgttgactccatttccagctcaaggccatatcaatgcattgttgaaaatagga |
4482357 |
T |
|
| Q |
110 |
aaactacttcactttagaggctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtt |
209 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||| ||||||| ||||||||| ||||||||||||| |
|
|
| T |
4482356 |
aaactacttcaccttagaggctttcacataacctttgtcaacaccgaatacaatcacaaacgtttgctaaaatcaaggggtccaaaagcctttgatggtt |
4482257 |
T |
|
| Q |
210 |
tcaatgattttacctttgagactataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcat |
309 |
Q |
| |
|
||| ||||||||||||||| || |||||||||||||||||| |||| |||||||||| ||| || |||||||||||| | ||||| || ||||||||| |
|
|
| T |
4482256 |
tcactgattttacctttgaaacgataccagatggtttaactccaattgaaggtgatgatgaagtaagtcaagacttattctctcttactcaatcaatcat |
4482157 |
T |
|
| Q |
310 |
caagaactttcatcgcttttttcgtgaactttttgctaaacttcatgattctgcaacttctggtcttatacctccagttacttgctttgtttccgattgc |
409 |
Q |
| |
|
| |||||||| | ||| ||| |||| || | |||||||||||||| ||||| ||| ||||| |||| || ||||| |||||||| ||||| |||||| |
|
|
| T |
4482156 |
gacgaactttcgccacttctttgatgaatttctggctaaacttcatgaatctgccactgctggtattatccccccagtcacttgcttagtttctgattgc |
4482057 |
T |
|
| Q |
410 |
tatatgccatttacagtagatgttgctgaagaacattcactcccaattgttctattttcgccatgtagtgcttgtttcttcttggctggttttcatattc |
509 |
Q |
| |
|
|| ||||||||||||||||||| ||| ||||||||| |||||||||||||||| ||||| || ||||| |||| ||| | || || | |||| |
|
|
| T |
4482056 |
tacatgccatttacagtagatgctgccgaagaacatgcactcccaattgttctcttttccccggtcagtgcatgttacttactctctacttctttgattc |
4481957 |
T |
|
| Q |
510 |
ctaaactgtttcagaatggtttactgccactcaaaggtaatatcatttataatccctttttcttccaaagaga |
582 |
Q |
| |
|
||||| |||||||||||||| | || |||||||||||| ||||||||||| || ||||||||| | |||||| |
|
|
| T |
4481956 |
ctaaattgtttcagaatggtgtgctaccactcaaaggt-atatcatttatgttctctttttctttctaagaga |
4481885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 13 - 550
Target Start/End: Complemental strand, 4562254 - 4561713
Alignment:
| Q |
13 |
aatatcaaagatgagtaactttgcaaagagaaaaccacatgcagtgttaa----ctccatatccagttcaaggccatatcaatgcattgttgaaactagc |
108 |
Q |
| |
|
||||||||| |||| ||||||| | ||| || |||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||| |||| |
|
|
| T |
4562254 |
aatatcaaacatgaccaactttgaagagaaaaggccacatgcagtgttaattaactccatttccagttcaaggtcatatcaatgcattgttgaaaatagc |
4562155 |
T |
|
| Q |
109 |
aaaactacttcactttagaggctttcacataa-cctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatgg |
207 |
Q |
| |
|
|||||| |||||| | |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||| ||||||| ||| ||||||||||||||| |
|
|
| T |
4562154 |
aaaactgcttcacctaagaggctttcacataaacctttgttaacactgaatacaatcacaaacgtttgct-aaatcaagaggtgaaaatgcctttgatgg |
4562056 |
T |
|
| Q |
208 |
tttcaatgattttacctttgagactataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatc |
307 |
Q |
| |
|
||||| ||| |||| |||||||||||||||||||||||||||| ||| ||| |||||||||||| ||||||||||| ||| | ||||| || ||||||| |
|
|
| T |
4562055 |
tttcactgactttaactttgagactataccagatggtttaactccaaaggatggtgatggtgatattagtcaagacctacactctcttggtgaatcaatc |
4561956 |
T |
|
| Q |
308 |
atcaagaactttcatcgcttttttcgtgaactttttgctaaacttcatgattctgcaacttctggtcttatacctccagttacttgctttgtttccgatt |
407 |
Q |
| |
|
|| | ||||||||| | ||| ||| ||||||| ||||||||||||| || ||||| ||| |||||||||| || ||||| |||||||| ||||| |||| |
|
|
| T |
4561955 |
ataacgaactttcaccacttctttgatgaacttcttgctaaacttcaagactctgccactgctggtcttatccccccagtcacttgcttagtttctgatt |
4561856 |
T |
|
| Q |
408 |
gctatatgccatttacagtagatgttgctgaagaacattcactcccaattgttctattttcgccatgtagtgcttgtttcttcttggctggttttcatat |
507 |
Q |
| |
|
|||| |||||||||||||||| || ||||||||||||| |||||||| ||||||| ||||| ||| |||| || |||| ||||||||| |||| | | |
|
|
| T |
4561855 |
gctacatgccatttacagtagctgctgctgaagaacatgcactcccagttgttcttttttccccaagtagagcatgttatttcttggcttgtttgctcag |
4561756 |
T |
|
| Q |
508 |
tcctaaactgtttcagaatggtttactgccactcaaaggtaat |
550 |
Q |
| |
|
||||||| ||| ||||||| || ||| ||| ||||||||||| |
|
|
| T |
4561755 |
tcctaaaatgtatcagaatagtcaactaccattcaaaggtaat |
4561713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 123 - 550
Target Start/End: Original strand, 4502943 - 4503370
Alignment:
| Q |
123 |
ttagaggctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttac |
222 |
Q |
| |
|
||||||| ||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
4502943 |
ttagaggatttcacataacctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcaatgattttac |
4503042 |
T |
|
| Q |
223 |
ctttgagactataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaagaactttcat |
322 |
Q |
| |
|
||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| | || |||||||| ||||| ||||| |
|
|
| T |
4503043 |
ctttgagaccataccagatggtttaactccggtggaaggtgatggtgatgttagtcaagacttacgcgctctctatctatcaatcaagaagaattttcac |
4503142 |
T |
|
| Q |
323 |
cgcttttttcgtgaactttttgctaaacttcatgattctgcaacttctggtcttatacctccagttacttgctttgtttccgattgctatatgccattta |
422 |
Q |
| |
|
| || ||| ||||| || ||| ||||||| |||| ||||| ||| |||||||||| ||||||||||||||||| ||||| |||||| | ||||||||| |
|
|
| T |
4503143 |
caattctttggtgaatttcttgttaaacttaatgactctgccactgctggtcttatccctccagttacttgcttagtttctgattgcaacatgccatttc |
4503242 |
T |
|
| Q |
423 |
cagtagatgttgctgaagaacattcactcccaattgttctattttcgccatgtagtgcttgtttcttcttggctggttttcatattcctaaactgtttca |
522 |
Q |
| |
|
||||| ||| ||||||||||||| |||||||||||||||| |||| ||||||||||| | || ||||| || |||||| ||| ||||| ||||||| |
|
|
| T |
4503243 |
cagtatatgctgctgaagaacatacactcccaattgttctcgtttccccatgtagtgcatcttacttctactctacttttcacattgctaaattgtttca |
4503342 |
T |
|
| Q |
523 |
gaatggtttactgccactcaaaggtaat |
550 |
Q |
| |
|
||| || | || ||||||||||||||| |
|
|
| T |
4503343 |
caatagtatgctaccactcaaaggtaat |
4503370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 43 - 394
Target Start/End: Complemental strand, 4558683 - 4558332
Alignment:
| Q |
43 |
aaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactttagaggctttcacataacc |
142 |
Q |
| |
|
|||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||| |||||||||||| |
|
|
| T |
4558683 |
aaaaccacatgctgtgttaattccatatccagttcaaggccatatcaatccattgttgaaactagcaaaacttcttcaccttagaggatttcacataacc |
4558584 |
T |
|
| Q |
143 |
tttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacctttgagactataccagatg |
242 |
Q |
| |
|
| |||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||| |||||||||||| || |||| |
|
|
| T |
4558583 |
tatgtaaacactgaatacaaccacaaacggttgctcaagtcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattccggatg |
4558484 |
T |
|
| Q |
