View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15521_low_4 (Length: 430)

Name: NF15521_low_4
Description: NF15521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15521_low_4
NF15521_low_4
[»] chr5 (31 HSPs)
chr5 (124-416)||(8806122-8806415)
chr5 (122-416)||(3654679-3654974)
chr5 (146-416)||(38915540-38915811)
chr5 (146-416)||(29789552-29789824)
chr5 (148-416)||(5121015-5121287)
chr5 (207-416)||(13826101-13826317)
chr5 (146-414)||(13820691-13820964)
chr5 (251-410)||(37134741-37134902)
chr5 (266-416)||(6769310-6769457)
chr5 (189-416)||(43171272-43171496)
chr5 (146-221)||(23318485-23318560)
chr5 (150-290)||(23151541-23151681)
chr5 (295-416)||(29149660-29149782)
chr5 (332-416)||(5578620-5578705)
chr5 (186-411)||(16040055-16040278)
chr5 (332-416)||(42879602-42879687)
chr5 (306-416)||(38491044-38491156)
chr5 (245-342)||(20891318-20891416)
chr5 (305-416)||(7850312-7850425)
chr5 (332-416)||(9409564-9409649)
chr5 (335-416)||(13382615-13382697)
chr5 (251-324)||(23319701-23319775)
chr5 (367-416)||(20892315-20892364)
chr5 (166-263)||(29150502-29150599)
chr5 (335-416)||(23962857-23962939)
chr5 (49-98)||(8806027-8806076)
chr5 (332-416)||(13490397-13490482)
chr5 (367-416)||(18889075-18889124)
chr5 (300-400)||(14651716-14651818)
chr5 (367-416)||(2676972-2677021)
chr5 (367-411)||(16686726-16686770)
[»] chr3 (28 HSPs)
chr3 (149-416)||(30190997-30191266)
chr3 (174-416)||(29713813-29714053)
chr3 (185-397)||(1424721-1424933)
chr3 (146-416)||(12893057-12893330)
chr3 (157-416)||(10992911-10993169)
chr3 (185-416)||(47184972-47185205)
chr3 (147-259)||(11830316-11830428)
chr3 (245-416)||(11639916-11640089)
chr3 (164-416)||(44663183-44663421)
chr3 (266-416)||(16876821-16876970)
chr3 (256-416)||(1698426-1698588)
chr3 (283-415)||(53472130-53472263)
chr3 (345-416)||(17147225-17147296)
chr3 (335-416)||(10994164-10994246)
chr3 (284-400)||(4127547-4127664)
chr3 (305-400)||(23044880-23044977)
chr3 (186-416)||(3917989-3918228)
chr3 (335-416)||(27941531-27941613)
chr3 (305-416)||(31884940-31885053)
chr3 (267-398)||(40145491-40145621)
chr3 (295-416)||(6024740-6024862)
chr3 (335-416)||(19157100-19157182)
chr3 (335-416)||(53076983-53077065)
chr3 (333-413)||(15760869-15760950)
chr3 (335-416)||(25071650-25071732)
chr3 (28-75)||(47185419-47185468)
chr3 (175-216)||(46947640-46947681)
chr3 (367-416)||(52448150-52448199)
[»] chr8 (26 HSPs)
chr8 (159-416)||(11648592-11648850)
chr8 (159-416)||(24190187-24190442)
chr8 (246-416)||(9382150-9382322)
chr8 (245-416)||(28374489-28374660)
chr8 (175-416)||(9137541-9137780)
chr8 (275-416)||(23232178-23232321)
chr8 (273-416)||(32073265-32073413)
chr8 (133-229)||(23232079-23232175)
chr8 (335-416)||(1981603-1981685)
chr8 (335-416)||(45117473-45117555)
chr8 (306-416)||(28509258-28509370)
chr8 (334-416)||(4432086-4432169)
chr8 (331-416)||(16729737-16729823)
chr8 (335-416)||(31597529-31597611)
chr8 (332-416)||(7972993-7973078)
chr8 (300-416)||(2879196-2879314)
chr8 (335-416)||(3762704-3762786)
chr8 (335-416)||(6927561-6927643)
chr8 (332-416)||(40971449-40971534)
chr8 (367-416)||(7263680-7263729)
chr8 (147-235)||(24682815-24682904)
chr8 (332-416)||(39906254-39906339)
chr8 (146-226)||(961163-961243)
chr8 (300-366)||(11994691-11994758)
chr8 (333-416)||(2807702-2807786)
chr8 (31-76)||(11648101-11648148)
[»] chr2 (35 HSPs)
chr2 (146-416)||(13597700-13597971)
chr2 (146-416)||(19091009-19091280)
chr2 (245-416)||(30386861-30387033)
chr2 (124-320)||(31548966-31549162)
chr2 (185-416)||(25621446-25621678)
chr2 (188-416)||(14904031-14904261)
chr2 (146-416)||(6883005-6883278)
chr2 (245-416)||(38566131-38566296)
chr2 (262-414)||(9057409-9057561)
chr2 (245-416)||(10022917-10023090)
chr2 (165-416)||(11199129-11199382)
chr2 (306-416)||(7880344-7880456)
chr2 (175-412)||(38422792-38423029)
chr2 (175-416)||(41302303-41302544)
chr2 (164-416)||(24484483-24484734)
chr2 (335-416)||(33054780-33054862)
chr2 (305-416)||(19678026-19678139)
chr2 (305-416)||(29303174-29303287)
chr2 (149-234)||(43673105-43673191)
chr2 (332-416)||(22575996-22576081)
chr2 (367-416)||(41422923-41422972)
chr2 (332-416)||(41825976-41826061)
chr2 (300-416)||(18781161-18781279)
chr2 (276-391)||(41422808-41422921)
chr2 (335-416)||(44314058-44314140)
chr2 (335-416)||(44322237-44322319)
chr2 (335-416)||(45277506-45277588)
chr2 (332-416)||(2554063-2554148)
chr2 (332-416)||(27861833-27861918)
chr2 (300-416)||(2565619-2565737)
chr2 (335-416)||(33015208-33015290)
chr2 (367-416)||(19685800-19685849)
chr2 (300-400)||(90308-90410)
chr2 (307-375)||(25416047-25416117)
chr2 (31-98)||(31548851-31548920)
[»] chr4 (31 HSPs)
chr4 (153-416)||(41509027-41509290)
chr4 (147-416)||(10373196-10373468)
chr4 (245-416)||(10142150-10142323)
chr4 (159-416)||(1843000-1843255)
chr4 (159-416)||(9921694-9921948)
chr4 (165-416)||(52459023-52459276)
chr4 (165-416)||(52460280-52460533)
chr4 (245-411)||(21320025-21320192)
chr4 (284-416)||(42512194-42512328)
chr4 (262-416)||(29282952-29283107)
chr4 (186-398)||(24611216-24611430)
chr4 (300-416)||(13957257-13957375)
chr4 (305-416)||(51337649-51337762)
chr4 (309-410)||(3665451-3665554)
chr4 (335-416)||(10095037-10095119)
chr4 (329-416)||(9900071-9900159)
chr4 (252-394)||(25201039-25201183)
chr4 (146-221)||(25201197-25201272)
chr4 (305-416)||(28143439-28143552)
chr4 (332-416)||(39480263-39480348)
chr4 (207-289)||(3665324-3665406)
chr4 (159-237)||(9896383-9896460)
chr4 (300-416)||(14192302-14192420)
chr4 (332-416)||(6261593-6261678)
chr4 (367-416)||(7413791-7413840)
chr4 (367-416)||(7459872-7459921)
chr4 (332-391)||(36213765-36213824)
chr4 (370-416)||(23935828-23935874)
chr4 (175-228)||(6830670-6830723)
chr4 (295-395)||(51890406-51890508)
chr4 (295-395)||(51890680-51890782)
[»] chr1 (25 HSPs)
chr1 (175-415)||(24185519-24185760)
chr1 (146-416)||(5509680-5509952)
chr1 (245-411)||(47559476-47559642)
chr1 (186-415)||(5209545-5209776)
chr1 (245-416)||(47397450-47397624)
chr1 (185-416)||(12027794-12028027)
chr1 (334-416)||(49229351-49229434)
chr1 (273-416)||(9023220-9023365)
chr1 (329-416)||(36296700-36296788)
chr1 (329-400)||(42722251-42722323)
chr1 (334-416)||(25095172-25095255)
chr1 (346-416)||(48646161-48646232)
chr1 (332-416)||(23664120-23664205)
chr1 (305-416)||(28945803-28945916)
chr1 (335-416)||(5049462-5049544)
chr1 (346-416)||(12783996-12784066)
chr1 (335-416)||(17967339-17967421)
chr1 (335-416)||(48596367-48596449)
chr1 (335-416)||(21906386-21906468)
chr1 (335-412)||(27430805-27430883)
chr1 (335-416)||(34307461-34307543)
chr1 (367-416)||(48999410-48999459)
chr1 (333-416)||(26221682-26221766)
chr1 (335-416)||(22070510-22070592)
chr1 (165-265)||(44310547-44310647)
[»] chr7 (33 HSPs)
chr7 (176-416)||(40934056-40934297)
chr7 (153-416)||(9420462-9420727)
chr7 (146-416)||(21863606-21863877)
chr7 (245-415)||(28460165-28460338)
chr7 (277-416)||(39038847-39038988)
chr7 (146-416)||(45445899-45446164)
chr7 (274-416)||(43179378-43179521)
chr7 (150-416)||(5770884-5771141)
chr7 (333-416)||(29636904-29636988)
chr7 (266-416)||(35118193-35118342)
chr7 (334-416)||(24441941-24442024)
chr7 (185-416)||(8113779-8114010)
chr7 (329-400)||(48636716-48636788)
chr7 (305-414)||(8069580-8069691)
chr7 (276-416)||(8604552-8604694)
chr7 (333-416)||(41822148-41822232)
chr7 (305-414)||(48238459-48238570)
chr7 (305-416)||(6189387-6189500)
chr7 (331-416)||(20394796-20394882)
chr7 (335-416)||(31072539-31072621)
chr7 (295-416)||(44733643-44733764)
chr7 (276-416)||(3124209-3124354)
chr7 (147-226)||(39038750-39038829)
chr7 (335-416)||(8389314-8389396)
chr7 (332-416)||(135661-135746)
chr7 (367-416)||(1623572-1623621)
chr7 (367-416)||(4539873-4539922)
chr7 (367-416)||(23381111-23381160)
chr7 (367-416)||(35478025-35478074)
chr7 (300-400)||(19311919-19312021)
chr7 (367-416)||(13754122-13754171)
chr7 (367-416)||(18667375-18667424)
chr7 (376-412)||(15991930-15991966)
[»] scaffold0263 (1 HSPs)
scaffold0263 (146-416)||(18424-18696)
[»] chr6 (23 HSPs)
chr6 (185-416)||(11680721-11680954)
chr6 (207-414)||(3229087-3229292)
chr6 (245-416)||(19107943-19108112)
chr6 (245-415)||(31129753-31129920)
chr6 (207-416)||(26817365-26817575)
chr6 (306-416)||(33516611-33516723)
chr6 (335-416)||(1422962-1423044)
chr6 (150-322)||(22524816-22524988)
chr6 (330-416)||(1131781-1131868)
chr6 (335-416)||(15060173-15060255)
chr6 (332-416)||(18675360-18675445)
chr6 (335-416)||(22012131-22012213)
chr6 (335-416)||(34043551-34043633)
chr6 (335-399)||(21442661-21442726)
chr6 (334-412)||(4065601-4065680)
chr6 (49-87)||(15603786-15603824)
chr6 (12-74)||(1831209-1831273)
chr6 (367-416)||(20990444-20990493)
chr6 (367-416)||(26212911-26212960)
chr6 (367-416)||(1603377-1603426)
chr6 (336-412)||(4090808-4090885)
chr6 (367-400)||(22524749-22524782)
chr6 (48-76)||(11680480-11680508)
[»] scaffold1266 (1 HSPs)
scaffold1266 (146-416)||(1320-1592)
[»] scaffold0160 (1 HSPs)
scaffold0160 (207-416)||(25125-25336)
[»] scaffold0002 (1 HSPs)
scaffold0002 (146-394)||(98176-98425)
[»] scaffold0116 (1 HSPs)
scaffold0116 (161-416)||(40823-41076)
[»] scaffold1364 (1 HSPs)
scaffold1364 (146-394)||(873-1127)
[»] scaffold0178 (1 HSPs)
scaffold0178 (279-416)||(2387-2526)
[»] scaffold0743 (1 HSPs)
scaffold0743 (305-416)||(3287-3400)
[»] scaffold0093 (1 HSPs)
scaffold0093 (367-416)||(50935-50984)
[»] scaffold0016 (4 HSPs)
scaffold0016 (332-416)||(87645-87730)
scaffold0016 (335-416)||(88122-88204)
scaffold0016 (335-416)||(88598-88680)
scaffold0016 (335-416)||(89074-89156)
[»] scaffold0137 (1 HSPs)
scaffold0137 (186-289)||(21299-21402)
[»] scaffold0552 (1 HSPs)
scaffold0552 (175-228)||(10171-10224)


Alignment Details
Target: chr5 (Bit Score: 162; Significance: 3e-86; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 124 - 416
Target Start/End: Original strand, 8806122 - 8806415
Alignment:
Q  124 ttagcacccgagaacaatagacccacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaattta 223  Q
    ||||| || |||||||||||  |||| ||||||||||||||||||| || | ||||||||||||||||||||||||||| |||||| ||||||||||| |    
T  8806122 ttagcgcctgagaacaataggtccacgtgatcctaaatgcgtctcacatcgatttcatgatcatgaatgcgtctcacatgattttgtattatcaaattca 8806221  T
Q  224 attttgtaatccttataatttattcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttc 323  Q
    |||||| ||||||| ||||  ||||| ||||||||||||||| ||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  8806222 attttgcaatccttttaatcaattcaagaaagttgacattactataatgatataatttaaatttttgaaacctttgaaagacaagattaaaattaatttc 8806321  T
Q  324 tcta-aaggcccattttcaagtaaaatataattagtttggttataaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    | ||  |  | ||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |  ||||||||||||||    
T  8806322 tttactatactcattttcaactaaaatataatttgttttgttataaaattatcccaatttcttggataataaatatgacaaatatttttaatat 8806415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 122 - 416
Target Start/End: Complemental strand, 3654974 - 3654679
Alignment:
Q  122 tattagcacccgagaacaatagacccacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatt 221  Q
    |||| ||||| |||||||| ||   |||||||| ||||||| |||||| ||  ||||||||||||| |||||||||  ||| |||||||||| |||||||    
T  3654974 tattggcacctgagaacaacagggtcacatgattctaaatgtgtctcatatcagtttcatgatcataaatgcgtcttgcatgattttgcattctcaaatt 3654875  T
Q  222 taattttgtaatccttataatttattcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatt 321  Q
    |||||||| ||||  | ||||  ||||| ||||||||||||||| || || |||||||||||||||||  ||||||| ||||||||||||||||||| ||    
T  3654874 taattttgcaatctctttaatcaattcaagaaagttgacattactatgatgatataatttaatttttttgaacctttgaaagacaagattaaaattagtt 3654775  T
Q  322 tctcta-aaggcccattttcaagtaaaatataattagtttggttataaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||  ||| |||||||||| ||||||||||||  ||| || |||||||||||  ||||||||||||||||||||||| |||||||||||||||    
T  3654774 tctctagtaggtccattttcaactaaaatataatttattttgtaataaaattatcttaatttcttggataataaatatcatcaatatttttaatat 3654679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 146 - 416
Target Start/End: Original strand, 38915540 - 38915811
Alignment:
Q  146 ccacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataattta 245  Q
    ||||||||||||||||||||| || ||  |||| |||||||||||||||| || ||| |||| ||||||||||||| ||||||| ||||||| | ||  |    
T  38915540 ccacatgatcctaaatgcgtcccacatcagtttaatgatcatgaatgcgtatcgcatgatttagcattatcaaattcaattttgcaatcctttttatcaa 38915639  T
Q  246 ttcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctcta-aaggcccattttcaagt 344  Q
    |||  ||||||||||||||| ||||  |||||||||||||||||| ||||||| |||||||| ||||| | |||||||||||  ||||| |||||||| |    
T  38915640 ttctagaaagttgacattactataacgatataatttaattttttggaacctttgaaagacaacattaagactaatttctctagtaggcctattttcaact 38915739  T
Q  345 aaaatataattagtttggttataaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||||  |  ||| ||||||||||||||||||||||||||||||||||||| |  ||||| ||||||||    
T  38915740 aaaatatatatttttttgttataaaattatcccaatttcttggataataaatatgactaatatatttaatat 38915811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 146 - 416
Target Start/End: Complemental strand, 29789824 - 29789552
Alignment:
Q  146 ccacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataattta 245  Q
    ||||||||||| |||||||||||| || ||| ||||||||||||||| ||||| ||| || || |||||||| ||| |||| || || |||  ||||  |    
T  29789824 ccacatgatcccaaatgcgtctcacatcggtctcatgatcatgaatgtgtctcgcatgatcttacattatcatattcaattgtgcaaccctcttaatcaa 29789725  T
Q  246 ttcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctcta-aaggcccattttcaagt 344  Q
    |||| |||||||||| |||| ||| | |||||||||| |||||||||| |||| ||| |||||||||| |||||||||||||  || ||||||||||| |    
T  29789724 ttcatgaaagttgacgttactatattgatataatttatttttttgaaatctttgaaaaacaagattaagattaatttctctagtagacccattttcaact 29789625  T
Q  345 aaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||| |||| |||| ||||| |||||||| ||||||||||||||||||||||||| | |||||||| ||||    
T  29789624 aaaatagaatttgttttgttatgaaaattattccaatttcttggataataaatatcaccgatattttttatat 29789552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 148 - 416
Target Start/End: Original strand, 5121015 - 5121287
Alignment:
Q  148 acatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataat-tttgcattatcaaatttaattttgtaatccttataatttat 246  Q
    |||||||||||||||||||||| ||    |||| |||||| |||| ||||  ||| || |||||||||||||||| |||| || |||||||  ||   ||    
T  5121015 acatgatcctaaatgcgtctcacatctagttcaggatcat-aatgtgtcttgcatgatctttgcattatcaaattcaattatgcaatcctttcaaacaat 5121113  T
Q  247 tcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaat--taatttctcta-aaggcccattttcaag 343  Q
    ||| |||||||||||| || ||| | |||||||||| ||||||  ||||||| |||||||||||||| ||  |||||||||||  ||||  ||||||||     
T  5121114 tcaagaaagttgacatcactatattgatataatttatttttttagaacctttgaaagacaagattaagattataatttctctagtaggctaattttcaat 5121213  T
Q  344 taaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||| |||| ||||  |||| ||||||||  |||||| ||||||||||||||||| |||||||||||||||    
T  5121214 taaaataaaatttgttttattatgaaaattatttcaattttttggataataaatatcaccaatatttttaatat 5121287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 207 - 416
Target Start/End: Original strand, 13826101 - 13826317
Alignment:
Q  207 ttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacattaccataattatataattta---attttttgaaacctttaaaag 303  Q
    ||||||||||||||| |||| || |||||||   ||  ||||| ||||||||||||||| ||| | ||||||||||   |||||||| ||  ||| | ||    
T  13826101 ttgcattatcaaattcaattatgaaatcctttcgatcaattcaagaaagttgacattactatattgatataatttatttattttttggaatttttgagag 13826200  T
Q  304 acaagattaaaattaatttctcta--aaggcc-cattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatc 399  Q
    |||||||||| |||||||| ||||  ||| ||  |||||||| ||||||| |||| |||| ||||| |||||||||||||||||||||||||||||||||    
T  13826201 acaagattaagattaatttatctagtaagcccatattttcaactaaaatagaatttgttttgttatgaaaattatcccaatttcttggataataaatatc 13826300  T
Q  400 agcaatatttttaatat 416  Q
    | | |||||||||||||    
T  13826301 atcgatatttttaatat 13826317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 146 - 414
Target Start/End: Original strand, 13820691 - 13820964
Alignment:
Q  146 ccacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataattta 245  Q
    |||| |||||| ||||||| |||| || |||||||||| | |||||||||||  ||| || ||||| ||||||||| |||| || ||||||| ||||  |    
T  13820691 ccacgtgatcccaaatgcgcctcacatcggtttcatgaacgtgaatgcgtcttgcatgatgttgcactatcaaattcaattatgcaatccttttaatcaa 13820790  T
