View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15515_high_4 (Length: 349)

Name: NF15515_high_4
Description: NF15515
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15515_high_4
NF15515_high_4
[»] chr2 (19 HSPs)
chr2 (26-157)||(4578458-4578589)
chr2 (151-218)||(39355141-39355208)
chr2 (144-218)||(18297162-18297236)
chr2 (151-216)||(7487147-7487212)
chr2 (151-218)||(1292072-1292139)
chr2 (144-218)||(25193967-25194041)
chr2 (155-218)||(8149937-8150000)
chr2 (155-218)||(8154561-8154624)
chr2 (151-218)||(15016459-15016526)
chr2 (151-218)||(34464817-34464884)
chr2 (173-215)||(18762946-18762988)
chr2 (181-216)||(4578590-4578625)
chr2 (175-218)||(2264630-2264673)
chr2 (183-218)||(9143691-9143726)
chr2 (183-218)||(14550465-14550500)
chr2 (150-192)||(42364492-42364534)
chr2 (141-194)||(30777286-30777339)
chr2 (151-192)||(41345088-41345129)
chr2 (150-194)||(31783793-31783837)
[»] chr8 (25 HSPs)
chr8 (145-218)||(39657703-39657776)
chr8 (139-218)||(4835507-4835586)
chr8 (145-218)||(2751211-2751284)
chr8 (148-218)||(1209762-1209832)
chr8 (151-217)||(34633214-34633280)
chr8 (151-216)||(1149916-1149981)
chr8 (170-218)||(4840983-4841031)
chr8 (170-218)||(41099288-41099336)
chr8 (151-218)||(10237460-10237527)
chr8 (151-214)||(15227140-15227203)
chr8 (151-214)||(30414024-30414087)
chr8 (145-215)||(7059144-7059214)
chr8 (151-216)||(41451213-41451278)
chr8 (151-217)||(19784378-19784444)
chr8 (183-218)||(7857786-7857821)
chr8 (180-218)||(43690746-43690784)
chr8 (145-198)||(15259850-15259903)
chr8 (150-194)||(15808885-15808929)
chr8 (151-193)||(35301630-35301672)
chr8 (151-196)||(9853254-9853299)
chr8 (151-196)||(23397441-23397486)
chr8 (149-193)||(10585859-10585903)
chr8 (150-194)||(17792892-17792936)
chr8 (150-194)||(23347721-23347765)
chr8 (150-194)||(35448610-35448654)
[»] chr7 (22 HSPs)
chr7 (145-216)||(48692028-48692099)
chr7 (151-218)||(46358626-46358693)
chr7 (151-218)||(47340253-47340320)
chr7 (151-217)||(41911005-41911071)
chr7 (144-218)||(46572568-46572642)
chr7 (151-218)||(763803-763870)
chr7 (151-218)||(16933136-16933203)
chr7 (151-218)||(16938519-16938586)
chr7 (151-218)||(30884115-30884182)
chr7 (151-218)||(31660175-31660242)
chr7 (151-214)||(35737058-35737121)
chr7 (150-218)||(15973860-15973928)
chr7 (145-217)||(32685839-32685911)
chr7 (151-199)||(34228606-34228654)
chr7 (144-216)||(48306331-48306399)
chr7 (144-193)||(11732036-11732085)
chr7 (151-192)||(48830601-48830642)
chr7 (150-194)||(5728880-5728924)
chr7 (150-194)||(26945714-26945758)
chr7 (150-194)||(38837729-38837773)
chr7 (150-194)||(44426598-44426642)
chr7 (150-194)||(45478514-45478558)
[»] chr4 (35 HSPs)
chr4 (143-218)||(45256871-45256946)
chr4 (144-218)||(638970-639044)
chr4 (151-218)||(11786080-11786147)
chr4 (151-218)||(11798247-11798314)
chr4 (151-218)||(13635618-13635685)
chr4 (151-218)||(30597805-30597872)
chr4 (151-218)||(49425950-49426017)
chr4 (151-218)||(15051029-15051096)
chr4 (152-215)||(49492406-49492469)
chr4 (151-218)||(50644646-50644713)
chr4 (145-218)||(10473624-10473697)
chr4 (150-218)||(26577261-26577329)
chr4 (170-218)||(35291460-35291508)
chr4 (170-218)||(51921177-51921225)
chr4 (151-218)||(27865630-27865697)
chr4 (151-218)||(53441426-53441493)
chr4 (150-218)||(51836327-51836395)
chr4 (151-218)||(46672544-46672611)
chr4 (180-218)||(1621982-1622020)
chr4 (172-218)||(36011949-36011995)
chr4 (145-196)||(22180201-22180252)
chr4 (170-209)||(55765596-55765635)
chr4 (151-196)||(30358835-30358880)
chr4 (150-194)||(25715727-25715771)
chr4 (150-194)||(54895404-54895448)
chr4 (150-193)||(36309618-36309661)
chr4 (183-218)||(38245894-38245929)
chr4 (141-194)||(36924232-36924285)
chr4 (150-194)||(8165762-8165806)
chr4 (150-194)||(17109918-17109962)
chr4 (150-194)||(21995670-21995714)
chr4 (150-194)||(30779343-30779387)
chr4 (150-194)||(37059711-37059755)
chr4 (150-194)||(47567896-47567940)
chr4 (150-194)||(53865243-53865287)
[»] chr3 (26 HSPs)
chr3 (145-218)||(50755168-50755241)
chr3 (151-218)||(9595873-9595940)
chr3 (151-218)||(30947804-30947871)
chr3 (151-217)||(6097577-6097643)
chr3 (145-218)||(19384376-19384449)
chr3 (151-216)||(54379270-54379335)
chr3 (151-214)||(3475300-3475363)
chr3 (151-218)||(9106373-9106440)
chr3 (151-214)||(19284781-19284844)
chr3 (151-218)||(26662431-26662498)
chr3 (153-218)||(2941821-2941886)
chr3 (145-218)||(51361518-51361591)
chr3 (151-214)||(10986462-10986525)
chr3 (151-218)||(26960732-26960799)
chr3 (173-216)||(31853164-31853207)
chr3 (151-217)||(33413905-33413972)
chr3 (151-218)||(46237651-46237718)
chr3 (171-218)||(47335138-47335185)
chr3 (144-198)||(8719133-8719187)
chr3 (144-198)||(9071020-9071074)
chr3 (151-193)||(34562400-34562442)
chr3 (145-194)||(16276664-16276713)
chr3 (150-194)||(8036800-8036844)
chr3 (150-194)||(36185905-36185949)
chr3 (150-194)||(50416480-50416524)
chr3 (150-194)||(50416564-50416608)
[»] chr1 (26 HSPs)
chr1 (150-218)||(23174402-23174470)
chr1 (151-218)||(23817416-23817483)
chr1 (151-218)||(24636032-24636099)
chr1 (151-218)||(48762224-48762291)
chr1 (151-218)||(49936830-49936897)
chr1 (151-218)||(16976061-16976128)
chr1 (151-218)||(43452648-43452715)
chr1 (152-218)||(18618941-18619006)
chr1 (145-218)||(4097105-4097177)
chr1 (145-218)||(11422546-11422619)
chr1 (151-216)||(19897653-19897718)
chr1 (145-218)||(23920966-23921039)
chr1 (144-216)||(21641588-21641660)
chr1 (151-218)||(20434615-20434682)
chr1 (151-218)||(25888922-25888988)
chr1 (171-218)||(50351909-50351956)
chr1 (151-214)||(6314226-6314289)
chr1 (145-215)||(180832-180902)
chr1 (174-216)||(34370495-34370537)
chr1 (171-216)||(8401423-8401468)
chr1 (145-196)||(18057807-18057858)
chr1 (145-192)||(45890595-45890642)
chr1 (151-196)||(21255841-21255886)
chr1 (150-194)||(9628599-9628643)
chr1 (150-194)||(33156992-33157036)
chr1 (150-194)||(42134133-42134177)
[»] scaffold0074 (1 HSPs)
scaffold0074 (151-218)||(24380-24447)
[»] chr6 (16 HSPs)
chr6 (151-218)||(1449648-1449715)
chr6 (151-218)||(6900909-6900976)
chr6 (151-218)||(15493280-15493347)
chr6 (151-218)||(7089188-7089255)
chr6 (144-218)||(878366-878440)
chr6 (151-216)||(34869956-34870021)
chr6 (169-218)||(35121495-35121543)
chr6 (169-209)||(33345355-33345395)
chr6 (151-218)||(31216768-31216835)
chr6 (176-218)||(1536814-1536856)
chr6 (150-194)||(22857677-22857721)
chr6 (151-192)||(7765406-7765447)
chr6 (152-193)||(15034992-15035033)
chr6 (189-218)||(24736574-24736603)
chr6 (189-218)||(24736610-24736639)
chr6 (151-196)||(30909437-30909482)
[»] chr5 (17 HSPs)
chr5 (151-218)||(14394574-14394641)
chr5 (151-218)||(14940249-14940316)
chr5 (151-218)||(26637730-26637797)
chr5 (151-218)||(37456786-37456853)
chr5 (151-216)||(3883928-3883993)
chr5 (151-215)||(15416773-15416837)
chr5 (151-218)||(30783564-30783630)
chr5 (145-215)||(28069242-28069312)
chr5 (151-216)||(13553091-13553156)
chr5 (143-214)||(34330166-34330232)
chr5 (150-196)||(13363792-13363838)
chr5 (150-192)||(39086517-39086559)
chr5 (150-192)||(39166342-39166384)
chr5 (149-194)||(11660982-11661027)
chr5 (150-194)||(22695540-22695584)
chr5 (151-187)||(23948588-23948624)
chr5 (150-194)||(39861780-39861824)
[»] scaffold0045 (1 HSPs)
scaffold0045 (144-218)||(33790-33864)
[»] scaffold0571 (1 HSPs)
scaffold0571 (151-218)||(546-613)
[»] scaffold0338 (1 HSPs)
scaffold0338 (152-218)||(6489-6555)
[»] scaffold0581 (1 HSPs)
scaffold0581 (170-217)||(8333-8380)
[»] scaffold0050 (1 HSPs)
scaffold0050 (151-190)||(20978-21017)
[»] scaffold0004 (1 HSPs)
scaffold0004 (152-193)||(96001-96042)
[»] scaffold0516 (1 HSPs)
scaffold0516 (150-194)||(1248-1292)
[»] scaffold0249 (1 HSPs)
scaffold0249 (150-194)||(23544-23588)
[»] scaffold0194 (1 HSPs)
scaffold0194 (144-196)||(28673-28725)