243 |
gtttaacttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaagaactttcatcgcttttttcgtgaactttt |
342 |
Q |
| |
|
|||||||| ||| ||| |||||||| ||||||||||||||| | |||||||||| |||||||| |||||||| | | ||| || |||||| | |
|
|
| T |
4558483 |
gtttaactccaacggatggtgatggcgatgttagtcaagacatttacgctctttgtaaatcaatcagaaagaacttcctacaacctttccgcgaacttct |
4558384 |
T |
|
| Q |
343 |
tgctaaacttcatgattctgcaacttctggtcttatacctccagttacttgc |
394 |
Q |
| |
|
||||| ||| |||| |||||||| ||||||||| | ||||||||||||||| |
|
|
| T |
4558383 |
tgctagactaaatgactctgcaacatctggtcttgtccctccagttacttgc |
4558332 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 22 - 468
Target Start/End: Complemental strand, 4627732 - 4627283
Alignment:
| Q |
22 |
gatgagtaactttgcaaagagaa---aaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactactt |
118 |
Q |
| |
|
||||||||||||||||||||||| | |||||||| ||||| | ||||| |||| ||||||||||||||||| ||||||||| |||||||||| ||||| |
|
|
| T |
4627732 |
gatgagtaactttgcaaagagaatcaagccacatgctgtgttgattccatttccacttcaaggccatatcaatccattgttgatactagcaaaattactt |
4627633 |
T |
|
| Q |
119 |
cactttagaggctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgatt |
218 |
Q |
| |
|
||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||| |||||| |
|
|
| T |
4627632 |
caccttagaggctttcacataacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgatt |
4627533 |
T |
|
| Q |
219 |
ttacctttgagactataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaagaactt |
318 |
Q |
| |
|
||||||||||||| ||||||||||||||||| || | ||||||||||| ||||||| ||||||| ||| |||||| | |||||| | |||||||| |
|
|
| T |
4627532 |
ttacctttgagaccataccagatggtttaacaccactagaaggtgatggcgatgttactcaagacataccatctctttcccaatcaataagaaagaactt |
4627433 |
T |
|
| Q |
319 |
tcatcgcttttttcgtgaactttttgctaaacttcatgattctgcaacttctggtcttatacctccagttacttgctttgtttccgattgctatatgcca |
418 |
Q |
| |
|
| || ||| |||||||| |||||||||||||||| || || ||| |||||||| | | |||||||||||||| ||||| ||||| | ||| || |
|
|
| T |
4627432 |
ccttcagccctttggtgaacttcttgctaaacttcatgactcagccactgctggtcttgttgcaccagttacttgcttagtttcagattgtttaatgtca |
4627333 |
T |
|
| Q |
419 |
tttacagtagatgttgctgaagaacattcactcccaattgttctattttc |
468 |
Q |
| |
|
||||| || | | ||||||||||||| |||||||||||| ||| ||||| |
|
|
| T |
4627332 |
tttaccatacaagctgctgaagaacatgcactcccaattgctctcttttc |
4627283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 16 - 285
Target Start/End: Complemental strand, 4507496 - 4507227
Alignment:
| Q |
16 |
atcaaagatgagtaactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaacta |
115 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||| ||||| | |||||||||| |||||||||||||||| ||||||| |||||||| || || |
|
|
| T |
4507496 |
atcaaagatgagtaattttgcaaagagaaaaccacatgctgtgttgattccatatccaactcaaggccatatcaatccattgttcaaactagctaagctt |
4507397 |
T |
|
| Q |
116 |
cttcactttagaggctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatg |
215 |
Q |
| |
|
|||||| || |||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||| || |
|
|
| T |
4507396 |
cttcaccttcgaggctttcacataacctttgttaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtgaaaatgcctttgatggtttcactg |
4507297 |
T |
|
| Q |
216 |
attttacctttgagactataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaagactt |
285 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||||| ||||||| |||||||||||||||| || |||||| |
|
|
| T |
4507296 |
attttaactttgagactctaccagatggtttaactccaatggatggtgatggtgatgttaatccagactt |
4507227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 43 - 393
Target Start/End: Complemental strand, 4587190 - 4586840
Alignment:
| Q |
43 |
aaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactttagaggctttcacataacc |
142 |
Q |
| |
|
|||||| ||||| ||||||| |||| |||||||||||||||||||||| |||||||||||||||| ||||| |||||| || |||| |||||||||||| |
|
|
| T |
4587190 |
aaaacctcatgctgtgttaatcccatctccagttcaaggccatatcaatccattgttgaaactagctaaacttcttcaccttcgaggatttcacataacc |
4587091 |
T |
|
| Q |
143 |
tttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacctttgagactataccagatg |
242 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| || |||| | ||||||||||||||||| ||| | |||||||| |||||||||||| ||||||| |
|
|
| T |
4587090 |
tttgtaaacactgaatacaatcacaaacggttgcttaagtcaagagctccaaatgcctttgatgatttaactgattttagctttgagactattccagatg |
4586991 |
T |
|
| Q |
243 |
gtttaacttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaagaactttcatcgcttttttcgtgaactttt |
342 |
Q |
| |
|
|||||||| ||| ||| |||||||||||||||||||||||| | |||||||||| |||||||| |||||||| | | ||| || |||||| | |
|
|
| T |
4586990 |
gtttaactccaacggatggtgatggtgatgttagtcaagacatttacgctctttgtaaatcaatcagaaagaacttcctacaacctttccgcgaacttct |
4586891 |
T |
|
| Q |
343 |
tgctaaacttcatgattctgcaacttctggtcttatacctccagttacttg |
393 |
Q |
| |
|
||||| |||| |||| |||||||| ||||||||||| |||||||| ||||| |
|
|
| T |
4586890 |
tgctagacttaatgactctgcaacatctggtcttatccctccagtcacttg |
4586840 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 47 - 549
Target Start/End: Complemental strand, 4623861 - 4623359
Alignment:
| Q |
47 |
ccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactttagaggctttcacataacctttg |
146 |
Q |
| |
|
|||||||| ||||| | | |||||||||||||||| ||||||||| ||||||| ||||||||||| || ||| || ||| |||||||||||||||||||| |
|
|
| T |
4623861 |
ccacatgctgtgttgattgcatatccagttcaaggtcatatcaatccattgttcaaactagcaaagcttctttaccttaaaggctttcacataacctttg |
4623762 |
T |
|
| Q |
147 |
taaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacctttgagactataccagatggttt |
246 |
Q |
| |
|
|||| ||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||| || |||| ||||||||| || ||||||||||| |
|
|
| T |
4623761 |
gtcacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaggcctttgatggtttcacggactttaactttgagaccattccagatggttt |
4623662 |
T |
|
| Q |
247 |
aacttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaagaa---ctttcatcgcttttttcgtgaacttttt |
343 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||| ||| | |||||| | ||||| | ||||| || ||||| ||||| |||||||| || |
|
|
| T |
4623661 |
aacaccaatggaaggtgatggtgatgttagtcaagacataccctctctttctgattcaataaggaagaatttctatcatccctttt---gtgaacttctt |
4623565 |
T |
|
| Q |
344 |
gctaaacttcatgattctgcaacttctggtcttatacctccagttacttgctttgtttccgattgctatatgccatttacagtagatgttgctgaagaac |
443 |
Q |
| |
|
|| ||||||||||| ||||| ||| |||||||| | || |||||||||||||| ||||||||||| || ||| |||||||| || | | ||||||||| | |
|
|
| T |
4623564 |
gcaaaacttcatgactctgccactgctggtcttgttccaccagttacttgcttagtttccgattgttacatgtcatttacaatacaagctgctgaagagc |
