View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15513_low_16 (Length: 329)
Name: NF15513_low_16
Description: NF15513
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15513_low_16 |
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Alignment Details
Target: chr5 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 1 - 314
Target Start/End: Original strand, 32462190 - 32462503
Alignment:
| Q |
1 |
aaatgttatggtccaacagtagacaatggttatagtttctgtctctcctatagtaataaattttcccatttaaaaacggcggcattcaaaatttaatttc |
100 |
Q |
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|||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32462190 |
aaatgttatggtccaacattagacaatggttatagtttctgtctctcatatagtaataaattttcccatttaaaaacggcggcattcaaaatttaatttc |
32462289 |
T |
|
| Q |
101 |
gtaccaaaaatacattgtatcaacataatttataatcagcaccgcaccagtaacatttagcacatgagtatgaaataacatagacatatacagttggtag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
32462290 |
gtaccaaaaatacattgtatcaacataatttataatcagcaccgcaccagtaacatttagcatatgagtatgaaataacatagacatatacagttggtag |
32462389 |
T |
|
| Q |
201 |
tagcttttaattgtaataaacactgataatagcttttcatacatgttcttgttatcatagctgttctgagtttagactaaatttggctcaggggaaaccc |
300 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32462390 |
tagcttttaattgtaataaacactgataatagcttttcatacatgttcttgttatcatagctgttctgagtttagactaaatttggctcaggggaaaccc |
32462489 |
T |
|
| Q |
301 |
tactcttacatctt |
314 |
Q |
| |
|
|||||||||||||| |
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| T |
32462490 |
tactcttacatctt |
32462503 |
T |
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