View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15515_high_9 (Length: 238)

Name: NF15515_high_9
Description: NF15515
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15515_high_9
NF15515_high_9
[»] chr7 (36 HSPs)
chr7 (30-134)||(5689196-5689300)
chr7 (136-182)||(6455561-6455607)
chr7 (136-180)||(31813423-31813467)
chr7 (136-182)||(28306327-28306373)
chr7 (138-185)||(41872130-41872177)
chr7 (136-182)||(8447799-8447845)
chr7 (136-182)||(11002398-11002444)
chr7 (136-185)||(9555339-9555388)
chr7 (136-185)||(10095731-10095780)
chr7 (136-185)||(32490601-32490650)
chr7 (136-180)||(7701200-7701244)
chr7 (136-180)||(21886479-21886523)
chr7 (138-185)||(5689355-5689402)
chr7 (138-185)||(6455628-6455675)
chr7 (136-187)||(23797360-23797411)
chr7 (145-180)||(30138872-30138907)
chr7 (138-185)||(44416611-44416658)
chr7 (152-182)||(34275273-34275303)
chr7 (136-185)||(2943224-2943273)
chr7 (136-185)||(7295135-7295184)
chr7 (138-179)||(24935906-24935947)
chr7 (136-185)||(25245222-25245271)
chr7 (137-170)||(26385638-26385671)
chr7 (138-179)||(35216490-35216531)
chr7 (136-176)||(3882819-3882859)
chr7 (136-180)||(5950278-5950322)
chr7 (136-168)||(9930400-9930432)
chr7 (136-180)||(23818436-23818480)
chr7 (136-176)||(25814770-25814810)
chr7 (136-180)||(27330592-27330636)
chr7 (137-185)||(35641491-35641539)
chr7 (136-180)||(41404027-41404071)
chr7 (145-185)||(41508689-41508729)
chr7 (136-180)||(43130245-43130289)
chr7 (136-176)||(45002088-45002128)
chr7 (136-180)||(46022632-46022676)
[»] chr8 (30 HSPs)
chr8 (136-182)||(27518397-27518443)
chr8 (138-185)||(11295743-11295790)
chr8 (136-182)||(13496517-13496563)
chr8 (136-180)||(3444634-3444678)
chr8 (136-180)||(10117054-10117098)
chr8 (139-182)||(1662659-1662702)
chr8 (139-182)||(1744305-1744348)
chr8 (136-185)||(11335579-11335628)
chr8 (145-182)||(38949050-38949087)
chr8 (136-180)||(2296486-2296530)
chr8 (136-180)||(41753842-41753886)
chr8 (136-180)||(45045461-45045505)
chr8 (136-187)||(92770-92821)
chr8 (136-183)||(7258666-7258713)
chr8 (146-185)||(15715375-15715414)
chr8 (136-179)||(25267987-25268030)
chr8 (136-179)||(36648653-36648696)
chr8 (152-182)||(31810362-31810392)
chr8 (138-180)||(31810418-31810460)
chr8 (136-185)||(5888348-5888397)
chr8 (136-185)||(7484696-7484745)
chr8 (136-185)||(10934682-10934731)
chr8 (136-185)||(13080167-13080216)
chr8 (136-185)||(27502913-27502962)
chr8 (136-177)||(33070252-33070293)
chr8 (138-186)||(1739643-1739691)
chr8 (136-180)||(24287797-24287841)
chr8 (136-168)||(24471273-24471305)
chr8 (138-182)||(31505052-31505096)
chr8 (136-180)||(40640362-40640406)
[»] chr4 (38 HSPs)
chr4 (136-182)||(54713110-54713156)
chr4 (136-182)||(14450969-14451015)
chr4 (136-182)||(49481892-49481938)
chr4 (136-176)||(12672459-12672499)
chr4 (136-180)||(27537068-27537112)
chr4 (136-180)||(34616227-34616271)
chr4 (136-176)||(38716396-38716436)
chr4 (136-180)||(39160898-39160942)
chr4 (138-180)||(20294515-20294557)
chr4 (136-182)||(23071418-23071464)
chr4 (137-179)||(40814754-40814796)
chr4 (136-177)||(16203427-16203468)
chr4 (136-185)||(38381988-38382037)
chr4 (141-182)||(48414938-48414979)
chr4 (138-183)||(56328531-56328576)
chr4 (136-180)||(2865052-2865096)
chr4 (136-180)||(35425264-35425308)
chr4 (136-180)||(36786162-36786206)
chr4 (138-185)||(14451036-14451083)
chr4 (146-185)||(34709597-34709636)
chr4 (136-179)||(34937113-34937156)
chr4 (138-180)||(3511723-3511765)
chr4 (136-182)||(41346479-41346525)
chr4 (138-183)||(7215561-7215606)
chr4 (136-177)||(16170922-16170963)
chr4 (136-177)||(18881431-18881472)
chr4 (138-187)||(21859496-21859545)
chr4 (138-187)||(21915359-21915408)
chr4 (136-185)||(25022530-25022579)
chr4 (136-185)||(52914077-52914126)
chr4 (136-177)||(53176395-53176436)
chr4 (147-183)||(18626788-18626824)
chr4 (136-180)||(21142102-21142146)
chr4 (136-180)||(23568464-23568508)
chr4 (136-180)||(47181571-47181615)
chr4 (136-180)||(47308126-47308170)
chr4 (136-180)||(48402495-48402539)
chr4 (136-180)||(56364410-56364454)
[»] chr3 (42 HSPs)
chr3 (137-182)||(3074860-3074905)
chr3 (136-182)||(38677577-38677623)
chr3 (136-185)||(48191727-48191776)
chr3 (136-180)||(34327592-34327636)
chr3 (136-182)||(336078-336124)
chr3 (136-182)||(8504862-8504908)
chr3 (138-180)||(26104788-26104830)
chr3 (136-185)||(3972480-3972529)
chr3 (136-185)||(3997349-3997398)
chr3 (136-180)||(331882-331926)
chr3 (136-180)||(10872756-10872800)
chr3 (136-180)||(12744913-12744957)
chr3 (136-180)||(21217178-21217222)
chr3 (136-180)||(23090035-23090079)
chr3 (136-179)||(20619003-20619046)
chr3 (139-185)||(3994565-3994611)
chr3 (136-185)||(9492688-9492737)
chr3 (136-185)||(12744980-12745029)
chr3 (136-185)||(22496963-22497012)
chr3 (145-182)||(26104856-26104893)
chr3 (136-185)||(27224592-27224641)
chr3 (136-185)||(40639788-40639837)
chr3 (136-185)||(54595802-54595851)
chr3 (136-185)||(54783389-54783438)
chr3 (136-180)||(7882293-7882337)
chr3 (138-182)||(8439340-8439384)
chr3 (136-180)||(9170124-9170168)
chr3 (138-182)||(12047326-12047370)
chr3 (136-180)||(14756420-14756464)
chr3 (144-180)||(23444357-23444393)
chr3 (136-180)||(24075529-24075573)
chr3 (138-182)||(25881150-25881194)
chr3 (136-180)||(29389339-29389383)
chr3 (137-185)||(37807523-37807571)
chr3 (136-180)||(37897694-37897738)
chr3 (138-178)||(40202469-40202509)
chr3 (136-180)||(43177100-43177144)
chr3 (136-180)||(50466825-50466869)
chr3 (136-176)||(51060675-51060715)
chr3 (136-180)||(52215892-52215936)
chr3 (145-185)||(52866438-52866478)
chr3 (140-172)||(52866509-52866541)
[»] scaffold0341 (2 HSPs)
scaffold0341 (136-182)||(2432-2478)
scaffold0341 (136-182)||(10087-10133)
[»] scaffold0009 (3 HSPs)
scaffold0009 (136-182)||(7739-7785)
scaffold0009 (136-180)||(146052-146096)
scaffold0009 (136-185)||(145980-146029)
[»] chr6 (19 HSPs)
chr6 (136-182)||(31398308-31398354)
chr6 (138-182)||(6560739-6560783)
chr6 (137-180)||(11746312-11746355)
chr6 (138-180)||(8146033-8146075)
chr6 (136-182)||(18097072-18097118)
chr6 (136-182)||(28555029-28555075)
chr6 (136-185)||(26527269-26527318)
chr6 (136-185)||(34170090-34170139)
chr6 (136-168)||(6894826-6894858)
chr6 (136-180)||(12383673-12383717)
chr6 (136-183)||(8449657-8449704)
chr6 (136-183)||(8458461-8458508)
chr6 (146-185)||(12349894-12349933)
chr6 (138-185)||(13277101-13277148)
chr6 (145-180)||(28554968-28555003)
chr6 (156-185)||(21980553-21980582)
chr6 (136-185)||(34379814-34379863)
chr6 (144-180)||(2827579-2827615)
chr6 (136-180)||(13281546-13281590)
[»] chr5 (34 HSPs)
chr5 (136-182)||(26141767-26141813)
chr5 (136-185)||(43438334-43438383)
chr5 (136-180)||(43482856-43482900)
chr5 (137-175)||(29177800-29177838)
chr5 (136-185)||(18652844-18652893)
chr5 (136-185)||(37067624-37067673)
chr5 (137-185)||(1100070-1100118)
chr5 (138-182)||(5259467-5259511)
chr5 (135-179)||(14153454-14153498)
chr5 (136-180)||(18033439-18033483)
chr5 (136-187)||(3100417-3100468)
chr5 (146-185)||(5089475-5089514)
chr5 (146-185)||(9742671-9742710)
chr5 (136-183)||(14153381-14153428)
chr5 (146-185)||(14274156-14274195)
chr5 (136-187)||(31963531-31963582)
chr5 (137-176)||(35032358-35032397)
chr5 (146-180)||(3100489-3100523)
chr5 (146-180)||(15058907-15058941)
chr5 (136-182)||(20518253-20518299)
chr5 (138-180)||(25773327-25773369)
chr5 (136-178)||(26045277-26045319)
chr5 (156-185)||(566325-566354)
chr5 (136-185)||(7505175-7505224)
chr5 (136-185)||(25792925-25792974)
chr5 (136-180)||(71271-71315)
chr5 (136-180)||(4082822-4082866)
chr5 (136-180)||(5984067-5984111)
chr5 (136-176)||(7329994-7330034)
chr5 (146-186)||(9245795-9245835)
chr5 (157-185)||(13359240-13359268)
chr5 (136-176)||(15549413-15549453)
chr5 (136-180)||(32398087-32398131)
chr5 (144-176)||(41814403-41814435)
[»] chr2 (33 HSPs)
chr2 (136-182)||(8740531-8740577)
chr2 (136-182)||(26234106-26234152)
chr2 (136-185)||(40187322-40187371)
chr2 (138-185)||(21488106-21488153)
chr2 (136-185)||(11726574-11726623)
chr2 (136-185)||(15119789-15119838)
chr2 (136-180)||(3098210-3098254)
chr2 (136-176)||(8383197-8383237)
chr2 (136-180)||(13882767-13882811)
chr2 (136-180)||(15119861-15119905)
chr2 (138-182)||(19612955-19612999)
chr2 (136-180)||(25270940-25270984)
chr2 (136-180)||(32630418-32630462)
chr2 (136-180)||(41056972-41057016)
chr2 (136-180)||(43732150-43732194)
chr2 (146-185)||(5094919-5094958)
chr2 (138-185)||(24457114-24457161)
chr2 (137-180)||(26003519-26003562)
chr2 (136-187)||(27331836-27331887)
chr2 (136-170)||(36001793-36001827)
chr2 (146-180)||(40669047-40669081)
chr2 (136-185)||(1961388-1961437)
chr2 (136-185)||(31024183-31024232)
chr2 (136-185)||(31102028-31102077)
chr2 (139-180)||(37182831-37182872)
chr2 (144-185)||(37182895-37182936)
chr2 (145-185)||(9431218-9431258)
chr2 (136-180)||(13333531-13333575)
chr2 (136-180)||(14022892-14022936)
chr2 (136-180)||(15859635-15859679)
chr2 (137-185)||(21183406-21183454)
chr2 (145-185)||(33052221-33052261)
chr2 (144-180)||(38465873-38465909)
[»] chr1 (29 HSPs)
chr1 (136-182)||(6508409-6508455)
chr1 (136-182)||(8338687-8338733)
chr1 (136-182)||(33939379-33939425)
chr1 (136-182)||(44349942-44349988)
chr1 (136-182)||(45115252-45115298)
chr1 (136-182)||(31698999-31699045)
chr1 (136-185)||(8466005-8466054)
chr1 (137-182)||(31889125-31889170)
chr1 (136-181)||(49586101-49586146)
chr1 (136-180)||(31998273-31998317)
chr1 (136-180)||(34953980-34954024)
chr1 (138-182)||(41161479-41161523)
chr1 (136-180)||(42761465-42761509)
chr1 (136-179)||(3549791-3549834)
chr1 (146-185)||(15998233-15998272)
chr1 (145-183)||(23575399-23575437)
chr1 (136-177)||(10832081-10832122)
chr1 (136-185)||(14967304-14967353)
chr1 (146-187)||(15311549-15311590)
chr1 (136-185)||(50550198-50550247)
chr1 (136-180)||(3013694-3013738)
chr1 (138-182)||(6283549-6283593)
chr1 (136-180)||(23398431-23398475)
chr1 (136-180)||(24981925-24981969)
chr1 (138-182)||(36040228-36040272)
chr1 (136-180)||(46412772-46412816)
chr1 (136-180)||(46906873-46906917)
chr1 (138-170)||(50878354-50878386)
chr1 (145-185)||(52183598-52183638)
[»] scaffold0020 (1 HSPs)
scaffold0020 (138-185)||(139375-139422)
[»] scaffold0065 (1 HSPs)
scaffold0065 (136-180)||(36938-36982)
[»] scaffold0050 (2 HSPs)
scaffold0050 (138-182)||(6227-6271)
scaffold0050 (145-185)||(6292-6332)
[»] scaffold0047 (1 HSPs)
scaffold0047 (146-185)||(65942-65981)
[»] scaffold0149 (1 HSPs)
scaffold0149 (136-185)||(24685-24734)