4623465 |
T |
|
| Q |
444 |
attcactcccaattgttctattttcgccatgtagtgcttgtttcttcttggctggttttcatattcctaaactgtttcagaatggtttactgccactcaa |
543 |
Q |
| |
|
|| |||||||||||||| | || || ||| |||||| || ||||||| ||| ||| || ||| || ||||||| |||| ||| || | |||||||| |
|
|
| T |
4623464 |
atgcactcccaattgttttcttctccccagctagtgcaagtaccttcttgtctgttttacactttcatacactgtttgagaaaggtctaataccactcaa |
4623365 |
T |
|
| Q |
544 |
aggtaa |
549 |
Q |
| |
|
|||||| |
|
|
| T |
4623364 |
aggtaa |
4623359 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 47 - 283
Target Start/End: Complemental strand, 4517894 - 4517658
Alignment:
| Q |
47 |
ccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactttagaggctttcacataacctttg |
146 |
Q |
| |
|
|||||||||||| |||||||||||||| ||||||||||||||||| | ||||| |||||||||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
4517894 |
ccacatgcagtgataactccatatccacttcaaggccatatcaatccgttgttaaaactagcaaaacttcttcatcttagaggctttcacataacctttg |
4517795 |
T |
|
| Q |
147 |
taaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacctttgagactataccagatggttt |
246 |
Q |
| |
|
| ||||| ||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||| |
|
|
| T |
4517794 |
tcaacaccgaatacaatcacaaacgtttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggttt |
4517695 |
T |
|
| Q |
247 |
aacttcaatggaaggtgatggtgatgttagtcaagac |
283 |
Q |
| |
|
|||| | || ||||| ||||||||||||||||||||| |
|
|
| T |
4517694 |
aactccgatagaaggcgatggtgatgttagtcaagac |
4517658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 15 - 282
Target Start/End: Complemental strand, 4618887 - 4618620
Alignment:
| Q |
15 |
tatcaaagatgagtaactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaact |
114 |
Q |
| |
|
||||||| ||| | ||||||||||| ||||||||||||| ||| | | |||||||||||||||||||||||||||| ||||||| ||||||||||| || |
|
|
| T |
4618887 |
tatcaaaaatgggaaactttgcaaacagaaaaccacatgttgtgatgattccatatccagttcaaggccatatcaatccattgttcaaactagcaaagct |
4618788 |
T |
|
| Q |
115 |
acttcactttagaggctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaat |
214 |
Q |
| |
|
|||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||| |||||||| || ||||||||||||| |
|
|
| T |
4618787 |
tcttcaccttagaggctttcacataacctttgttaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaggcttttgatggtttcacg |
4618688 |
T |
|
| Q |
215 |
gattttacctttgagactataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaaga |
282 |
Q |
| |
|
|| |||| |||||||| || |||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
4618687 |
gactttaactttgagagcattccagatggtttaacaccaatggaaggtgatggtgatgttagtcaaga |
4618620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 43 - 390
Target Start/End: Original strand, 4612288 - 4612641
Alignment:
| Q |
43 |
aaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactttagaggctttcacataacc |
142 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||| |||| | |||||||||||||| |||||| ||||||||||||||||||| |
|
|
| T |
4612288 |
aaaaccacatgcagtgttaattccatatccagttcaaggccatatcaatccattaatcaaactagcaaaacttcttcaccttagaggctttcacataaca |
4612387 |
T |
|
| Q |
143 |
tttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacctttgagactataccagatg |
242 |
Q |
| |
|
|| || ||||| ||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||| |||||||||||||||| |||||||||||| |
|
|
| T |
4612388 |
ttcgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgttggtttcactgattttacctttgaggctataccagatg |
4612487 |
T |
|
| Q |
243 |
gtttaacttcaatggaa------ggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaagaactttcatcgcttttttcgtga |
336 |
Q |
| |
|
|| || |||||| ||| |||||||||||||||||||||||| || ||||||||| |||||||| |||||||| | | |||||| || |
|
|
| T |
4612488 |
gtctaccttcaaacgaaggcgatggtgatggtgatgttagtcaagacatatatgctctttgtgaatcaatcagaaagaacttcctacaaccttttcgcga |
4612587 |
T |
|
| Q |
337 |
actttttgctaaacttcatgattctgcaacttctggtcttatacctccagttac |
390 |
Q |
| |
|
|||| || ||| |||| |||| ||||| |||||||||||| | ||||| ||||| |
|
|
| T |
4612588 |
acttatttctagacttaatgactctgccacttctggtcttgtccctccggttac |
4612641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 43 - 394
Target Start/End: Complemental strand, 4572524 - 4572173
Alignment:
| Q |
43 |
aaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactttagaggctttcacataacc |
142 |
Q |
| |
|
|||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||| | |||||| ||||||| |||||||||||| |
|
|
| T |
4572524 |
aaaaccacatgctgtgttaatcccatatccagttcaaggccatatcaatccattgttgcaactagcaaaatttcttcaccttagaggttttcacataacc |
4572425 |
T |
|
| Q |
143 |
tttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacctttgagactataccagatg |
242 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||| |||||| |||||||| ||| ||||||| |
|
|
| T |
4572424 |
tatgtaaacactgaatacaatcacaaacggttgctcaagtcaagaggtcaaaatgcctttgatggtttcaccaattttaactttgagagtattccagatg |
4572325 |
T |
|
| Q |
243 |
gtttaacttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaagaactttcatcgcttttttcgtgaactttt |
342 |
Q |
| |
|
||||| || ||| ||| || ||||| ||||||||||||||| | |||||||||| |||||||| ||||| |||| | ||| || |||||| | |
|
|
| T |
4572324 |
gtttatctccaacggatggcgatggcgatgttagtcaagacatttacgctctttgtaaatcaatcaggaagaattttctacaacctttccgcgaacttct |
4572225 |
T |
|
| Q |
343 |
tgctaaacttcatgattctgcaacttctggtcttatacctccagttacttgc |
394 |
Q |
| |
|
||||| |||| |||| |||||||| ||||||||| | | |||||||| |||| |
|
|
| T |
4572224 |
tgctagacttaatgactctgcaacatctggtcttgtccgtccagttagttgc |
4572173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 16 - 468
Target Start/End: Complemental strand, 4471499 - 4471050
Alignment:
| Q |
16 |
atcaaagatgagtaactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaacta |
115 |
Q |
| |
|
|||||| |||||||| |||||||||| ||| |||||||| || || | ||||| ||||| |||||||||||||||||||||||||||||||||||| || |
|
|
| T |
4471499 |
atcaaatatgagtaattttgcaaagacaaagccacatgctgtattgattccatgtccagctcaaggccatatcaatgcattgttgaaactagcaaagctt |
4471400 |
T |
|
| Q |
116 |
cttcactttagaggctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatg |
215 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||| |||| ||||| || | |||||||||||| || |
|
|
| T |
4471399 |
cttcaccttagaggctttcacataacgtttgtcaacactgaatacaatcacaaagccttgctcaattcaagaggtcctgattctcttgatggtttcactg |
4471300 |
T |
|
| Q |
216 |
attttacctttgagactataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaagaa |
315 |
Q |
| |
|
| |||| ||||||||| || ||| ||||||| ||| |||||||| | ||||||| ||| ||||||| ||| | | ||| |||||||||||| | | | |
|