Q  246 ttcacgaaagttgacattaccataattatataattt---aattttttgaaacctttaaaagacaagattaaaattaatttctcta-aaggcccattttca 341  Q
    || | ||||||||||||||| ||| | |||||||||     ||||||  |  |||| |||||||||||| | |||||||| | ||  || ||||||||||    
T  13820791 tttaagaaagttgacattactatattgatataatttgtattttttttttattctttgaaagacaagatttagattaatttatttagtagacccattttca 13820890  T
Q  342 agtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaat 414  Q
    | ||||||| | || |||| ||||| |||||||||| ||||||||| ||||||||||| | |||||||||||||    
T  13820891 actaaaatagattttgttttgttatgaaaattatccaaatttcttgaataataaatatgaccaatatttttaat 13820964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 251 - 410
Target Start/End: Complemental strand, 37134902 - 37134741
Alignment:
Q  251 gaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaat 349  Q
    |||| |||||||||| ||| | |||||||||| ||||| ||||||||| ||||||||||| ||||||||| | ||||  |||   |||||||| ||||||    
T  37134902 gaaaattgacattactatattgatataatttattttttcgaaacctttgaaagacaagatcaaaattaatatttctagtaggtgtattttcaactaaaat 37134803  T
Q  350 ataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttt 410  Q
    |||||| |||| ||||| |||||||| |||||||||| |||||||||||||| |||| ||||    
T  37134802 ataatttgttttgttatgaaaattattccaatttcttagataataaatatcaccaatttttt 37134741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 266 - 416
Target Start/End: Original strand, 6769310 - 6769457
Alignment:
Q  266 cataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaaaggcccattttcaagtaaaatataattagtttggtta 365  Q
    |||||| |||||||||||||||||| ||  ||| |||||||| ||||||||||||||||   | |||  ||||| || |||||||||||| |||| ||||    
T  6769310 cataatgatataatttaattttttggaaaatttcaaagacaacattaaaattaatttctagta-ggcttatttttaactaaaatataatttgttttgtta 6769408  T
Q  366 taaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||| ||  ||||||||||||||||||||| | |||||| ||||||||    
T  6769409 taaaattctc--aatttcttggataataaatatgatcaatatatttaatat 6769457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 189 - 416
Target Start/End: Original strand, 43171272 - 43171496
Alignment:
Q  189 aatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacattaccataattatataatttaattttt 288  Q
    |||| ||||| ||| || |||||||||||||||||| | || |||| ||   ||  ||| | ||||||||||||||| ||| | || ||||||| |||||    
T  43171272 aatgtgtctcgcatgatcttgcattatcaaatttaactatgcaatcatttcgatcaattaaagaaagttgacattactatattgatgtaatttatttttt 43171371  T
Q  289 tgaaacctttaaaagacaagattaaaattaatttctcta-aaggcccattttcaagtaaaatataattagtttggttataaaattatcccaatttcttgg 387  Q
    || ||||||| ||| | || ||||| |||||||||||||  ||| |||||||||| |||||||| ||| |||  |    ||||||||| |||| | ||||    
T  43171372 tggaacctttgaaaaaaaaaattaagattaatttctctagtaggtccattttcaactaaaatatcatttgttatg----aaaattatctcaatatattgg 43171467  T
Q  388 ataataaatatcagcaatatttttaatat 416  Q
    ||||||||||||| |||||||||||||||    
T  43171468 ataataaatatcaccaatatttttaatat 43171496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 146 - 221
Target Start/End: Original strand, 23318485 - 23318560
Alignment:
Q  146 ccacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatt 221  Q
    |||||||||||||||||||||||| ||| |||||||||| |||||||| |||| ||| ||||||||||||||||||    
T  23318485 ccacatgatcctaaatgcgtctcacattagtttcatgataatgaatgcatctcgcatgattttgcattatcaaatt 23318560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 150 - 290
Target Start/End: Complemental strand, 23151681 - 23151541
Alignment:
Q  150 atgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattca 249  Q
    |||||| | ||||||||| | || |||||||||||||||||||| |||| ||| || ||||| ||||||||| ||||||| |||||||  |||  |||||    
T  23151681 atgatcatgaatgcgtcttacatcggtttcatgatcatgaatgcatctcgcatgatcttgcaatatcaaattcaattttgcaatcctttcaatcaattca 23151582  T
Q  250 cgaaagttgacattaccataattatataatttaattttttg 290  Q
     |||| ||||||||||  || | |||||||||| |||||||    
T  23151581 agaaatttgacattacagtattgatataatttatttttttg 23151541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 295 - 416
Target Start/End: Complemental strand, 29149782 - 29149660
Alignment:
Q  295 ctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataat 392  Q
    |||| |||||||||||||| |||||||||||||  ||||  |||||||| ||||||| |||| | ||| |||| ||||||||| |||||| |||||||||    
T  29149782 ctttgaaagacaagattaagattaatttctctagtaggctgattttcaactaaaataaaatttgcttg-ttatgaaaattatctcaattttttggataat 29149684  T
Q  393 aaatatcagcaatatttttaatat 416  Q
    ||||||||  ||||||||||||||    
T  29149683 aaatatcacaaatatttttaatat 29149660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 332 - 416
Target Start/End: Original strand, 5578620 - 5578705
Alignment:
Q  332 cccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||||||| ||||||| |||| | || ||||| |||||||||||||||||||||||||||||||||  | |||||||||||||    
T  5578620 cccattttcaactaaaatagaatttgctttgttatgaaaattatcccaatttcttggataataaatatcgtcgatatttttaatat 5578705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 186 - 411
Target Start/End: Original strand, 16040055 - 16040278
Alignment:
Q  186 atgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacattaccataattatataatttaatt 285  Q
    ||||||| || || ||| || ||||||||||||||| |||| || |||||||  |||  ||||| ||||| ||||||||  ||| | ||||| |||   |    
T  16040055 atgaatgtgtttcgcatgatcttgcattatcaaattcaattctgcaatcctttcaatcaattcaagaaagatgacattattatattgatatagttt---t 16040151  T
Q  286 ttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttc 383  Q
    ||||| ||  ||| ||||| || ||||| |||||| ||||||  |||||||||||||| |||||||  ||| |||| ||||| ||||||||| |||||||    
T  16040152 ttttggaat-tttgaaagataatattaagattaatatctctagtaggcccattttcaattaaaataagatttgttttgttatgaaaattatctcaatttc 16040250  T
Q  384 ttggataataaatatcagcaatattttt 411  Q
    || ||||| |||||||| ||||||||||    
T  16040251 tttgataaaaaatatcaccaatattttt 16040278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 332 - 416
Target Start/End: Complemental strand, 42879687 - 42879602
Alignment:
Q  332 cccattttcaagtaaaatataattagtttggttataaaa-ttatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||||||| ||||||| |||| | || ||||||||| ||||||||||||||||||||| |||||||  |||||||||||||||    
T  42879687 cccattttcaactaaaatagaatttgctttgttataaaaattatcccaatttcttggataaaaaatatcgtcaatatttttaatat 42879602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 306 - 416
Target Start/End: Complemental strand, 38491156 - 38491044
Alignment:
Q  306 aagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagca 403  Q
    |||||||| |||||||| ||||  |||||||||||||| |||||||||||| |||| ||||| |||||| ||| |||||  ||||||||||||||||       
T  38491156 aagattaagattaatttatctagtaggcccattttcaactaaaatataatttgttttgttatgaaaattctcctaattttctggataataaatatcacat 38491057  T
Q  404 atatttttaatat 416  Q
    |||||||||||||    
T  38491056 atatttttaatat 38491044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 245 - 342
Target Start/End: Original strand, 20891318 - 20891416
Alignment:
Q  245 attcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaa 342  Q
    ||||| ||||||||||||| | ||| | |||||||||| ||||| | || |||| |||||||| ||||| |||||||||||||| ||||||||||||||    
T  20891318 attcaagaaagttgacatttctatattaatataatttattttttgggaatctttgaaagacaaaattaagattaatttctctaataggcccattttcaa 20891416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 416
Target Start/End: Complemental strand, 7850425 - 7850312
Alignment:
Q  305 caagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagc 402  Q
    ||||||||| ||||||||||| |  ||| |||||||||| |||||||||||| |||| ||||| |||||| || ||||||  ||||||||||||||||      
T  7850425 caagattaagattaatttctccagtaggtccattttcaactaaaatataatttgttttgttatgaaaattctctcaattttctggataataaatatcaca 7850326  T
Q  403 aatatttttaatat 416  Q
     |||||||||||||    
T  7850325 tatatttttaatat 7850312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 416
Target Start/End: Original strand, 9409564 - 9409649
Alignment:
Q  332 cccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||||||| ||||||| |||| | || ||||| ||||||||||||||||||||||||| |||||||  | |||||||||||||    
T  9409564 cccattttcaactaaaatagaatttgctttgttatgaaaattatcccaatttcttggataaaaaatatcgtcgatatttttaatat 9409649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 335 - 416
Target Start/End: Original strand, 13382615 - 13382697
Alignment:
Q  335 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||| ||||||| |||| | || ||||  |||||||||||||||||||||||||||||||||  | |||||||||||||    
T  13382615 attttcaactaaaatagaatttgctttgttacgaaaattatcccaatttcttggataataaatatcgtcgatatttttaatat 13382697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 251 - 324
Target Start/End: Original strand, 23319701 - 23319775
Alignment:
Q  251 gaaagttgacattaccataattatataatttaa-ttttttgaaacctttaaaagacaagattaaaattaatttct 324  Q
    ||||||||||||||| ||| | ||||||||||| |||||||||||| || |||||||| ||||| ||||||||||    
T  23319701 gaaagttgacattactatattgatataatttaatttttttgaaacccttgaaagacaaaattaagattaatttct 23319775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 416
Target Start/End: Original strand, 20892315 - 20892364
Alignment:
Q  367 aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||||||||| |||||||| ||||||||||| |||||||||||||||    
T  20892315 aaaattatcccaaattcttggaaaataaatatcatcaatatttttaatat 20892364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 166 - 263
Target Start/End: Complemental strand, 29150599 - 29150502
Alignment:
Q  166 ctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacatt 263  Q
    |||| ||||||||||| |||||||||||||| ||||| || |||||||||||| || |||| || |||| ||  |||  ||||| |||||||||||||    
T  29150599 ctcatattggtttcataatcatgaatgcgtcacacatgatattgcattatcaacttcaattatgcaatcttttcaatcaattcaagaaagttgacatt 29150502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 416
Target Start/End: Complemental strand, 23962939 - 23962857
Alignment:
Q  335 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||| ||||||| |||| | || ||||| ||||||||| |||||||||||||||||||||||    |||||||||||||    
T  23962939 attttcaactaaaatagaatttgctttgttatgaaaattatctcaatttcttggataataaatatcgttgatatttttaatat 23962857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 8806027 - 8806076
Alignment:
Q  49 cacctaagaataataacaccaaaaaagtttacattactaaacgcgtctca 98  Q
    ||||||||| ||||||||| ||||||||| ||||||||||| ||||||||    
T  8806027 cacctaagagtaataacacaaaaaaagttgacattactaaatgcgtctca 8806076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 332 - 416
Target Start/End: Complemental strand, 13490482 - 13490397
Alignment:
Q  332 cccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||||||| ||||||| |||| | || ||||| ||||| ||| ||||||||||||||||||||||   | |||||||||||||    
T  13490482 cccattttcaactaaaatagaatttgctttgttatgaaaatcatctcaatttcttggataataaatattgtcgatatttttaatat 13490397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 367 - 416
Target Start/End: Complemental strand, 18889124 - 18889075
Alignment:
Q  367 aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||||| |||||||||||||||||||||||  | |||||||||||||    
T  18889124 aaaattatctcaatttcttggataataaatatcgtcgatatttttaatat 18889075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 400
Target Start/End: Original strand, 14651716 - 14651818
Alignment:
Q  300 aaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaata 397  Q
    |||| ||| ||||| |||||||| ||||| |||||||||||||| |||||||| ||| |||| ||||| || ||| | |||||||  ||||||| |||||    
T  14651716 aaaggcaatattaagattaatttttctaataggcccattttcaactaaaatattattcgttttgttatgaagattcttccaattttctggataacaaata 14651815  T
Q  398 tca 400  Q
    |||    
T  14651816 tca 14651818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 416
Target Start/End: Complemental strand, 2677021 - 2676972
Alignment:
Q  367 aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||||||  |||||||||||||||||||||  | |||||||||||||    
T  2677021 aaaattatcctcatttcttggataataaatatcgtcgatatttttaatat 2676972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 411
Target Start/End: Original strand, 16686726 - 16686770
Alignment:
Q  367 aaaattatcccaatttcttggataataaatatcagcaatattttt 411  Q
    ||||| |||||||||||| |||||||||||||||  |||||||||    
T  16686726 aaaatcatcccaatttctcggataataaatatcactaatattttt 16686770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 134; Significance: 1e-69; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 149 - 416
Target Start/End: Original strand, 30190997 - 30191266
Alignment:
Q  149 catgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattc 248  Q
    ||||||||||||||||||||| ||  |||||||||||||||||||||||| ||| |||| ||||||||||||| ||||||| ||||||| ||||  ||||    
T  30190997 catgatcctaaatgcgtctcacatcagtttcatgatcatgaatgcgtctcgcatgatttagcattatcaaattcaattttgcaatccttttaatcaattc 30191096  T
Q  249 acgaaagttgacattaccataattatataatttaa-ttttttgaaacctttaaaagacaagattaaaattaatttctcta-aaggcccattttcaagtaa 346  Q
    | ||||||||||||||| ||||||||||||||||| ||||||| ||| ||| |||||||| ||||| |||||||||||||  ||||| |||||||| |||    
T  30191097 aagaaagttgacattactataattatataatttaatttttttggaacatttgaaagacaacattaagattaatttctctagtaggcctattttcaactaa 30191196  T
Q  347 aatataattagtttggttataaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||||  ||| |||||||||||||| |||||| ||||||||||||||| |  ||||| ||||||||    
T  30191197 aatataatttcttttgttataaaattatctcaattttttggataataaatatgactaatatatttaatat 30191266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 174 - 416
Target Start/End: Complemental strand, 29714053 - 29713813
Alignment:
Q  174 ggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacattaccataatta 273  Q
    ||||||||||||||||||||||||||||| || ||||| ||| ||||| ||||||| |||||||  |||  ||||| |||| |||||||||| ||| | |    
T  29714053 ggtttcatgatcatgaatgcgtctcacatgatcttgcaatattaaattcaattttgcaatcctttcaatcaattcaagaaatttgacattacaatattga 29713954  T
Q  274 tataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaaaggcccattttcaagtaaaatataattagtttggttat-aaaatt 372  Q
    ||||||||| ||||||| |||| |  |||||||||||||| |||||||||     |||| ||||||||| |||||||||||| |||| ||||| ||||||    
T  29713953 tataatttatttttttggaaccatagaaagacaagattaagattaatttc---gtaggctcattttcaactaaaatataatttgttttgttatgaaaatt 29713857  T
Q  373 atcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||||||||| |||||||||||||| |||||||||||||||    
T  29713856 atcccaatttcttagataataaatatcaccaatatttttaatat 29713813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 185 - 397
Target Start/End: Complemental strand, 1424933 - 1424721
Alignment:
Q  185 catgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacattaccataattatataatttaat 284  Q
    ||||||||||| || ||| |||| ||||||||||||| ||||||| ||||||| | ||  ||||  ||||||||||||||| ||||  ||||||||||||    
T  1424933 catgaatgcgtatcgcatgatttagcattatcaaattcaattttgcaatcctttttatcaattctagaaagttgacattactataacgatataatttaat 1424834  T
Q  285 tttttgaaacctttaaaagacaagattaaaattaatttctcta-aaggcccattttcaagtaaaatataattagtttggttataaaattatcccaatttc 383  Q
    |||||| ||||||| | |||||| ||||| |||||||||||||  ||||| |||||||| |||||||| |||  ||| ||||||||||||||||||||||    
T  1424833 tttttggaacctttgatagacaacattaagattaatttctctagtaggcctattttcaactaaaatat-attttttttgttataaaattatcccaatttc 1424735  T
Q  384 ttggataataaata 397  Q
    ||||||||||||||    
T  1424734 ttggataataaata 1424721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 146 - 416
Target Start/End: Complemental strand, 12893330 - 12893057
Alignment:
Q  146 ccacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataattta 245  Q
    ||||||||||| ||||| |||||| || |||||||| ||||||||||||| |  ||  || ||||||||||||||| |||| || ||||||| ||||  |    
T  12893330 ccacatgatcccaaatgtgtctcacatcggtttcataatcatgaatgcgttttgcaagatcttgcattatcaaattcaattatgcaatccttttaatcaa 12893231  T
Q  246 ttcacgaaagttgacattaccataattatataattta-attttttgaaacctttaaaagacaagattaaaattaatttctcta-aaggcccattttcaag 343  Q
    |||| ||||||||||||||| ||  | ||||||||||  ||||||| ||  ||| ||||| ||||||||||||||||||||||  ||| ||||||||||     
T  12893230 ttcaagaaagttgacattactatgttgatataatttattttttttggaatatttgaaagataagattaaaattaatttctctagtaggtccattttcaac 12893131  T
Q  344 taaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||| |||  ||||  |||| ||||||||| ||||||||||||||||||| |||| |||||| ||||||||    
T  12893130 taaaatagaatatgttttcttataaaaattatctcaatttcttggataataaacatcaccaatatatttaatat 12893057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 157 - 416
Target Start/End: Original strand, 10992911 - 10993169
Alignment:
Q  157 taaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagt 256  Q
    ||||||||| ||| || |||||||||||| |||||||||||| ||| || ||||| ||||||||| ||||||| |||||||  |||  ||||| ||||||    
T  10992911 taaatgcgtttcacatcggtttcatgatcttgaatgcgtctcgcatgatcttgcaatatcaaattcaattttgcaatcctttcaatcaattcaagaaagt 10993010  T
Q  257 tgacattaccataattatataatttaatttttt-gaaacctttaaaagacaagattaaaattaatttctctaaaggcccattttcaagtaaaatataatt 355  Q
    ||||||||| ||| | |||||||||| |||||| | ||   |  |||||||||| |||||||||||||     |||| ||||||||| ||||||  ||||    
T  10993011 tgacattacaatattgatataatttatttttttgggaagggtagaaagacaagaataaaattaatttc---gtaggctcattttcaactaaaatgaaatt 10993107  T
Q  356 agtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
     |||| ||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  10993108 tgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaatat 10993169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 185 - 416
Target Start/End: Complemental strand, 47185205 - 47184972
Alignment:
Q  185 catgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacattaccataattatataatttaat 284  Q
    |||||||| ||||||||| |||||| | ||||||||| || | || |||| ||  |||  ||||| ||||||||||||||  ||| | || ||||||  |    
T  47185205 catgaatgtgtctcacatgattttgtactatcaaattcaactatgcaatcatttcaatcaattcaagaaagttgacattattatattgatgtaatttgtt 47185106  T
Q  285 tttttgaaacctttaaaagacaagattaaaattaatttctcta-aaggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaattt 382  Q
    |||||| ||||||| |||||||||||||| |||||||||||||   || |||||||||| |||||||||||| |||| ||||| ||||||||||||||||    
T  47185105 tttttggaacctttgaaagacaagattaagattaatttctctagtgggtccattttcaactaaaatataatttgttttgttatgaaaattatcccaattt 47185006  T
Q  383 cttggataataaatatcagcaatatttttaatat 416  Q
     ||||||||||||||||| |||||||| ||||||    
T  47185005 attggataataaatatcaccaatatttgtaatat 47184972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 147 - 259
Target Start/End: Original strand, 11830316 - 11830428
Alignment:
Q  147 cacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttat 246  Q
    ||||||||||||||||||||||| ||  |||||||||||||||||| ||||||||  |||| ||||||||||||| ||||||| ||||||| ||||  ||    
T  11830316 cacatgatcctaaatgcgtctcacatcagtttcatgatcatgaatgtgtctcacaagatttagcattatcaaattcaattttgcaatccttttaatcaat 11830415  T
Q  247 tcacgaaagttga 259  Q
    ||| |||||||||    
T  11830416 tcaagaaagttga 11830428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 245 - 416
Target Start/End: Original strand, 11639916 - 11640089
Alignment:
Q  245 attcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaag 343  Q
    ||||| |||| ||||||||||  || | |||||||||| ||||||| || |||| |||||| | |||||  |||||||||| |  ||| ||||||||||     
T  11639916 attcaagaaaattgacattactgtattgatataatttatttttttggaatctttgaaagactatattaaggttaatttctcaagtaggtccattttcaac 11640015  T
Q  344 taaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||| ||||  ||| ||||| |||||||||||||||||||| ||||||||||||| | |||||||||||||    
T  11640016 taaaataaaatttattttgttatgaaaattatcccaatttcttgaataataaatatcatcgatatttttaatat 11640089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 164 - 416
Target Start/End: Original strand, 44663183 - 44663421
Alignment:
Q  164 gtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacatt 263  Q
    |||||| || ||||||||||| |||||| |||||| ||| || ||||| ||||||||||||||||| |||||||  |||  ||||| |||| |||||||     
T  44663183 gtctcacatcggtttcatgataatgaatacgtctcgcatgatcttgcaatatcaaatttaattttgcaatcctttcaatcaattcaagaaatttgacat- 44663281  T
Q  264 accataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaaaggcccattttcaagtaaaatataattagtttggt 363  Q
         ||||      |||  ||||||| ||||||  |||||||||||||||| ||||||   |  |||| ||||||||| |||||||||||| |||| ||    
T  44663282 -----aatt------tttttttttttgtaaccttagaaagacaagattaaaaataattt---tgtaggctcattttcaactaaaatataatttgttttgt 44663367  T
Q  364 tat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    | | ||||||||  |||||||||||||||||||||||| |||||| ||||||||    
T  44663368 tttgaaaattatttcaatttcttggataataaatatcaccaatatatttaatat 44663421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 266 - 416
Target Start/End: Original strand, 16876821 - 16876970
Alignment:
Q  266 cataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaaaggccc-attttcaagtaaaatataattagtttggtt 364  Q
    |||||| |||||||||||||||||| ||| ||| |||||||| ||||| |||||||||||||   | |  |||||||| |||||||| ||| |||| |||    
T  16876821 cataatgatataatttaattttttgcaacattttaaagacaacattaagattaatttctctagttgacttattttcaactaaaatattatttgttttgtt 16876920  T
Q  365 ataaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||| ||  ||||||||||||||||||||| | |||||| ||||||||    
T  16876921 ataaaattctc--aatttcttggataataaatatgaccaatatatttaatat 16876970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 256 - 416
Target Start/End: Complemental strand, 1698588 - 1698426
Alignment:
Q  256 ttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataat 354  Q
    |||||||||| ||| | |||||||||| ||| ||| || |||| |||||||||||||| |||||||| ||||  |  || |||||||| | ||||| |||    
T  1698588 ttgacattactatattgatataatttattttcttggaatctttcaaagacaagattaagattaatttatctagtaaacctattttcaacttaaatagaat 1698489  T
Q  355 tagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    | |||| ||||  ||||||||| |||||||||||||||||||||||| | |||||||||||||    
T  1698488 ttgttttgttaggaaaattatctcaatttcttggataataaatatcatcgatatttttaatat 1698426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 283 - 415
Target Start/End: Complemental strand, 53472263 - 53472130
Alignment:
Q  283 attttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaat 380  Q
    |||||||| ||||||| ||| ||| |||||| |||||||| | ||  |||| ||||||||| |||||||||||| |||| ||||| ||||||||| ||||    
T  53472263 attttttggaacctttgaaatacatgattaagattaatttatgtagtaggctcattttcaactaaaatataatttgttttgttattaaaattatctcaat 53472164  T
Q  381 ttcttggataataaatatcagcaatatttttaata 415  Q
    |||||||||||||||| ||| |||| |||||||||    
T  53472163 ttcttggataataaatttcaccaat-tttttaata 53472130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 345 - 416
Target Start/End: Complemental strand, 17147296 - 17147225
Alignment:
Q  345 aaaatataattagtttggttataaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||||||  ||| ||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  17147296 aaaatataatttattttgttatgaaattattccaatttcttggataataaatatcaccaatatttttaatat 17147225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 335 - 416
Target Start/End: Original strand, 10994164 - 10994246
Alignment:
Q  335 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||| |||||||||||| | || ||||| |||||||||||||||||||||||||||||||||  | |||||||||||||    
T  10994164 attttcaactaaaatataatttgctttgttatgaaaattatcccaatttcttggataataaatatcgtcgatatttttaatat 10994246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 284 - 400
Target Start/End: Complemental strand, 4127664 - 4127547
Alignment:
Q  284 ttttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttataaaattatcccaattt 382  Q
    ||||||||||||||| |||||||||||||| |||||||||| ||  |  |  |||||||| ||||| ||| || ||||| | | ||||||||| ||||||    
T  4127664 ttttttgaaacctttgaaagacaagattaagattaatttctgtagcaatctaattttcaactaaaaaatactttgtttgttaagaaaattatctcaattt 4127565  T
Q  383 cttggataataaatatca 400  Q
    ||||||||||||||||||    
T  4127564 cttggataataaatatca 4127547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 305 - 400
Target Start/End: Original strand, 23044880 - 23044977
Alignment:
Q  305 caagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatca 400  Q
    ||||||||| ||||||||||| |  |||||||||||||| |||||||||||| |||| ||||| |||||| |||||||||  ||||||||||||||||    
T  23044880 caagattaagattaatttctccagtaggcccattttcaactaaaatataatttgttttgttatgaaaattctcccaattttctggataataaatatca 23044977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 186 - 416
Target Start/End: Original strand, 3917989 - 3918228
Alignment:
Q  186 atgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacattaccataattatataatttaa-- 283  Q
    ||||||||||||| ||| || ||||||||||||||| |||| |  ||| |||  |||  ||||| ||||||||||||||| ||| | |||||||||||      
T  3917989 atgaatgcgtctcgcatgatcttgcattatcaaattcaattattcaattctttcaatcaattcaagaaagttgacattactatattgatataatttaatt 3918088  T
Q  284 ----ttttttgaaacctttaaaagacaagattaaaattaatttctc-taaaggcccattttcaagtaaaatataattagtttggttat-aaaattatccc 377  Q
        ||||||| || |||| |||||||| ||||| || ||||| || |  | ||  |||||||| ||||||| |||| |||| ||||| | |||||||||    
T  3918089 ttttttttttggaatctttgaaagacaatattaagataaatttatcttgtaagcatattttcaactaaaatagaatttgttttgttatgagaattatccc 3918188  T
Q  378 aa-tttcttggataataaatatcagcaatatttttaatat 416  Q
    || ||| |||||| |||||||||| ||| |||||||||||    
T  3918189 aacttttttggatgataaatatcaccaacatttttaatat 3918228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 335 - 416
Target Start/End: Original strand, 27941531 - 27941613
Alignment:
Q  335 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||| ||||||| |||| | || ||||| |||||||||||||||||||||||||||||||||  | |||||||||||||    
T  27941531 attttcaactaaaatagaatttgctttgttatgaaaattatcccaatttcttggataataaatatcttcgatatttttaatat 27941613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 416
Target Start/End: Original strand, 31884940 - 31885053
Alignment:
Q  305 caagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttataa-aattatcccaatttcttggataataaatatcagc 402  Q
    ||||||||| |||||||||||||  | |||||||||||| ||||||||||||  ||| ||||| | |||| |||||||||  ||||||||||||||||      
T  31884940 caagattaagattaatttctctagtatgcccattttcaactaaaatataatttattttgttatgagaattttcccaattttctggataataaatatcaca 31885039  T
Q  403 aatatttttaatat 416  Q
     |||||||||||||    
T  31885040 tatatttttaatat 31885053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 267 - 398
Target Start/End: Complemental strand, 40145621 - 40145491
Alignment:
Q  267 ataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggtta 365  Q
    ||||| ||||||||||||| |||| ||| ||||||| |||| ||||| |||||||| ||||  || |  ||||| || |||||||||||| |||| ||||    
T  40145621 ataatgatataatttaattctttggaacatttaaaaaacaacattaagattaatttttctattagacttattttgaactaaaatataatttgttttgtta 40145522  T
Q  366 taaaattatcccaatttcttggataataaatat 398  Q
    ||||||  | |||| ||||||||||||||||||    
T  40145521 taaaat--ttccaaattcttggataataaatat 40145491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 416
Target Start/End: Original strand, 6024740 - 6024862
Alignment:
Q  295 ctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttataaa-attatcccaatttcttggataat 392  Q
    ||||||||| ||||||||| |||||||| ||||  |||||||||||| | |||||||| ||| |||| ||||| || ||| |||||||||  ||||||||    
T  6024740 ctttaaaag-caagattaagattaatttttctagtaggcccattttctactaaaatattatttgttttgttatgaagattctcccaattttctggataat 6024838  T
Q  393 aaatatcagcaatatttttaatat 416  Q
    ||||||||   |||||||||||||    
T  6024839 aaatatcacatatatttttaatat 6024862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 335 - 416
Target Start/End: Complemental strand, 19157182 - 19157100
Alignment:
Q  335 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||| ||||||| |||| |||| ||||| ||||||||||  |||||||||||||||||||||  | |||||||||||||    
T  19157182 attttcaactaaaatagaatttgttttgttatgaaaattatcctcatttcttggataataaatatcgtcgatatttttaatat 19157100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 335 - 416
Target Start/End: Original strand, 53076983 - 53077065
Alignment:
Q  335 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||| ||||||| |||| | || ||||  |||||||||||||||||||||||||||||||||  | |||||||||||||    
T  53076983 attttcaactaaaatagaatttgctttgttacgaaaattatcccaatttcttggataataaatatcgtcgatatttttaatat 53077065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 333 - 413
Target Start/End: Complemental strand, 15760950 - 15760869
Alignment:
Q  333 ccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaa 413  Q
    |||||||||| ||||||| |||| | |  ||||| |||||||||||||||||||||||||||||||||  | ||||||||||    
T  15760950 ccattttcaactaaaataaaatttgctatgttatgaaaattatcccaatttcttggataataaatatcgtcgatatttttaa 15760869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 416
Target Start/End: Complemental strand, 25071732 - 25071650
Alignment:
Q  335 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||| ||||||| |||| | |  ||||| ||||||||| |||||||||||||||||||||||  | |||||||||||||    
T  25071732 attttcaactaaaatagaatttgctctgttatgaaaattatctcaatttcttggataataaatatcgtcgatatttttaatat 25071650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 75
Target Start/End: Complemental strand, 47185468 - 47185419
Alignment:
Q  28 tgtgaagtagactgcaattt--acacctaagaataataacaccaaaaaag 75  Q
    |||||||||||||| |||||  |||||||||||||||||||||| |||||    
T  47185468 tgtgaagtagactgaaattttgacacctaagaataataacaccagaaaag 47185419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 46947681 - 46947640
Alignment:
Q  175 gtttcatgatcatgaatgcgtctcacataattttgcattatc 216  Q
    ||||| |||||||||||||||||||||| || ||||||||||    
T  46947681 gtttcttgatcatgaatgcgtctcacatgatcttgcattatc 46947640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 416
Target Start/End: Complemental strand, 52448199 - 52448150
Alignment:
Q  367 aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||||  |||||||||||||||||||||||  | |||||||||||||    
T  52448199 aaaattatatcaatttcttggataataaatatcgtcgatatttttaatat 52448150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 131; Significance: 8e-68; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 159 - 416
Target Start/End: Original strand, 11648592 - 11648850
Alignment:
Q  159 aatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttg 258  Q
    ||||||||||| || ||||||||||||||||||| ||||| ||| |||||||||||||||||| ||||||| |||| || ||||  ||||| |||||||     
T  11648592 aatgcgtctcacatcggtttcatgatcatgaatgtgtctcgcatgattttgcattatcaaattcaattttgcaatcattttaatcaattcaagaaagtta 11648691  T
Q  259 acattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaaag-gcccattttcaagtaaaatataattag 357  Q
    || |||  ||||| ||||||||||||| |||| ||||||| |||||||||||| | |||||||||||||| | | |||||||||| |||||||||||| |    
T  11648692 accttagtataatgatataatttaattatttggaacctttgaaagacaagattgagattaatttctctaatgagtccattttcaactaaaatataatttg 11648791  T
Q  358 tttggttataaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||| |||||||||||||| ||||||||| |||||||||||||| |||||||||||||||    
T  11648792 ttttgttataaaattatctcaatttctttgataataaatatcaccaatatttttaatat 11648850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 159 - 416
Target Start/End: Original strand, 24190187 - 24190442
Alignment:
Q  159 aatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttg 258  Q
    |||| |||||| || || ||||||||| ||||||||||||  || || ||||| ||||| ||| ||||||| |||||||  |||  |||||  |||||||    
T  24190187 aatgtgtctcacatcggattcatgatcttgaatgcgtctcgtatgatcttgcaatatcatattcaattttgcaatcctttcaatccattcaaaaaagttg 24190286  T
Q  259 acattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaaaggcccattttcaagtaaaatataattagt 358  Q
    ||||||| ||| | |||||||||| |||||||||||| |  |||||||| ||||| ||||| |||     || | ||||||||| |||||||||||| ||    
T  24190287 acattacaatattgatataatttatttttttgaaaccatagaaagacaaaattaagattaacttcgt---agactcattttcaactaaaatataatttgt 24190383  T
Q  359 ttggttataaaa-ttatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    || ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  24190384 tttgttataaaaattatcccaatttcttggataataaatatcatcaatatttttaatat 24190442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 246 - 416
Target Start/End: Original strand, 9382150 - 9382322
Alignment:
Q  246 ttcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagt 344  Q
    |||| ||||||||||||||| ||| | || ||||||||||||||| ||||||| ||||| ||||||||||||||||| ||||| ||| |||||||||| |    
T  9382150 ttcaagaaagttgacattactatattgatgtaatttaattttttggaacctttgaaagaaaagattaaaattaatttttctaataggtccattttcaact 9382249  T
Q  345 aaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||||||| |||| ||||| |||||||||||||||  || |||| ||||||||| |||||||||||||||    
T  9382250 aaaatataatttgttttgttatgaaaattatcccaattcattagatagtaaatatcaccaatatttttaatat 9382322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 245 - 416
Target Start/End: Original strand, 28374489 - 28374660
Alignment:
Q  245 attcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaag 343  Q
    ||||| ||||||||| ||||| ||| | |||||||||||||||||  ||| ||||||| |||||||||| |||||||||||||  |  | |||||||||     