[»] scaffold0026 (1 HSPs)
scaffold0026 (136-185)||(88933-88982)
[»] scaffold1476 (1 HSPs)
scaffold1476 (136-180)||(743-787)


Alignment Details
Target: chr7 (Bit Score: 93; Significance: 2e-45; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 30 - 134
Target Start/End: Original strand, 5689196 - 5689300
Alignment:
Q  30 gtaaatattagttgttagtatgttagttgtgagaatttgaactatagactttgcaaagaaaactacactcaaattcttgattttctagttccaacggaac 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||    
T  5689196 gtaaatattagttgttagtatgttagttgtgagaatttgaactatagactttgcaaaaaaaactacaataaaattcttgattttctagttccaacggaac 5689295  T
Q  130 tacta 134  Q
    |||||    
T  5689296 tacta 5689300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 6455561 - 6455607
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||    
T  6455561 attataagcaaaaatttacattttagattcattcatttaatgatgca 6455607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 31813423 - 31813467
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  31813423 attataaacaaaaatttacattttagattcattcaattaatgatg 31813467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 28306327 - 28306373
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||    
T  28306327 attataaccaaaaatctacattttagattcattcatttaatgatgca 28306373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 185
Target Start/End: Complemental strand, 41872177 - 41872130
Alignment:
Q  138 tataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||| ||||||| ||||||||||||||||||||||||||||| ||||    
T  41872177 tataagcaaaaatctacattttagattcattcatttaatgatgtatgt 41872130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 182
Target Start/End: Complemental strand, 8447845 - 8447799
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    ||||||| ||||||| ||||||||||||||||||||| |||||||||    
T  8447845 attataagcaaaaatctacattttagattcattcattgaatgatgca 8447799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 182
Target Start/End: Complemental strand, 11002444 - 11002398
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    |||||||  |||||| |||||||||||||||||||||||||||||||    
T  11002444 attataagtaaaaatctacattttagattcattcatttaatgatgca 11002398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 9555388 - 9555339
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||||| ||||| ||||||||||||||||||||||| ||||||| ||||    
T  9555388 attataagcaaaactttacattttagattcattcattaaatgatgtatgt 9555339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 10095731 - 10095780
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||||| |||||||| |||||||||||||||||||| ||||||| ||||    
T  10095731 attataagcaaaaattaacattttagattcattcattaaatgatgtatgt 10095780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 32490601 - 32490650
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||||||||||| ||||||||||||||||||| | ||||||||| ||||    
T  32490601 attataaacaaaactttacattttagattcatttaattaatgatgtatgt 32490650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 7701200 - 7701244
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| ||||||| ||||||||||||||||||||| |||||||    
T  7701200 attataagcaaaaatctacattttagattcattcattaaatgatg 7701244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 21886479 - 21886523
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| |||||||||| |||||||||||||||| |||||||||    
T  21886479 attataagcaaaaatttatattttagattcattcaattaatgatg 21886523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 185
Target Start/End: Complemental strand, 5689402 - 5689355
Alignment:
Q  138 tataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    |||||||||||| ||| ||||||| |||||||||||||||||| ||||    
T  5689402 tataaacaaaaaattatattttaggttcattcatttaatgatgtatgt 5689355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 185
Target Start/End: Complemental strand, 6455675 - 6455628
Alignment:
Q  138 tataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||| ||||||| |||||||||| |||||||||||||||||| ||||    
T  6455675 tataagcaaaaatctacattttaggttcattcatttaatgatgtatgt 6455628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 187
Target Start/End: Original strand, 23797360 - 23797411
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgtag 187  Q
    ||||||| ||||| ||| ||||||||||||||||||| ||||||| ||||||    
T  23797360 attataagcaaaattttgcattttagattcattcattaaatgatgtatgtag 23797411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 180
Target Start/End: Complemental strand, 30138907 - 30138872
Alignment:
Q  145 aaaaatttacattttagattcattcatttaatgatg 180  Q
    |||||||||||||||||||||||||| |||||||||    
T  30138907 aaaaatttacattttagattcattcaattaatgatg 30138872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 185
Target Start/End: Complemental strand, 44416658 - 44416611
Alignment:
Q  138 tataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    |||||||||||||||| |||||||||||||||| ||||| ||| ||||    
T  44416658 tataaacaaaaatttatattttagattcattcaattaattatgtatgt 44416611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 182
Target Start/End: Complemental strand, 34275303 - 34275273
Alignment:
Q  152 tacattttagattcattcatttaatgatgca 182  Q
    |||||||||||||||||||||||||||||||    
T  34275303 tacattttagattcattcatttaatgatgca 34275273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 2943224 - 2943273
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||||| |||||||  |||||||||||||||||||| ||||||| ||||    
T  2943224 attataagcaaaaatcaacattttagattcattcattaaatgatgtatgt 2943273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 7295184 - 7295135
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    |||||||||||||||| |||||||| ||||||| ||| ||||||| ||||    
T  7295184 attataaacaaaaattaacattttacattcatttattaaatgatgtatgt 7295135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 179
Target Start/End: Original strand, 24935906 - 24935947
Alignment:
Q  138 tataaacaaaaatttacattttagattcattcatttaatgat 179  Q
    ||||| ||||||| |||||||||| |||||||||||||||||    
T  24935906 tataagcaaaaatctacattttaggttcattcatttaatgat 24935947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 25245271 - 25245222
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||||| |||||||  |||||||||||||||||||| ||||||| ||||    
T  25245271 attataagcaaaaatcaacattttagattcattcattaaatgatgtatgt 25245222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 170
Target Start/End: Original strand, 26385638 - 26385671
Alignment:
Q  137 ttataaacaaaaatttacattttagattcattca 170  Q
    ||||||||||| ||||||||||||||||||||||    
T  26385638 ttataaacaaagatttacattttagattcattca 26385671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 179
Target Start/End: Original strand, 35216490 - 35216531
Alignment:
Q  138 tataaacaaaaatttacattttagattcattcatttaatgat 179  Q
    |||||||||||||||| |||||||||||||||| | ||||||    
T  35216490 tataaacaaaaatttatattttagattcattcaataaatgat 35216531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 3882819 - 3882859
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaat 176  Q
    |||||||||||||||| | |||||||||||||||| |||||    
T  3882819 attataaacaaaaattaatattttagattcattcaattaat 3882859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 5950322 - 5950278
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| |||||| | |||||||||||||||||||| |||||||    
T  5950322 attataagcaaaaactaacattttagattcattcattaaatgatg 5950278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 168
Target Start/End: Original strand, 9930400 - 9930432
Alignment:
Q  136 attataaacaaaaatttacattttagattcatt 168  Q
    |||||||||||||||||| ||||||||||||||    
T  9930400 attataaacaaaaatttatattttagattcatt 9930432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 23818436 - 23818480
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| |||||||  |||||||||||||||||||| |||||||    
T  23818436 attataagcaaaaatcaacattttagattcattcattaaatgatg 23818480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 176
Target Start/End: Complemental strand, 25814810 - 25814770
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaat 176  Q
    ||||||||||||| | ||||||||||||| |||||||||||    
T  25814810 attataaacaaaactctacattttagatttattcatttaat 25814770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 27330636 - 27330592
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    |||||| ||||||||| | |||||||||||||||||| |||||||    
T  27330636 attatacacaaaaattaatattttagattcattcattaaatgatg 27330592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 185
Target Start/End: Original strand, 35641491 - 35641539
Alignment:
Q  137 ttataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||||||||||||||| |||||| ||||||||| | ||||||| ||||    
T  35641491 ttataaacaaaaatttatattttacattcattcaataaatgatgtatgt 35641539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 41404027 - 41404071
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| ||||||||  ||||||||||||||||||| |||||||    
T  41404027 attataagcaaaaattatcattttagattcattcattaaatgatg 41404071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 185
Target Start/End: Complemental strand, 41508729 - 41508689
Alignment:
Q  145 aaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||||| || ||||||||||||||||||||||||| ||||    
T  41508729 aaaaattgactttttagattcattcatttaatgatgtatgt 41508689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 43130245 - 43130289
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    |||||||| |||||| ||| ||||||||||||||| |||||||||    
T  43130245 attataaataaaaatctacgttttagattcattcaattaatgatg 43130289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 45002088 - 45002128
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaat 176  Q
    ||||||||||||| ||||||||||| ||||||||| |||||    
T  45002088 attataaacaaaactttacattttaaattcattcaattaat 45002128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 46022676 - 46022632
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    |||||||  |||||| ||||||||||||||||||||| |||||||    
T  46022676 attataagaaaaaatctacattttagattcattcattaaatgatg 46022632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 182
Target Start/End: Complemental strand, 27518443 - 27518397
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  27518443 attataaacaaaaatctacattttagattcattcatttaatgatgca 27518397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 185
