View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15517_high_2 (Length: 659)
Name: NF15517_high_2
Description: NF15517
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15517_high_2 |
 |  |
|
Alignment Details
Target: chr6 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 211 - 486
Target Start/End: Complemental strand, 2968083 - 2967808
Alignment:
| Q |
211 |
catccatcggaaaccaagcatctcaccatctcctcttcacactccacccaaagggactccttcaccgcctcctctttatccaaaactgcttcggcttctt |
310 |
Q |
| |
|
||||||||||| ||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
2968083 |
catccatcggagaccaaacatctcaccatctcctcttcacactccatccaaacagactccttcaccgcctcctcttcatccaaaactgcttcggcttctt |
2967984 |
T |
 |
| Q |
311 |
cacacaacctatcaccgatcttccaaaccaccggcgacgccaccaacgacaacttttcaggtccttcagatggattaaccattctcaaccgtccttcacc |
410 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
2967983 |
cacacaacctatcaccgatcttccaaaccatcggcggcgccaccaacgacaacttttcaggtccttcagatggattaacgattctcaaccgtccttcacc |
2967884 |
T |
 |
| Q |
411 |
gttagcgatttcagattctcaacccaatcttctgattctcctccatcactgagtccaaaaggttcgattttgaatc |
486 |
Q |
| |
|
|| |||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
2967883 |
gtcagcgatttcaaattctcaactcaatcttctgattctcctccatcactgagttcaaaaggttcgattttgaatc |
2967808 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 187; Significance: 1e-101; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 2 - 212
Target Start/End: Complemental strand, 31405673 - 31405463
Alignment:
| Q |
2 |
gtccttttttgaagtaaataatggctatacaagcctgatcctgtttttgctatattttggagctgatggaacggaattggaacaaaagtttgatatgatg |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||| |
|
|
| T |
31405673 |
gtccttttttgaagtaaataatggctatacaagcctgatcctgtttttgctatattttggagctgatggaacaggattggaacaaaagttttatatgatg |
31405574 |
T |
 |
| Q |
102 |
gacactgatggctgcgatcatattttatttttacatccattttaaattatgtaataataacaacattaaattaaccatttcgaagtacattacaacgtat |
201 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31405573 |
tacattgatggctgcgatcatattttatttttacatccattttaaattatgtaataataacaacattaaattaaccatttcgaagtacattacaacgtat |
31405474 |
T |
 |
| Q |
202 |
cgagtgtatca |
212 |
Q |
| |
|
|||||||||| |
|
|
| T |
31405473 |
agagtgtatca |
31405463 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 211 - 272
Target Start/End: Complemental strand, 31409491 - 31409430
Alignment:
| Q |
211 |
catccatcggaaaccaagcatctcaccatctcctcttcacactccacccaaagggactcctt |
272 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
31409491 |
catccataggaaaccaagcatctcaccatctcctcttcacactccacccaaacagactcctt |
31409430 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 183; Significance: 1e-98; HSPs: 18)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 2 - 212
Target Start/End: Complemental strand, 14205458 - 14205248
Alignment:
| Q |
2 |
gtccttttttgaagtaaataatggctatacaagcctgatcctgtttttgctatattttggagctgatggaacggaattggaacaaaagtttgatatgatg |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||| |
|
|
| T |
14205458 |
gtccttttttgaagtaaataatggctatacaagcctgatcctgtttttgctatattttggagctgatggaacaggattggaacaaaagtttaatatgatg |
14205359 |
T |
 |
| Q |
102 |
gacactgatggctgcgatcatattttatttttacatccattttaaattatgtaataataacaacattaaattaaccatttcgaagtacattacaacgtat |
201 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
14205358 |
tacattgatggctgcgatcatattttatttttacatccattttaaattatgtaataataacaacattaaattaaccatttcgaagtacattacagcgtat |
14205259 |
T |
 |
| Q |
202 |
cgagtgtatca |
212 |
Q |
| |
|
|||||||||| |
|
|
| T |
14205258 |
agagtgtatca |
14205248 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 318 - 488
Target Start/End: Original strand, 30179490 - 30179660