T  28374489 attcaagaaagttgaaattactatattgatataatttaatttttttgaacatttaaaaaacaagattaagattaatttctctagtaaactcattttcaac 28374588  T
Q  344 taaaatataattagtttggttataaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||||||||  ||||||||||||||||| | ||||||||| ||||||||||||| |||||||||||||||    
T  28374589 taaaatataatttatttggttataaaattattcaaatttcttgaataataaatatca-caatatttttaatat 28374660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 175 - 416
Target Start/End: Complemental strand, 9137780 - 9137541
Alignment:
Q  175 gtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacattaccataattat 274  Q
    |||||||||||||||||||||||| ||| || || || ||| ||||| ||||||| |||||||  |||  ||||| |||  |||||||||  ||| | ||    
T  9137780 gtttcatgatcatgaatgcgtctcgcatgatcttacaatattaaattcaattttgaaatcctttcaatcaattcaagaattttgacattataatattgat 9137681  T
Q  275 ataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaaaggcccattttcaagtaaaatataattagtttggttat-aaaatta 373  Q
    |||||| | ||||||  ||||||  |||||||||||||| ||||||   |    |||| ||||||||| |||||||||||| |||| ||||| |||||||    
T  9137680 ataattaattttttttgaaccttagaaagacaagattaagattaatacat----aggctcattttcaactaaaatataatttgttttgttatgaaaatta 9137585  T
Q  374 tcc-caatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||| |||||||||||||||||||||||| |||||||||||||||    
T  9137584 tccacaatttcttggataataaatatcaccaatatttttaatat 9137541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 275 - 416
Target Start/End: Original strand, 23232178 - 23232321
Alignment:
Q  275 ataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataatt-agtttggttataaaatt 372  Q
    |||||||||||||||| ||| ||| ||||| |||||||||||||||||||  |  |||| ||||||||| |||||||||||| | |||||||||||| ||    
T  23232178 ataatttaattttttggaacatttgaaagaaaagattaaaattaatttcttcagtaggctcattttcaattaaaatataatttattttggttataaagtt 23232277  T
Q  373 atcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||| ||||||||  ||||||||||||| |||||||||||||||    
T  23232278 atcctaatttcttcaataataaatatcaccaatatttttaatat 23232321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 273 - 416
Target Start/End: Complemental strand, 32073413 - 32073265
Alignment:
Q  273 atataatttaatt-ttttgaaacctttaaaagacaagattaaaattaatttctctaaag---gcccattttcaagtaaaatataattagtttggttataa 368  Q
    |||||||||| || ||||| ||||||| || ||||||||||| ||||||||||||||     | |||||||||| |||||||||||| |||| |||  ||    
T  32073413 atataatttatttattttggaacctttgaacgacaagattaagattaatttctctaatatgtgtccattttcaactaaaatataattcgttttgttgcaa 32073314  T
Q  369 a-attatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    | |||||| |||||||||||||||||||||||| |||||||||||||||    
T  32073313 agattatcacaatttcttggataataaatatcaccaatatttttaatat 32073265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 133 - 229
Target Start/End: Original strand, 23232079 - 23232175
Alignment:
Q  133 gagaacaatagacccacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttg 229  Q
    ||||| |||||  |||||||||||||||||||||||| || ||||| ||||||||||||| || |||||| ||| |||||||||||||| |||||||    
T  23232079 gagaagaatagggccacatgatcctaaatgcgtctcacatcggttttatgatcatgaatgtgtttcacatgattctgcattatcaaattcaattttg 23232175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 335 - 416
Target Start/End: Complemental strand, 1981685 - 1981603
Alignment:
Q  335 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||| ||||||| |||| | || ||||| |||||||||||||||||||||||||||||||||  |||||||||||||||    
T  1981685 attttcaactaaaatagaatttgctttgttatgaaaattatcccaatttcttggataataaatatcgtcaatatttttaatat 1981603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 335 - 416
Target Start/End: Complemental strand, 45117555 - 45117473
Alignment:
Q  335 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||| |||||||||||| | || ||||| |||||||||||||||||||||||||||||||||  | |||||||||||||    
T  45117555 attttcaactaaaatataatttgctttgttatgaaaattatcccaatttcttggataataaatatcgtcgatatttttaatat 45117473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 306 - 416
Target Start/End: Complemental strand, 28509370 - 28509258
Alignment:
Q  306 aagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagca 403  Q
    |||||||| |||||||| ||||  |||||||||||||| |||||||||||| |||| ||||| |||||| ||| |||||  ||||||||||||||||       
T  28509370 aagattaagattaatttttctagtaggcccattttcaactaaaatataatttgttttgttatgaaaattctcctaattttctggataataaatatcacat 28509271  T
Q  404 atatttttaatat 416  Q
    |||||||||||||    
T  28509270 atatttttaatat 28509258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 334 - 416
Target Start/End: Original strand, 4432086 - 4432169
Alignment:
Q  334 cattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||||| ||||||| |||| | || ||||| ||||||||||||||||||||||||||||||||   |||||||||||||||    
T  4432086 cattttcaactaaaataaaatttgctttgttatgaaaattatcccaatttcttggataataaatattgtcaatatttttaatat 4432169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 331 - 416
Target Start/End: Complemental strand, 16729823 - 16729737
Alignment:
Q  331 gcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||||||| ||||||| |||| | || ||||  |||||||||||||||||||||||||||||||||  | |||||||||||||    
T  16729823 gcccattttcaactaaaatagaatttgctttgttaagaaaattatcccaatttcttggataataaatatcgtcgatatttttaatat 16729737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 335 - 416
Target Start/End: Complemental strand, 31597611 - 31597529
Alignment:
Q  335 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||| ||||||| |||| | || ||||| |||||||||||||||||||||||||||||||||  | |||||||||||||    
T  31597611 attttcaactaaaatagaatttgctttgttatgaaaattatcccaatttcttggataataaatatcgtcgatatttttaatat 31597529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 416
Target Start/End: Original strand, 7972993 - 7973078
Alignment:
Q  332 cccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||||||| ||||||| |||| | || ||||| ||||||||||||||||||||||||| |||||||  | |||||||||||||    
T  7972993 cccattttcaactaaaatagaatttgctttgttatgaaaattatcccaatttcttggataaaaaatatcgtcgatatttttaatat 7973078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 300 - 416
Target Start/End: Original strand, 2879196 - 2879314
Alignment:
Q  300 aaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttataaa-attatcccaatttcttggataataaata 397  Q
    |||| ||||||||| |||||||| ||||  |||||||||||| | |||||||| ||| |||| ||||| || ||| |||||||||  |||||||||||||    
T  2879196 aaaggcaagattaagattaatttttctagtaggcccattttctactaaaatattatttgttttgttatgaagattctcccaattttctggataataaata 2879295  T
Q  398 tcagcaatatttttaatat 416  Q
    |||   |||||||||||||    
T  2879296 tcacatatatttttaatat 2879314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 335 - 416
Target Start/End: Complemental strand, 3762786 - 3762704
Alignment:
Q  335 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||| ||||||| |||| | || ||||| |||||||||||||||||||||||||||||||||    |||||||||||||    
T  3762786 attttcaactaaaatagaatttgctttgttatgaaaattatcccaatttcttggataataaatatcgtagatatttttaatat 3762704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 335 - 416
Target Start/End: Original strand, 6927561 - 6927643
Alignment:
Q  335 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||| |||||||||||| |||| ||||| |||||| |||||||||  ||||||||||||||||   |||||||||||||    
T  6927561 attttcaactaaaatataatttgttttgttatgaaaattctcccaattttctggataataaatatcacatatatttttaatat 6927643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 416
Target Start/End: Complemental strand, 40971534 - 40971449
Alignment:
Q  332 cccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||||||| ||||||| |||| | || || || ||||||||| |||||||||||||||||||||||  | |||||||||||||    
T  40971534 cccattttcaaataaaatagaatttgctttgtaatgaaaattatctcaatttcttggataataaatatcgtcgatatttttaatat 40971449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 367 - 416
Target Start/End: Original strand, 7263680 - 7263729
Alignment:
Q  367 aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||||| |||||||||||||||||||||||  | |||||||||||||    
T  7263680 aaaattatctcaatttcttggataataaatatcgtcgatatttttaatat 7263729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 235
Target Start/End: Complemental strand, 24682904 - 24682815
Alignment:
Q  147 cacatgatcctaaatgcgtctcaaattg-gtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatcc 235  Q
    ||||||||||||||||| | ||| || | |||||||||||||||||| ||||  ||| || ||||||||||||||| |||| || |||||    
T  24682904 cacatgatcctaaatgcatgtcacatcgtgtttcatgatcatgaatgtgtcttgcatcatcttgcattatcaaattcaattctgcaatcc 24682815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 332 - 416
Target Start/End: Complemental strand, 39906339 - 39906254
Alignment:
Q  332 cccattttcaagtaaaatataattagtttggttataaaa-ttatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||||||| ||||||| |||| | || ||||||||| |||| ||||||| |||||||||||||| |  | |||||||||||||    
T  39906339 cccattttcaactaaaatagaatttgctttgttataaaaattattccaatttattggataataaataacgtcgatatttttaatat 39906254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 961163 - 961243
Alignment:
Q  146 ccacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaatt 226  Q
    ||||||| ||||| |||| ||||| || |||||||||||||  |||||||| |||||| | ||| ||||||||||| ||||    
T  961163 ccacatggtcctacatgcatctcacatcggtttcatgatcacaaatgcgtcccacatattcttgtattatcaaattcaatt 961243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 300 - 366
Target Start/End: Original strand, 11994691 - 11994758
Alignment:
Q  300 aaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat 366  Q
    |||| ||| ||||| |||||||| ||||| ||||||||||||||||||||||| ||| |||| |||||    
T  11994691 aaaggcaatattaagattaatttttctaataggcccattttcaagtaaaatattattcgttttgttat 11994758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 416
Target Start/End: Original strand, 2807702 - 2807786
Alignment:
Q  333 ccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||||| |||||||||||| |||| ||| | || ||| || ||||||  |||||||||| |||||  ||||||||||||||    
T  2807702 ccattttcaactaaaatataatttgtttcgttgtgaagattctcacaattttctggataataattatcacaaatatttttaatat 2807786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 76
Target Start/End: Original strand, 11648101 - 11648148
Alignment:
Q  31 gaagtagactgcaattta--cacctaagaataataacaccaaaaaagt 76  Q
    ||||||||||| |||||   ||||||||||||||||||||||||||||    
T  11648101 gaagtagactgaaattttagcacctaagaataataacaccaaaaaagt 11648148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 124; Significance: 1e-63; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 146 - 416
Target Start/End: Original strand, 13597700 - 13597971
Alignment:
Q  146 ccacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataattta 245  Q
    ||||||| |||||||||||||||| ||  |||||||||||||||||| ||||| ||| |||||||||||||||||||||||||| ||||||| ||||  |    
T  13597700 ccacatgttcctaaatgcgtctcacatcagtttcatgatcatgaatgtgtctcgcatgattttgcattatcaaatttaattttgcaatccttttaatcaa 13597799  T
Q  246 ttcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaattt-ctctaaaggcccattttcaagt 344  Q
    || |  |||| ||| ||||| ||||| |||||||| ||||||||| | |||||||| ||||||||||| |||||||| ||    |||  ||||||||| |    
T  13597800 tttaaaaaagatgaaattactataatcatataattaaattttttggatcctttaaatgacaagattaatattaatttgcttagtaggttcattttcaact 13597899  T
Q  345 aaaatataattagtttggttataaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||||||| |||| ||||||||||||||||| ||||||||||||||||||| | |||||||||||||||    
T  13597900 aaaatataatttgttttgttataaaattatcccattttcttggataataaatatgaccaatatttttaatat 13597971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 146 - 416
Target Start/End: Original strand, 19091009 - 19091280
Alignment:
Q  146 ccacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataattta 245  Q
    |||||||||||||||||||||||  || |||||||||| | |||||||| ||| ||| || ||||||||||||||| ||||||  |||||||  |||  |    
T  19091009 ccacatgatcctaaatgcgtctcgcatcggtttcatgaacgtgaatgcgactcgcatgatcttgcattatcaaattcaatttttcaatcctttcaatcaa 19091108  T
Q  246 ttcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctcta-aaggcccattttcaagt 344  Q
    |||| |||| |||||||||| ||| | ||||||||| |||||||||||||||| ||||| |||||||| |||||||||||||  |||||||||||||| |    
T  19091109 ttcatgaaatttgacattactatattgatataattt-attttttgaaacctttgaaagataagattaagattaatttctctagtaggcccattttcaact 19091207  T
Q  345 aaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||||||| |||| ||||| |||||||| | |||||||| |||||||||||||| |||||||||||||||    
T  19091208 aaaatataatttgttttgttatgaaaattatacaaatttcttagataataaatatcaccaatatttttaatat 19091280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 245 - 416
Target Start/End: Complemental strand, 30387033 - 30386861
Alignment:
Q  245 attcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaag 343  Q
    ||||| ||||||||||||||| ||| | |||||||||||||||||| |||||||||||||||||||||| |||||||| ||||  | ||||||||| ||     
T  30387033 attcaagaaagttgacattactatattgatataatttaattttttggaacctttaaaagacaagattaagattaatttatctagtaagcccatttttaac 30386934  T
Q  344 taaaatataattagtttggttataaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||| | |||||||||||||    
T  30386933 taaaatataatttgttttgttataaaattatcctaatttcttggataataaatatcaccgatatttttaatat 30386861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 124 - 320
Target Start/End: Original strand, 31548966 - 31549162
Alignment:
Q  124 ttagcacccgagaacaatagacccacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaattta 223  Q
    ||||||||||||||||||||   ||||||||||||||||||||| | || ||||||||||||| ||||| || || ||| ||| |||||||||||||| |    
T  31548966 ttagcacccgagaacaatagggacacatgatcctaaatgcgtcttacatcggtttcatgatcacgaatgtgtttcgcatgattgtgcattatcaaattca 31549065  T
Q  224 attttgtaatccttataatttattcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaat 320  Q
    |||||| |||| || ||||  |||||  |||||||||||||| ||||| |||||||||||||||||| ||||||| ||| |||||||||||||||||    
T  31549066 attttgcaatctttttaatcaattcaaaaaagttgacattactataatgatataatttaattttttggaacctttgaaaaacaagattaaaattaat 31549162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 185 - 416
Target Start/End: Complemental strand, 25621678 - 25621446
Alignment:
Q  185 catgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacattaccataattatataatttaat 284  Q
    |||||||| ||||| ||| || ||||||||||||||| || | || ||| |||  |||  ||||| ||||||||||||||| ||  |||||||||||| |    
T  25621678 catgaatgtgtctcgcatgatcttgcattatcaaattcaactatgcaattctttcaatcaattcaagaaagttgacattactatttttatataatttatt 25621579  T
Q  285 tttttgaaacctttaaaagacaagattaaaattaatttctc-taaaggcccattttcaagtaaaatataattagtttggttataaaattatcccaatttc 383  Q
    ||||||||||||||||||||||||||||| |||||||| || |  ||| |||||||||| |||||||||||| |||| | ||| ||| | || ||||||     
T  25621578 tttttgaaacctttaaaagacaagattaagattaatttatcttgtaggtccattttcaactaaaatataatttgttttgctatgaaaatgtctcaattta 25621479  T
Q  384 ttggataataaatatcagcaatatttttaatat 416  Q
    ||||||||||| |||||  |||||| |||||||    
T  25621478 ttggataataagtatcactaatattgttaatat 25621446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 188 - 416
Target Start/End: Complemental strand, 14904261 - 14904031
Alignment:
Q  188 gaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacattaccataattatataatttaatttt 287  Q
    ||||| ||||| ||| || ||||||||||||||| ||   || |||||||  |||  ||||| ||||||||||||||| ||| | || ||||||| ||||    
T  14904261 gaatgtgtctcgcatgatcttgcattatcaaattcaaccatgcaatcctttcaatcaattcaagaaagttgacattactatattgatgtaatttattttt 14904162  T
Q  288 ttgaaacctttaaaagacaagattaaaattaatttctcta-aaggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttctt 385  Q
    ||| ||||||| ||||||||||||||||||||||| ||||  ||| | |||||||| |||||||||||| |||| || || |||||||||| ||||  ||    
T  14904161 ttgtaacctttgaaagacaagattaaaattaatttttctagtaggtctattttcaactaaaatataatttgttttgtcatgaaaattatcctaattcatt 14904062  T
Q  386 ggataataaatatcagcaatatttttaatat 416  Q
    |||||||||||||||  ||||||||||||||    
T  14904061 ggataataaatatcacgaatatttttaatat 14904031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 146 - 416
Target Start/End: Complemental strand, 6883278 - 6883005
Alignment:
Q  146 ccacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataattta 245  Q
    ||||||||||  ||||  || ||| |||||||||||||||| ||||| ||||||| | || || ||| |||||||| |||| |  |||||||  |||  |    
T  6883278 ccacatgatctcaaatatgtttcacattggtttcatgatcaagaatgtgtctcacgtgatcttccataatcaaattcaattctagaatcctttcaatcaa 6883179  T