Target Start/End: Complemental strand, 11295790 - 11295743
Alignment:
Q  138 tataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||    
T  11295790 tataaacaaaaattaacattttagattcattcattaaatgatgcatgt 11295743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 182
Target Start/End: Complemental strand, 13496563 - 13496517
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||    
T  13496563 attataagcaaaaatttacattttaaattcattcatttaatgatgca 13496517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 3444634 - 3444678
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||    
T  3444634 attataaacaaaaatttacattttatattcattcaattaatgatg 3444678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 10117098 - 10117054
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||    
T  10117098 attataagcaaaaatttacattttagattcattcaattaatgatg 10117054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 182
Target Start/End: Complemental strand, 1662702 - 1662659
Alignment:
Q  139 ataaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    |||| ||||||| |||||||||||||||||||||||||||||||    
T  1662702 ataagcaaaaatatacattttagattcattcatttaatgatgca 1662659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 182
Target Start/End: Complemental strand, 1744348 - 1744305
Alignment:
Q  139 ataaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    |||| ||||||| |||||||||||||||||||||||||||||||    
T  1744348 ataagcaaaaatatacattttagattcattcatttaatgatgca 1744305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 11335579 - 11335628
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||||| ||||| ||||||||||||||||||||||| ||||||| ||||    
T  11335579 attataagcaaaactttacattttagattcattcattaaatgatgtatgt 11335628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 182
Target Start/End: Complemental strand, 38949087 - 38949050
Alignment:
Q  145 aaaaatttacattttagattcattcatttaatgatgca 182  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  38949087 aaaaaattacattttagattcattcatttaatgatgca 38949050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 2296486 - 2296530
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| ||||| ||||||||||||||||||||||| |||||||    
T  2296486 attataagcaaaattttacattttagattcattcattaaatgatg 2296530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 41753886 - 41753842
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    |||||||||||||||| | |||||||||||||||| |||||||||    
T  41753886 attataaacaaaaattaatattttagattcattcaattaatgatg 41753842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 45045505 - 45045461
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||||||||||| || |||||||||||||||| |||||||||    
T  45045505 attataaacaaaaatctatattttagattcattcaattaatgatg 45045461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 187
Target Start/End: Original strand, 92770 - 92821
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgtag 187  Q
    |||||||||||||||  ||| |||||||||||||||||||| ||| ||||||    
T  92770 attataaacaaaaatcaacaatttagattcattcatttaataatgtatgtag 92821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 7258713 - 7258666
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcat 183  Q
    |||||||  |||| ||||||||||||||||||||| ||||||||||||    
T  7258713 attataagtaaaattttacattttagattcattcaattaatgatgcat 7258666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 185
Target Start/End: Original strand, 15715375 - 15715414
Alignment:
Q  146 aaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  15715375 aaaatttactttttagattcattcatttaatgatgtatgt 15715414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 25267987 - 25268030
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgat 179  Q
    ||||||||||||||| ||||||||||||||||| | ||||||||    
T  25267987 attataaacaaaaatctacattttagattcatttaattaatgat 25268030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 179
Target Start/End: Complemental strand, 36648696 - 36648653
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgat 179  Q
    |||||||||||||| |||||||||||||| ||||||| ||||||    
T  36648696 attataaacaaaaaattacattttagatttattcattaaatgat 36648653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 182
Target Start/End: Original strand, 31810362 - 31810392
Alignment:
Q  152 tacattttagattcattcatttaatgatgca 182  Q
    |||||||||||||||||||||||||||||||    
T  31810362 tacattttagattcattcatttaatgatgca 31810392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 180
Target Start/End: Complemental strand, 31810460 - 31810418
Alignment:
Q  138 tataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||| ||||||  |||||||||||||||||||||||||||||    
T  31810460 tataagcaaaaaactacattttagattcattcatttaatgatg 31810418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 5888348 - 5888397
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||||| |||||||| || ||||||||||||||||| ||||||| ||||    
T  5888348 attataagcaaaaattaacgttttagattcattcattaaatgatgtatgt 5888397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 7484745 - 7484696
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||||| |||||||  |||||||||||||||||||| ||||||| ||||    
T  7484745 attataagcaaaaatcaacattttagattcattcattaaatgatgtatgt 7484696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 10934731 - 10934682
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||||| |||||||  |||||||||||||||||||| ||||||| ||||    
T  10934731 attataagcaaaaatcaacattttagattcattcattaaatgatgtatgt 10934682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 13080216 - 13080167
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||||||||||||| ||||||||| ||||||| | ||||||||| ||||    
T  13080216 attataaacaaaaatctacattttacattcattgaattaatgatgtatgt 13080167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 27502913 - 27502962
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||||| |||||||| |||||||| ||||||||||| ||||||| ||||    
T  27502913 attataagcaaaaattaacattttaaattcattcattaaatgatgtatgt 27502962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 33070293 - 33070252
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatg 177  Q
    ||||||| ||||| ||| ||||||||||||||||||||||||    
T  33070293 attataagcaaaattttgcattttagattcattcatttaatg 33070252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 186
Target Start/End: Complemental strand, 1739691 - 1739643
Alignment:
Q  138 tataaacaaaaatttacattttagattcattcatttaatgatgcatgta 186  Q
    ||||| ||||||||||| |||||||| |||||| ||||||||| |||||    
T  1739691 tataagcaaaaatttactttttagatacattcaattaatgatgtatgta 1739643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 24287797 - 24287841
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| ||||| ||| ||||||||||||||||||| |||||||    
T  24287797 attataagcaaaactttgcattttagattcattcattaaatgatg 24287841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 168
Target Start/End: Complemental strand, 24471305 - 24471273
Alignment:
Q  136 attataaacaaaaatttacattttagattcatt 168  Q
    |||||||||||||||| ||||||||||||||||    
T  24471305 attataaacaaaaattaacattttagattcatt 24471273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 31505052 - 31505096
Alignment:
Q  138 tataaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    ||||| ||||||  |||||||||| ||||||||||||||||||||    
T  31505052 tataagcaaaaaactacattttaggttcattcatttaatgatgca 31505096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 40640406 - 40640362
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| ||||| ||| ||||||||||||||||| |||||||||    
T  40640406 attataagcaaaactttgcattttagattcattcaattaatgatg 40640362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 54713110 - 54713156
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||    
T  54713110 attataagcaaaaatttacattttagattcattcatttaatgatgca 54713156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 14450969 - 14451015
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||    
T  14450969 attataagcaaaaatctacattttagattcattcatttaatgatgca 14451015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 49481892 - 49481938
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||    
T  49481892 attataagcaaaagtttacattttagattcattcatttaatgatgca 49481938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 12672459 - 12672499
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaat 176  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  12672459 attataaacaaaaatttacattttagattcattcaattaat 12672499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 27537068 - 27537112
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||    
T  27537068 attataagcaaaaatttacattttagattcattcattaaatgatg 27537112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 34616227 - 34616271
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||    
T  34616227 attataaacaaaaatctacattttagattcattcattaaatgatg 34616271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 136 - 176
Target Start/End: Complemental strand, 38716436 - 38716396
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaat 176  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  38716436 attataaacaaaaatttacattttagattcattcaattaat 38716396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 39160942 - 39160898
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||    
T  39160942 attataaacaaaaatctacattttagattcattcattaaatgatg 39160898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 180
Target Start/End: Complemental strand, 20294557 - 20294515
Alignment:
Q  138 tataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||| |||||||||||||||||| ||||||||||||||||||    
T  20294557 tataagcaaaaatttacattttaggttcattcatttaatgatg 20294515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 23071418 - 23071464
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||    
T  23071418 attataagtaaaaatttatattttagattcattcatttaatgatgca 23071464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 179
Target Start/End: Complemental strand, 40814796 - 40814754
Alignment:
Q  137 ttataaacaaaaatttacattttagattcattcatttaatgat 179  Q
    ||||||||||||||| |||||||||||||||||||| ||||||    
T  40814796 ttataaacaaaaattaacattttagattcattcattaaatgat 40814754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 16203468 - 16203427
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatg 177  Q
    ||||||||||||||||||||||||||||| ||| ||||||||    
