View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15519_low_7 (Length: 333)
Name: NF15519_low_7
Description: NF15519
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15519_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 1 - 316
Target Start/End: Original strand, 46999761 - 47000080
Alignment:
| Q |
1 |
cgttgacaaagatgatcgcat----aacaacattnnnnnnngatagacaattttgattatttgaataaattatgtttgacatttcttccaacaataattg |
96 |
Q |
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||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46999761 |
cgttgacaaagatgatcgcatcaataacaacattaaaaaaagatagacaattttgattatttgaataaattatgtttgacatttcttccaacaataattg |
46999860 |
T |
|
| Q |
97 |
aactttttgaggtcatttgatgtgtgttgtgttagtcaatttgagaaaaataatttgagagagacatattcaaattattaatatgggtggttcaaaatca |
196 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46999861 |
aactttttgaggtcatttgatgtgtgttgtgttagtcaattttagaaaaataatttgagagagacatattcaaattattaatatgggtggttcaaaatca |
46999960 |
T |
|
| Q |
197 |
acacagtttgtagtgcttcatgcatgtggtggttttatttggatcttcttggctgcaaatgcacttaaaatatctgaaatagacaaacatgttcagtgtc |
296 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
46999961 |
acacagtttgtagtgcttcatgcatgtggtggttttatttggatctttttggctgcaaatgcacttaaaatatctgaaatagacaaacatgtacagtgtc |
47000060 |
T |
|
| Q |
297 |
ttgaaagtaactaataccgt |
316 |
Q |
| |
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|||||||||||||||||||| |
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| T |
47000061 |
ttgaaagtaactaataccgt |
47000080 |
T |
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