Q  246 ttcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctcta-aaggcccattttcaagt 344  Q
    |||| ||||||||||||||| |||   || |||||| |||||||| ||||||||||| |||||||||| ||||||||||| |  ||||   ||||||| |    
T  6883178 ttcaagaaagttgacattactatatcgatgtaattt-attttttggaacctttaaaaaacaagattaagattaatttctcaagtaggcatgttttcaact 6883080  T
Q  345 aaaatataa--ttagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||||  ||  ||| ||||| ||||||||| |||||||||||||||||| ||||| |||||||||||||||    
T  6883079 aaaatataattttttttttgttatgaaaattatctcaatttcttggataataagtatcaccaatatttttaatat 6883005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 245 - 416
Target Start/End: Original strand, 38566131 - 38566296
Alignment:
Q  245 attcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaaaggcccattttcaagt 344  Q
    ||||| |||| |||||||||| ||| | |||||||||   |||||||||||||  |||||||||||||| ||||||||| ||  |||| || |||||| |    
T  38566131 attcaagaaatttgacattacaatattgatataattt---tttttgaaaccttagaaagacaagattaagattaatttc-ct--aggctca-tttcaact 38566223  T
Q  345 aaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  38566224 aaaatataatttgttttgttatgaaaattatcccaatttcttggataataaatatcaccaatatttttaatat 38566296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 262 - 414
Target Start/End: Complemental strand, 9057561 - 9057409
Alignment:
Q  262 ttaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctcta-aaggcccattttcaagtaaaatataattagttt 360  Q
    |||||||||| |||||||||||||||||| ||||||| |||||||| ||||| |||||||||||||  |  |  || ||||| |||||||||||| ||||    
T  9057561 ttaccataatgatataatttaattttttggaacctttgaaagacaatattaagattaatttctctagtaaacttatattcaattaaaatataatttgttt 9057462  T
Q  361 ggttataaaattatcccaatttcttggataataaatatcagcaatatttttaat 414  Q
     | |||||||||||| |||||||||||||||||||||| | |||||| ||||||    
T  9057461 tg-tataaaattatctcaatttcttggataataaatatgaccaatatatttaat 9057409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 245 - 416
Target Start/End: Complemental strand, 10023090 - 10022917
Alignment:
Q  245 attcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctcta-aaggcccattttcaag 343  Q
    ||||| ||||||||||||||  |||   |||||||||  ||||||||||||||||||||||| |||||| |||||||||||||  |   ||| ||||||     
T  10023090 attcaagaaagttgacattattatatagatataatttgtttttttgaaacctttaaaagacatgattaagattaatttctctagtaaaaccactttcaac 10022991  T
Q  344 taaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||||| || |||| ||||| ||||||||| |||||||||||||||||||||||  |||||||||| ||||    
T  10022990 taaaatatattttgttttgttatgaaaattatctcaatttcttggataataaatatccccaatattttttatat 10022917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 165 - 416
Target Start/End: Original strand, 11199129 - 11199382
Alignment:
Q  165 tctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacatta 264  Q
    ||||| || |||||||| || |||| || || |||||| || ||| ||||||||||| |||| |  |||||||  |||  || || |||| |||||||||    
T  11199129 tctcacatcggtttcataatgatgagtgtgtttcacatgatcttgaattatcaaattcaattctacaatcctttcaatcaatacaagaaaattgacatta 11199228  T
Q  265 ccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctcta-aaggcccattttcaagtaaaatataattag-tttgg 362  Q
    | ||| | |||| ||||| |||||||||| |||| ||| |||||||||| |||||||||||||  | |||||||||||| ||||||| |||| | ||||     
T  11199229 ctatattgatatgatttatttttttgaaatctttgaaaaacaagattaagattaatttctctagtatgcccattttcaactaaaatagaatttgttttgc 11199328  T
Q  363 ttataaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||  ||||| ||| |||||||||| ||||||||||||| | |||||||||||||    
T  11199329 tttgaaaatcatctcaatttcttgcataataaatatcatcgatatttttaatat 11199382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 306 - 416
Target Start/End: Original strand, 7880344 - 7880456
Alignment:
Q  306 aagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagca 403  Q
    |||||||| |||||||||||||  |||||||||||||| |||||||||||| |||| ||||| |||||| |||||||||  ||||||||||||||||       
T  7880344 aagattaagattaatttctctagtaggcccattttcaactaaaatataatttgttttgttatgaaaattctcccaattttctggataataaatatcacat 7880443  T
Q  404 atatttttaatat 416  Q
    |||||||||||||    
T  7880444 atatttttaatat 7880456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 175 - 412
Target Start/End: Original strand, 38422792 - 38423029
Alignment:
Q  175 gtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacattaccataattat 274  Q
    |||||| ||||||||||| ||||||||| || ||||||||||||||| |||| |   ||||||  |||  || || |||| |||||| ||| ||| | ||    
T  38422792 gtttcacgatcatgaatgtgtctcacatgatcttgcattatcaaattcaattctacgatcctttcaatcaatccaagaaaattgacactactatattgat 38422891  T
Q  275 ataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttataaa-att 372  Q
    |||||||| ||||||| | ||| |||| || |||||| | ||| ||||||| |  | || ||||||||| |||||||| ||| |||| ||||| || |||    
T  38422892 ataattta-ttttttggatcctctaaa-gaaaagattgagatttatttctcaagtatgctcattttcaactaaaatatcatttgttttgttatgaagatt 38422989  T
Q  373 atcccaatttcttggataataaatatcagcaatattttta 412  Q
     || |||||||||||||||||||||||| |||||||||||    
T  38422990 ctctcaatttcttggataataaatatcatcaatattttta 38423029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 175 - 416
Target Start/End: Original strand, 41302303 - 41302544
Alignment:
Q  175 gtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagtt-gacattaccataatta 273  Q
    |||||||||||||||||| |||||  || || ||| | ||| ||||| ||||||  |||||||  |||  |||||  ||| || |||||| | ||| | |    
T  41302303 gtttcatgatcatgaatgtgtctcgtatgatcttgtaatattaaattcaattttacaatcctttcaatcaattcaataaaatttgacattgcgatattga 41302402  T
Q  274 tataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaaaggcccattttc-aagtaaaatataattagtttggttat-aaaat 371  Q
    ||||||||| ||||||| || |||  |||||||||||||| || ||||||     |||| ||||||  || |||||||||||| |||| ||||| |||||    
T  41302403 tataatttatttttttggaatcttagaaagacaagattaagatcaatttcgt---aggctcatttttgaactaaaatataatttgttttgttatgaaaat 41302499  T
Q  372 tatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||||||| ||||||||||||||||| |||||||| ||||||    
T  41302500 tatcccaattttttggataataaatatcaacaatatttgtaatat 41302544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 164 - 416
Target Start/End: Complemental strand, 24484734 - 24484483
Alignment:
Q  164 gtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacatt 263  Q
    |||||| || |||||||| || ||||||||||||| | | || ||||| ||||||||| ||||||| ||| |||  ||   ||||| |||| ||||||||    
T  24484734 gtctcacatcggtttcattattatgaatgcgtctcgcttgatcttgcaatatcaaattcaattttgcaatgctttcaaccaattcaagaaatttgacatt 24484635  T
Q  264 accataattatataattta---attttttgaaacctttaaaagacaagattaaaattaatttctctaaaggcccattttcaagtaaaatataattagttt 360  Q
    || ||| | ||||||||||   |||||||  ||||    |||||||||||||| ||||||||   |   | | ||||||||| |||||||||||| ||||    
T  24484634 acaatattgatataatttagtaatttttt--aaccacagaaagacaagattaagattaattttgtt---gcctcattttcaactaaaatataatttgttt 24484540  T
Q  361 ggttata-aaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
     |||||  |||||||  ||||||||||||||||||||||||  ||||||||||||||    
T  24484539 tgttatgtaaattatttcaatttcttggataataaatatcacaaatatttttaatat 24484483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 335 - 416
Target Start/End: Complemental strand, 33054862 - 33054780
Alignment:
Q  335 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||| |||||||||||| |||| ||||| |||||||||  ||||| ||||||||||||||||| |||||||||||||||    
T  33054862 attttcaactaaaatataatttgttttgttatgaaaattatcataatttattggataataaatatcaccaatatttttaatat 33054780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 305 - 416
Target Start/End: Complemental strand, 19678139 - 19678026
Alignment:
Q  305 caagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttataa-aattatcccaatttcttggataataaatatcagc 402  Q
    ||||||||| |||||||||||||  || ||||||||||| |||||||||||| |||| ||||| | |||| |||||||||  ||||||||||||||||      
T  19678139 caagattaagattaatttctctagtagacccattttcaactaaaatataatttgttttgttatgagaattctcccaattttctggataataaatatcaca 19678040  T
Q  403 aatatttttaatat 416  Q
     |||||||||||||    
T  19678039 tatatttttaatat 19678026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 305 - 416
Target Start/End: Complemental strand, 29303287 - 29303174
Alignment:
Q  305 caagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttataa-aattatcccaatttcttggataataaatatcagc 402  Q
    ||||||||| |||||||||||||  |||||||||||||| |||||||||||| |||| ||| | | |||| |||||||||  ||||||||||||||||      
T  29303287 caagattaagattaatttctctagtaggcccattttcaactaaaatataatttgttttgttcttagaattctcccaattttctggataataaatatcaca 29303188  T
Q  403 aatatttttaatat 416  Q
     |||||||||||||    
T  29303187 tatatttttaatat 29303174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 234
Target Start/End: Original strand, 43673105 - 43673191
Alignment:
Q  149 catgatcctaaatgcgtctcaaattg-gtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatc 234  Q
    ||||||| |||||| |||||| |||| |||||||||||| ||||| |||| |||| || ||||||||||||||| ||||||||||||    
T  43673105 catgatcgtaaatgtgtctcacattgtgtttcatgatcaagaatgtgtcttacatgatcttgcattatcaaattcaattttgtaatc 43673191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 416
Target Start/End: Original strand, 22575996 - 22576081
Alignment:
Q  332 cccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||||||| ||||||| |||| | || ||||| |||||||||||||||| ||||||||||||||||  | |||||||||||||    
T  22575996 cccattttcaactaaaatagaatttgctttgttatgaaaattatcccaattttttggataataaatatcgtcgatatttttaatat 22576081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 416
Target Start/End: Original strand, 41422923 - 41422972
Alignment:
Q  367 aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  41422923 aaaattatcccagtttcttggataataaatatcaccaatatttttaatat 41422972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 416
Target Start/End: Original strand, 41825976 - 41826061
Alignment:
Q  332 cccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||||||| ||||||| |||| |||| || || ||||||||| |||||||||||||||||||||||  | |||||||||||||    
T  41825976 cccattttcaaataaaatagaatttgttttgtaatgaaaattatctcaatttcttggataataaatatcgtcgatatttttaatat 41826061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 300 - 416
Target Start/End: Original strand, 18781161 - 18781279
Alignment:
Q  300 aaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttataaa-attatcccaatttcttggataataaata 397  Q
    |||| ||||||||| |||||||| ||||  |||||||||||| | |||||||| ||| |||| ||||| || ||| |||||||||  |||||||||||||    
T  18781161 aaaggcaagattaagattaatttttctagtaggcccattttctactaaaatattatttgttttgttatgaagattctcccaattttctggataataaata 18781260  T
Q  398 tcagcaatatttttaatat 416  Q
    |||   |||||||||||||    
T  18781261 tcacatatatttttaatat 18781279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 276 - 391
Target Start/End: Original strand, 41422808 - 41422921
Alignment:
Q  276 taatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaaaggcccattttcaagtaaaatataattagtttggttat-aaaattat 374  Q
    ||||||| ||||||| ||||||  ||| |||||||||  |||||||||   | |||| ||||||||| ||||||||||||  ||| ||||| ||||||||    
T  41422808 taatttatttttttggaaccttagaaatacaagattatgattaatttc---ataggctcattttcaactaaaatataatttattttgttatgaaaattat 41422904  T
Q  375 cccaatttcttggataa 391  Q
     ||||||||||||||||    
T  41422905 tccaatttcttggataa 41422921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 335 - 416
Target Start/End: Original strand, 44314058 - 44314140
Alignment:
Q  335 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||| ||||||| |||| | || ||||| ||||||||| |||||||||||||||||||||||  | |||||||||||||    
T  44314058 attttcaactaaaatagaatttgctttgttatgaaaattatctcaatttcttggataataaatatcgtcgatatttttaatat 44314140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 335 - 416
Target Start/End: Original strand, 44322237 - 44322319
Alignment:
Q  335 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||| ||||||| |||| | || ||||| ||||||||| |||||||||||||||||||||||  | |||||||||||||    
T  44322237 attttcaactaaaatagaatttgctttgttatgaaaattatctcaatttcttggataataaatatcgtcgatatttttaatat 44322319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 335 - 416
Target Start/End: Original strand, 45277506 - 45277588
Alignment:
Q  335 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||| |||||||||||| |||| ||||| |||||| |||||||||  ||||||||||||||||   |||||||||||||    
T  45277506 attttcaactaaaatataatttgttttgttatgaaaattctcccaattttctggataataaatatcacatatatttttaatat 45277588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 416
Target Start/End: Complemental strand, 2554148 - 2554063
Alignment:
Q  332 cccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||||||| ||||||| |||| | || || || ||||||||| |||||||||||||||||||||||  | |||||||||||||    
T  2554148 cccattttcaaataaaatagaatttgctttgtaatgaaaattatctcaatttcttggataataaatatcgtcgatatttttaatat 2554063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 416
Target Start/End: Original strand, 27861833 - 27861918
Alignment:
Q  332 cccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||||||| ||||||| |||| | || ||||| |||||||| |||||||||||||||||||||||   | |||||||||||||    
T  27861833 cccattttcaactaaaatagaatttgctttgttatgaaaattattccaatttcttggataataaatattgtcgatatttttaatat 27861918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 300 - 416
Target Start/End: Complemental strand, 2565737 - 2565619
Alignment:
Q  300 aaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttataaa-attatcccaatttcttggataataaata 397  Q
    |||| ||| ||||| |||||||| ||||  |||||||||||| | |||||||| ||| |||| ||||| || ||| |||||||||  |||||||||||||    
T  2565737 aaaggcaaaattaagattaatttttctagtaggcccattttctactaaaatattatttgttttgttatgaagattctcccaattttctggataataaata 2565638  T
Q  398 tcagcaatatttttaatat 416  Q
    |||   |||||||||||||    
T  2565637 tcacatatatttttaatat 2565619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 416
Target Start/End: Original strand, 33015208 - 33015290
Alignment:
Q  335 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||| ||||||| |||| | || ||||| ||||||||||| |||| ||||||||||||||||  | |||||||||||||    
T  33015208 attttcaactaaaatagaatttgctttgttatgaaaattatccccatttattggataataaatatcgtcgatatttttaatat 33015290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 367 - 416
Target Start/End: Complemental strand, 19685849 - 19685800
Alignment:
Q  367 aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||||||||||||||||||||||||||||  | |||| ||||||||    
T  19685849 aaaattatcccaatttcttggataataaatatcgtcgatatgtttaatat 19685800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 400
Target Start/End: Original strand, 90308 - 90410
Alignment:
Q  300 aaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaata 397  Q
    |||| ||| ||||| |||||||| ||||| |||||||||||||| |||||||| ||| |||| ||||| || ||| | |||||||  ||||||| |||||    
T  90308 aaaggcaatattaagattaatttttctaataggcccattttcaactaaaatattattcgttttgttatgaagattcttccaattttctggataacaaata 90407  T
Q  398 tca 400  Q
    |||    
T  90408 tca 90410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 375
Target Start/End: Original strand, 25416047 - 25416117
Alignment:
Q  307 agattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatc 375  Q
    ||||||| |||||||||||||| ||| |||||||||| |||||||||||| | || ||||| |||||||||    
T  25416047 agattaagattaatttctctaataggtccattttcaactaaaatataatttgctttgttatcaaaattatc 25416117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 98
Target Start/End: Original strand, 31548851 - 31548920
Alignment:
Q  31 gaagtagactgcaattta--cacctaagaataataacaccaaaaaagtttacattactaaacgcgtctca 98  Q
    ||||||||||| |||||   |||| |||||||||||||| ||||||||| |||||||||||  |||||||    
T  31548851 gaagtagactgaaattttaccaccaaagaataataacacaaaaaaagttgacattactaaattcgtctca 31548920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 117; Significance: 2e-59; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 153 - 416
Target Start/End: Original strand, 41509027 - 41509290
Alignment:
Q  153 atcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacga 252  Q
    ||||||||||||||||| || |||||||||||| ||||   ||||| ||| ||||| |||||||||||| |||||||||||| || ||||  ||||| ||    
T  41509027 atcctaaatgcgtctcatatcggtttcatgatcgtgaacatgtctcgcatgattttccattatcaaattcaattttgtaatcattttaata-attcaaga 41509125  T
Q  253 aagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatat 351  Q
    ||||||||||||| || || |||||||||||||||||| ||||||| ||| | |  ||||| |||||||||||||| ||||  |||||||| ||||||||    