Alignment:
| Q |
318 |
cctatcaccgatcttccaaaccaccggcgacgccaccaacgacaacttttcaggtccttcagatggattaaccattctcaaccgtccttcaccgttagcg |
417 |
Q |
| |
|
|||||| |||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||| | ||||||| |||| ||||| |||||| |
|
|
| T |
30179490 |
cctatcgccgatcttccaaaccaccggtggcgccaccaacgacaacttttccattccttcagatggattaacgagtctcaactgtccgtcaccattagcg |
30179589 |
T |
 |
| Q |
418 |
atttcagattctcaacccaatcttctgattctcctccatcactgagtccaaaaggttcgattttgaatcct |
488 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |
|
|
| T |
30179590 |
atttcagattctcaccccaatcttctgattctcctccatcactgattccaaaaggttccattttgaatcct |
30179660 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 223 - 321
Target Start/End: Original strand, 30179372 - 30179470
Alignment:
| Q |
223 |
accaagcatctcaccatctcctcttcacactccacccaaagggactccttcaccgcctcctctttatccaaaactgcttcggcttcttcacacaaccta |
321 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||| |
|
|
| T |
30179372 |
accaagcatctcaccatctcctcttcacactccacctaaacaaactccttcaccgccttctcttcatccaaaactgcttcggcttcttcacaccaccta |
30179470 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 211 - 272
Target Start/End: Complemental strand, 14209255 - 14209194
Alignment:
| Q |
211 |
catccatcggaaaccaagcatctcaccatctcctcttcacactccacccaaagggactcctt |
272 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
14209255 |
catccataggaaaccaagcatctcaccatctcctcttcacactccacccaaacagactcctt |
14209194 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 211 - 272
Target Start/End: Complemental strand, 14210206 - 14210145
Alignment:
| Q |
211 |
catccatcggaaaccaagcatctcaccatctcctcttcacactccacccaaagggactcctt |
272 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
14210206 |
catccataggaaaccaagcatctcaccatctcctcttcacactccacccaaacagactcctt |
14210145 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 211 - 272
Target Start/End: Complemental strand, 14211175 - 14211114
Alignment:
| Q |
211 |
catccatcggaaaccaagcatctcaccatctcctcttcacactccacccaaagggactcctt |
272 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
14211175 |
catccataggaaaccaagcatctcaccatctcctcttcacactccacccaaacagactcctt |
14211114 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 211 - 272
Target Start/End: Complemental strand, 14212126 - 14212065
Alignment:
| Q |
211 |
catccatcggaaaccaagcatctcaccatctcctcttcacactccacccaaagggactcctt |
272 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
14212126 |
catccataggaaaccaagcatctcaccatctcctcttcacactccacccaaacagactcctt |
14212065 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 211 - 272
Target Start/End: Complemental strand, 14213095 - 14213034
Alignment:
| Q |
211 |
catccatcggaaaccaagcatctcaccatctcctcttcacactccacccaaagggactcctt |
272 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
14213095 |
catccataggaaaccaagcatctcaccatctcctcttcacactccacccaaacagactcctt |
14213034 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 211 - 272
Target Start/End: Complemental strand, 14215032 - 14214971
Alignment:
| Q |
211 |
catccatcggaaaccaagcatctcaccatctcctcttcacactccacccaaagggactcctt |
272 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
14215032 |
catccataggaaaccaagcatctcaccatctcctcttcacactccacccaaacagactcctt |
14214971 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 211 - 272
Target Start/End: Complemental strand, 14216001 - 14215940
Alignment:
| Q |
211 |
catccatcggaaaccaagcatctcaccatctcctcttcacactccacccaaagggactcctt |
272 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
14216001 |
catccataggaaaccaagcatctcaccatctcctcttcacactccacccaaacagactcctt |