|
| T |
4471299 |
actttaactttgagaccattccaaatggttttactgcaatggaaag---tggtgatcttattcaagacatacactccttttttcgatcaatcatgacgga |
4471203 |
T |
|
| Q |
316 |
ctttcatcgcttttttcgtgaactttttgctaaacttcatgattctgcaacttctggtcttatacctccagttacttgctttgtttccgattgctatatg |
415 |
Q |
| |
|
||| | || ||| |||||||| || ||| |||| ||| ||||| ||| |||||||||| ||||||||||||||| | |||| ||||| || ||| |
|
|
| T |
4471202 |
cttccttcaaccctttggtgaacttcttactagacttgatgcctctgccactgctggtcttatccctccagttacttgcataatttctgattgttacatg |
4471103 |
T |
|
| Q |
416 |
ccatttacagtagatgttgctgaagaacattcactcccaattgttctattttc |
468 |
Q |
| |
|
|||||||||||||||| ||||||||||| | |||||||||| ||||| ||||| |
|
|
| T |
4471102 |
ccatttacagtagatgctgctgaagaacgtgcactcccaatcgttctcttttc |
4471050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 15 - 283
Target Start/End: Complemental strand, 4594596 - 4594328
Alignment:
| Q |
15 |
tatcaaagatgagtaactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaact |
114 |
Q |
| |
|
||||||||||| | ||||||||||| |||||||||||||| ||||| | |||| |||| ||||||| ||||| ||| ||||||| ||||| |||||||| |
|
|
| T |
4594596 |
tatcaaagatgggaaactttgcaaacagaaaaccacatgctgtgttgattccagctccacttcaaggacatataaatccattgttcaaacttgcaaaact |
4594497 |
T |
|
| Q |
115 |
acttcactttagaggctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaat |
214 |
Q |
| |
|
|||||| ||||||| ||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||| |||||||||||||| ||||||||| | |
|
|
| T |
4594496 |
tcttcaccttagaggatttcacataacctttgtcaacactgaatacaatcataaacgtttgctcaaatcaagaggtccaaatgccttagatggtttccct |
4594397 |
T |
|
| Q |
215 |
gattttacctttgagactataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaagac |
283 |
Q |
| |
|
| ||||| |||||| || |||||||||||| |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
4594396 |
ggttttagctttgaaaccataccagatggtctaacaccaatggaaggtgatggtgatgttagtcaagac |
4594328 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 23 - 456
Target Start/End: Original strand, 4265607 - 4266040
Alignment:
| Q |
23 |
atgagtaactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcact |
122 |
Q |
| |
|
|||||||| ||||||||| ||| |||||||| ||||| | |||| |||| ||||||||||||||||||||||||| || |||| ||| || |||||| |
|
|
| T |
4265607 |
atgagtaattttgcaaagccaaagccacatgctgtgttgattccagctccatttcaaggccatatcaatgcattgttcaatctaggaaagcttcttcacc |
4265706 |
T |
|
| Q |
123 |
ttagaggctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttac |
222 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||| | |||||||||||| ||| |||| |
|
|
| T |
4265707 |
ttagaggctttcacataacctttgtcaacactgaatacaatcacaaacgcttgctcaaatcaagaggtccaaattctcttgatggtttcagtgactttaa |
4265806 |
T |
|
| Q |
223 |
ctttgagactataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaagaactttcat |
322 |
Q |
| |
|
|||||||| |||||||||||| ||||| |||||||||| ||||||||| || ||||||| || | ||||| | ||||||||| | |||||| | | |
|
|
| T |
4265807 |
gtttgagaccataccagatggtctaactccaatggaaggcaatggtgatgctactcaagacatataccctcttgtgcaatcaatcatgacgaacttcctt |
4265906 |
T |
|
| Q |
323 |
cgcttttttcgtgaactttttgctaaacttcatgattctgcaacttctggtcttatacctccagttacttgctttgtttccgattgctatatgccattta |
422 |
Q |
| |
|
| ||| ||||||| || ||| ||||||| | ||||| | | |||| |||| || ||| |||||||||| ||||||||||| || ||||| |||| |
|
|
| T |
4265907 |
caaccctttgatgaacttcttactagacttcatcaatctgccaatgatggttttattccaccaattacttgcttggtttccgattgttacatgcctttta |
4266006 |
T |
|
| Q |
423 |
cagtagatgttgctgaagaacattcactcccaat |
456 |
Q |
| |
|
|| |||||| ||| ||||||||| |||||||||| |
|
|
| T |
4266007 |
caatagatgctgcggaagaacatgcactcccaat |
4266040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 47 - 394
Target Start/End: Complemental strand, 4581568 - 4581221
Alignment:
| Q |
47 |
ccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactttagaggctttcacataacctttg |
146 |
Q |
| |
|
|||||||||||||| | |||||||||| ||||||| ||||||| | |||| | | ||||||||| || |||||| |||||||||||||||||||||||| |
|
|
| T |
4581568 |
ccacatgcagtgttgattccatatccacttcaaggacatatcactccattaataacactagcaaagcttcttcaccttagaggctttcacataacctttg |
4581469 |
T |
|
| Q |
147 |
taaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacctttgagactataccagatggttt |
246 |
Q |
| |
|
| ||||| ||||||||||||||||| ||||||||||||| |||||||| || ||||||||||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
4581468 |
tcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaagcgtttgatggtttcaccgattttacctttgagactattccagatggttt |
4581369 |
T |
|
| Q |
247 |
aacttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaagaactttcatcgcttttttcgtgaactttttgct |
346 |
Q |
| |
|
|||| | || ||||| ||| ||||||||| ||||||| || ||||| ||| |||||||| |||||||| | | |||| |||||||| ||||| |
|
|
| T |
4581368 |
aactccgatagaaggcgatagtgatgttaatcaagacatatatgctctatgtgaatcaatcagaaagaacttcctacaacctttttgtgaacttcttgct |
4581269 |
T |
|
| Q |
347 |
aaacttcatgattctgcaacttctggtcttatacctccagttacttgc |
394 |
Q |
| |
|
| |||| |||| ||||| |||||||||||| | ||||||||||||||| |
|
|
| T |
4581268 |
agacttaatgactctgccacttctggtcttgtccctccagttacttgc |
4581221 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 47 - 460
Target Start/End: Original strand, 4258750 - 4259163
Alignment:
| Q |
47 |
ccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactttagaggctttcacataacctttg |
146 |
Q |
| |
|
|||||||| ||||| | ||||||||||| |||||||||||||||| ||||||| |||||||| || || |||||||||| ||| |||||||||||||||| |
|
|
| T |
4258750 |
ccacatgctgtgttgattccatatccagctcaaggccatatcaatccattgttcaaactagctaagcttcttcactttaaaggttttcacataacctttg |
4258849 |
T |
|
| Q |
147 |
taaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacctttgagactataccagatggttt |
246 |
Q |
| |
|
| ||||||||||| ||||||||||| ||||||||||||| ||| ||||||| |||||||||||| ||||||||||||||||||||| | ||||||| | |
|
|
| T |
4258850 |
tcaacactgaatataatcacaaacgtttgctcaaatcaagaggtgaaaatgccgttgatggtttcattgattttacctttgagactattcaagatggtct |
4258949 |
T |
|
| Q |
247 |
aacttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaagaactttcatcgcttttttcgtgaactttttgct |
346 |
Q |
| |
|
||| || ||||||||||||| ||||||| ||||||| ||| | | |||| || ||| || | |||||||| | || ||| |||||||| ||||| |
|
|
| T |
4258950 |
gactccagtggaaggtgatggcgatgttactcaagacgtaccctccctttctcaatctataagaaagaacttccttcagccctttggtgaacttcttgct |
4259049 |
T |
|
| Q |
347 |
aaacttcatgattctgcaacttctggtcttatacctccagttacttgctttgtttccgattgctatatgccatttacagtagatgttgctgaagaacatt |
446 |
Q |
| |
|
|||||||| || || || ||| ||||| || | || || ||||||||||| ||||| ||||| || ||| |||||| || | | ||||||||| ||| |
|
|
| T |