Alignment Details
Target: chr2 (Bit Score: 87; Significance: 1e-41; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 26 - 157
Target Start/End: Original strand, 4578458 - 4578589
Alignment:
Q  26 agtactaatgtactttagcgtatatgtagtggattcattaattatataattgatggttaagtaaagcaaaaacggcatgattatcattacgcnnnnnnng 125  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||| |       |    
T  4578458 agtactaatgtactttagcgtatatgtagtggattcattagttataaaattgatggttaagtaaagcaaaaactgcatgattatcattacacaaaaaaag 4578557  T
Q  126 tgatgaaagacaatagggcgggatcggttatg 157  Q
    ||||||||||||| || |||||||||||||||    
T  4578558 tgatgaaagacaacagtgcgggatcggttatg 4578589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 39355208 - 39355141
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  39355208 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 39355141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 18297162 - 18297236
Alignment:
Q  144 cgggatcggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||| |||||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18297162 cgggagcggttatggtgcatagggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 18297236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 7487147 - 7487212
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 216  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  7487147 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 7487212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 1292072 - 1292139
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  1292072 ggttatggtgcataaggaaatccttatgcaccgtgcataaattccaacataattgcttcctacacccc 1292139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 25194041 - 25193967
Alignment:
Q  144 cgggatcggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    |||||||||||||||||| |||  | |||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  25194041 cgggatcggttatggtgcataatgaaatccttatgcaccgtgcataaatcccaatataattgtttcctacacccc 25193967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 218
Target Start/End: Complemental strand, 8150000 - 8149937
Alignment:
Q  155 atggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||| |||| | ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8150000 atggtgcataaggaaatccttatgcaccatgcataaatcccaacataattgcttcctacacccc 8149937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 218
Target Start/End: Complemental strand, 8154624 - 8154561
Alignment:
Q  155 atggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||| |||| | ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8154624 atggtgcataaggaaatccttatgcaccatgcataaatcccaacataattgcttcctacacccc 8154561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 15016459 - 15016526
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||| |||| | || ||||||||||||||||||||| ||||||||||||||||||||||||    
T  15016459 ggttatggtgcataaggaaattcttatgcaccgtgcataaatctcaacataattgcttcctacacccc 15016526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 34464884 - 34464817
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||| | |||| | ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  34464884 ggttatggtccataaggaaatccttatgcaccgtgcataaatccaaacataattgcttcctacacccc 34464817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 215
Target Start/End: Complemental strand, 18762988 - 18762946
Alignment:
Q  173 cttatgcaccgtgcataaatcccaacataattgcttcctacac 215  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  18762988 cttatgcaccgtacataaatcccaacataattgcttcctacac 18762946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 4578590 - 4578625
Alignment:
Q  181 ccgtgcataaatcccaacataattgcttcctacacc 216  Q
    ||||||||||||||||||||||||||||||||||||    
T  4578590 ccgtgcataaatcccaacataattgcttcctacacc 4578625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 175 - 218
Target Start/End: Complemental strand, 2264673 - 2264630
Alignment:
Q  175 tatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||| || ||||||| |||||||||||||||||||||||||    
T  2264673 tatgcacagtacataaattccaacataattgcttcctacacccc 2264630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 183 - 218
Target Start/End: Complemental strand, 9143726 - 9143691
Alignment:
Q  183 gtgcataaatcccaacataattgcttcctacacccc 218  Q
    |||||||||| |||||||||||||||||||||||||    
T  9143726 gtgcataaattccaacataattgcttcctacacccc 9143691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 183 - 218
Target Start/End: Original strand, 14550465 - 14550500
Alignment:
Q  183 gtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||||||||| ||||||||||||||||||    
T  14550465 gtgcataaatcccaacaaaattgcttcctacacccc 14550500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 192
Target Start/End: Original strand, 42364492 - 42364534
Alignment:
Q  150 cggttatggtgcgtaagaagatccttatgcaccgtgcataaat 192  Q
    |||||||||||| |||||| ||||||||||||| |||||||||    
T  42364492 cggttatggtgcataagaaaatccttatgcaccctgcataaat 42364534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 30777286 - 30777339
Alignment:
Q  141 gggcgggatcggttatggtgcgtaagaagatccttatgcaccgtgcataaatcc 194  Q
    |||||||  |||||||||||| ||| || ||||||||||||| |||||||||||    
T  30777286 gggcgggcgcggttatggtgcataaaaaaatccttatgcaccctgcataaatcc 30777339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 41345088 - 41345129
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaat 192  Q
    ||||||||||| |||| | |||||||||||||||||||||||    
T  41345088 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 41345129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 31783793 - 31783837
Alignment:
Q  150 cggttatggtgcgtaagaagatccttatgcaccgtgcataaatcc 194  Q
    |||||||||||| |||| | ||||||||||||| |||||||||||    
T  31783793 cggttatggtgcataaggaaatccttatgcaccctgcataaatcc 31783837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 1e-26; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 39657703 - 39657776
Alignment:
Q  145 gggatcggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  39657703 gggatcggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 39657776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 139 - 218
Target Start/End: Original strand, 4835507 - 4835586
Alignment:
Q  139 tagggcgggatcggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    |||| ||||| |||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  4835507 taggtcgggagcggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 4835586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 145 - 218
Target Start/End: Complemental strand, 2751284 - 2751211
Alignment:
Q  145 gggatcggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    |||| |||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  2751284 gggagcggttatggtgcataagaaaatccttatgcaccgtgcatgaatcccaacataattgcttcctacacccc 2751211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 148 - 218
Target Start/End: Complemental strand, 1209832 - 1209762
Alignment:
Q  148 atcggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    |||| ||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1209832 atcgattatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 1209762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 151 - 217
Target Start/End: Original strand, 34633214 - 34633280
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacaccc 217  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||| |||||||    
T  34633214 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcttacaccc 34633280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 1149916 - 1149981
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 216  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||||||||    
T  1149916 ggttatggtgcataaggaaatccttatgcaccgtgcataaattccaacataattgcttcctacacc 1149981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 170 - 218
Target Start/End: Original strand, 4840983 - 4841031
Alignment:
Q  170 atccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  4840983 atccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 4841031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 170 - 218
Target Start/End: Complemental strand, 41099336 - 41099288
Alignment:
Q  170 atccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  41099336 atccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 41099288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 10237527 - 10237460
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||| |||| | |||||||||||||||| |||||||||||||||||||||| |||||||||    
T  10237527 ggttatggtgcataaggaaatccttatgcaccgtgtataaatcccaacataattgctttctacacccc 10237460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 15227203 - 15227140
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctaca 214  Q
    ||||||||||| |||| | ||||||||||||||| |||||||||||||||||||||||||||||    
T  15227203 ggttatggtgcataaggaaatccttatgcaccgtacataaatcccaacataattgcttcctaca 15227140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 30414087 - 30414024
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctaca 214  Q
    ||||||||||| |||| | ||| |||||||||||||||||||||||||||||||||||||||||    
T  30414087 ggttatggtgcataaggaaatctttatgcaccgtgcataaatcccaacataattgcttcctaca 30414024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 145 - 215
Target Start/End: Complemental strand, 7059214 - 7059144
Alignment:
Q  145 gggatcggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacac 215  Q
    ||||||||||||||||| |||| | ||| ||||||||||||||||||| |||||||||||| |||||||||    
T  7059214 gggatcggttatggtgcataaggaaatcattatgcaccgtgcataaattccaacataattgtttcctacac 7059144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 41451278 - 41451213
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 216  Q
    ||||||||||  |||| | |||||||||||| ||||||||||||||||||||||||||||||||||    
T  41451278 ggttatggtgtataaggaaatccttatgcactgtgcataaatcccaacataattgcttcctacacc 41451213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 217
Target Start/End: Complemental strand, 19784444 - 19784378
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacaccc 217  Q
    ||||||| ||| |||| | |||||||||||  |||||||||||||||||||||||||||||||||||    
T  19784444 ggttatgatgcataaggaaatccttatgcattgtgcataaatcccaacataattgcttcctacaccc 19784378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 218
Target Start/End: Complemental strand, 7857821 - 7857786
Alignment:
Q  183 gtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||||||||||||||||||||||||||||    
