View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15514_low_35 (Length: 238)
Name: NF15514_low_35
Description: NF15514
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15514_low_35 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 18 - 238
Target Start/End: Complemental strand, 37672293 - 37672070
Alignment:
| Q |
18 |
attctaatttatagtaaataattagatcttgtatcttgattcttaccttccaggaaatacaccctttggta---tgtagtatttgacttttcatacaatc |
114 |
Q |
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| T |
37672293 |
attctaatttatagtaaataattagatcttgtatcttgattcttaccttccaggaaatacaccctttggtacaatgtagtatttgacttttcatacaatc |
37672194 |
T |
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| Q |
115 |
aatgcttttgaatttgtggcatgaaataatagtcgtcacttgtcatcctccacctttgactgtgcgacaacatttattttttgttcttgtattgtttgac |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
37672193 |
aatgcttttgaatttgtggcatgaaataatagtcgtcacttgtcatcctccacctttgactgtgcgacgacatttattttttgttcttgtattgtttgac |
37672094 |
T |
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| Q |
215 |
tagtcatatacacttgtgtatgaa |
238 |
Q |
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|||||||||||||||||||||||| |
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| T |
37672093 |
tagtcatatacacttgtgtatgaa |
37672070 |
T |
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