4259050 |
aaacttcaagactcagccactactggtattgttccacctgttacttgcttagtttctgattgttacatgtcatttagtatacaagctgctgaagagcatg |
4259149 |
T |
|
| Q |
447 |
cactcccaattgtt |
460 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
4259150 |
cactcccaattgtt |
4259163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 23 - 456
Target Start/End: Original strand, 4513529 - 4513965
Alignment:
| Q |
23 |
atgagtaactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcact |
122 |
Q |
| |
|
|||||||| | ||||| |||||||||||||| ||||| | |||||||||| ||||||||||||||||| || |||| | | ||||||||||||||||| |
|
|
| T |
4513529 |
atgagtaattctgcaagcagaaaaccacatgctgtgttgattccatatccacttcaaggccatatcaatccaatgttcagattagcaaaactacttcacc |
4513628 |
T |
|
| Q |
123 |
ttagaggctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttac |
222 |
Q |
| |
|
||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||| ||||| ||||| ||||||||||||| |||||| |
|
|
| T |
4513629 |
ttagaggctttcacataacctttgttaacaccgaatacaatcacaaacgtttgctcaaatcaagaggtcctaatgcttttgatggtttcaccgattttcg |
4513728 |
T |
|
| Q |
223 |
ctttgagactataccagatggtttaacttcaatggaagg---tgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaagaacttt |
319 |
Q |
| |
|
|||||||||||| || |||||||||||| ||||||| || || |||||||| || ||||||||| ||||| | |||||||| ||||| || |
|
|
| T |
4513729 |
ctttgagactattcctgatggtttaactccaatggatggcgatggtggtgatgctactcaagacttgatatctcttcgcgaatcaatcagaaagaa-ttg |
4513827 |
T |
|
| Q |
320 |
catcg-cttttttcgtgaactttttgctaaacttcatgattctgcaacttctggtcttatacctccagttacttgctttgtttccgattgctatatgcca |
418 |
Q |
| |
|
||||| |||||| |||||||| ||||||||| |||| ||||||| | |||||||||||| ||||||||||| ||||| ||||| ||||||| |
|
|
| T |
4513828 |
catcgaaccttttcgcgaacttttagctaaacttaatgactctgcaaaagccggtcttataccttttgttacttgcttagtttctgattgtattatgcca |
4513927 |
T |
|
| Q |
419 |
tttacagtagatgttgctgaagaacattcactcccaat |
456 |
Q |
| |
|
||||| | | ||||||||||||| | |||||||||| |
|
|
| T |
4513928 |
tttactacacaagttgctgaagaacttgcactcccaat |
4513965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 60 - 282
Target Start/End: Complemental strand, 4569611 - 4569393
Alignment:
| Q |
60 |
taactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactttagaggctttcacataacctttgtaaacactgaata |
159 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| |||| ||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||| ||| |
|
|
| T |
4569611 |
taactccatatccacttcaaggccatatcaatccattattgaaactagcaaaacttcttcaccttagaggctttcacataacctttgtcaacaccgaa-- |
4569514 |
T |
|
| Q |
160 |
caatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacctttgagactataccagatggtttaacttcaatggaa |
259 |
Q |
| |
|
||||||||| ||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||| | | ||| |
|
|
| T |
4569513 |
--atcacaaacatttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggtttaactccgacagaa |
4569416 |
T |
|
| Q |
260 |
ggtgatggtgatgttagtcaaga |
282 |
Q |
| |
|
||| |||||||| |||||||||| |
|
|
| T |
4569415 |
ggttatggtgatattagtcaaga |
4569393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 29 - 282
Target Start/End: Complemental strand, 4603682 - 4603429
Alignment:
| Q |
29 |
aactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactttagag |
128 |
Q |
| |
|
||||||||||| ||||||| |||||| ||||| | |||||||||| ||||||||||||||||| || |||||||||||||||||||| ||||| |||||| |
|
|
| T |
4603682 |
aactttgcaaacagaaaacaacatgctgtgttgattccatatccacttcaaggccatatcaatccaatgttgaaactagcaaaactatttcaccttagag |
4603583 |
T |
|
| Q |
129 |
gctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacctttga |
228 |
Q |
| |
|
| ||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||| ||||| |||||||| || || |||| |||||||| |||||| |
|
|
| T |
4603582 |
gatttcacataacctttgtcaacaccgaatacaatcacaaacgtttgctcaaatcaagaggtcctaatgccttagacggcttcactgattttagctttga |
4603483 |
T |
|
| Q |
229 |
gactataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaaga |
282 |
Q |
| |
|
|| || |||||||| |||| | ||||||||||||| | ||||||||||||| |
|
|
| T |
4603482 |
aacaatcccagatggactaacaccgatggaaggtgatgataatgttagtcaaga |
4603429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 23 - 582
Target Start/End: Complemental strand, 4462785 - 4462230
Alignment:
| Q |
23 |
atgagtaactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcact |
122 |
Q |
| |
|
|||||||| |||||||||| ||| |||||||| ||||| | ||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
4462785 |
atgagtaattttgcaaagacaaagccacatgctgtgttgattccatgtccatcccaaggccatatcaatgcattgttgaaactaggaaaactacttcacc |
4462686 |
T |
|
| Q |
123 |
ttagaggctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttac |
222 |
Q |
| |
|
||||||| ||||||||||||||||| |||||||||||||||||||| | |||||||| |||| ||||| ||| | | |||||||||| ||| |||| |
|
|
| T |
4462685 |
ttagaggttttcacataacctttgtcaacactgaatacaatcacaattgcttgctcaattcaagaggtcctaattctctagatggtttcactgactttaa |
4462586 |
T |
|
| Q |
223 |
ctttgagactataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaagaactttcat |
322 |
Q |
| |
|
||||||||| || ||| ||||||| || |||||||| |||||||||| ||||||| ||| | ||| || ||||||||| | |||||| | |
|
|
| T |
4462585 |
ctttgagaccattccaaatggttttacaacaatggaa---actggtgatgtttttcaagacgtacacttattttttcaatcaatcatgatgaacttcatt |
4462489 |
T |
|
| Q |
323 |
cgcttttttcgtgaactttttgctaaacttcatgattctgcaacttctggtcttatacctccagttacttgctttgtttccgattgctatatgccattta |
422 |
Q |
| |
|
| ||| |||||||| || | | |||| ||| ||||| ||| | | |||||| ||||| ||||||||| | ||||| ||||| || |||||||||| |
|
|
| T |
4462488 |
caaccctttagtgaacttcttacaagacttgatgcctctgccactgccgatcttatccctccggttacttgcatagtttctgattgttacatgccattta |
4462389 |
T |
|
| Q |
423 |
cagtagatgttgctgaagaacattcactcccaattgttctattttcgccatgtagtgcttgtttcttcttggctggttttcatattcctaaactgtttca |
522 |
Q |
| |
|
|||| |||| |||||| ||| | |||||||||| ||||| ||||| || ||||| |||| || | || || ||| ||||||||| ||||||| |
|
|
| T |
4462388 |
cagtggatgccgctgaacaacgtgcactcccaatcgttctcttttccccggtcagtgcatgttgctcactcactacttctcacattcctaaattgtttca |
4462289 |
T |
|
| Q |
523 |
gaatggtttactgccactcaaaggtaatatcatttataatccctttttcttccaaagaga |
582 |
Q |
| |
|
||||||| | ||||||||||||||| ||||||| | | |||||||||||||| |||||| |
|
|
| T |
4462288 |
gaatggtgtgctgccactcaaaggt-atatcatctttgttccctttttcttcctaagaga |
4462230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 32 - 282
Target Start/End: Complemental strand, 4565598 - 4565348
Alignment:
| Q |
32 |
tttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactttagaggct |
131 |
Q |
| |
|