T  7857821 gtgcataaatcccaacataattgcttcctacacccc 7857786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 218
Target Start/End: Complemental strand, 43690784 - 43690746
Alignment:
Q  180 accgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  43690784 accgtgcataaatcccaacataattgctttctacacccc 43690746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 145 - 198
Target Start/End: Original strand, 15259850 - 15259903
Alignment:
Q  145 gggatcggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaac 198  Q
    |||| ||||||||| || |||| | |||||||||||||||||||||||||||||    
T  15259850 gggagcggttatggggcataaggaaatccttatgcaccgtgcataaatcccaac 15259903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 15808885 - 15808929
Alignment:
Q  150 cggttatggtgcgtaagaagatccttatgcaccgtgcataaatcc 194  Q
    |||||||||||| |||||| ||||||||||||| |||||||||||    
T  15808885 cggttatggtgcataagaaaatccttatgcaccctgcataaatcc 15808929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 193
Target Start/End: Original strand, 35301630 - 35301672
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatc 193  Q
    ||||||||||| |||| | ||||||||||||||||||||||||    
T  35301630 ggttatggtgcataaggaaatccttatgcaccgtgcataaatc 35301672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 196
Target Start/End: Complemental strand, 9853299 - 9853254
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatccca 196  Q
    ||||||||||| ||| || |||||||||||| ||||||||||||||    
T  9853299 ggttatggtgcataaaaaaatccttatgcactgtgcataaatccca 9853254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 196
Target Start/End: Complemental strand, 23397486 - 23397441
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatccca 196  Q
    ||||||||||| |||| | ||||||||||||| |||||||||||||    
T  23397486 ggttatggtgcataaggaaatccttatgcaccatgcataaatccca 23397441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 10585859 - 10585903
Alignment:
Q  149 tcggttatggtgcgtaagaagatccttatgcaccgtgcataaatc 193  Q
    ||||||| ||||| |||||| ||||||||||||| ||||||||||    
T  10585859 tcggttacggtgcataagaaaatccttatgcaccatgcataaatc 10585903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 17792936 - 17792892
Alignment:
Q  150 cggttatggtgcgtaagaagatccttatgcaccgtgcataaatcc 194  Q
    |||||||||||| |||| | ||||||||||||| |||||||||||    
T  17792936 cggttatggtgcataaggaaatccttatgcaccctgcataaatcc 17792892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 23347765 - 23347721
Alignment:
Q  150 cggttatggtgcgtaagaagatccttatgcaccgtgcataaatcc 194  Q
    |||||||||||| |||||| ||||||||| ||| |||||||||||    
T  23347765 cggttatggtgcataagaaaatccttatgaaccctgcataaatcc 23347721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 35448654 - 35448610
Alignment:
Q  150 cggttatggtgcgtaagaagatccttatgcaccgtgcataaatcc 194  Q
    |||||||||||| |||| | ||||||||||||| |||||||||||    
T  35448654 cggttatggtgcataaggaaatccttatgcaccctgcataaatcc 35448610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 2e-25; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 145 - 216
Target Start/End: Complemental strand, 48692099 - 48692028
Alignment:
Q  145 gggatcggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 216  Q
    ||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  48692099 gggatcggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 48692028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 46358693 - 46358626
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  46358693 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 46358626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 47340320 - 47340253
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  47340320 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 47340253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 151 - 217
Target Start/End: Original strand, 41911005 - 41911071
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacaccc 217  Q
    ||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41911005 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccc 41911071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 46572568 - 46572642
Alignment:
Q  144 cgggatcggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||| |||||||||||| |||| | ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  46572568 cgggagcggttatggtgcataaggaaatccttatgcaccatgcataaatcccaacataattgcttcctacacccc 46572642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 763870 - 763803
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||| |||| | |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  763870 ggttatggtgcataaggaaatccttatgcactgtgcataaatcccaacataattgcttcctacacccc 763803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 16933136 - 16933203
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||| |||| | |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16933136 ggttatggtgcataaggaaatccttatgcaccgtgcataaatctcaacataattgcttcctacacccc 16933203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 16938519 - 16938586
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||| |||| | |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16938519 ggttatggtgcataaggaaatccttatgcaccgtgcataaatctcaacataattgcttcctacacccc 16938586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 30884115 - 30884182
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||| |||| | ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  30884115 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcctaacataattgcttcctacacccc 30884182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 31660242 - 31660175
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||| |||| | |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  31660242 ggttatggtgcataaggaaatccttatgcaccgtgcataaatctcaacataattgcttcctacacccc 31660175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 35737121 - 35737058
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctaca 214  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  35737121 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 35737058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 150 - 218
Target Start/End: Original strand, 15973860 - 15973928
Alignment:
Q  150 cggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    |||||||||||| |||| | ||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  15973860 cggttatggtgcataaggaaatccttatgcaccatgcataaatcccaacatagttgcttcctacacccc 15973928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 145 - 217
Target Start/End: Original strand, 32685839 - 32685911
Alignment:
Q  145 gggatcggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacaccc 217  Q
    |||| |||||||||||| |||| | |||||||| ||||||||||||||| |||||||||||||||||||||||    
T  32685839 gggagcggttatggtgcataaggaaatccttatacaccgtgcataaatctcaacataattgcttcctacaccc 32685911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 34228606 - 34228654
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaaca 199  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  34228606 ggttatggtgcataagaaaatccttatgcaccgtgcataaatcccaaca 34228654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 48306399 - 48306331
Alignment:
Q  144 cgggatcggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 216  Q
    |||||||||||||||||| ||||    | |||||||||||||||||||||||||||||||| |||||||||||    
T  48306399 cgggatcggttatggtgcataagg---ttcttatgcaccgtgcataaatcccaacataatt-cttcctacacc 48306331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 11732036 - 11732085
Alignment:
Q  144 cgggatcggttatggtgcgtaagaagatccttatgcaccgtgcataaatc 193  Q
    ||||| |||||||||||| |||| | ||||||||||||||||||||||||    
T  11732036 cgggagcggttatggtgcataaggaaatccttatgcaccgtgcataaatc 11732085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 48830642 - 48830601
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaat 192  Q
    ||||||||||| |||| | |||||||||||||||||||||||    
T  48830642 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 48830601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 5728924 - 5728880
Alignment:
Q  150 cggttatggtgcgtaagaagatccttatgcaccgtgcataaatcc 194  Q
    |||||||||||| |||||| || |||||||||| |||||||||||    
T  5728924 cggttatggtgcataagaaaattcttatgcaccctgcataaatcc 5728880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 26945758 - 26945714
Alignment:
Q  150 cggttatggtgcgtaagaagatccttatgcaccgtgcataaatcc 194  Q
    |||||||||||| |||| | ||||||||||||| |||||||||||    
T  26945758 cggttatggtgcataaggaaatccttatgcaccctgcataaatcc 26945714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 38837773 - 38837729
Alignment:
Q  150 cggttatggtgcgtaagaagatccttatgcaccgtgcataaatcc 194  Q
    |||||||||||| |||| | ||||||||||||| |||||||||||    
T  38837773 cggttatggtgcataaggaaatccttatgcaccttgcataaatcc 38837729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 44426598 - 44426642
Alignment:
Q  150 cggttatggtgcgtaagaagatccttatgcaccgtgcataaatcc 194  Q
    |||||||||||| |||| | ||||||||||||| |||||||||||    
T  44426598 cggttatggtgcataaggaaatccttatgcaccctgcataaatcc 44426642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 45478558 - 45478514
Alignment:
Q  150 cggttatggtgcgtaagaagatccttatgcaccgtgcataaatcc 194  Q
    |||||||||||| |||||| ||||||||||| | |||||||||||    
T  45478558 cggttatggtgcataagaaaatccttatgcatcttgcataaatcc 45478514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 2e-25; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 143 - 218
Target Start/End: Complemental strand, 45256946 - 45256871
Alignment:
Q  143 gcgggatcggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    |||||| |||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  45256946 gcgggagcggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 45256871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 639044 - 638970
Alignment:
Q  144 cgggatcggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    |||||||| ||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  639044 cgggatcgattatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 638970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 11786147 - 11786080
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11786147 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 11786080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 11798314 - 11798247
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11798314 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 11798247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 13635618 - 13635685