T  16203468 attataaacaaaaatttacattttagatttatttatttaatg 16203427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 38381988 - 38382037
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||||| ||||||||||||||||||||||||| ||| ||||||| ||||    
T  38381988 attataagcaaaaatttacattttagattcattgattaaatgatgtatgt 38382037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 182
Target Start/End: Complemental strand, 48414979 - 48414938
Alignment:
Q  141 aaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    |||||||||| ||||||||||||| |||||||||||||||||    
T  48414979 aaacaaaaatctacattttagatttattcatttaatgatgca 48414938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 183
Target Start/End: Complemental strand, 56328576 - 56328531
Alignment:
Q  138 tataaacaaaaatttacattttagattcattcatttaatgatgcat 183  Q
    ||||| ||||||  ||||||||||||||||||||||||||||||||    
T  56328576 tataagcaaaaaactacattttagattcattcatttaatgatgcat 56328531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 2865096 - 2865052
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    |||||||||||||||| |||||||||||| ||||||| |||||||    
T  2865096 attataaacaaaaattaacattttagattaattcattaaatgatg 2865052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 35425264 - 35425308
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| ||||| |||| ||||||||||||||||||||||||||    
T  35425264 attataagcaaaactttaaattttagattcattcatttaatgatg 35425308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 36786162 - 36786206
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    |||||||||||||||  |||||||||||||||||| |||||||||    
T  36786162 attataaacaaaaatcaacattttagattcattcaattaatgatg 36786206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 185
Target Start/End: Complemental strand, 14451083 - 14451036
Alignment:
Q  138 tataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||| |||||||||||||||||| ||||||| |||||||||| ||||    
T  14451083 tataagcaaaaatttacattttaggttcattcgtttaatgatgtatgt 14451036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 185
Target Start/End: Original strand, 34709597 - 34709636
Alignment:
Q  146 aaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  34709597 aaaatttactttttagattcattcatttaatgatgtatgt 34709636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 34937113 - 34937156
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgat 179  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||    
T  34937113 attataaacaaaaatttacattttatattcattcaataaatgat 34937156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 180
Target Start/End: Original strand, 3511723 - 3511765
Alignment:
Q  138 tataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||| ||||| ||||||||||||||||||||| |||||||||    
T  3511723 tataagcaaaactttacattttagattcattcaattaatgatg 3511765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 41346479 - 41346525
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    |||||||  ||||||||| |||||||||||||| |||||||||||||    
T  41346479 attataagtaaaaatttatattttagattcatttatttaatgatgca 41346525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 183
Target Start/End: Complemental strand, 7215606 - 7215561
Alignment:
Q  138 tataaacaaaaatttacattttagattcattcatttaatgatgcat 183  Q
    |||||||||||||||| |||||| |||| |||| ||||||||||||    
T  7215606 tataaacaaaaatttatattttaaattcgttcaattaatgatgcat 7215561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 16170922 - 16170963
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatg 177  Q
    |||||||| |||| ||||||||||||||||||||| ||||||    
T  16170922 attataaaaaaaactttacattttagattcattcaattaatg 16170963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 18881472 - 18881431
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatg 177  Q
    ||||||| ||||||| ||||||||||||||||||| ||||||    
T  18881472 attataaccaaaaatatacattttagattcattcaattaatg 18881431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 187
Target Start/End: Original strand, 21859496 - 21859545
Alignment:
Q  138 tataaacaaaaatttacattttagattcattcatttaatgatgcatgtag 187  Q
    |||||||||||||||   ||||||||||||||||| ||||||| ||||||    
T  21859496 tataaacaaaaatttgatttttagattcattcattaaatgatgtatgtag 21859545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 187
Target Start/End: Original strand, 21915359 - 21915408
Alignment:
Q  138 tataaacaaaaatttacattttagattcattcatttaatgatgcatgtag 187  Q
    |||||||||||||||   ||||||||||||||||| ||||||| ||||||    
T  21915359 tataaacaaaaatttgatttttagattcattcattaaatgatgtatgtag 21915408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 25022530 - 25022579
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    |||||||||| ||||| |||||||| ||||||||||| ||||||| ||||    
T  25022530 attataaacacaaattaacattttacattcattcattaaatgatgtatgt 25022579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 52914126 - 52914077
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||||| |||||||| | |||||||||||||||||| ||||||| ||||    
T  52914126 attataagcaaaaattaatattttagattcattcattaaatgatgtatgt 52914077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 53176436 - 53176395
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatg 177  Q
    ||||||| |||||||||| |||||||||||||||| ||||||    
T  53176436 attataagcaaaaatttatattttagattcattcagttaatg 53176395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 183
Target Start/End: Complemental strand, 18626824 - 18626788
Alignment:
Q  147 aaatttacattttagattcattcatttaatgatgcat 183  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  18626824 aaatttacattttagatttattcaattaatgatgcat 18626788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 21142102 - 21142146
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    |||||||||||||||  ||||||||||||||| |||| |||||||    
T  21142102 attataaacaaaaatcaacattttagattcatgcattaaatgatg 21142146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 23568508 - 23568464
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| |||||| | |||||||||||||||||||| |||||||    
T  23568508 attataagcaaaaactaacattttagattcattcattaaatgatg 23568464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 47181571 - 47181615
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| ||||||| ||||||||| ||||||||||| |||||||    
T  47181571 attataagcaaaaatctacattttaaattcattcattaaatgatg 47181615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 47308126 - 47308170
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| |||||||  ||||||| ||||||||||||||||||||    
T  47308126 attataagcaaaaatcaacattttggattcattcatttaatgatg 47308170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 48402539 - 48402495
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| ||||||| || |||||||||||||||||| |||||||    
T  48402539 attataagcaaaaatctatattttagattcattcattaaatgatg 48402495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 56364454 - 56364410
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    |||||||  |||||| ||||||||||||||||||||| |||||||    
T  56364454 attataagtaaaaatctacattttagattcattcattaaatgatg 56364410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 137 - 182
Target Start/End: Complemental strand, 3074905 - 3074860
Alignment:
Q  137 ttataaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  3074905 ttataagcaaaaatttacattttagattcattcatttaatgatgca 3074860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 38677577 - 38677623
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||    
T  38677577 attataagcaaaagtttacattttagattcattcatttaatgatgca 38677623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 48191727 - 48191776
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    |||||||||||||||| |||||||||||||||||||| ||||||| ||||    
T  48191727 attataaacaaaaattaacattttagattcattcattaaatgatgtatgt 48191776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 34327636 - 34327592
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    |||||||||||||||| |||||||||||||||||||| |||||||    
T  34327636 attataaacaaaaattaacattttagattcattcattaaatgatg 34327592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 336078 - 336124
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    |||||||  |||| |||||||||||||||||||||||||||||||||    
T  336078 attataagtaaaagtttacattttagattcattcatttaatgatgca 336124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 8504862 - 8504908
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    ||||||| ||||||| ||||||||||||||||||||||| |||||||    
T  8504862 attataagcaaaaatctacattttagattcattcatttattgatgca 8504908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 180
Target Start/End: Original strand, 26104788 - 26104830
Alignment:
Q  138 tataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||| |||||||||||||||||| ||||||||||||||||||    
T  26104788 tataagcaaaaatttacattttaggttcattcatttaatgatg 26104830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 3972480 - 3972529
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    |||||||| |||||| ||||||||||||||||||| ||||||||| ||||    
T  3972480 attataaataaaaatctacattttagattcattcaattaatgatgtatgt 3972529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 3997398 - 3997349
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    |||||||| |||||| ||||||||||||||||||| ||||||||| ||||    
T  3997398 attataaataaaaatctacattttagattcattcaattaatgatgtatgt 3997349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 331926 - 331882
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| |||||||| |||||||||||||||||||| |||||||    
T  331926 attataagcaaaaattaacattttagattcattcattaaatgatg 331882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 10872800 - 10872756
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| |||||||||| |||||||||||||||| |||||||||    
T  10872800 attataagcaaaaatttatattttagattcattcaattaatgatg 10872756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 12744913 - 12744957
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| |||||| |||||||||||||||||||| |||||||||    
T  12744913 attataagcaaaaacttacattttagattcattcaattaatgatg 12744957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 21217178 - 21217222
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| ||||||| ||||||||||||||||||||| |||||||    
T  21217178 attataagcaaaaatctacattttagattcattcattaaatgatg 21217222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 23090079 - 23090035