T  41509126 aagttgacattactattatgatataatttaattttttggaacctttgaaaaagaccattaagattaatttctctaataggcagattttcaactaaaatat 41509225  T
Q  352 aattagtttggttataaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||| |||| ||||||||||| || |||||||||||||||||||||| | |||||||||||||||    
T  41509226 aatttgtttagttataaaattgtctcaatttcttggataataaatattaccaatatttttaatat 41509290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 147 - 416
Target Start/End: Original strand, 10373196 - 10373468
Alignment:
Q  147 cacatgatcctaaatgcgtctcaaattggtttcat-gatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataattta 245  Q
    ||||| ||||||||||| ||||| ||  ||||||  |||||||||| |||||| ||| |||||||||||| ||||| ||||||| |||||||  |||  |    
T  10373196 cacattatcctaaatgcatctcatatcagtttcaacgatcatgaatacgtctcgcatgattttgcattattaaattcaattttgcaatcctttaaatcaa 10373295  T
Q  246 ttcacgaaagttgacattaccataattatataatttaa-ttttttgaaacctttaaaagacaagattaaaattaatttctcta-aaggcccattttcaag 343  Q
    |||| ||||||||||||||  ||||| ||||||||||| ||||||| || ||||||| |||||||||||||||||||| ||||  ||| ||||||||||     
T  10373296 ttcaagaaagttgacattattataatgatataatttaatttttttggaagctttaaatgacaagattaaaattaatttttctagtaggtccattttcaac 10373395  T
Q  344 taaaatataattagtttggttataaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||||||| ||||  ||||||||||||| |||||||||| ||||| ||||| | |||||||||||||||    
T  10373396 taaaatataatttgttttattataaaattatctcaatttcttgtataatgaatatgaccaatatttttaatat 10373468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 245 - 416
Target Start/End: Complemental strand, 10142323 - 10142150
Alignment:
Q  245 attcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctcta-aaggcccattttcaag 343  Q
    ||||| ||||||||||||||| ||| | || ||||||| ||||||| ||||||||||||| |||||||| |||||||||||||  || ||||||||||||    
T  10142323 attcaagaaagttgacattactatattgatgtaatttatttttttgcaacctttaaaagataagattaagattaatttctctagtagacccattttcaag 10142224  T
Q  344 taaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||||||| |||| ||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  10142223 taaaatataatttgttttgttatgaaaattatcccaatttattggataataaatatcaccaatatttttaatat 10142150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 159 - 416
Target Start/End: Original strand, 1843000 - 1843255
Alignment:
Q  159 aatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttg 258  Q
    |||| |||||| || | |||||||||| |||||||||||| ||| || ||||| ||||| ||| ||||||| | || ||  |||  ||||| ||||||||    
T  1843000 aatgtgtctcacatcgatttcatgatcttgaatgcgtctcgcatgatcttgcaatatcatattcaattttgcagtcttttcaatcaattcaagaaagttg 1843099  T
Q  259 acattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaaaggcccattttcaagtaaaatataattagt 358  Q
    ||||||| ||| |||||||||||| ||||||| ||||||  |||||||||||||| |||||||||   | |||| |||||||||  ||||||||||| ||    
T  1843100 acattacaatatttatataatttatttttttggaaccttagaaagacaagattaagattaatttc---ataggctcattttcaacaaaaatataatttgt 1843196  T
Q  359 ttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    || ||||| ||||||||||||||||||| |||||| ||||||  |||||||||||||||    
T  1843197 tttgttatgaaaattatcccaatttcttagataatgaatatctccaatatttttaatat 1843255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 159 - 416
Target Start/End: Original strand, 9921694 - 9921948
Alignment:
Q  159 aatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttg 258  Q
    ||||||||||| || |||||||||||| |||||  ||||| ||| || ||||| ||||| ||| ||||||| |||||||  |||  |||||  ||||||     
T  9921694 aatgcgtctcacatcggtttcatgatcttgaatatgtctcgcatgatcttgcaatatcatattcaattttgaaatcctttaaatcaattcaa-aaagttt 9921792  T
Q  259 acattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaaaggcccattttcaagtaaaatataattagt 358  Q
    ||||||| ||| | |||||||||| | ||||||||||||  |||||||||||||| |||||||||   | |||| ||||||||| |||||||||||| ||    
T  9921793 acattacaatattgatataatttattattttgaaaccttagaaagacaagattaagattaatttc---ataggctcattttcaactaaaatataatttgt 9921889  T
Q  359 ttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||  |||  |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  9921890 tttattacgaaaattatcccaatttcttggataataaatatcatcaatatttttaatat 9921948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 165 - 416
Target Start/End: Complemental strand, 52459276 - 52459023
Alignment:
Q  165 tctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacatta 264  Q
    ||||| ||||||||||| || || |||| || |||||| || ||||||||||||||| |||| || |||||||   ||  | ||| ||||||||||||||    
T  52459276 tctcacattggtttcataatgataaatgtgtttcacatgatcttgcattatcaaattcaattctgcaatcctttctataaagtcaagaaagttgacatta 52459177  T
Q  265 ccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggt 363  Q
    |  || | |||||||||| ||||||| || |||| ||||||||||||||  |||||||||||   |||||||||||||| ||||||| |||| |||| ||    
T  52459176 ctgtattgatataatttatttttttggaatctttgaaagacaagattaaggttaatttctctggtaggcccattttcaactaaaatagaatttgttttgt 52459077  T
Q  364 tat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||| |||| ||||||||||||||||||||||||||||| | |||||||||||||    
T  52459076 tatgaaaaatatcccaatttcttggataataaatatcatcgatatttttaatat 52459023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 165 - 416
Target Start/End: Complemental strand, 52460533 - 52460280
Alignment:
Q  165 tctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacatta 264  Q
    ||||| ||||||||||| || || |||| || |||||| || ||||||||||||||| |||| || |||||||   ||  | ||| ||||||||||||||    
T  52460533 tctcacattggtttcataatgataaatgtgtttcacatgatcttgcattatcaaattcaattctgcaatcctttctataaagtcaagaaagttgacatta 52460434  T
Q  265 ccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggt 363  Q
    |  || | |||||||||| ||||||| || |||| ||||||||||||||  |||||||||||   |||||||||||||| ||||||| |||| |||| ||    
T  52460433 ctgtattgatataatttatttttttggaatctttgaaagacaagattaaggttaatttctctggtaggcccattttcaactaaaatagaatttgttttgt 52460334  T
Q  364 tat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||| |||| ||||||||||||||||||||||||||||| | |||||||||||||    
T  52460333 tatgaaaaatatcccaatttcttggataataaatatcatcgatatttttaatat 52460280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 245 - 411
Target Start/End: Complemental strand, 21320192 - 21320025
Alignment:
Q  245 attcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaag 343  Q
    ||||| ||||||||||||||| ||| |  ||||||||||||||||| ||||||| ||| | |||||||| |||||||| ||||  | ||||||||||||     
T  21320192 attcaagaaagttgacattactatattggtataatttaattttttggaacctttgaaaaataagattaagattaatttatctagtaagcccattttcaac 21320093  T
Q  344 taaaatataattagtttggttataaaattatcccaatttcttggataataaatatcagcaatattttt 411  Q
    |||||||||||| |||| ||||||||||||||| ||||| |||| |||||||||||| || |||||||    
T  21320092 taaaatataatttgttttgttataaaattatcctaatttattggttaataaatatcaccattattttt 21320025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 284 - 416
Target Start/End: Original strand, 42512194 - 42512328
Alignment:
Q  284 ttttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatt 381  Q
    ||||||||||||||| |||||||||||||| |||||||||| ||  |||  ||||||||| |||||||||||| |||| ||||| |||||||||||||||    
T  42512194 ttttttgaaacctttgaaagacaagattaagattaatttctttagtaggttcattttcaactaaaatataatttgttttgttatgaaaattatcccaatt 42512293  T
Q  382 tcttggataataaatatcagcaatatttttaatat 416  Q
    | ||||||||||||||||  |||||||||||||||    
T  42512294 tattggataataaatatccccaatatttttaatat 42512328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 262 - 416
Target Start/End: Original strand, 29282952 - 29283107
Alignment:
Q  262 ttaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagttt 360  Q
    |||||||||| |||||||||||||||||| ||||||| ||| |||| ||||| |||||||||||||  |  |  || ||||| ||||||||||||  |||    
T  29282952 ttaccataatgatataatttaattttttggaacctttgaaaaacaatattaagattaatttctctagtaaacttatattcaattaaaatataatttattt 29283051  T
Q  361 ggttataaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
     |||||||||||||| |||||||||||||||||||||| | |||||| ||||||||    
T  29283052 tgttataaaattatctcaatttcttggataataaatattaccaatatatttaatat 29283107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 186 - 398
Target Start/End: Original strand, 24611216 - 24611430
Alignment:
Q  186 atgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacattaccataattatataatttaatt 285  Q
    ||||||| || |||||| || || |||||||||||| |||| || ||||| |  |||  ||||| ||||||||||| ||| ||| | ||| |||||| ||    
T  24611216 atgaatgtgtgtcacatgatcttccattatcaaattcaattctgcaatcccttcaatcaattcaagaaagttgacaatactatattaataaaatttattt 24611315  T
Q  286 ttttgaaacctttaaaagacaagattaaaattaatttctcta-aaggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttc 383  Q
    ||||| || |||| ||||||||||||||  ||||||| ||||  ||||| |||||||| ||||||| |||| |||| ||||| ||||||||| |||||||    
T  24611316 ttttggaatctttgaaagacaagattaaggttaatttttctagtaggccaattttcaactaaaatagaatttgttttgttatgaaaattatctcaatttc 24611415  T
Q  384 ttggataataaatat 398  Q
    |||||||||||||||    
T  24611416 ttggataataaatat 24611430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 300 - 416
Target Start/End: Complemental strand, 13957375 - 13957257
Alignment:
Q  300 aaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaata 397  Q
    |||||||||||||| |||| ||||||||  ||| | |||||||| |||||||||||| |||| ||||  |||||||||||||||| ||||||||||||||    
T  13957375 aaagacaagattaagattagtttctctagtaggtctattttcaactaaaatataatttgttttgttacgaaaattatcccaatttattggataataaata 13957276  T
Q  398 tcagcaatatttttaatat 416  Q
    |||  ||||||||| ||||    
T  13957275 tcactaatatttttcatat 13957257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 305 - 416
Target Start/End: Complemental strand, 51337762 - 51337649
Alignment:
Q  305 caagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagc 402  Q
    ||||||||| |||||||||||    |||||||||||||| |||||||||||| |||| ||||| |||||| ||||||||| |||||||||||||||||      
T  51337762 caagattaagattaatttctccggtaggcccattttcaactaaaatataatttgttttgttatgaaaattctcccaattttttggataataaatatcaca 51337663  T
Q  403 aatatttttaatat 416  Q
     |||||||||||||    
T  51337662 tatatttttaatat 51337649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 309 - 410
Target Start/End: Original strand, 3665451 - 3665554
Alignment:
Q  309 attaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaata 406  Q
    ||||| |||||||||||||| |||| ||||||||| ||||||| |||| |||| ||||| ||||||||| |||||||||| ||||||||||||| | |||    
T  3665451 attaagattaatttctctaataggctcattttcaactaaaatagaatttgttttgttatgaaaattatctcaatttcttgaataataaatatcatcgata 3665550  T
Q  407 tttt 410  Q
    ||||    
T  3665551 tttt 3665554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 335 - 416
Target Start/End: Original strand, 10095037 - 10095119
Alignment:
Q  335 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||| ||||||| |||| | || ||||| |||||||||||||||||||||||||||||||||  |||||||||||||||    
T  10095037 attttcaattaaaatagaatttgctttgttatgaaaattatcccaatttcttggataataaatatcgtcaatatttttaatat 10095119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 329 - 416
Target Start/End: Original strand, 9900071 - 9900159
Alignment:
Q  329 aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||| ||||||||| |||||||||||| ||||  |||| ||||||||||||||||||| |||  ||||||||| |||||||||||||||    
T  9900071 aggctcattttcaactaaaatataattcgtttcattatgaaaattatcccaatttcttagatggtaaatatcaccaatatttttaatat 9900159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 252 - 394
Target Start/End: Complemental strand, 25201183 - 25201039
Alignment:
Q  252 aaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctct-aaaggcccattttcaagtaaaata 350  Q
    |||||||||||||| ||| | |||||||||| ||||||| ||| ||| |||||||||||||| ||||| |||| |    || | ||||| || |||||||    
T  25201183 aaagttgacattactatattgatataatttatttttttggaacttttgaaagacaagattaagattaaattctatggttggtctatttttaactaaaata 25201084  T
Q  351 taattagtttggttat-aaaattatcccaatttcttggataataa 394  Q
    |  || |||| ||||| ||||||||||||||||||||||||||||    
T  25201083 tcttttgttttgttatgaaaattatcccaatttcttggataataa 25201039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 146 - 221
Target Start/End: Complemental strand, 25201272 - 25201197
Alignment:
Q  146 ccacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatt 221  Q
    |||||||||||||||| ||||||| ||   ||||||||||||||||||||||||||| ||  ||||||||||||||    
T  25201272 ccacatgatcctaaatacgtctcacatcattttcatgatcatgaatgcgtctcacatgatcatgcattatcaaatt 25201197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 416
Target Start/End: Original strand, 28143439 - 28143552
Alignment:
Q  305 caagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttataa-aattatcccaatttcttggataataaatatcagc 402  Q
    ||||||||| |||||||||||||  ||  |||||||||| |||||||||||| |||| ||||| | |||| |||||||||  ||||||||||||||||      
T  28143439 caagattaagattaatttctctagtagatccattttcaactaaaatataatttgttttgttatgagaattctcccaattttctggataataaatatcaca 28143538  T
Q  403 aatatttttaatat 416  Q
     |||||||||||||    
T  28143539 tatatttttaatat 28143552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 416
Target Start/End: Original strand, 39480263 - 39480348
Alignment:
Q  332 cccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||||||| ||||||| |||| | || ||||| ||||||||||||||||||||||||| |||||||  | |||||||||||||    
T  39480263 cccattttcaactaaaatagaatttgctttgttatgaaaattatcccaatttcttggataaaaaatatcgtcgatatttttaatat 39480348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 207 - 289
Target Start/End: Original strand, 3665324 - 3665406
Alignment:
Q  207 ttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacattaccataattatataatttaatttttt 289  Q
    ||||||||||||||| ||||||| |||||||  |||  ||||| ||||||||||||||| ||| | |||||||||| ||||||    
T  3665324 ttgcattatcaaattcaattttgcaatcctttcaatcaattcaagaaagttgacattactatattgatataatttattttttt 3665406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 159 - 237
Target Start/End: Original strand, 9896383 - 9896460
Alignment:
Q  159 aatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatcctt 237  Q
    ||||||||||| || |||||||||| |||||||||||||| ||| || ||||| ||||||||| ||||||| |||||||    
T  9896383 aatgcgtctcacatcggtttcatgaacatgaatgcgtctcgcat-atcttgcaatatcaaattcaattttgcaatcctt 9896460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 300 - 416
Target Start/End: Original strand, 14192302 - 14192420
Alignment:
Q  300 aaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttataaa-attatcccaatttcttggataataaata 397  Q
    |||| ||||||||| |||||||| ||||  |||||||||||| | |||||||| ||| |||| ||||| || ||| |||||||||  |||||||||||||    
T  14192302 aaaggcaagattaagattaatttttctagtaggcccattttctactaaaatattatttgttttgttatgaagattctcccaattttctggataataaata 14192401  T
Q  398 tcagcaatatttttaatat 416  Q
    |||   |||||||||||||    
T  14192402 tcacatatatttttaatat 14192420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 416
Target Start/End: Original strand, 6261593 - 6261678
Alignment:
Q  332 cccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||| || ||||||| |||| | || ||||| |||||||||||||||| ||| |||| |||||||| |||||||||||||||    
T  6261593 cccatttttaactaaaatagaatttgctttgttatgaaaattatcccaatttattgaataaaaaatatcatcaatatttttaatat 6261678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 416
Target Start/End: Original strand, 7413791 - 7413840
Alignment:
Q  367 aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||    
T  7413791 aaaattatcccaatttcttggataataaatatcgtcgatatttttaatat 7413840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 416
Target Start/End: Original strand, 7459872 - 7459921
Alignment:
Q  367 aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||    
T  7459872 aaaattatcccaatttcttggataataaatatcgtcgatatttttaatat 7459921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 391
Target Start/End: Complemental strand, 36213824 - 36213765
Alignment:
Q  332 cccattttcaagtaaaatataattagtttggttataaaattatcccaatttcttggataa 391  Q
    ||||||||||| ||||||| |||| |||| ||||| |||||||||||||||||| |||||    
T  36213824 cccattttcaactaaaatagaatttgttttgttattaaattatcccaatttcttagataa 36213765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 416
Target Start/End: Original strand, 23935828 - 23935874
Alignment:
Q  370 attatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||| ||||||||||||||||||||||||| ||||||| |||||||    
T  23935828 attattccaatttcttggataataaatatcaccaatattattaatat 23935874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 175 - 228