|||||||| |||||||||||||| ||||| | |||| |||| ||||||| ||||| ||| ||||||| ||||| |||||||| |||||| ||||||| | |
|
|
| T |
4565598 |
tttgcaaacagaaaaccacatgctgtgttgattccagctccatttcaaggacatataaatccattgttcaaacttgcaaaacttcttcaccttagaggat |
4565499 |
T |
|
| Q |
132 |
ttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacctttgagac |
231 |
Q |
| |
|
|||| ||||||||||| ||||||||||||||||| ||||| ||||| ||||||| |||||||||||||| ||||||| | || |||| |||||| || |
|
|
| T |
4565498 |
ttcatataacctttgtcaacactgaatacaatcataaacgattgctaaaatcaagaggtccaaatgccttagatggttcccgtggtttttgctttgaaac |
4565399 |
T |
|
| Q |
232 |
tataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaaga |
282 |
Q |
| |
|
|||||||||||| |||| | || |||||||||||||||||||||||||| |
|
|
| T |
4565398 |
cataccagatggtctaacaccgatagaaggtgatggtgatgttagtcaaga |
4565348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 149 - 494
Target Start/End: Original strand, 4298174 - 4298519
Alignment:
| Q |
149 |
aacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacctttgagactataccagatggtttaa |
248 |
Q |
| |
|
||||| |||||||||||||||| ||||| |||||| ||||||||| || ||||||||||||| | |||| |||||||||||| ||||||||| | | |
|
|
| T |
4298174 |
aacaccgaatacaatcacaaacacctgctcgaatcaaggggtccaaaagcttttgatggtttcaccaactttagctttgagactattccagatggtctga |
4298273 |
T |
|
| Q |
249 |
cttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaagaactttcatcgcttttttcgtgaactttttgctaa |
348 |
Q |
| |
|
|| ||| |||||||||||| ||||||| ||||||| ||| |||||| | |||||||| |||||||| | || ||| |||||||| ||||||| |
|
|
| T |
4298274 |
ctccaacggaaggtgatggagatgttactcaagacataccatctctttcccaatcaatcagaaagaacttccttcagccctttggtgaacttcttgctaa |
4298373 |
T |
|
| Q |
349 |
acttcatgattctgcaacttctggtcttatacctccagttacttgctttgtttccgattgctatatgccatttacagtagatgttgctgaagaacattca |
448 |
Q |
| |
|
||||| ||||||||| ||| |||||||| |||| |||||||||||||| ||| | |||| | ||| ||||||| || | | ||| ||||||||| || |
|
|
| T |
4298374 |
acttcgtgattctgccactgctggtcttgtaccaccagttacttgcttagttgctgattttttaatgtcatttaccatacaagctgcggaagaacatgca |
4298473 |
T |
|
| Q |
449 |
ctcccaattgttctattttcgccatgtagtgcttgtttcttcttgg |
494 |
Q |
| |
|
||||||||| |||| |||| ||| |||||| |||| |||||||| |
|
|
| T |
4298474 |
ctcccaattattctcttttgtccagctagtgcatgttccttcttgg |
4298519 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 43 - 275
Target Start/End: Complemental strand, 4599721 - 4599489
Alignment:
| Q |
43 |
aaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactttagaggctttcacataacc |
142 |
Q |
| |
|
||||| ||||||||| || | ||||| ||| ||||||| |||||||| ||| | ||||||||||| | |||||| ||||||| ||| |||||||| |
|
|
| T |
4599721 |
aaaactacatgcagtattgattccattaccaattcaaggaaatatcaatctattaatcaaactagcaaagattcttcaccttagaggattttacataacc |
4599622 |
T |
|
| Q |
143 |
tttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacctttgagactataccagatg |
242 |
Q |
| |
|
|| || ||||| || |||||||||||||| ||||||||||||| ||||| ||| | | ||||||||| ||||||| |||| |||||||| ||||||| |
|
|
| T |
4599621 |
ttcgtgaacaccgagtacaatcacaaacgcttgctcaaatcaagaggtcctaattctcgtaatggtttcactgatttttccttcgagactattccagatg |
4599522 |
T |
|
| Q |
243 |
gtttaacttcaatggaaggtgatggtgatgtta |
275 |
Q |
| |
|
|||||||| |||| || |||||||||||||||| |
|
|
| T |
4599521 |
gtttaactccaatagatggtgatggtgatgtta |
4599489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 13 - 127
Target Start/End: Original strand, 4497785 - 4497899
Alignment:
| Q |
13 |
aatatcaaagatgagtaactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaa |
112 |
Q |
| |
|
||||||||||||||||||||||| | ||| ||| |||||||||||||||||||||| |||| || |||||||||||||| ||||||||||||||| |||| |
|
|
| T |
4497785 |
aatatcaaagatgagtaactttgaagagaaaaagccacatgcagtgttaactccatttccaatttaaggccatatcaatccattgttgaaactaggaaaa |
4497884 |
T |
|
| Q |
113 |
ctacttcactttaga |
127 |
Q |
| |
|
|||||||| ||||| |
|
|
| T |
4497885 |
ttacttcaccttaga |
4497899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 4255395 - 4255545
Alignment:
| Q |
47 |
ccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactttagaggctttcacataacctttg |
146 |
Q |
| |
|
|||||||| ||||| | |||||||||||||||||||||||||||| ||| || |||||||||||| ||||||| ||| ||| ||||| |
|
|
| T |
4255395 |
ccacatgctgtgttgattccatatccagttcaaggccatatcaatctattattcaaactagcaaaattacttcatcttaaagg------------ctttg |
4255482 |
T |
|
| Q |
147 |
taaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtt |
209 |
Q |
| |
|
| ||||| ||||||||||||||||| |||||| |||||| |||||||| ||||||||||||| |
|
|
| T |
4255483 |
tcaacaccgaatacaatcacaaacgcttgctcgaatcaagaggtccaaaagcctttgatggtt |
4255545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 4472684 - 4472612
Alignment:
| Q |
23 |
atgagtaactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcat |
95 |
Q |
| |
|
|||||||| ||||||| || |||||||||||||||||| | ||||| |||| ||||||||||||||||||| |
|
|
| T |
4472684 |
atgagtaattttgcaatgacaaaaccacatgcagtgttgattccatgtccaccccaaggccatatcaatgcat |
4472612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 4493465 - 4493401
Alignment:
| Q |
41 |
agaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaact |
105 |
Q |
| |
|
|||||||||||||||||||| | ||||| ||||| |||||| |||||||||||| || ||||||| |
|
|
| T |
4493465 |
agaaaaccacatgcagtgttgattccatttccagctcaaggtcatatcaatgcaatgctgaaact |
4493401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 506 - 548
Target Start/End: Complemental strand, 4471012 - 4470970
Alignment:
| Q |
506 |
attcctaaactgtttcagaatggtttactgccactcaaaggta |
548 |
Q |
| |
|
||||||||| |||||||||||||| | |||||||||||||||| |
|
|
| T |
4471012 |
attcctaaattgtttcagaatggtgtgctgccactcaaaggta |
4470970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 385 - 462
Target Start/End: Original strand, 4255551 - 4255628
Alignment:
| Q |
385 |
agttacttgctttgtttccgattgctatatgccatttacagtagatgttgctgaagaacattcactcccaattgttct |
462 |
Q |
| |
|
|||||||||||| ||||| ||||| || ||| ||||||| || | | ||||||||| ||| |||||||||||||||| |
|
|
| T |
4255551 |
agttacttgcttagtttctgattgttacatgtcatttaccatacaagctgctgaagagcatgcactcccaattgttct |
4255628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 164; Significance: 3e-87; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 15 - 493
Target Start/End: Original strand, 1993 - 2474
Alignment:
| Q |
15 |
tatcaaagatgagtaactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaact |
114 |
Q |
| |
|
||||||| ||| | ||||||||||| ||||||||||||| ||| | | |||||||||||||||||||||||||||| ||||||| ||||||||||| || |
|
|
| T |
1993 |
tatcaaaaatgggaaactttgcaaacagaaaaccacatgttgtgatgattccatatccagttcaaggccatatcaatccattgttcaaactagcaaagct |