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  13635618 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 13635685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 30597872 - 30597805
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  30597872 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 30597805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 49425950 - 49426017
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  49425950 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 49426017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 15051029 - 15051096
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||| |||| | ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15051029 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcctaacataattgcttcctacacccc 15051096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 152 - 215
Target Start/End: Original strand, 49492406 - 49492469
Alignment:
Q  152 gttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacac 215  Q
    |||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  49492406 gttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 49492469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 50644713 - 50644646
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  50644713 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctatacccc 50644646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 218
Target Start/End: Complemental strand, 10473697 - 10473624
Alignment:
Q  145 gggatcggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    |||| |||||||||||| |||| | ||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  10473697 gggagcggttatggtgcataaggaaatccttatgcaccgtgcataaattccaacctaattgcttcctacacccc 10473624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 150 - 218
Target Start/End: Original strand, 26577261 - 26577329
Alignment:
Q  150 cggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    |||||||||||| |||| | |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  26577261 cggttatggtgcataaggaaatccttatgcaccgtgcataaatttcaacataattgcttcctacacccc 26577329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 170 - 218
Target Start/End: Original strand, 35291460 - 35291508
Alignment:
Q  170 atccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  35291460 atccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 35291508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 170 - 218
Target Start/End: Original strand, 51921177 - 51921225
Alignment:
Q  170 atccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  51921177 atccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 51921225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 27865630 - 27865697
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||  |||| | ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  27865630 ggttatggtgtataaggaaatccttatgcaccatgcataaatcccaacataattgcttcctacacccc 27865697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 53441493 - 53441426
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||| |||| | |||||||||||||| |||||||| |||||||||||||||||||||||||    
T  53441493 ggttatggtgcataaggaaatccttatgcaccgggcataaattccaacataattgcttcctacacccc 53441426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 150 - 218
Target Start/End: Original strand, 51836327 - 51836395
Alignment:
Q  150 cggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    |||||||||||| |||| | ||  ||||||| |||||||||||||||||||||||||||||||||||||    
T  51836327 cggttatggtgcataaggaaatttttatgcatcgtgcataaatcccaacataattgcttcctacacccc 51836395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 46672611 - 46672544
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||| ||| |||| | || |||||||| ||||||||||||||||||| |||||||||||||||||    
T  46672611 ggttatgttgcataaggaaattcttatgcatcgtgcataaatcccaacatgattgcttcctacacccc 46672544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 180 - 218
Target Start/End: Complemental strand, 1622020 - 1621982
Alignment:
Q  180 accgtgcataaatcccaacataattgcttcctacacccc 218  Q
    |||||||||||||||||||||||||||||||||||||||    
T  1622020 accgtgcataaatcccaacataattgcttcctacacccc 1621982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 36011995 - 36011949
Alignment:
Q  172 ccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||    
T  36011995 ccttatgcaccgtgtataaatctcaacataattgcttcctacacccc 36011949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 22180201 - 22180252
Alignment:
Q  145 gggatcggttatggtgcgtaagaagatccttatgcaccgtgcataaatccca 196  Q
    |||| |||||||||||| |||| | |||||||||||||||||||||||||||    
T  22180201 gggagcggttatggtgcataaggaaatccttatgcaccgtgcataaatccca 22180252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 55765635 - 55765596
Alignment:
Q  170 atccttatgcaccgtgcataaatcccaacataattgcttc 209  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  55765635 atccttatgcaccgtgcataaatcccaatataattgcttc 55765596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 151 - 196
Target Start/End: Complemental strand, 30358880 - 30358835
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatccca 196  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||    
T  30358880 ggttatggtgcataaggaaatccttatgcaccgtgcataaatccca 30358835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 25715771 - 25715727
Alignment:
Q  150 cggttatggtgcgtaagaagatccttatgcaccgtgcataaatcc 194  Q
    |||||||||||| |||||| ||||||||||||| |||||||||||    
T  25715771 cggttatggtgcataagaaaatccttatgcaccctgcataaatcc 25715727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 54895404 - 54895448
Alignment:
Q  150 cggttatggtgcgtaagaagatccttatgcaccgtgcataaatcc 194  Q
    |||||||||||| |||||| ||||||||||||| |||||||||||    
T  54895404 cggttatggtgcataagaaaatccttatgcaccctgcataaatcc 54895448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 150 - 193
Target Start/End: Complemental strand, 36309661 - 36309618
Alignment:
Q  150 cggttatggtgcgtaagaagatccttatgcaccgtgcataaatc 193  Q
    |||||||||||| |||||| ||||||||||||| ||||||||||    
T  36309661 cggttatggtgcataagaaaatccttatgcaccctgcataaatc 36309618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 183 - 218
Target Start/End: Complemental strand, 38245929 - 38245894
Alignment:
Q  183 gtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||||||||||||||| ||||||||||||    
T  38245929 gtgcataaatcccaacataattgtttcctacacccc 38245894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 36924232 - 36924285
Alignment:
Q  141 gggcgggatcggttatggtgcgtaagaagatccttatgcaccgtgcataaatcc 194  Q
    |||||||  |||||||||||| |||| | ||||||||||||| |||||||||||    
T  36924232 gggcgggtgcggttatggtgcataaggaaatccttatgcaccctgcataaatcc 36924285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 8165762 - 8165806
Alignment:
Q  150 cggttatggtgcgtaagaagatccttatgcaccgtgcataaatcc 194  Q
    |||||||||||| |||| | ||||||||||||| |||||||||||    
T  8165762 cggttatggtgcataaggaaatccttatgcaccctgcataaatcc 8165806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 17109962 - 17109918
Alignment:
Q  150 cggttatggtgcgtaagaagatccttatgcaccgtgcataaatcc 194  Q
    |||||||||||| |||| | ||||||||||||| |||||||||||    
T  17109962 cggttatggtgcataaggaaatccttatgcaccctgcataaatcc 17109918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 21995670 - 21995714
Alignment:
Q  150 cggttatggtgcgtaagaagatccttatgcaccgtgcataaatcc 194  Q
    |||||||||||| |||| | ||||||||||||| |||||||||||    
T  21995670 cggttatggtgcataaggaaatccttatgcaccctgcataaatcc 21995714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 30779343 - 30779387
Alignment:
Q  150 cggttatggtgcgtaagaagatccttatgcaccgtgcataaatcc 194  Q
    |||||||||||| |||| | ||||||||||||| |||||||||||    
T  30779343 cggttatggtgcataaggaaatccttatgcaccttgcataaatcc 30779387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 37059711 - 37059755
Alignment:
Q  150 cggttatggtgcgtaagaagatccttatgcaccgtgcataaatcc 194  Q
    |||||||||||| |||| | ||||||||||||| |||||||||||    
T  37059711 cggttatggtgcataaggaaatccttatgcaccttgcataaatcc 37059755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 47567896 - 47567940
Alignment:
Q  150 cggttatggtgcgtaagaagatccttatgcaccgtgcataaatcc 194  Q
    |||||||||||  |||||| ||||||||||||| |||||||||||    
T  47567896 cggttatggtgaataagaaaatccttatgcaccttgcataaatcc 47567940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 53865287 - 53865243
Alignment:
Q  150 cggttatggtgcgtaagaagatccttatgcaccgtgcataaatcc 194  Q
    |||||||||||| |||| | ||||||||||||| |||||||||||    
T  53865287 cggttatggtgcataaggaaatccttatgcaccctgcataaatcc 53865243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 145 - 218
Target Start/End: Complemental strand, 50755241 - 50755168
Alignment:
Q  145 gggatcggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    |||||| |||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  50755241 gggatcagttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 50755168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 9595873 - 9595940
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  9595873 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 9595940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 30947804 - 30947871
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  30947804 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 30947871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 151 - 217
Target Start/End: Original strand, 6097577 - 6097643
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacaccc 217  Q
    ||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6097577 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccc 6097643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 19384376 - 19384449
Alignment:
Q  145 gggatcggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    |||| |||||||||||| |||| | || ||||||||||||||||||||||||||||||||||||||||||||||    
T  19384376 gggagcggttatggtgcataaggaaattcttatgcaccgtgcataaatcccaacataattgcttcctacacccc 19384449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 54379335 - 54379270
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 216  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  54379335 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 54379270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 3475300 - 3475363
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctaca 214  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  3475300 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 3475363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 9106440 - 9106373