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||||||||||| ||||| ||||||||||||| |||||||||    
T  23090079 attataaacaaaaatatacatgttagattcattcaattaatgatg 23090035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 20619003 - 20619046
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgat 179  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||    
T  20619003 attataaacaaaaatttacattttgcattcattcaattaatgat 20619046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 185
Target Start/End: Complemental strand, 3994611 - 3994565
Alignment:
Q  139 ataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||| |||||| ||||||||||||||||||| ||||||||| ||||    
T  3994611 ataaataaaaatctacattttagattcattcaattaatgatgtatgt 3994565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 9492688 - 9492737
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||||||||||||||||||||||||||| ||| | ||||| ||| ||||    
T  9492688 attataaacaaaaatttacattttagatttatttaattaattatgtatgt 9492737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 12745029 - 12744980
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||||| |||||||| ||||||||||| |||||||| ||||||| ||||    
T  12745029 attataagcaaaaattaacattttagatacattcattaaatgatgtatgt 12744980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 22496963 - 22497012
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||||| |||||||| | |||||||||||||||||| ||||||| ||||    
T  22496963 attataagcaaaaattaatattttagattcattcattaaatgatgtatgt 22497012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 182
Target Start/End: Complemental strand, 26104893 - 26104856
Alignment:
Q  145 aaaaatttacattttagattcattcatttaatgatgca 182  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  26104893 aaaaatttacattttaagttcattcatttaatgatgca 26104856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 27224592 - 27224641
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    |||||||||||||||  |||||||||||| ||||||| ||||||| ||||    
T  27224592 attataaacaaaaatcaacattttagatttattcattaaatgatgtatgt 27224641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 40639837 - 40639788
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||||| |||||||| |||||||| ||||||||||| ||||||| ||||    
T  40639837 attataagcaaaaattaacattttaaattcattcattaaatgatgtatgt 40639788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 54595802 - 54595851
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||||| |||||||  |||||||||||||||||||| ||||||| ||||    
T  54595802 attataagcaaaaatcaacattttagattcattcattaaatgatgtatgt 54595851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 54783389 - 54783438
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    |||||||||||||||| |||||||||||||||| ||| | ||||| ||||    
T  54783389 attataaacaaaaattaacattttagattcattaattaattgatgtatgt 54783438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 7882293 - 7882337
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| |||||||| |||||||||||||||| ||| |||||||    
T  7882293 attataagcaaaaattaacattttagattcattaattaaatgatg 7882337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Complemental strand, 8439384 - 8439340
Alignment:
Q  138 tataaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    ||||| |||||| ||| ||||||| ||||||||||||||||||||    
T  8439384 tataagcaaaaaattatattttaggttcattcatttaatgatgca 8439340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 9170124 - 9170168
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| |||||| ||||||||||||||||||| || |||||||    
T  9170124 attataagcaaaaaattacattttagattcattcgttaaatgatg 9170168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Complemental strand, 12047370 - 12047326
Alignment:
Q  138 tataaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    ||||| |||||  |||||||||||||| |||||||||||||||||    
T  12047370 tataagcaaaagattacattttagatttattcatttaatgatgca 12047326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 14756420 - 14756464
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    |||||||  |||| ||||||||||||||| |||||||||||||||    
T  14756420 attataagtaaaattttacattttagatttattcatttaatgatg 14756464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 23444393 - 23444357
Alignment:
Q  144 caaaaatttacattttagattcattcatttaatgatg 180  Q
    |||||||| |||||||||||||||||||| |||||||    
T  23444393 caaaaattaacattttagattcattcattaaatgatg 23444357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 24075573 - 24075529
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| ||||||| ||||||||||||||||||| || ||||||    
T  24075573 attataagcaaaaatctacattttagattcattcaattcatgatg 24075529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 25881150 - 25881194
Alignment:
Q  138 tataaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    ||||| ||||||  |||||||||| ||||||||||||||||||||    
T  25881150 tataagcaaaaaactacattttaggttcattcatttaatgatgca 25881194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 29389339 - 29389383
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| |||||||||| ||||||||||| |||| |||||||||    
T  29389339 attataagcaaaaatttatattttagattcgttcaattaatgatg 29389383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 185
Target Start/End: Original strand, 37807523 - 37807571
Alignment:
Q  137 ttataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||||||||||||| |||||||| ||| ||||||| ||||||| ||||    
T  37807523 ttataaacaaaaattaacattttaaatttattcattgaatgatgtatgt 37807571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 37897694 - 37897738
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| ||||||| || |||||||||||||||| |||||||||    
T  37897694 attataagcaaaaatctaaattttagattcattcaattaatgatg 37897738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 40202509 - 40202469
Alignment:
Q  138 tataaacaaaaatttacattttagattcattcatttaatga 178  Q
    |||||||||||||| ||||||||||||| |||||| |||||    
T  40202509 tataaacaaaaattaacattttagattctttcattaaatga 40202469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 43177100 - 43177144
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||||||||||| ||||||||| ||||||| | |||||||||    
T  43177100 attataaacaaaaatctacattttaaattcatttaattaatgatg 43177144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 50466825 - 50466869
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    |||||||  ||||||||| |||||||||||||||| |||||||||    
T  50466825 attataagtaaaaatttatattttagattcattcaattaatgatg 50466869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 51060675 - 51060715
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaat 176  Q
    ||||||| ||||||||||||||||||||| ||||| |||||    
T  51060675 attataagcaaaaatttacattttagattaattcaattaat 51060715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 52215892 - 52215936
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| |||||||||||||||||||||||| || || ||||||    
T  52215892 attataagcaaaaatttacattttagattcatgcaattgatgatg 52215936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 185
Target Start/End: Original strand, 52866438 - 52866478
Alignment:
Q  145 aaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||||| |||||||||||||||||||| ||||||| ||||    
T  52866438 aaaaattaacattttagattcattcattaaatgatgtatgt 52866478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 172
Target Start/End: Complemental strand, 52866541 - 52866509
Alignment:
Q  140 taaacaaaaatttacattttagattcattcatt 172  Q
    |||||||||||| ||||||||||||||||||||    
T  52866541 taaacaaaaattaacattttagattcattcatt 52866509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 2432 - 2478
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||    
T  2432 attataagcaaaaatttacatcttagattcattcatttaatgatgca 2478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 10087 - 10133
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||    
T  10087 attataagcaaaaatttacatcttagattcattcatttaatgatgca 10133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 182
Target Start/End: Complemental strand, 7785 - 7739
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||    
T  7785 attataagcaaaaatctacattttagattcattcatttaatgatgca 7739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 146096 - 146052
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||    
T  146096 attataaacaaaaatttgcattttagattcattcaattaatgatg 146052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 145980 - 146029
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    |||||||||||||||   ||||||||||||||||||| ||||||| ||||    
T  145980 attataaacaaaaatcatcattttagattcattcattaaatgatgtatgt 146029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 182
Target Start/End: Complemental strand, 31398354 - 31398308
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||    
T  31398354 attataagcaaaagtttacattttagattcattcatttaatgatgca 31398308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 182
Target Start/End: Complemental strand, 6560783 - 6560739
Alignment:
Q  138 tataaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||    
T  6560783 tataagcaaaaaattacattttagattcattcatttaatgatgca 6560739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 11746355 - 11746312
Alignment:
Q  137 ttataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| |||||||||||||||||||||||||| |||||||||    
T  11746355 ttataaaaaaaaatttacattttagattcattcaattaatgatg 11746312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 180
Target Start/End: Complemental strand, 8146075 - 8146033
Alignment:
Q  138 tataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  8146075 tataagcaaaaaattacattttagattcattcatttaatgatg 8146033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 18097072 - 18097118
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    ||||||| ||||| ||||||||||||||||||| |||||||||||||    
T  18097072 attataagcaaaagtttacattttagattcatttatttaatgatgca 18097118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 182
Target Start/End: Complemental strand, 28555075 - 28555029
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    ||||||| ||||||| ||||||||||||||||| |||||||||||||    
T  28555075 attataagcaaaaatctacattttagattcatttatttaatgatgca 28555029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 26527318 - 26527269
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||||| |||||||| |||||||||||||||||||| ||||||| ||||    