2092 |
T |
|
| Q |
115 |
acttcactttagaggctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaat |
214 |
Q |
| |
|
|||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||| ||||| ||||| ||||||||||| | |
|
|
| T |
2093 |
tcttcaccttagaggctttcacataacctttgtcaacactgaatacaatcataaacgcttgctcaaatcaagaggtcctaatgctcttgatggtttcgct |
2192 |
T |
|
| Q |
215 |
gattttacctttgagactataccagatggtttaacttcaatggaa---ggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatca |
311 |
Q |
| |
|
|||||| ||| |||||||| || |||||||||||| || ||||| | ||||||| |||||||||||||| ||| | |||||||| |||||||| | |
|
|
| T |
2193 |
gatttttgcttcgagactattcccgatggtttaactccagtggaagatgatgatggtaatgttagtcaagacatactctctctttgtaaatcaatcagaa |
2292 |
T |
|
| Q |
312 |
agaactttcatcgcttttttcgtgaactttttgctaaacttcatgattctgcaacttctggtcttatacctccagttacttgctttgtttccgattgcta |
411 |
Q |
| |
|
| ||||| | || ||| ||||| |||||| |||||| |||| | || ||||| | |||||||||||| |||||||| ||| |||| ||||| ||||| || |
|
|
| T |
2293 |
aaaacttccttcacttctttcgcgaacttcttgctagacttgacgagtctgccaattctggtcttatccctccagtaactagcttagtttctgattgtta |
2392 |
T |
|
| Q |
412 |
tatgccatttacagtagatgttgctgaagaacattcactcccaattgttctattttcgccatgtagtgcttgtttcttcttg |
493 |
Q |
| |
|
||| ||||||| || | | |||||||||| || |||||||||| |||| | ||||||| ||||||| || | ||||||| |
|
|
| T |
2393 |
catgtcatttaccatacaagctgctgaagaatatgcactcccaatccttctttattcgccaggtagtgcatgctccttcttg |
2474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 150; Significance: 6e-79; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 21 - 421
Target Start/End: Complemental strand, 2404 - 2001
Alignment:
| Q |
21 |
agatgagtaactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttca |
120 |
Q |
| |
|
||||||||| |||||||| | |||||||||||| ||||| | |||||||||||||||||||||||||||| |||| || ||||||||||| || ||||| |
|
|
| T |
2404 |
agatgagtagttttgcaaacaaaaaaccacatgctgtgttgattccatatccagttcaaggccatatcaatccattattcaaactagcaaagcttcttca |
2305 |
T |
|
| Q |
121 |
ctttagaggctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgatttt |
220 |
Q |
| |
|
| ||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||| ||||| ||||| ||||||||||| ||||||| |
|
|
| T |
2304 |
ccttagaggctttcacataacctttgtcaacactgaatacaatcataaacgcttgctcaaatcaagaggtcctaatgctcttgatggtttcgctgatttt |
2205 |
T |
|
| Q |
221 |
acctttgagactataccagatggtttaacttcaatggaa---ggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaagaact |
317 |
Q |
| |
|
||| |||||||| || |||||||||||| || ||||| | ||||||| |||||||||||||| ||| | |||||||| |||||||| || |||| |
|
|
| T |
2204 |
tgcttcgagactattcccgatggtttaactccagtggaagatgatgatggtaatgttagtcaagacatactctctctttgtaaatcaatcagaaaaaact |
2105 |
T |
|
| Q |
318 |
ttcatcgcttttttcgtgaactttttgctaaacttcatgattctgcaacttctggtcttatacctccagttacttgctttgtttccgattgctatatgcc |
417 |
Q |
| |
|
| | || ||| ||||| |||||| |||||| |||| | || ||||| | |||||||||||| |||||||| ||| |||| ||||| ||||| || ||| | |
|
|
| T |
2104 |
tccttcacttctttcgcgaacttcttgctagacttgacgagtctgccaattctggtcttatccctccagtaactagcttagtttctgattgttacatgtc |
2005 |
T |
|
| Q |
418 |
attt |
421 |
Q |
| |
|
|||| |
|
|
| T |
2004 |
attt |
2001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 148; Significance: 1e-77; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 29 - 280
Target Start/End: Complemental strand, 1283005 - 1282754
Alignment:
| Q |
29 |
aactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactttagag |
128 |
Q |
| |
|
||||||||||| | |||||||||||| ||||| | ||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||| |||||| |
|
|
| T |
1283005 |
aactttgcaaacacaaaaccacatgctgtgttgattccatatccagctcaaggccatatcaatccattgttcaaactagcaaaactacttcaccttagag |
1282906 |
T |
|
| Q |
129 |
gctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacctttga |
228 |
Q |
| |
|
||||| ||||||||||||| || |||||||||||||||||||| ||||||||||||| |||||||||||| | |||||||||| |||||||| |||||| |
|
|
| T |
1282905 |
gcttttacataacctttgttaatactgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgccctagatggtttcactgattttagctttga |
1282806 |
T |
|
| Q |
229 |
gactataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaa |
280 |
Q |
| |
|
|| || ||||||||| |||| ||| | |||||||||||||||||||||||| |
|
|
| T |
1282805 |
aaccatcccagatggtctaacatcactagaaggtgatggtgatgttagtcaa |
1282754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 135; Significance: 6e-70; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 21 - 462
Target Start/End: Original strand, 20862358 - 20862793
Alignment:
| Q |
21 |
agatgagtaactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttca |
120 |
Q |
| |
|
|||||||||| ||||| ||| ||||||||||||||||||||||||||||||| ||||||| ||||||||| || |||| |||||||||||||||||||| |
|
|
| T |
20862358 |
agatgagtaattttgctgagaaaaaaccacatgcagtgttaactccatatccacttcaaggtcatatcaatccaatgttaaaactagcaaaactacttca |
20862457 |
T |
|
| Q |
121 |
ctttagaggctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgatttt |
220 |
Q |
| |
|
| ||||||||||| ||||||| ||||| || |||||||||||||||||||| ||||| || |||| |||||||| ||||||||||||||| ||| ||| |
|
|
| T |
20862458 |
ccttagaggcttttacataacatttgtcaatactgaatacaatcacaaacgcttgcttaagtcaatgggtccaataccctttgatggtttcactgacttt |
20862557 |
T |
|
| Q |
221 |
acctttgagactataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaagaactttc |
320 |
Q |
| |
|
||||||||| | |||||||||| ||||||| | ||||| |||||||||||||||||| | ||||| || || ||||| | |||| ||| |
|
|
| T |
20862558 |
cgctttgagaccgttccagatggttcaacttca---catggtga---tgatgttagtcaagacttccaatctcttcgtgaattaatcagaacgaac-ttc |
20862650 |
T |
|
| Q |
321 |
atcg-cttttttcgtgaactttttgctaaacttcatgattctgcaacttctggtcttatacctccagttacttgctttgtttccgattgctatatgccat |
419 |
Q |
| |
|
|||| | ||||||||||||| |||| ||||||||||| ||| | | ||||||||||||||||| ||||||||||| ||||| ||| | | ||| || |
|
|
| T |
20862651 |
atcgacagttttcgtgaacttcttgccaaacttcatgactcttccaaatctggtcttatacctcctgttacttgcttagtttctgatagtttcatgtcag |
20862750 |
T |
|
| Q |
420 |
ttacagtagatgttgctgaagaacattcactcccaattgttct |
462 |
Q |
| |
|
|||| || | ||||||||||||| | |||||||||||||||| |
|
|
| T |
20862751 |
ttaccatacaagttgctgaagaacttgcactcccaattgttct |
20862793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 15 - 280
Target Start/End: Complemental strand, 1676107 - 1675842
Alignment:
| Q |
15 |
tatcaaagatgagtaactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaact |
114 |
Q |
| |
|
||||||| ||| | ||||||||||| |||||| ||||||| ||||| | ||||||||||| |||||||||||||||| ||||||| |||||||||||||| |