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  9106440 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaatataattgcttcctacacccc 9106373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 19284844 - 19284781
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctaca 214  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  19284844 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 19284781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 26662431 - 26662498
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||| |||| | |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  26662431 ggttatggtgcataaggaaatccttatgcactgtgcataaatcccaacataattgcttcctacacccc 26662498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 153 - 218
Target Start/End: Original strand, 2941821 - 2941886
Alignment:
Q  153 ttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||| |||| | ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  2941821 ttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgctttctacacccc 2941886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 51361518 - 51361591
Alignment:
Q  145 gggatcggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    |||| |||||||||||| |||| | |||||||||||||||| |||||||| |||||||||||||||||||||||    
T  51361518 gggagcggttatggtgcataaggaaatccttatgcaccgtgtataaatcctaacataattgcttcctacacccc 51361591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 10986525 - 10986462
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctaca 214  Q
    ||||||||||| |||| | |||||||||||||||||||||||| ||||||||||||||||||||    
T  10986525 ggttatggtgcataaggaaatccttatgcaccgtgcataaatctcaacataattgcttcctaca 10986462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 26960799 - 26960732
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||| |||| | ||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  26960799 ggttatggtgcataaggaaatctttatgcaccgtgcataaatcccaatataattgcttcctacacccc 26960732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 31853207 - 31853164
Alignment:
Q  173 cttatgcaccgtgcataaatcccaacataattgcttcctacacc 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  31853207 cttatgcaccgtgcataaatcccaacataattgcttcctacacc 31853164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 151 - 217
Target Start/End: Original strand, 33413905 - 33413972
Alignment:
Q  151 ggttatggtgcgtaagaagatcc-ttatgcaccgtgcataaatcccaacataattgcttcctacaccc 217  Q
    ||||||||||| |||| | |||| |||||||||||||||||||||||| |||||||||||||||||||    
T  33413905 ggttatggtgcataaggaaatcccttatgcaccgtgcataaatcccaatataattgcttcctacaccc 33413972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 46237651 - 46237718
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||| |||| | |||||||| ||||||||||||||||||||||||||||||| ||| ||||    
T  46237651 ggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcatactcccc 46237718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 171 - 218
Target Start/End: Complemental strand, 47335185 - 47335138
Alignment:
Q  171 tccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  47335185 tccttatgcaccgtgcataaatcccaacataattgtttcctacacccc 47335138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 8719187 - 8719133
Alignment:
Q  144 cgggatcggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaac 198  Q
    ||||| |||||||||||| |||| | |||||||||||||||||||||||||||||    
T  8719187 cgggagcggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaac 8719133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 9071074 - 9071020
Alignment:
Q  144 cgggatcggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaac 198  Q
    ||||| |||||||||||| |||| | |||||||||||||||||||||||||||||    
T  9071074 cgggagcggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaac 9071020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 193
Target Start/End: Original strand, 34562400 - 34562442
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatc 193  Q
    ||||||||||| |||| | ||||||||||||||||||||||||    
T  34562400 ggttatggtgcataaggaaatccttatgcaccgtgcataaatc 34562442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 194
Target Start/End: Original strand, 16276664 - 16276713
Alignment:
Q  145 gggatcggttatggtgcgtaagaagatccttatgcaccgtgcataaatcc 194  Q
    |||| |||||||||||| |||  | |||||||||||||||||||||||||    
T  16276664 gggagcggttatggtgcataaagaaatccttatgcaccgtgcataaatcc 16276713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 8036800 - 8036844
Alignment:
Q  150 cggttatggtgcgtaagaagatccttatgcaccgtgcataaatcc 194  Q
    |||||||||||| |||| | ||||||||||||| |||||||||||    
T  8036800 cggttatggtgcataaggaaatccttatgcaccctgcataaatcc 8036844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 36185949 - 36185905
Alignment:
Q  150 cggttatggtgcgtaagaagatccttatgcaccgtgcataaatcc 194  Q
    |||||||||||| |||| | ||||||||||||| |||||||||||    
T  36185949 cggttatggtgcataaggaaatccttatgcaccctgcataaatcc 36185905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 50416480 - 50416524
Alignment:
Q  150 cggttatggtgcgtaagaagatccttatgcaccgtgcataaatcc 194  Q
    |||||||||||| |||| | ||||||||||||| |||||||||||    
T  50416480 cggttatggtgcataaggaaatccttatgcaccctgcataaatcc 50416524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 50416608 - 50416564
Alignment:
Q  150 cggttatggtgcgtaagaagatccttatgcaccgtgcataaatcc 194  Q
    |||||||||||| |||| | ||||||||||||| |||||||||||    
T  50416608 cggttatggtgcataaggaaatccttatgcaccctgcataaatcc 50416564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 9e-24; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 150 - 218
Target Start/End: Original strand, 23174402 - 23174470
Alignment:
Q  150 cggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    |||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  23174402 cggttatggtgcataagaaaattcttatgcaccgtgcataaatcccaacataattgcttcctacacccc 23174470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 23817483 - 23817416
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23817483 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 23817416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 24636099 - 24636032
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  24636099 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 24636032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 48762224 - 48762291
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  48762224 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 48762291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 49936830 - 49936897
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  49936830 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 49936897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 16976128 - 16976061
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||| |||| | ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  16976128 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcctaacataattgcttcctacacccc 16976061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 43452715 - 43452648
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  43452715 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgtttcctacacccc 43452648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 152 - 218
Target Start/End: Complemental strand, 18619006 - 18618941
Alignment:
Q  152 gttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    |||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18619006 gttatggtgcataagga-atccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 18618941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 4097105 - 4097177
Alignment:
Q  145 gggatcggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    |||| |||||||||||| |||| | ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4097105 gggagcggttatggtgcataagga-atccttatgcaccgtgcttaaatcccaacataattgcttcctacacccc 4097177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 218
Target Start/End: Complemental strand, 11422619 - 11422546
Alignment:
Q  145 gggatcggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    |||| |||||||||||| |||| | ||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  11422619 gggagcggttatggtgcataaggaaatccttatgcatcgtgcataaattccaacataattgcttcctacacccc 11422546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 19897653 - 19897718
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 216  Q
    ||||||||||| |||| | |||||||||||||||||| ||||||||||||||||||||||||||||    
T  19897653 ggttatggtgcataaggaaatccttatgcaccgtgcagaaatcccaacataattgcttcctacacc 19897718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 23920966 - 23921039
Alignment:
Q  145 gggatcggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    |||| |||||||||||| |||| | ||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  23920966 gggagcggttatggtgcataaggaaatccttatgcatcgtgcataaatcccaacataattgtttcctacacccc 23921039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 21641588 - 21641660
Alignment:
Q  144 cgggatcggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 216  Q
    ||||| |||||||| ||| |||| | |||||||||||||||||| ||||||||||||||||||||||||||||    
T  21641588 cgggagcggttatgctgcataaggaaatccttatgcaccgtgcacaaatcccaacataattgcttcctacacc 21641660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 20434615 - 20434682
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||| |||| | ||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  20434615 ggttatggtgcataaggaaatcattatgcaccatgcataaatcccaacataattgcttcctacacccc 20434682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 25888922 - 25888988
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||| |||| | ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  25888922 ggttatggtgcataagga-atccttatgcaccgtgcataaatcctaacataattgcttcctacacccc 25888988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 171 - 218
Target Start/End: Complemental strand, 50351956 - 50351909
Alignment:
Q  171 tccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  50351956 tccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 50351909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 6314289 - 6314226
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctaca 214  Q
    ||||||||||| |||| | |||||||||||||||  ||||||||||||||||||||||||||||    
T  6314289 ggttatggtgcataaggaaatccttatgcaccgtatataaatcccaacataattgcttcctaca 6314226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 215