Target Start/End: Original strand, 6830670 - 6830723
Alignment:
Q  175 gtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaatttt 228  Q
    ||||||||||| | |||||||||||||| || ||||||||||||||| ||||||    
T  6830670 gtttcatgatcctaaatgcgtctcacatgatcttgcattatcaaattcaatttt 6830723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 395
Target Start/End: Original strand, 51890406 - 51890508
Alignment:
Q  295 ctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataat 392  Q
    |||| |||||||||| ||| |||||||||| ||  ||| | |||||||| ||||||||||||  ||| ||||| ||||| || ||||||| |||||||||    
T  51890406 ctttgaaagacaagaataagattaatttctatagtaggtctattttcaactaaaatataatttattttgttatgaaaatgattccaatttattggataat 51890505  T
Q  393 aaa 395  Q
    |||    
T  51890506 aaa 51890508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 395
Target Start/End: Original strand, 51890680 - 51890782
Alignment:
Q  295 ctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataat 392  Q
    |||| |||||||||| ||| |||||||||| ||  ||| | |||||||| ||||||||||||  ||| ||||| ||||| || ||||||| |||||||||    
T  51890680 ctttgaaagacaagaataagattaatttctatagtaggtctattttcaactaaaatataatttattttgttatgaaaatgattccaatttattggataat 51890779  T
Q  393 aaa 395  Q
    |||    
T  51890780 aaa 51890782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 114; Significance: 1e-57; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 175 - 415
Target Start/End: Original strand, 24185519 - 24185760
Alignment:
Q  175 gtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacattaccataattat 274  Q
    ||||||||||||||||||||| | |||| |||||| ||||||||||| ||||||  ||||||| ||| | ||||| | ||||| ||||||| ||| | ||    
T  24185519 gtttcatgatcatgaatgcgttttacatgattttgtattatcaaattcaattttacaatccttttaactaattcaagcaagtttacattactatattgat 24185618  T
Q  275 ataatttaattttttgaaacctttaaaagacaagattaaaattaatttctcta-aaggcccattttcaagtaaaatataattagtttggttataaaatta 373  Q
    |||||||||||||||| ||| | | |||||||||||||| ||||||||  |||  || ||||||||||| |||||||||||| |||| ||||||||||||    
T  24185619 ataatttaattttttggaacttctgaaagacaagattaagattaattttgctagtagacccattttcaactaaaatataatttgttttgttataaaatta 24185718  T
Q  374 tcccaatttcttggataataaatatcagcaatatttttaata 415  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
T  24185719 tcccaatttcttggacaataaatatcaccaatatttttaata 24185760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 146 - 416
Target Start/End: Original strand, 5509680 - 5509952
Alignment:
Q  146 ccacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataattta 245  Q
    ||||||||||  |||| ||||||| ||  |||||||||| ||||||||||||||||| || ||||||||||||||| |||| || |||| || ||||  |    
T  5509680 ccacatgatctcaaatacgtctcacatcagtttcatgattatgaatgcgtctcacatgatcttgcattatcaaattcaattctgcaatctttttaatcaa 5509779  T
Q  246 ttcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctcta-aaggcccattttcaagt 344  Q
    |||| ||||||||||||||| ||| | ||||||||||| |||||| || |||| |||||||||||||| |||||||| ||||  |||| ||||||||  |    
T  5509780 ttcaagaaagttgacattactatattgatataatttaaatttttggaatctttgaaagacaagattaagattaatttatctagtaggcacattttcatct 5509879  T
Q  345 aaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||| ||||  ||| ||||| ||||||||||||||||||||||||||||||||   |||||||||||||||    
T  5509880 aaaatagaatttattttgttatgaaaattatcccaatttcttggataataaatatggccaatatttttaatat 5509952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 245 - 411
Target Start/End: Original strand, 47559476 - 47559642
Alignment:
Q  245 attcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaag 343  Q
    ||||| ||||||||||||||| ||| | |||||||||||||||||||||| ||| |||||||| ||||| |||||||||||||  | || |||||| ||     
T  47559476 attcaagaaagttgacattactatattgatataatttaattttttgaaac-tttgaaagacaatattaagattaatttctctagtaagcacatttttaac 47559574  T
Q  344 taaaatataattagtttggttataaaattatcccaatttcttggataataaatatcagcaatattttt 411  Q
    |||||||||||| |||| ||||||||||||||||||||| || |||||||||||||| ||||| ||||    
T  47559575 taaaatataatttgttttgttataaaattatcccaatttttttgataataaatatcaccaatactttt 47559642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 186 - 415
Target Start/End: Original strand, 5209545 - 5209776
Alignment:
Q  186 atgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacattaccataattatataatttaatt 285  Q
    ||||||| ||||| ||| || |||||||||||||||  |   || |||||||  |||  ||||| ||||||||||||||| ||| | || |||| || ||    
T  5209545 atgaatgtgtctcgcatgatcttgcattatcaaattcgaccatgcaatcctttcaatcaattcaagaaagttgacattactatattgatgtaatatattt 5209644  T
Q  286 ttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttc 383  Q
    ||||||||||||| ||| |||||||||| |||||||||| ||  |||   |||||||| |||||||||||| |||| ||||| ||||||||||||||||     
T  5209645 ttttgaaacctttgaaaaacaagattaagattaatttctttagtaggtatattttcaactaaaatataatttgttttgttatgaaaattatcccaattta 5209744  T
Q  384 ttggataataaatatcagcaatatttttaata 415  Q
    ||||||||||||||||| |||||| |||||||    
T  5209745 ttggataataaatatcaccaatatgtttaata 5209776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 245 - 416
Target Start/End: Original strand, 47397450 - 47397624
Alignment:
Q  245 attcacgaaagttgacattaccataattatataatttaatttttt-gaaacctttaaaagacaagattaaaattaa-tttctct-aaaggcccattttca 341  Q
    ||||| ||||||||||||||| ||| | |||||||||| |||||| | ||||||| |||||||||||||| ||||| ||| ||| | ||| |||||||||    
T  47397450 attcaagaaagttgacattactatattgatataatttattttttttggaacctttgaaagacaagattaagattaattttatctcataggtccattttca 47397549  T
Q  342 agtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    | ||| |||||||| |||   |||| |||||||||| ||||||||||||||||||||||| | |||||||||||||    
T  47397550 actaagatataatt-gttccattatgaaaattatccgaatttcttggataataaatatcatcgatatttttaatat 47397624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 185 - 416
Target Start/End: Complemental strand, 12028027 - 12027794
Alignment:
Q  185 catgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttat-aatttattcacgaaagttgacattaccataattatataatttaa 283  Q
    |||||||| ||||| |||||| |||||||||||||||||| | || ||| ||| | |||  ||| | ||||| || |||||| |||   ||  ||||||     
T  12028027 catgaatgtgtctcgcataatcttgcattatcaaatttaactatgcaattcttttcaatcaattgaagaaagctggcattacaatatcgatgcaatttat 12027928  T
Q  284 ttttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatt 381  Q
    ||||||||| ||||| |||||||| ||||| |||||||||||||| ||| |||||||||| |||||| ||||| |||| ||||| ||||| |||  ||||    
T  12027927 ttttttgaa-cctttgaaagacaatattaagattaatttctctaataggtccattttcaactaaaatctaatttgttttgttatgaaaatcatcaaaatt 12027829  T
Q  382 tcttggataataaatatcagcaatatttttaatat 416  Q
    | || || ||||||||||| |||||||||||||||    
T  12027828 tattcgaaaataaatatcaccaatatttttaatat 12027794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 334 - 416
Target Start/End: Original strand, 49229351 - 49229434
Alignment:
Q  334 cattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||||| ||||||||||||  ||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  49229351 cattttcaactaaaatataatttattttgttatgaaaattatcccaatttcttggataataaatatcatcaatatttttaatat 49229434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 273 - 416
Target Start/End: Complemental strand, 9023365 - 9023220
Alignment:
Q  273 atataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaa 370  Q
    |||||||||| ||||||| || |||||||||||||||||    ||||||||||||  || | ||||||||| ||||||| |||| |||| ||||| ||||    
T  9023365 atataatttatttttttggaatctttaaaagacaagattttggttaatttctctagtagactcattttcaactaaaatagaatttgttttgttattaaaa 9023266  T
Q  371 ttatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
     ||||||||||  ||||||||||||||||| | |||||||||||||    
T  9023265 ctatcccaattatttggataataaatatcatcgatatttttaatat 9023220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 329 - 416
Target Start/End: Complemental strand, 36296788 - 36296700
Alignment:
Q  329 aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||||||||| |||||||||||| |||||||||| |||||| ||||||||| |||||||||||||||||   |||||||||||||    
T  36296788 aggcccattttcaactaaaatataatttgtttggttatgaaaattctcccaattttttggataataaatatcacatatatttttaatat 36296700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 329 - 400
Target Start/End: Complemental strand, 42722323 - 42722251
Alignment:
Q  329 aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatca 400  Q
    |||||||||||||| |||||||||||| |||||||||| |||||| ||||||||| |||||||||||||||||    
T  42722323 aggcccattttcaactaaaatataatttgtttggttatgaaaattctcccaattttttggataataaatatca 42722251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 334 - 416
Target Start/End: Complemental strand, 25095255 - 25095172
Alignment:
Q  334 cattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||||| ||||||| |||| | || ||||| ||||||||||||||||||||||||||||||| |  |||||||||||||||    
T  25095255 cattttcaactaaaatagaatttgctttgttatgaaaattatcccaatttcttggataataaataccgtcaatatttttaatat 25095172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 346 - 416
Target Start/End: Complemental strand, 48646232 - 48646161
Alignment:
Q  346 aaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||||| |||| ||| | |||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  48646232 aaatataatttgttttgttttgaaaattatcccaatttattggataataaatatcaccaatatttttaatat 48646161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 416
Target Start/End: Original strand, 23664120 - 23664205
Alignment:
Q  332 cccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||||||| ||||||| |||| | || ||||| ||||||||||||||||||||||||||||||||   ||| |||||||||||    
T  23664120 cccattttcaactaaaatagaatttgctttgttatgaaaattatcccaatttcttggataataaatatggtcaacatttttaatat 23664205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 416
Target Start/End: Original strand, 28945803 - 28945916
Alignment:
Q  305 caagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttataa-aattatcccaatttcttggataataaatatcagc 402  Q
    ||||||||| |||||||||||||  ||  |||||||||| |||||||||||| |||| ||||| | |||| |||||||||  ||||||||||||||||      
T  28945803 caagattaagattaatttctctagtagatccattttcaactaaaatataatttgttttgttatgagaattctcccaattttctggataataaatatcaca 28945902  T
Q  403 aatatttttaatat 416  Q
     |||||||||||||    
T  28945903 tatatttttaatat 28945916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 335 - 416
Target Start/End: Complemental strand, 5049544 - 5049462
Alignment:
Q  335 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||| ||||||| |||| | || ||||  |||||||||||||||||||||||||||||||||  | |||||||||||||    
T  5049544 attttcaactaaaatagaatttgctttgttacgaaaattatcccaatttcttggataataaatatcgtcgatatttttaatat 5049462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 346 - 416
Target Start/End: Original strand, 12783996 - 12784066
Alignment:
Q  346 aaatataattagtttggttataaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||||| |||| | |||||||||||| |||||| ||||||||||||||  | |||||||||||||||    
T  12783996 aaatataatttgttttgctataaaattatcgcaattttttggataataaatactaccaatatttttaatat 12784066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 335 - 416
Target Start/End: Original strand, 17967339 - 17967421
Alignment:
Q  335 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||| ||||||| |||| | || ||||  |||||||||||||||||||||||||||||||||  | |||||||||||||    
T  17967339 attttcaactaaaatagaatttgctttgttacgaaaattatcccaatttcttggataataaatatcgtcgatatttttaatat 17967421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 335 - 416
Target Start/End: Original strand, 48596367 - 48596449
Alignment:
Q  335 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||| ||||||| |||| | || ||||| |||||||||| ||||||||||||||||||||||  | |||||||||||||    
T  48596367 attttcaactaaaatagaatttgctttgttatgaaaattatcctaatttcttggataataaatatcgtcgatatttttaatat 48596449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 416
Target Start/End: Complemental strand, 21906468 - 21906386
Alignment:
Q  335 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||| ||||||| |||| | || ||||  ||||||||||||||||||||||||||||||||   | |||||||||||||    
T  21906468 attttcaactaaaatagaatttgctttgttacgaaaattatcccaatttcttggataataaatattgtcgatatttttaatat 21906386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 412
Target Start/End: Original strand, 27430805 - 27430883
Alignment:
Q  335 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatattttta 412  Q
    |||||||| ||||||| |||| | || ||||  |||||||||||||||||||||||||||||||||  | |||||||||    
T  27430805 attttcaactaaaatagaatttgctttgttacgaaaattatcccaatttcttggataataaatatcgtcgatattttta 27430883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 416
Target Start/End: Original strand, 34307461 - 34307543
Alignment:
Q  335 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||| ||||||| |||| | || ||||  |||||||||||||||||||| ||||||||||||  | |||||||||||||    
T  34307461 attttcaactaaaatagaatttgctttgttacgaaaattatcccaatttcttgaataataaatatcgtcgatatttttaatat 34307543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 367 - 416
Target Start/End: Complemental strand, 48999459 - 48999410
Alignment:
Q  367 aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||||||||||||||||||||||||||||  | |||| ||||||||    
T  48999459 aaaattatcccaatttcttggataataaatatcgtcgatatgtttaatat 48999410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 333 - 416
Target Start/End: Complemental strand, 26221766 - 26221682
Alignment:
Q  333 ccattttcaagtaaaatataattagtttggttataaa-attatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||| | |||||||| ||| |||| ||||| || ||| ||||||||| |||||||||||||||||   |||||||||||||    
T  26221766 ccattttctactaaaatattatttgttttgttatgaagattctcccaattttttggataataaatatcacatatatttttaatat 26221682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 416
Target Start/End: Complemental strand, 22070592 - 22070510
Alignment:
Q  335 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||| ||||||| |||| | |  ||||| ||||||||| |||||| ||||||||||||||||  | |||||||||||||    
T  22070592 attttcaactaaaatagaatttgctctgttatgaaaattatctcaattttttggataataaatatcgtcgatatttttaatat 22070510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 265
Target Start/End: Complemental strand, 44310647 - 44310547
Alignment:
Q  165 tctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacatta 264  Q
    ||||| || ||||| || || ||||||| || |||||| || ||||||||||||||| |||| || ||| |||  |||  ||||| ||||||||||||||    
T  44310647 tctcacatcggttttataatgatgaatgtgtttcacatgatcttgcattatcaaattcaattatgcaattctttcaatcaattcaagaaagttgacatta 44310548  T
Q  265 c 265  Q
    |    
T  44310547 c 44310547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 110; Significance: 3e-55; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 176 - 416
Target Start/End: Complemental strand, 40934297 - 40934056
Alignment:
Q  176 tttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacattaccataattata 275  Q
    |||||||||||| ||||| |||| |||||||||||||||||||||  ||||||| |||  || ||||  ||| | ||||||||||||||| ||||| |||    
T  40934297 tttcatgatcataaatgcatctcgcataattttgcattatcaaatccaattttgaaatttttttaatcaattgaagaaagttgacattactataatgata 40934198  T
Q  276 taatttaattttttgaaacctttaaaagacaagattaaaattaatttctcta-aaggcccattttcaagtaaaatataattagtttggttataaaattat 374  Q
    |||||| |||||||| ||||||| |||||||||||||| ||||||||||| |  |  |||| |||||| ||||| |||||| |||| |||||||||||||    
T  40934197 taatttcattttttgtaacctttgaaagacaagattaagattaatttctccagtatacccaatttcaactaaaacataatttgttttgttataaaattat 40934098  T
Q  375 cccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    || ||||||||||||||||||||| | |||||||||||||||    
T  40934097 ccaaatttcttggataataaatatgatcaatatttttaatat 40934056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 153 - 416
Target Start/End: Complemental strand, 9420727 - 9420462
Alignment:
Q  153 atcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacga 252  Q
    |||| ||||||  |||| || |||||||||||||||||||| |||| ||| || ||||||||| ||||| |||| || |||| || ||||  ||||| ||    
T  9420727 atcccaaatgcacctcatatcggtttcatgatcatgaatgcctctcgcatgatcttgcattattaaattcaattctgcaatctttttaatcaattcaaga 9420628  T
Q  253 aagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctcta-aaggcccattttcaagtaaaatat 351  Q
    ||||||||||||| | | | |||||||||| ||||||| || ||||||||||||||||||| |||| ||||||||  |  | ||||||||| |||||||     
T  9420627 aagttgacattactacattgatataatttatttttttggaatctttaaaagacaagattaagattattttctctaggaaactcattttcaactaaaataa 9420528  T
Q  352 aattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||  ||| ||||| ||||| |||| ||||||||||||||||||| ||| ||||||||| |||||    
