View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15515_low_7 (Length: 252)
Name: NF15515_low_7
Description: NF15515
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15515_low_7 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 32751693 - 32751433
Alignment:
| Q |
1 |
cagcatatccacccaattattcacaaaaagcacataaaggagaacaataactcctcatctctcaaacaaattctttgaggagttataagcacttagcacc |
100 |
Q |
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| T |
32751693 |
cagcatatccacccaattattcacaaaaagcacataaaggagaacaataactcctcatctctcagacaaattctttgaggagttataagcacttagcacc |
32751594 |
T |
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| Q |
101 |
gcacggtatagttcccattcttctccaccttccatatctgcctgccatgcactgatggaaataaca---------gaattaatgcagcagtatgattatc |
191 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |
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| T |
32751593 |
gcacggtatagttcccattcttctccaccttccatatctgcctgccatgcactgatggaaataacagaatctgcagaattattgcagcagtatgattatc |
32751494 |
T |
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| Q |
192 |
aaagaggtgttggatcaaatttgaattccactccttctacaccttcatatttgcaagcaaa |
252 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
32751493 |
aaagaggtgttggatcaaatttgaattccactccttctacaccttcatatttacaagcaaa |
32751433 |
T |
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