Target Start/End: Complemental strand, 180902 - 180832
Alignment:
Q  145 gggatcggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacac 215  Q
    |||| |||||||||||  |||  | |||||||||||||||| |||||||||||||||||||||||||||||    
T  180902 gggagcggttatggtgtataaagaaatccttatgcaccgtgtataaatcccaacataattgcttcctacac 180832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 34370537 - 34370495
Alignment:
Q  174 ttatgcaccgtgcataaatcccaacataattgcttcctacacc 216  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  34370537 ttatgcaccgtgcataaatcctaacataattgcttcctacacc 34370495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 8401423 - 8401468
Alignment:
Q  171 tccttatgcaccgtgcataaatcccaacataattgcttcctacacc 216  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||    
T  8401423 tccttatgtaccgtgcataaatcccaacataattgtttcctacacc 8401468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 18057858 - 18057807
Alignment:
Q  145 gggatcggttatggtgcgtaagaagatccttatgcaccgtgcataaatccca 196  Q
    |||| |||||||||||  |||| | |||||||||||||||||||||||||||    
T  18057858 gggagcggttatggtgtataaggaaatccttatgcaccgtgcataaatccca 18057807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 192
Target Start/End: Complemental strand, 45890642 - 45890595
Alignment:
Q  145 gggatcggttatggtgcgtaagaagatccttatgcaccgtgcataaat 192  Q
    |||| |||||||||||  |||||| |||||||||||||||||||||||    
T  45890642 gggagcggttatggtgtataagaaaatccttatgcaccgtgcataaat 45890595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 196
Target Start/End: Original strand, 21255841 - 21255886
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatccca 196  Q
    ||||||||||| |||| | |||||||| ||||||||||||||||||    
T  21255841 ggttatggtgcataaggaaatccttatacaccgtgcataaatccca 21255886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 9628643 - 9628599
Alignment:
Q  150 cggttatggtgcgtaagaagatccttatgcaccgtgcataaatcc 194  Q
    |||||||||||| |||| | ||||||||||||| |||||||||||    
T  9628643 cggttatggtgcataaggaaatccttatgcaccctgcataaatcc 9628599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 33156992 - 33157036
Alignment:
Q  150 cggttatggtgcgtaagaagatccttatgcaccgtgcataaatcc 194  Q
    |||||||||||| |||| | ||||||||||||| |||||||||||    
T  33156992 cggttatggtgcataaggaaatccttatgcaccctgcataaatcc 33157036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 42134177 - 42134133
Alignment:
Q  150 cggttatggtgcgtaagaagatccttatgcaccgtgcataaatcc 194  Q
    |||||||||||| |||| | ||||||||||||| |||||||||||    
T  42134177 cggttatggtgcataaggaaatccttatgcaccctgcataaatcc 42134133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 24447 - 24380
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  24447 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 24380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 4e-23; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 1449715 - 1449648
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1449715 ggttatggtgcataagaaaatccttatgcaccgtgcataaatcccaacataattgtttcctacacccc 1449648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 6900976 - 6900909
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6900976 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 6900909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 15493347 - 15493280
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  15493347 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 15493280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 7089255 - 7089188
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||| |||| | ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  7089255 ggttatggtgcataaggaaatccttatgtaccgtgcataaatcccaacataattgcttcctacacccc 7089188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 878440 - 878366
Alignment:
Q  144 cgggatcggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||| |||||||||||| |||| | ||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  878440 cgggagcggttatggtgcataaggaaatccttatgtaccgtgcataaatcccaacataattacttcctacacccc 878366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 34869956 - 34870021
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 216  Q
    ||||||||||| |||| | ||||||||||||||||||||||||| |||||||||||||||||||||    
T  34869956 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcctaacataattgcttcctacacc 34870021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 35121543 - 35121495
Alignment:
Q  169 gatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  35121543 gatccttatgcaccgtgcataaatcccaacataattgctt-ctacacccc 35121495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 33345355 - 33345395
Alignment:
Q  169 gatccttatgcaccgtgcataaatcccaacataattgcttc 209  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  33345355 gatccttatgcaccgtgcataaatcccaacataattgcttc 33345395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 31216835 - 31216768
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||| |||| | || |||||| |||||| |||||| |||||||||||||||||||||||||    
T  31216835 ggttatggtgcataaggaaattcttatggaccgtgtataaattccaacataattgcttcctacacccc 31216768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 1536814 - 1536856
Alignment:
Q  176 atgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  1536814 atgcaccgtgcataaatcccaatataattgcttcctacacccc 1536856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 22857721 - 22857677
Alignment:
Q  150 cggttatggtgcgtaagaagatccttatgcaccgtgcataaatcc 194  Q
    |||||||||||| |||||| ||||||||||||| |||||||||||    
T  22857721 cggttatggtgcataagaaaatccttatgcaccctgcataaatcc 22857677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 7765447 - 7765406
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaat 192  Q
    ||||||||||| |||| | |||||||||||||||||||||||    
T  7765447 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 7765406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 15035033 - 15034992
Alignment:
Q  152 gttatggtgcgtaagaagatccttatgcaccgtgcataaatc 193  Q
    |||||||||| |||| | ||||||||||||||||||||||||    
T  15035033 gttatggtgcataaggaaatccttatgcaccgtgcataaatc 15034992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 218
Target Start/End: Original strand, 24736574 - 24736603
Alignment:
Q  189 aaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||||||||||||||||||||||    
T  24736574 aaatcccaacataattgcttcctacacccc 24736603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 218
Target Start/End: Original strand, 24736610 - 24736639
Alignment:
Q  189 aaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||||||||||||||||||||||    
T  24736610 aaatcccaacataattgcttcctacacccc 24736639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 196
Target Start/End: Complemental strand, 30909482 - 30909437
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatccca 196  Q
    ||||||||||| |||| |  ||||||||||||||||||||||||||    
T  30909482 ggttatggtgcataaggaattccttatgcaccgtgcataaatccca 30909437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 4e-23; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 14394641 - 14394574
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  14394641 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 14394574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 14940249 - 14940316
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  14940249 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 14940316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 26637730 - 26637797
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  26637730 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 26637797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 37456853 - 37456786
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||| |||| | ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  37456853 ggttatggtgcataaggaaatccttatgcaccatgcataaatcccaacataattgcttcctacacccc 37456786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 3883928 - 3883993
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 216  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||| ||||||||||||||||||    
T  3883928 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaatataattgcttcctacacc 3883993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 15416837 - 15416773
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacac 215  Q
    ||||||| ||| |||| | ||||||||||||||||||||||||||||||| ||||||||||||||    
T  15416837 ggttatgatgcataaggaaatccttatgcaccgtgcataaatcccaacatgattgcttcctacac 15416773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 30783630 - 30783564
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||| ||| |||| | ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  30783630 ggttatgatgcataaggaaatccttatgcaccgtgcataaat-ccaacataattgcttcctacacccc 30783564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 215
Target Start/End: Original strand, 28069242 - 28069312
Alignment:
Q  145 gggatcggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacac 215  Q
    |||| |||||||||||  |||| | |||||||||||||| |||||||| ||||||||||||||||||||||    
T  28069242 gggagcggttatggtgtataaggaaatccttatgcaccgagcataaattccaacataattgcttcctacac 28069312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 13553156 - 13553091
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 216  Q
    ||||||||||| |||| | |||||||||||||||| |||||||| || ||||||||||||||||||    
T  13553156 ggttatggtgcataaggaaatccttatgcaccgtgtataaatcctaatataattgcttcctacacc 13553091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 214
Target Start/End: Complemental strand, 34330232 - 34330166
Alignment:
Q  143 gcgggatcggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctaca 214  Q
    ||||||||||||||||||| ||     ||||||||||||||||||||||| |||||||||||||||| ||||    
T  34330232 gcgggatcggttatggtgcata-----atccttatgcaccgtgcataaattccaacataattgcttcataca 34330166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 196
Target Start/End: Complemental strand, 13363838 - 13363792
Alignment:
Q  150 cggttatggtgcgtaagaagatccttatgcaccgtgcataaatccca 196  Q
    ||||||||||||  ||| | |||||||||||||||||||||||||||    
T  13363838 cggttatggtgcacaaggaaatccttatgcaccgtgcataaatccca 13363792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 192
Target Start/End: Original strand, 39086517 - 39086559
Alignment:
Q  150 cggttatggtgcgtaagaagatccttatgcaccgtgcataaat 192  Q
    |||||||||||| |||||| ||||||||||||| |||||||||    
T  39086517 cggttatggtgcataagaaaatccttatgcaccctgcataaat 39086559  T