|
|
| T |
1676107 |
tatcaaaaatgggaaactttgcaaacagaaaatcacatgctgtgttcattccatatccagctcaaggccatatcaatccattgttcaaactagcaaaact |
1676008 |
T |
|
| Q |
115 |
acttcactttagaggctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaat |
214 |
Q |
| |
|
||||| ||||||||| ||| |||||| ||| ||||||||||||||||||||||| ||||||||||||| ||||||| |||||| |||||||||| | |
|
|
| T |
1676007 |
tattcaccttagaggctctcatgtaacctatgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtccaactgccttggatggtttcact |
1675908 |
T |
|
| Q |
215 |
gattttacctttgagactataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaa |
280 |
Q |
| |
|
||||||| |||||| || || ||||||||| |||| || | |||||||||||||||||||||||| |
|
|
| T |
1675907 |
gattttagctttgaaaccatcccagatggtctaacaccactagaaggtgatggtgatgttagtcaa |
1675842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 215 - 318
Target Start/End: Original strand, 16685029 - 16685132
Alignment:
| Q |
215 |
gattttacctttgagactataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaaga |
314 |
Q |
| |
|
||||||| |||||||||||| ||| |||||||| || ||| ||| |||||||| ||||||||||||||| ||| |||||||||| |||||||| |||| |
|
|
| T |
16685029 |
gattttagctttgagactattccatatggtttacctccaacggatggtgatggcgatgttagtcaagacatacacgctctttgtaaatcaatcagaaaga |
16685128 |
T |
|
| Q |
315 |
actt |
318 |
Q |
| |
|
|||| |
|
|
| T |
16685129 |
actt |
16685132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0199 (Bit Score: 130; Significance: 6e-67; HSPs: 1)
Name: scaffold0199
Description:
Target: scaffold0199; HSP #1
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 15 - 280
Target Start/End: Complemental strand, 1344 - 1079
Alignment:
| Q |
15 |
tatcaaagatgagtaactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaact |
114 |
Q |
| |
|
||||||| ||| | ||||||||||| |||||| ||||||| ||||| | ||||||||||| |||||||||||||||| ||||||| |||||||||||||| |
|
|
| T |
1344 |
tatcaaaaatgggaaactttgcaaacagaaaatcacatgctgtgttcattccatatccagctcaaggccatatcaatccattgttcaaactagcaaaact |
1245 |
T |
|
| Q |
115 |
acttcactttagaggctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaat |
214 |
Q |
| |
|
||||| ||||||||| ||| |||||| ||| ||||||||||||||||||||||| ||||||||||||| ||||||| |||||| |||||||||| | |
|
|
| T |
1244 |
tattcaccttagaggctctcatgtaacctatgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtccaactgccttggatggtttcact |
1145 |
T |
|
| Q |
215 |
gattttacctttgagactataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaa |
280 |
Q |
| |
|
||||||| |||||| || || ||||||||| |||| || | |||||||||||||||||||||||| |
|
|
| T |
1144 |
gattttagctttgaaaccatcccagatggtctaacaccactagaaggtgatggtgatgttagtcaa |
1079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 114; Significance: 2e-57; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 16 - 285
Target Start/End: Complemental strand, 3088330 - 3088061
Alignment:
| Q |
16 |
atcaaagatgagtaactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaacta |
115 |
Q |
| |
|
||||||||||||| |||||| | | ||| |||||||| ||||| | |||||||||| ||||||| ||||| ||| ||||||| |||||||||||||| |
|
|
| T |
3088330 |
atcaaagatgagttactttgttgataaaaagccacatgctgtgttgattccatatccacttcaaggtcatataaatccattgttaaaactagcaaaactt |
3088231 |
T |
|
| Q |
116 |
cttcactttagaggctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatg |
215 |
Q |
| |
|
|||||| ||| ||||||||||||||||||||| || || |||||||||||||| || ||||| ||||||| ||| | ||| | |||||||||||| || |
|
|
| T |
3088230 |
cttcaccttaaaggctttcacataacctttgtcaataccgaatacaatcacaaccgtttgcttaaatcaagaggttctaattctcttgatggtttcactg |
3088131 |
T |
|
| Q |
216 |
attttacctttgagactataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaagactt |
285 |
Q |
| |
|
||||| |||||||||||| | ||||||| ||||| ||||||||||| |||||||||||||||||||||| |
|
|
| T |
3088130 |
attttgtctttgagactatccaagatggtctaactccaatggaaggtaatggtgatgttagtcaagactt |
3088061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 111; Significance: 1e-55; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 23 - 474
Target Start/End: Complemental strand, 24104673 - 24104218
Alignment:
| Q |
23 |
atgagtaactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcact |
122 |
Q |
| |
|
|||||||| |||| |||| ||| || ||||| ||||| | |||| |||| ||||||| ||||||||||||||||| ||||||| ||| || |||||| |
|
|
| T |
24104673 |
atgagtaattttgtaaagccaaagccgcatgctgtgttgattccagctccatttcaaggtcatatcaatgcattgttcaaactaggaaagcttcttcacc |
24104574 |
T |
|
| Q |
123 |
ttagaggctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttac |
222 |
Q |
| |
|
|||||||||||||||||||||| || ||||| ||||||||||||||||| |||||| |||||| | ||| ||| | |||||||||||||||| |||| |
|
|
| T |
24104573 |
ttagaggctttcacataaccttcgtgaacaccgaatacaatcacaaacgcttgctcgaatcaagagatcctaattctcttgatggtttcaatgactttaa |
24104474 |
T |
|
| Q |
223 |
ctttgagactataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaagaactttcat |
322 |
Q |
| |
|
||||||||| |||||||||||| ||||| |||||||||| |||||||||||| ||||||| || | ||||| | ||||||||| | |||||| | | |
|
|
| T |
24104473 |
ctttgagaccataccagatggtctaactccaatggaaggcaatggtgatgttactcaagacatataccctcttgtgcaatcaatcatgacgaacttcctt |
24104374 |
T |
|
| Q |
323 |
cgcttttttcgtgaactttttgctaaacttcatgattctgcaacttctggtcttatacctccagttacttgctttgtttccgattgctatatgccattta |
422 |
Q |
| |
|
| ||| ||||||| || ||| ||||||| | ||||| | | |||| |||| || ||| |||||||||| ||||| ||||| || |||||||||| |
|
|
| T |
24104373 |
cagccctttgatgaacttcttactagacttcatcaatctgccaatgatggtgttattccaccaattacttgcttagtttcggattgttacatgccattta |
24104274 |
T |
|
| Q |
423 |
cag----tagatgttgctgaagaacattcactcccaattgttctattttcgccatg |
474 |
Q |
| |
|
||| | |||| || |||||||||| ||||||||||| || | ||||| ||||| |
|
|
| T |
24104273 |
cagttgatcgatgctgttgaagaacatgcactcccaattcttttcttttctccatg |
24104218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 334 - 468
Target Start/End: Original strand, 3383 - 3517
Alignment:
| Q |
334 |
tgaactttttgctaaacttcatgattctgcaacttctggtcttatacctccagttacttgctttgtttccgattgctatatgccatttacagtagatgtt |
433 |
Q |
| |
|
||||||| ||| |||||||||||| ||||| ||| |||||||| | || | |||||||||| | || | ||||| || ||||||||||| || | | | |
|
|
| T |
3383 |
tgaacttcttgttaaacttcatgactctgccactgctggtcttgttccacaagttacttgcatagtcgctgattgttacatgccatttaccatacaagct |
3482 |
T |
|
| Q |
434 |
gctgaagaacattcactcccaattgttctattttc |
468 |
Q |
| |
|
|||||||||||| |||||||||||||||| ||||| |
|
|
| T |
3483 |
gctgaagaacatgcactcccaattgttctcttttc |
3517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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