T  26527318 attataagcaaaaattaacattttagattcattcattaaatgatgtatgt 26527269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 34170090 - 34170139
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    |||||||||||||||  |||||||||||||||||||| ||||||| ||||    
T  34170090 attataaacaaaaatcaacattttagattcattcattaaatgatgtatgt 34170139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 168
Target Start/End: Original strand, 6894826 - 6894858
Alignment:
Q  136 attataaacaaaaatttacattttagattcatt 168  Q
    |||||||||||||||||||||||||||||||||    
T  6894826 attataaacaaaaatttacattttagattcatt 6894858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 12383717 - 12383673
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||||||||||| ||||||||||||| ||||| |||||||||    
T  12383717 attataaacaaaaatctacattttagattaattcaattaatgatg 12383673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 8449704 - 8449657
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcat 183  Q
    ||||||| |||||||| | |||||||||||||||| ||||||||||||    
T  8449704 attataagcaaaaattaatattttagattcattcaattaatgatgcat 8449657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 8458508 - 8458461
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcat 183  Q
    ||||||| |||||||| | |||||||||||||||| ||||||||||||    
T  8458508 attataagcaaaaattaatattttagattcattcaattaatgatgcat 8458461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 185
Target Start/End: Complemental strand, 12349933 - 12349894
Alignment:
Q  146 aaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  12349933 aaaatttactttttagattcattcatttaatgatgtatgt 12349894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 185
Target Start/End: Complemental strand, 13277148 - 13277101
Alignment:
Q  138 tataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    |||||||||||||||| |||||||||||||||| | ||||||| ||||    
T  13277148 tataaacaaaaatttatattttagattcattcaataaatgatgtatgt 13277101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 180
Target Start/End: Original strand, 28554968 - 28555003
Alignment:
Q  145 aaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||||||||||||| ||||||||||||||||||    
T  28554968 aaaaatttacattttaggttcattcatttaatgatg 28555003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 185
Target Start/End: Original strand, 21980553 - 21980582
Alignment:
Q  156 ttttagattcattcatttaatgatgcatgt 185  Q
    ||||||||||||||||||||||||||||||    
T  21980553 ttttagattcattcatttaatgatgcatgt 21980582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 34379863 - 34379814
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||||| |||||||  |||||||||||||||||||| ||||||| ||||    
T  34379863 attataagcaaaaatcaacattttagattcattcattaaatgatgtatgt 34379814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 2827579 - 2827615
Alignment:
Q  144 caaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  2827579 caaaattttacattttagattcatttatttaatgatg 2827615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 13281546 - 13281590
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| ||||||| || |||||||||||||||| |||||||||    
T  13281546 attataagcaaaaatctagattttagattcattcaattaatgatg 13281590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 26141767 - 26141813
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||    
T  26141767 attataagcaaaagtttacattttagattcattcatttaatgatgca 26141813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 43438383 - 43438334
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    |||||||||||||||| | |||||||||||||||||| ||||||||||||    
T  43438383 attataaacaaaaattaatattttagattcattcattaaatgatgcatgt 43438334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 43482900 - 43482856
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||    
T  43482900 attataaacaaaaatttacattttatatttattcatttaatgatg 43482856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 175
Target Start/End: Complemental strand, 29177838 - 29177800
Alignment:
Q  137 ttataaacaaaaatttacattttagattcattcatttaa 175  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  29177838 ttataaacaaaaatttacattttagattcattcaattaa 29177800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 18652893 - 18652844
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    |||||||||||||||  |||||||||||||||||||| ||||||| ||||    
T  18652893 attataaacaaaaatcaacattttagattcattcattaaatgatgtatgt 18652844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 37067624 - 37067673
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    |||||||||||||||| | |||||||||||||||||| ||||||| ||||    
T  37067624 attataaacaaaaattaatattttagattcattcattaaatgatgtatgt 37067673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 185
Target Start/End: Original strand, 1100070 - 1100118
Alignment:
Q  137 ttataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    |||||| ||||| ||||||||||||||||||||||| ||||||| ||||    
T  1100070 ttataagcaaaagtttacattttagattcattcattaaatgatgtatgt 1100118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 182
Target Start/End: Complemental strand, 5259511 - 5259467
Alignment:
Q  138 tataaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    ||||| ||||||  |||||||||||||||||||||||||||||||    
T  5259511 tataagcaaaaaactacattttagattcattcatttaatgatgca 5259467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 179
Target Start/End: Complemental strand, 14153498 - 14153454
Alignment:
Q  135 gattataaacaaaaatttacattttagattcattcatttaatgat 179  Q
    |||||||| |||||| ||||||||||| |||||||||||||||||    
T  14153498 gattataagcaaaaaattacattttaggttcattcatttaatgat 14153454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 18033483 - 18033439
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| ||||||| ||||||||||||| |||||||||||||||    
T  18033483 attataagcaaaaatctacattttagatttattcatttaatgatg 18033439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 187
Target Start/End: Original strand, 3100417 - 3100468
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgtag 187  Q
    ||||||| |||||||| |||||||||||||||||| | ||||||| ||||||    
T  3100417 attataagcaaaaattaacattttagattcattcaataaatgatgtatgtag 3100468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 185
Target Start/End: Original strand, 5089475 - 5089514
Alignment:
Q  146 aaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    |||||| |||||||||||||||||||||||||||| ||||    
T  5089475 aaaattcacattttagattcattcatttaatgatgaatgt 5089514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 185
Target Start/End: Original strand, 9742671 - 9742710
Alignment:
Q  146 aaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    |||||| |||||||||||||||||||||||||||| ||||    
T  9742671 aaaattgacattttagattcattcatttaatgatgtatgt 9742710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 14153381 - 14153428
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcat 183  Q
    ||||||| ||||||| ||| ||||| ||||||||||||||||||||||    
T  14153381 attataagcaaaaatctactttttatattcattcatttaatgatgcat 14153428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 185
Target Start/End: Original strand, 14274156 - 14274195
Alignment:
Q  146 aaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||||||||||||| ||||||||||||||||||| ||||    
T  14274156 aaaatttacattttaaattcattcatttaatgatgtatgt 14274195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 187
Target Start/End: Original strand, 31963531 - 31963582
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgtag 187  Q
    ||||||||||||| ||| ||||||||||||||| ||| ||||||| ||||||    
T  31963531 attataaacaaaattttgcattttagattcatttattaaatgatgtatgtag 31963582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 176
Target Start/End: Complemental strand, 35032397 - 35032358
Alignment:
Q  137 ttataaacaaaaatttacattttagattcattcatttaat 176  Q
    |||||| ||||||||||||||||||||||||||| |||||    
T  35032397 ttataagcaaaaatttacattttagattcattcaattaat 35032358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 180
Target Start/End: Complemental strand, 3100523 - 3100489
Alignment:
Q  146 aaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||||||||||||||||||||| |||||||||    
T  3100523 aaaatttacattttagattcattcaattaatgatg 3100489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 180
Target Start/End: Complemental strand, 15058941 - 15058907
Alignment:
Q  146 aaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||||||||||| |||||||||||||||||||    
T  15058941 aaaatttacattttaaattcattcatttaatgatg 15058907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 182
Target Start/End: Complemental strand, 20518299 - 20518253
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    ||||||| ||||||| ||| ||||| |||||||||||||||||||||    
T  20518299 attataagcaaaaatctactttttacattcattcatttaatgatgca 20518253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 180
Target Start/End: Complemental strand, 25773369 - 25773327
Alignment:
Q  138 tataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||||||||||||||||||| ||||| ||| |||||||||    
T  25773369 tataaacaaaaatttacattttacattcaatcaattaatgatg 25773327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 178
Target Start/End: Original strand, 26045277 - 26045319
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatga 178  Q
    ||||||| |||||||||| |||||||||||||||| |||||||    
T  26045277 attataagcaaaaatttatattttagattcattcaattaatga 26045319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 185
Target Start/End: Original strand, 566325 - 566354
Alignment:
Q  156 ttttagattcattcatttaatgatgcatgt 185  Q
    ||||||||||||||||||||||||||||||    
T  566325 ttttagattcattcatttaatgatgcatgt 566354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 7505224 - 7505175
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    |||||||||||||||  ||||||| |||||||||||| ||||||| ||||    
T  7505224 attataaacaaaaatcaacattttggattcattcattaaatgatgtatgt 7505175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 25792974 - 25792925
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||||| ||||||||||| |||||| |||||||||| ||||||| ||||    
T  25792974 attataagcaaaaatttactttttaggttcattcattaaatgatgtatgt 25792925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 71271 - 71315
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| ||||||| || |||||||||||||||| |||||||||    