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Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 192
Target Start/End: Complemental strand, 39166384 - 39166342
Alignment:
Q  150 cggttatggtgcgtaagaagatccttatgcaccgtgcataaat 192  Q
    |||||||||||| |||||| ||||||||||||| |||||||||    
T  39166384 cggttatggtgcataagaaaatccttatgcaccctgcataaat 39166342  T

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Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 194
Target Start/End: Complemental strand, 11661027 - 11660982
Alignment:
Q  149 tcggttatggtgcgtaagaagatccttatgcaccgtgcataaatcc 194  Q
    ||||||||||||| |||| | ||||||||||||| |||||||||||    
T  11661027 tcggttatggtgcataaggaaatccttatgcaccctgcataaatcc 11660982  T

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Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 22695584 - 22695540
Alignment:
Q  150 cggttatggtgcgtaagaagatccttatgcaccgtgcataaatcc 194  Q
    |||||||||||| |||| | ||||||||||||| |||||||||||    
T  22695584 cggttatggtgcataaggaaatccttatgcaccttgcataaatcc 22695540  T

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Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 187
Target Start/End: Complemental strand, 23948624 - 23948588
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgca 187  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  23948624 ggttatggtgcataagaaaatccttatgcaccgtgca 23948588  T

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Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 39861824 - 39861780
Alignment:
Q  150 cggttatggtgcgtaagaagatccttatgcaccgtgcataaatcc 194  Q
    |||||||||||| |||| | ||||||||||||| |||||||||||    
T  39861824 cggttatggtgcataaggaaatccttatgcaccctgcataaatcc 39861780  T

