View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15513_low_19 (Length: 292)
Name: NF15513_low_19
Description: NF15513
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15513_low_19 |
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Alignment Details
Target: chr5 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 26 - 276
Target Start/End: Complemental strand, 42026278 - 42026028
Alignment:
| Q |
26 |
tattaatcaacaatatttgatatttattattttaataatgaaaaatagttacattatactcaatgatcccatcaccagttgtagcattaagaaaatgagc |
125 |
Q |
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| T |
42026278 |
tattaatcaacaatatttgatatttattattttaataatgaaaaacagttacattatactcaacgatcccatcaccagttgtagcattaagaaaatgagc |
42026179 |
T |
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| Q |
126 |
cctaatctgagcaaaaccagtggccatcctaaacattcctcttcctccgaccaccgcgagttccctcgtcggttccctcaccggattcctcgaaagaaca |
225 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42026178 |
cctaatctgagcaaaaccagtggccatcctaaactttcctcttcctccgaccaccgcgagttccctcgtcggttccctcaccggattcctcgaaagaaca |
42026079 |
T |
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| Q |
226 |
ctaaaggagcttccatttaattcaccagaggtgaaagcataatcaacatac |
276 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42026078 |
ctaaaggagcttccatttaattcaccagaggtgaaagcataatcaacatac |
42026028 |
T |
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