14215940 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 211 - 272
Target Start/End: Complemental strand, 14216952 - 14216891
Alignment:
| Q |
211 |
catccatcggaaaccaagcatctcaccatctcctcttcacactccacccaaagggactcctt |
272 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
14216952 |
catccataggaaaccaagcatctcaccatctcctcttcacactccacccaaacagactcctt |
14216891 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 211 - 272
Target Start/End: Complemental strand, 14217903 - 14217842
Alignment:
| Q |
211 |
catccatcggaaaccaagcatctcaccatctcctcttcacactccacccaaagggactcctt |
272 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
14217903 |
catccataggaaaccaagcatctcaccatctcctcttcacactccacccaaacagactcctt |
14217842 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 211 - 272
Target Start/End: Complemental strand, 14218873 - 14218812
Alignment:
| Q |
211 |
catccatcggaaaccaagcatctcaccatctcctcttcacactccacccaaagggactcctt |
272 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
14218873 |
catccataggaaaccaagcatctcaccatctcctcttcacactccacccaaacagactcctt |
14218812 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 211 - 272
Target Start/End: Complemental strand, 14219842 - 14219781
Alignment:
| Q |
211 |
catccatcggaaaccaagcatctcaccatctcctcttcacactccacccaaagggactcctt |
272 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
14219842 |
catccataggaaaccaagcatctcaccatctcctcttcacactccacccaaacagactcctt |
14219781 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 211 - 272
Target Start/End: Complemental strand, 14220793 - 14220732
Alignment:
| Q |
211 |
catccatcggaaaccaagcatctcaccatctcctcttcacactccacccaaagggactcctt |
272 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
14220793 |
catccataggaaaccaagcatctcaccatctcctcttcacactccacccaaacagactcctt |
14220732 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 211 - 272
Target Start/End: Complemental strand, 14221762 - 14221701
Alignment:
| Q |
211 |
catccatcggaaaccaagcatctcaccatctcctcttcacactccacccaaagggactcctt |
272 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
14221762 |
catccataggaaaccaagcatctcaccatctcctcttcacactccacccaaacagactcctt |
14221701 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 211 - 272
Target Start/End: Complemental strand, 14222731 - 14222670
Alignment:
| Q |
211 |
catccatcggaaaccaagcatctcaccatctcctcttcacactccacccaaagggactcctt |
272 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
14222731 |
catccataggaaaccaagcatctcaccatctcctcttcacactccacccaaacagactcctt |
14222670 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 211 - 262
Target Start/End: Complemental strand, 14214063 - 14214012
Alignment:
| Q |
211 |
catccatcggaaaccaagcatctcaccatctcctcttcacactccacccaaa |
262 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14214063 |
catccataggaaaccaagcatctcaccatctcctcttcacactccacccaaa |
14214012 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 156; Significance: 2e-82; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 211 - 398
Target Start/End: Complemental strand, 40981379 - 40981192
Alignment:
| Q |
211 |
catccatcggaaaccaagcatctcaccatctcctcttcacactccacccaaagggactccttcaccgcctcctctttatccaaaactgcttcggcttctt |
310 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
40981379 |
catccatcggagaccaagcatctcaccatctcctcttcacactccacccaaacagactccttcaccgcctcctcttcatccaaaactgctccggcttctt |
40981280 |
T |
 |
| Q |
311 |
cacacaacctatcaccgatcttccaaaccaccggcgacgccaccaacgacaacttttcaggtccttcagatggattaaccattctcaa |
398 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||| |
|
|
| T |
40981279 |
cacacaacctatcaccgatcttccaaaccaccggcggcgccaccaacgacaacttttcaggttcttcagatggattaacgattctcaa |