T  71271 attataagcaaaaatctatattttagattcattcaattaatgatg 71315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 4082866 - 4082822
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    |||||||||||||||| |||||||||||| ||||| | |||||||    
T  4082866 attataaacaaaaattcacattttagatttattcaataaatgatg 4082822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 5984111 - 5984067
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| ||||| ||| ||||||||||||||||| |||||||||    
T  5984111 attataagcaaaactttgcattttagattcattcaattaatgatg 5984067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 7329994 - 7330034
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaat 176  Q
    ||||||| ||||| ||| |||||||||||||||||||||||    
T  7329994 attataagcaaaactttgcattttagattcattcatttaat 7330034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 186
Target Start/End: Original strand, 9245795 - 9245835
Alignment:
Q  146 aaaatttacattttagattcattcatttaatgatgcatgta 186  Q
    |||||| || ||||||||||||||||||||||||| |||||    
T  9245795 aaaattgactttttagattcattcatttaatgatgaatgta 9245835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 185
Target Start/End: Complemental strand, 13359268 - 13359240
Alignment:
Q  157 tttagattcattcatttaatgatgcatgt 185  Q
    |||||||||||||||||||||||||||||    
T  13359268 tttagattcattcatttaatgatgcatgt 13359240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 176
Target Start/End: Complemental strand, 15549453 - 15549413
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaat 176  Q
    |||||||||||||||  |||||||||||||||||| |||||    
T  15549453 attataaacaaaaatcaacattttagattcattcaattaat 15549413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 32398131 - 32398087
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||||||||||| || |||||| ||||||||| |||||||||    
T  32398131 attataaacaaaaatctatattttaaattcattcaattaatgatg 32398087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 176
Target Start/End: Original strand, 41814403 - 41814435
Alignment:
Q  144 caaaaatttacattttagattcattcatttaat 176  Q
    ||||||||||||||||||||||||||| |||||    
T  41814403 caaaaatttacattttagattcattcaattaat 41814435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 8740531 - 8740577
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||    
T  8740531 attataagcaaaaatctacattttagattcattcatttaatgatgca 8740577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 182
Target Start/End: Complemental strand, 26234152 - 26234106
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||    
T  26234152 attataagcaaaagtttacattttagattcattcatttaatgatgca 26234106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 40187371 - 40187322
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||| ||||    
T  40187371 attataaacaaaaatttacattttagattgattcagttaatgatgtatgt 40187322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 185
Target Start/End: Complemental strand, 21488153 - 21488106
Alignment:
Q  138 tataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||| |||||| |||||||||||||||||||||||||||||| ||||    
T  21488153 tataagcaaaaaattacattttagattcattcatttaatgatgtatgt 21488106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 11726623 - 11726574
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||||| |||||||| |||||||||||||||||||| ||||||| ||||    
T  11726623 attataagcaaaaattaacattttagattcattcattaaatgatgtatgt 11726574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 15119789 - 15119838
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||||| |||||||| |||||||||||||||||||| ||||||| ||||    
T  15119789 attataagcaaaaattaacattttagattcattcattaaatgatgtatgt 15119838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 3098254 - 3098210
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| ||||||| ||||||||||||||||||||| |||||||    
T  3098254 attataagcaaaaatctacattttagattcattcattaaatgatg 3098210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 8383197 - 8383237
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaat 176  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  8383197 attataaacaaaaatctatattttagattcattcatttaat 8383237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 13882811 - 13882767
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    |||||||||||||| | |||||||||||||||||||| |||||||    
T  13882811 attataaacaaaaactaacattttagattcattcattaaatgatg 13882767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 15119905 - 15119861
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| ||||||| ||||||||||||| |||||||||||||||    
T  15119905 attataagcaaaaatctacattttagatttattcatttaatgatg 15119861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 19612955 - 19612999
Alignment:
Q  138 tataaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    ||||| ||||||| || ||||||||||||||||||||||||||||    
T  19612955 tataagcaaaaatctatattttagattcattcatttaatgatgca 19612999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 25270984 - 25270940
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| ||||||| ||||||||||||||||||||| |||||||    
T  25270984 attataagcaaaaatctacattttagattcattcattaaatgatg 25270940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 32630418 - 32630462
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||||||||||| |||||||| |||||||||| |||||||||    
T  32630418 attataaacaaaaatctacattttggattcattcaattaatgatg 32630462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 41057016 - 41056972
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| ||||||| ||||||||||||||||||||| |||||||    
T  41057016 attataagcaaaaatctacattttagattcattcattaaatgatg 41056972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 43732150 - 43732194
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| ||||||| ||||||||||||||||||| |||||||||    
T  43732150 attataagcaaaaatatacattttagattcattcaattaatgatg 43732194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 185
Target Start/End: Complemental strand, 5094958 - 5094919
Alignment:
Q  146 aaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  5094958 aaaatttactttttagattcattcatttaatgatgtatgt 5094919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 185
Target Start/End: Original strand, 24457114 - 24457161
Alignment:
Q  138 tataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||| |||||| ||||||||||| |||||||||||||||||| ||||    
T  24457114 tataagcaaaaaattacattttaggttcattcatttaatgatgtatgt 24457161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 26003562 - 26003519
Alignment:
Q  137 ttataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    |||||| ||||||| ||||||||||||||||||| |||||||||    
T  26003562 ttataagcaaaaatctacattttagattcattcaattaatgatg 26003519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 187
Target Start/End: Complemental strand, 27331887 - 27331836
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgtag 187  Q
    ||||||| |||||||  |||||||||||||||||| ||||||||| ||||||    
T  27331887 attataagcaaaaatcaacattttagattcattcaattaatgatgtatgtag 27331836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 170
Target Start/End: Original strand, 36001793 - 36001827
Alignment:
Q  136 attataaacaaaaatttacattttagattcattca 170  Q
    |||||||||||||||| ||||||||||||||||||    
T  36001793 attataaacaaaaattaacattttagattcattca 36001827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 180
Target Start/End: Complemental strand, 40669081 - 40669047
Alignment:
Q  146 aaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||||| |||||||||||||||||||||||||    
T  40669081 aaaatttactttttagattcattcatttaatgatg 40669047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 1961437 - 1961388
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||||| |||||||  |||||||||||||||||||| ||||||| ||||    
T  1961437 attataagcaaaaatcaacattttagattcattcattaaatgatgtatgt 1961388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 31024183 - 31024232
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||||| |||||||  |||||||||||||||||||| ||||||| ||||    
T  31024183 attataagcaaaaatcaacattttagattcattcattaaatgatgtatgt 31024232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 31102077 - 31102028
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||||| ||||| ||| ||||||||||||||||||| ||||||| ||||    
T  31102077 attataagcaaaagtttgcattttagattcattcattaaatgatgtatgt 31102028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 180
Target Start/End: Original strand, 37182831 - 37182872
Alignment:
Q  139 ataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    |||| ||||||||||||||||||||||||| ||| |||||||    
T  37182831 ataagcaaaaatttacattttagattcattaattaaatgatg 37182872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 37182936 - 37182895
Alignment:
Q  144 caaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||||||||||||||| ||||||||||| ||||||| ||||    
T  37182936 caaaaatttacattttaaattcattcattaaatgatgtatgt 37182895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 185
Target Start/End: Original strand, 9431218 - 9431258
Alignment:
Q  145 aaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||| ||||||||||| |||||||||||||||||| ||||    
T  9431218 aaaaaattacattttaggttcattcatttaatgatgtatgt 9431258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 13333575 - 13333531
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| ||||||| ||||||||||||||||| ||| |||||||    
T  13333575 attataagcaaaaatctacattttagattcattgattaaatgatg 13333531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 14022936 - 14022892
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| |||||| | |||||||||||||||||||| |||||||    
T  14022936 attataatcaaaaactaacattttagattcattcattaaatgatg 14022892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 15859679 - 15859635
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| ||||||| || |||||||||||||||| |||||||||    
T  15859679 attataagcaaaaatctatattttagattcattcaattaatgatg 15859635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 185
Target Start/End: Complemental strand, 21183454 - 21183406
Alignment:
Q  137 ttataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    |||||| |||||||  |||||||||||||||||||| ||||||| ||||    
T  21183454 ttataagcaaaaatcaacattttagattcattcattaaatgatgtatgt 21183406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 185