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Target: scaffold0045 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 33864 - 33790
Alignment:
Q  144 cgggatcggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    |||||| ||||||||||| |||| | ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  33864 cgggattggttatggtgcataaggaaatctttatgcaccgtgcataaatcccaacataattgcttcctacacccc 33790  T

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Target: scaffold0571 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 546 - 613
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  546 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaatataattgcttcctacacccc 613  T

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Target: scaffold0338 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 152 - 218
Target Start/End: Complemental strand, 6555 - 6489
Alignment:
Q  152 gttatggtgcgtaagaagatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc 218  Q
    |||||||||| |||| | ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6555 gttatggtgcataaggaaatccttatgcaccatgcataaatcccaacataattgcttcctacacccc 6489  T

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Target: scaffold0581 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0581
Description:

Target: scaffold0581; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 8333 - 8380
Alignment:
Q  170 atccttatgcaccgtgcataaatcccaacataattgcttcctacaccc 217  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  8333 atccttatgcaccgtgcataaatcccaacataattgctttctacaccc 8380  T

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Target: scaffold0050 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 151 - 190
Target Start/End: Original strand, 20978 - 21017
Alignment:
Q  151 ggttatggtgcgtaagaagatccttatgcaccgtgcataa 190  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  20978 ggttatggtgcataagaaaatccttatgcaccgtgcataa 21017  T

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Target: scaffold0004 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 96001 - 96042
Alignment:
Q  152 gttatggtgcgtaagaagatccttatgcaccgtgcataaatc 193  Q
    |||||||||| |||||| ||||||||||||| ||||||||||    
T  96001 gttatggtgcataagaaaatccttatgcaccctgcataaatc 96042  T

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Target: scaffold0516 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 1292 - 1248
Alignment:
Q  150 cggttatggtgcgtaagaagatccttatgcaccgtgcataaatcc 194  Q
    |||||||||||| |||| | ||||||||||||| |||||||||||    
T  1292 cggttatggtgcataaggaaatccttatgcaccctgcataaatcc 1248  T

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Target: scaffold0249 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 23544 - 23588
Alignment:
Q  150 cggttatggtgcgtaagaagatccttatgcaccgtgcataaatcc 194  Q
    |||||||||||| |||| | ||||||||||||| |||||||||||    
T  23544 cggttatggtgcataaggaaatccttatgcaccctgcataaatcc 23588  T

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Target: scaffold0194 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 28725 - 28673
Alignment:
Q  144 cgggatcggttatggtgcgtaagaagatccttatgcaccgtgcataaatccca 196  Q
    ||||| |||||||||||| |||| | |||||| |||||||||| |||||||||    
T  28725 cgggagcggttatggtgcataaggaaatccttttgcaccgtgcttaaatccca 28673  T

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