40981192 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 211 - 280
Target Start/End: Original strand, 50290720 - 50290789
Alignment:
| Q |
211 |
catccatcggaaaccaagcatctcaccatctcctcttcacactccacccaaagggactccttcaccgcct |
280 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
50290720 |
catccatcggagaccaagcatctcaccatctcctcttcacactccacacaaacagactccttcaccgcct |
50290789 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 397 - 480
Target Start/End: Complemental strand, 24036483 - 24036400
Alignment:
| Q |
397 |
aaccgtccttcaccgttagcgatttcagattctcaacccaatcttctgattctcctccatcactgagtccaaaaggttcgattt |
480 |
Q |
| |
|
|||| ||||||||| ||| |||||||||||||||| || | || |||||||||||||||| |||||| |||||||| |||| |
|
|
| T |
24036483 |
aaccatccttcaccattaacgatttcagattctcatccaagcctgttgattctcctccatcattgagtcttaaaggttcaattt |
24036400 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 120; Significance: 5e-61; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 211 - 370
Target Start/End: Complemental strand, 14459053 - 14458894
Alignment:
| Q |
211 |
catccatcggaaaccaagcatctcaccatctcctcttcacactccacccaaagggactccttcaccgcctcctctttatccaaaactgcttcggcttctt |
310 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
14459053 |
catccatcggagaccaagcatctcaccatctcctcttcacattccacccaaatagactctttcaccgcctcctcttcatccaaaactgcttcggcttctt |
14458954 |
T |
 |
| Q |
311 |
cacacaacctatcaccgatcttccaaaccaccggcgacgccaccaacgacaacttttcag |
370 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||| |
|
|
| T |
14458953 |
cacacaacctatcaccgatcttccaaaccaccggcggcgccatgaacgacaatttttcag |
14458894 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 211 - 370
Target Start/End: Complemental strand, 12812694 - 12812535
Alignment:
| Q |
211 |
catccatcggaaaccaagcatctcaccatctcctcttcacactccacccaaagggactccttcaccgcctcctctttatccaaaactgcttcggcttctt |
310 |
Q |
| |
|
||||||||||| || |||||||| |||||||||||||||||||||| ||||| ||||||||||| ||||| |||| |||||||||| |||||||||||| |
|
|
| T |
12812694 |
catccatcggagacaaagcatcttaccatctcctcttcacactccaaccaaatagactccttcacagcctcttcttcatccaaaactacttcggcttctt |
12812595 |
T |
 |
| Q |
311 |
cacacaacctatcaccgatcttccaaaccaccggcgacgccaccaacgacaacttttcag |
370 |
Q |
| |
|
|||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
12812594 |
cacacaacctatcacccatcttccaaaccactggcggcgccaccaacgacaacttttcag |
12812535 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 90; Significance: 4e-43; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 355 - 488
Target Start/End: Original strand, 43903834 - 43903967
Alignment:
| Q |
355 |
aacgacaacttttcaggtccttcagatggattaaccattctcaaccgtccttcaccgttagcgatttcagattctcaacccaatcttctgattctcctcc |
454 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| ||||||||| |||||||||| |||| ||||||||||||||| |||| |||| ||||||||||| |
|
|
| T |
43903834 |
aacgacaacttttccagtccttcagatggattaacgattctcaacagtccttcaccattagtgatttcagattctcaccccattctttcgattctcctcc |
43903933 |
T |
 |
| Q |
455 |
atcactgagtccaaaaggttcgattttgaatcct |
488 |
Q |
| |
|
||||||||||||| |||||||||||||||||||| |
|
|
| T |
43903934 |
atcactgagtccagaaggttcgattttgaatcct |
43903967 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 391 - 484
Target Start/End: Complemental strand, 22009343 - 22009254
Alignment:
| Q |
391 |
attctcaaccgtccttcaccgttagcgatttcagattctcaacccaatcttctgattctcctccatcactgagtccaaaaggttcgattttgaa |
484 |
Q |
| |
|
||||| |||| ||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
22009343 |
attcttaaccatccttcaccattagcgatttcagattctcaccccaatcttctgattctcctgcatcactgagtcc----ggttcgattttgaa |
22009254 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University