Target Start/End: Complemental strand, 33052261 - 33052221
Alignment:
Q  145 aaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||||| || ||||||||||||||||||||||||| ||||    
T  33052261 aaaaattgactttttagattcattcatttaatgatgtatgt 33052221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 38465909 - 38465873
Alignment:
Q  144 caaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| ||||||||||||||||||| |||||||||    
T  38465909 caaaaatctacattttagattcattcaattaatgatg 38465873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 6508409 - 6508455
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||    
T  6508409 attataagcaaaaatttacatcttagattcattcatttaatgatgca 6508455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 8338687 - 8338733
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||    
T  8338687 attataagcaaaaatctacattttagattcattcatttaatgatgca 8338733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 182
Target Start/End: Complemental strand, 33939425 - 33939379
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||    
T  33939425 attataagcaaaagtttacattttagattcattcatttaatgatgca 33939379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 44349942 - 44349988
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||    
T  44349942 attataaacaaaagtttatattttagattcattcatttaatgatgca 44349988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 182
Target Start/End: Complemental strand, 45115298 - 45115252
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||    
T  45115298 attataagcaaaaatctacattttagattcattcatttaatgatgca 45115252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 31698999 - 31699045
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    ||||||| ||||||| |||||| ||||||||||||||||||||||||    
T  31698999 attataagcaaaaatatacattgtagattcattcatttaatgatgca 31699045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 8466054 - 8466005
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||||||||||| ||| ||||||||||||||| ||||||||||| ||||    
T  8466054 attataaacaaaactttgcattttagattcatttatttaatgatgtatgt 8466005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 182
Target Start/End: Complemental strand, 31889170 - 31889125
Alignment:
Q  137 ttataaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    |||||| ||||||||||| ||||| |||||||||||||||||||||    
T  31889170 ttataagcaaaaatttactttttacattcattcatttaatgatgca 31889125  T

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Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 49586101 - 49586146
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgc 181  Q
    ||||||| ||||| ||||||||||| ||||||||||||||||||||    
T  49586101 attataagcaaaagtttacattttaaattcattcatttaatgatgc 49586146  T

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Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 31998317 - 31998273
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| ||||| ||| |||||||||||||||||||||||||||    
T  31998317 attataagcaaaactttgcattttagattcattcatttaatgatg 31998273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 34954024 - 34953980
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| |||||||||| |||||||||||||||| |||||||||    
T  34954024 attataagcaaaaatttatattttagattcattcaattaatgatg 34953980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 41161479 - 41161523
Alignment:
Q  138 tataaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    |||||||||||| ||||||||||  ||||||||||||||||||||    
T  41161479 tataaacaaaaaattacattttaagttcattcatttaatgatgca 41161523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 42761465 - 42761509
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| ||||| ||||||||||||||||||||| |||||||||    
T  42761465 attataagcaaaactttacattttagattcattcaattaatgatg 42761509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 3549791 - 3549834
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgat 179  Q
    ||||||| ||||||| ||||||||||||||||||| ||||||||    
T  3549791 attataagcaaaaatctacattttagattcattcaattaatgat 3549834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 185
Target Start/End: Original strand, 15998233 - 15998272
Alignment:
Q  146 aaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  15998233 aaaatttactttttagattcattcatttaatgatgtatgt 15998272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 183
Target Start/End: Complemental strand, 23575437 - 23575399
Alignment:
Q  145 aaaaatttacattttagattcattcatttaatgatgcat 183  Q
    ||||| ||||||||||| |||||||||||||||||||||    
T  23575437 aaaaaattacattttaggttcattcatttaatgatgcat 23575399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 10832122 - 10832081
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatg 177  Q
    ||||||||||||||| |||||||||| |||||||| ||||||    
T  10832122 attataaacaaaaatctacattttaggttcattcaattaatg 10832081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 14967353 - 14967304
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||||| |||||||  |||||||||||||||||||| ||||||| ||||    
T  14967353 attataagcaaaaatcaacattttagattcattcattaaatgatgtatgt 14967304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 187
Target Start/End: Complemental strand, 15311590 - 15311549
Alignment:
Q  146 aaaatttacattttagattcattcatttaatgatgcatgtag 187  Q
    ||||||||| |||||| |||||||||||||||||| ||||||    
T  15311590 aaaatttactttttaggttcattcatttaatgatgtatgtag 15311549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 50550247 - 50550198
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    |||||||| ||||||  |||||||||||||||||||| ||||||| ||||    
T  50550247 attataaagaaaaatcaacattttagattcattcattaaatgatgtatgt 50550198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 3013738 - 3013694
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| |||||||| |||||||| ||||||||||| |||||||    
T  3013738 attataagcaaaaattaacattttacattcattcattaaatgatg 3013694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 6283549 - 6283593
Alignment:
Q  138 tataaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    ||||| ||||||  |||||||||| ||||||||||||||||||||    
T  6283549 tataagcaaaaaactacattttaggttcattcatttaatgatgca 6283593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 23398431 - 23398475
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| |||||| | |||||||||||||||||||| |||||||    
T  23398431 attataagcaaaaactaacattttagattcattcattaaatgatg 23398475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 24981969 - 24981925
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| |||||||  |||||||||||||||||||| |||||||    
T  24981969 attataagcaaaaatcaacattttagattcattcattaaatgatg 24981925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Complemental strand, 36040272 - 36040228
Alignment:
Q  138 tataaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    ||||| ||||||  |||||||||| ||||||||||||||||||||    
T  36040272 tataagcaaaaaactacattttaggttcattcatttaatgatgca 36040228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 46412816 - 46412772
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    |||||||  ||||||||||||||| |||||||||| |||||||||    
T  46412816 attataagtaaaaatttacattttggattcattcaattaatgatg 46412772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 46906873 - 46906917
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||| ||||||| || |||||||||||||||||| |||||||    
T  46906873 attataagcaaaaatctatattttagattcattcattaaatgatg 46906917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 170
Target Start/End: Original strand, 50878354 - 50878386
Alignment:
Q  138 tataaacaaaaatttacattttagattcattca 170  Q
    ||||||||||||||||||||||||||| |||||    
T  50878354 tataaacaaaaatttacattttagatttattca 50878386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 185
Target Start/End: Original strand, 52183598 - 52183638
Alignment:
Q  145 aaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||| ||||||||||| |||||||||||||||||| ||||    
T  52183598 aaaaaattacattttaggttcattcatttaatgatgtatgt 52183638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 185
Target Start/End: Complemental strand, 139422 - 139375
Alignment:
Q  138 tataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||| |||||| |||||||||||||||||||||||||||||| ||||    
T  139422 tataagcaaaaaattacattttagattcattcatttaatgatgtatgt 139375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 36982 - 36938
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    |||||||||||||||  |||||||||||||||||||| |||||||    
T  36982 attataaacaaaaatcaacattttagattcattcattaaatgatg 36938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 6227 - 6271
Alignment:
Q  138 tataaacaaaaatttacattttagattcattcatttaatgatgca 182  Q
    ||||| |||||| ||||||||| ||||||||||||||||||||||    
T  6227 tataagcaaaaaattacattttcgattcattcatttaatgatgca 6271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 185
Target Start/End: Complemental strand, 6332 - 6292
Alignment:
Q  145 aaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||| ||||||||||| |||||||||||||||||| ||||    
T  6332 aaaaaattacattttaggttcattcatttaatgatgtatgt 6292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 185
Target Start/End: Original strand, 65942 - 65981
Alignment:
Q  146 aaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  65942 aaaatttactttttagattcattcatttaatgatgtatgt 65981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 24734 - 24685
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||||| |||||||| | |||||||||||||||||| ||||||| ||||    
T  24734 attataagcaaaaattaatattttagattcattcattaaatgatgtatgt 24685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 88982 - 88933
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatgcatgt 185  Q
    ||||||||||||||| || |||||| ||||||||| ||||||||| ||||    
T  88982 attataaacaaaaatctatattttatattcattcaattaatgatgtatgt 88933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1476 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1476
Description:

Target: scaffold1476; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 787 - 743
Alignment:
Q  136 attataaacaaaaatttacattttagattcattcatttaatgatg 180  Q
    ||||||||| |||||| | |||||||||||||||||| |||||||    
T  787 attataaactaaaattaatattttagattcattcattaaatgatg 743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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