View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15515_high_10 (Length: 234)
Name: NF15515_high_10
Description: NF15515
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15515_high_10 |
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Alignment Details
Target: chr3 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 51687737 - 51687959
Alignment:
| Q |
1 |
tatgaaatccattgtttatagtccaaattagcaatgtcgtaacattaatgcgacatgtcataaagataagtcttaaattgagttgtggaaaaaatcctga |
100 |
Q |
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| T |
51687737 |
tatgaaatccattgtttatagtccaaattagcaatgtcgtaacattaatgcgacatgtcataaagataagtcttaaattgagttgtggaaaaaatcctga |
51687836 |
T |
|
| Q |
101 |
aacttataaaacaaggggagtaaa--ataaaatctcagaggagtgtgatagtgaaaattttgtgcaagttatgctcaaattagtttatagtgttaggggt |
198 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51687837 |
aacttataaaacaaggggagtaaaatataaaatctcagaggagtgtgatagtgaaaattttgtgcaagttatgctcaaattagtttatagtgttaggggt |
51687936 |
T |
|
| Q |
199 |
tctattacccgaatggttgtttt |
221 |
Q |
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| T |
51687937 |
tctattacccgaatggttgtttt |
51687959 |
T |
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