T  9420527 aatttattttgttatgaaaataatcctaatttcttggataataaatttcaacaatattttaaatat 9420462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 146 - 416
Target Start/End: Complemental strand, 21863877 - 21863606
Alignment:
Q  146 ccacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataattta 245  Q
    ||||||||| | |||||||||||| || | ||||||| ||| ||||| ||||| ||| || ||| ||||||||||| ||||||| |||| ||  |||  |    
T  21863877 ccacatgataccaaatgcgtctcacatcgatttcatggtcaagaatgtgtctcgcatgatcttggattatcaaattcaattttgcaatcatttcaatcaa 21863778  T
Q  246 ttcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctcta-aaggcccattttcaagt 344  Q
    ||||  ||||||||||||||  || | ||||||||| |||||||| || |||| || |||| |||||| |||||||||||||   || |||||||||| |    
T  21863777 ttcaaaaaagttgacattactttattaatataattt-attttttggaatctttgaaggacatgattaagattaatttctctacttggtccattttcaact 21863679  T
Q  345 aaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||||||| | || ||||| ||||||||| |||||||||| ||||||||||||| |||||||||||||||    
T  21863678 aaaatataatttgctttgttatgaaaattatctcaatttcttgaataataaatatcaccaatatttttaatat 21863606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 245 - 415
Target Start/End: Original strand, 28460165 - 28460338
Alignment:
Q  245 attcacgaaagttgacattaccataattatataatttaatttttt--gaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttca 341  Q
    ||||| ||||||||||||| | ||| | |||||||||||||||||  | |||||||||||||||| |||||||||||||| ||||  | |||||||||||    
T  28460165 attcaagaaagttgacattgctatattgatataatttaattttttttggaacctttaaaagacaatattaaaattaatttttctagtaagcccattttca 28460264  T
Q  342 agtaaaatataattagtttggttataaaattatcccaatttcttggataataaatatcagcaatatttttaata 415  Q
    | |||||||| ||| |||| |||| |||||||||| || |||||||||||||||||||| ||||||||||||||    
T  28460265 actaaaatatcatttgttttgttaaaaaattatccaaacttcttggataataaatatcaccaatatttttaata 28460338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 277 - 416
Target Start/End: Original strand, 39038847 - 39038988
Alignment:
Q  277 aatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattat 374  Q
    |||||||||||||||||||||||| |||||||||||| |||||||| ||||  ||||||||||| || |||||||||||| |||| ||||  ||||||||    
T  39038847 aatttaattttttgaaacctttaacagacaagattaagattaatttatctagtaggcccatttttaactaaaatataatttgttttgttacgaaaattat 39038946  T
Q  375 cccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||||||||| ||||||||||| |||||||||||||||    
T  39038947 cccaatttcttggacaataaatatcaccaatatttttaatat 39038988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 146 - 416
Target Start/End: Original strand, 45445899 - 45446164
Alignment:
Q  146 ccacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataattta 245  Q
    ||||||||||  |||| ||||||| || |||||||||||||      |||||| ||| || ||||||||||||||| |||| |  |||| || ||||| |    
T  45445899 ccacatgatctcaaatacgtctcacatcggtttcatgatcac-----cgtctcgcatgatcttgcattatcaaattcaattctacaatctttttaattaa 45445993  T
Q  246 ttcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctcta-aaggcccattttcaagt 344  Q
    |||  ||||| | ||||||| ||| | |||||||||  ||||||| ||||||| ||||| ||||||||||||||||||||||  ||||| |||||||| |    
T  45445994 ttcgagaaagctaacattactatattgatataatttt-ttttttggaacctttgaaagaaaagattaaaattaatttctctagtaggccaattttcaact 45446092  T
Q  345 aaaatataattagtttggttataaa-attatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||||||| ||||  ||||||| |||||  ||||||||||||| || ||||| | |||||||||||||||    
T  45446093 aaaatataatttgttttcttataaatattatttcaatttcttggatgat-aatatgatcaatatttttaatat 45446164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 274 - 416
Target Start/End: Original strand, 43179378 - 43179521
Alignment:
Q  274 tataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttataaaatt 372  Q
    |||||||||||||||   ||||||| ||||| |||||||| |||||||| | ||| || | |||||| || |||||||||||| |||| |||||||||||    
T  43179378 tataatttaatttttgagaacctttgaaagataagattaagattaatttttttaatagactcatttttaactaaaatataatttgttttgttataaaatt 43179477  T
Q  373 atcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||||||||||||||||||||||| || |||||| |||||    
T  43179478 atcccaatttcttggataataaatatcaccagtattttcaatat 43179521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 150 - 416
Target Start/End: Complemental strand, 5771141 - 5770884
Alignment:
Q  150 atgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattca 249  Q
    |||||| | ||||| ||||| ||  ||||||||||||||||||| | || ||| || ||||| ||  ||||| | ||||| |||||||  |||  |||||    
T  5771141 atgatcatgaatgcatctcacatcagtttcatgatcatgaatgcatgtcgcatgatcttgcaatactaaattcatttttgcaatcctttcaatcaattca 5771042  T
Q  250 cgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaaaggcccattttcaagtaaaat 349  Q
     |||| |||||||||| ||| | |||||||||| | ||||| || |||  |||||||||||||| |||||||||     |||| ||||||||| ||||||    
T  5771041 agaaatttgacattacaatattgatataatttactcttttggaaacttagaaagacaagattaatattaatttc---gtaggctcattttcaactaaaat 5770945  T
Q  350 ataattagtttggttataaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||  |||  |||||    ||||||||||||||||||||||||||||| |||||||||||||||    
T  5770944 ataatttattt--ttata----tatcccaatttcttggataataaatatcaccaatatttttaatat 5770884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 333 - 416
Target Start/End: Original strand, 29636904 - 29636988
Alignment:
Q  333 ccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||||| |||||||||||| |||| ||| | |||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  29636904 ccattttcaactaaaatataatttgttttgttttgaaaattatcccaatttattggataataaatatcatcaatatttttaatat 29636988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 266 - 416
Target Start/End: Original strand, 35118193 - 35118342
Alignment:
Q  266 cataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctcta-aaggcccattttcaagtaaaatataattagtttggtt 364  Q
    |||||| ||||| |||||||||||| ||||||| |||||||| ||| | |||||||| | ||  ||||  |||||||| |||||||||||| |||| |||    
T  35118193 cataatgatatagtttaattttttggaacctttgaaagacaacattcagattaatttttttagtaggcttattttcaactaaaatataatttgttttgtt 35118292  T
Q  365 ataaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||  || |||||| ||||||||||||||| | |||||| ||||||||    
T  35118293 ataaaat--tctcaatttattggataataaatatgaccaatatatttaatat 35118342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 334 - 416
Target Start/End: Original strand, 24441941 - 24442024
Alignment:
Q  334 cattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||||  ||||||||||| |||| ||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  24441941 cattttcaacaaaaatataatttgttttgttattaaaattatcccaatttattggataataaatatcaccaatatttttaatat 24442024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 185 - 416
Target Start/End: Original strand, 8113779 - 8114010
Alignment:
Q  185 catgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacattaccataattatataatttaat 284  Q
    |||||||| ||||| ||| || || |||||||||||| || | || |||||||  |||  ||||  |||| |||||||||| ||| | || ||||||| |    
T  8113779 catgaatgtgtctcgcatgatcttccattatcaaattcaactatgcaatcctttcaatcaattcgagaaaattgacattactatattaatgtaatttatt 8113878  T
Q  285 tttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaattt 382  Q
    |||||  ||||||| ||||| || ||||| |||||| ||| ||  |||   |||||||| |||||||||||| |||  ||||| ||||||| ||||| ||    
T  8113879 tttttagaacctttgaaagaaaatattaagattaatatctgtagtaggtttattttcaactaaaatataatttgtt--gttatgaaaattaccccaactt 8113976  T
Q  383 cttggataataaatatcagcaatatttttaatat 416  Q
     ||||||||||||||||| |||||||||||||||    
T  8113977 attggataataaatatcaccaatatttttaatat 8114010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 329 - 400
Target Start/End: Complemental strand, 48636788 - 48636716
Alignment:
Q  329 aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatca 400  Q
    |||||||||||||| |||||||||||| |||||||||| |||||| ||||||||| |||||||||||||||||    
T  48636788 aggcccattttcaactaaaatataatttgtttggttatgaaaattctcccaattttttggataataaatatca 48636716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 305 - 414
Target Start/End: Complemental strand, 8069691 - 8069580
Alignment:
Q  305 caagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagc 402  Q
    ||||||||| |||||||||||||  |||||||||||||| |||||||||||| |||| ||||| | |||| |||||||||  ||||||||||||||||      
T  8069691 caagattaagattaatttctctagtaggcccattttcaactaaaatataatttgttttgttatgagaattctcccaattttctggataataaatatcaca 8069592  T
Q  403 aatatttttaat 414  Q
     |||||||||||    
T  8069591 tatatttttaat 8069580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 276 - 416
Target Start/End: Original strand, 8604552 - 8604694
Alignment:
Q  276 taatttaattttttgaaacctttaaaagacaagattaaaattaatttctcta-aaggcccattttcaagtaaaatataattagtttggttat-aaaatta 373  Q
    ||||||||||||||| ||||||| |||||||||||||| ||||| || ||||  ||| | |||||||| ||||||||||||  ||| ||||| |||| |     
T  8604552 taatttaattttttggaacctttgaaagacaagattaagattaacttatctagtaggtcaattttcaaataaaatataatttatttagttataaaaaatt 8604651  T
Q  374 tcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||| ||| ||||||||||| ||| | ||||||| |||||||    
T  8604652 tcccagtttattggataataattatgaccaatattattaatat 8604694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 333 - 416
Target Start/End: Original strand, 41822148 - 41822232
Alignment:
Q  333 ccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||| || || |||||||||  ||| ||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  41822148 ccatttttaactataatataatttattttgttatgaaaattatccaaatttcttggataataaatatcatcaatatttttaatat 41822232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 305 - 414
Target Start/End: Complemental strand, 48238570 - 48238459
Alignment:
Q  305 caagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagc 402  Q
    ||||||||| ||| |||||||||  |||||||||||||| |||||||||||| |||| ||||| |||||| | |||||||  ||||||||||||||||      
T  48238570 caagattaagatttatttctctagtaggcccattttcaactaaaatataatttgttttgttatgaaaattcttccaattttctggataataaatatcaca 48238471  T
Q  403 aatatttttaat 414  Q
     |||||||||||    
T  48238470 tatatttttaat 48238459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 416
Target Start/End: Original strand, 6189387 - 6189500
Alignment:
Q  305 caagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttataa-aattatcccaatttcttggataataaatatcagc 402  Q
    ||||||||| |||||||||||||  | |||||||||||| |||||||||||| |||| ||||  | |||| |||||||||  ||||||||||||||||      
T  6189387 caagattaagattaatttctctagtatgcccattttcaactaaaatataatttgttttgttaagagaattctcccaattttctggataataaatatcaca 6189486  T
Q  403 aatatttttaatat 416  Q
     |||||||||||||    
T  6189487 tatatttttaatat 6189500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 331 - 416
Target Start/End: Original strand, 20394796 - 20394882
Alignment:
Q  331 gcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||||| || ||||||| |||| | || ||||| |||||||||||||||||||| ||||||||||||  | |||||||||||||    
T  20394796 gcccattttgaactaaaatagaatttgctttgttatgaaaattatcccaatttcttgaataataaatatcgtcgatatttttaatat 20394882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 335 - 416
Target Start/End: Original strand, 31072539 - 31072621
Alignment:
Q  335 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||| ||||||| |||| | || ||||  |||||||||||||||||||||||||||||||||  | |||||||||||||    
T  31072539 attttcaactaaaatagaatttgctttgttacgaaaattatcccaatttcttggataataaatatcgtcgatatttttaatat 31072621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 295 - 416
Target Start/End: Complemental strand, 44733764 - 44733643
Alignment:
Q  295 ctttaaaagacaagattaaaattaatttctctaaaggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataata 393  Q
    |||| ||||||||||||||| |||||||||    |||| ||||||||| |||| || ||||  ||| ||||| ||||||||| || ||||||||||||||    
T  44733764 ctttgaaagacaagattaaagttaatttcttagtaggctcattttcaactaaattagaatttattttgttatgaaaattatctca-tttcttggataata 44733666  T
Q  394 aatatcagcaatatttttaatat 416  Q
    ||||||| | ||||||| |||||    
T  44733665 aatatcatcgatattttcaatat 44733643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 276 - 416
Target Start/End: Original strand, 3124209 - 3124354
Alignment:
Q  276 taatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaa---aatataattagtttggttat-aaaa 370  Q
    ||||||| ||||||| || |||| ||| |||||||||| |||||||| ||||  | || ||||||| | |||   |||| |||| |||| ||||| ||||    
T  3124209 taatttatttttttggaatctttgaaaaacaagattaatattaatttatctagtatgctcattttccaataataaaataaaatttgttttgttatgaaaa 3124308  T
Q  371 ttatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
     |||| ||||||| |||||||||||||||| | |||||||||||||    
T  3124309 atatctcaatttcctggataataaatatcatcgatatttttaatat 3124354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 147 - 226
Target Start/End: Original strand, 39038750 - 39038829
Alignment:
Q  147 cacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaatt 226  Q
    |||||||||||||||| |||||| ||  |||||||||||| ||||  ||||| ||| || ||||||||||||||| ||||    
T  39038750 cacatgatcctaaatgtgtctcacatcagtttcatgatcaagaatatgtctcgcatgatcttgcattatcaaattcaatt 39038829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 416
Target Start/End: Original strand, 8389314 - 8389396
Alignment:
Q  335 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||| ||||||| |||| | || ||||| ||||||||||  |||||||||||||||||||||  | |||||||||||||    
T  8389314 attttcaactaaaatagaatttgctttgttatgaaaattatcctcatttcttggataataaatatcgtcgatatttttaatat 8389396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 332 - 416
Target Start/End: Complemental strand, 135746 - 135661
Alignment:
Q  332 cccattttcaagtaaaatataattagtttggttataaa-attatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||||||| |||||||||||| |||| ||| | || ||| |||||||||  |||||||||||||| |  ||||||||||||||    
T  135746 cccattttcaattaaaatataatttgtttagttgtgaagattctcccaattttctggataataaatattacaaatatttttaatat 135661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 367 - 416
Target Start/End: Complemental strand, 1623621 - 1623572
Alignment:
Q  367 aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||||||||||||||||||||||||||||   | |||||||||||||    
T  1623621 aaaattatcccaatttcttggataataaatattgtcgatatttttaatat 1623572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 367 - 416
Target Start/End: Complemental strand, 4539922 - 4539873
Alignment:
Q  367 aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||||| |||||||||||||||||||||||  | |||||||||||||    
T  4539922 aaaattatctcaatttcttggataataaatatcgtcgatatttttaatat 4539873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 367 - 416
Target Start/End: Complemental strand, 23381160 - 23381111
Alignment:
Q  367 aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||||||||||| |||||| |||||||||| | |||||||||||||    
T  23381160 aaaattatcccaattttttggatgataaatatcaccgatatttttaatat 23381111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 367 - 416
Target Start/End: Original strand, 35478025 - 35478074
Alignment:
Q  367 aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||||| |||||||||||||||||||||||  | |||||||||||||    
T  35478025 aaaattatctcaatttcttggataataaatatcgtcgatatttttaatat 35478074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 400
Target Start/End: Original strand, 19311919 - 19312021
Alignment:
Q  300 aaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaata 397  Q
    |||| ||| ||||| |||||||| ||||| |||||||||||||| |||||||| ||| |||| ||||| || ||| | |||||||  ||||||| |||||    
T  19311919 aaaggcaatattaagattaatttttctaataggcccattttcaactaaaatattattcgttttgttatgaagattcttccaattttctggataacaaata 19312018  T
Q  398 tca 400  Q
    |||    
T  19312019 tca 19312021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 416
Target Start/End: Complemental strand, 13754171 - 13754122
Alignment:
Q  367 aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||||| |||||||||||||||||||||||    |||||||||||||    
T  13754171 aaaattatctcaatttcttggataataaatatcgttgatatttttaatat 13754122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 416
Target Start/End: Complemental strand, 18667424 - 18667375
Alignment:
Q  367 aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||||| ||||||||||||||||||||||   | |||||||||||||    
T  18667424 aaaattatctcaatttcttggataataaatattgtcgatatttttaatat 18667375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 376 - 412
Target Start/End: Complemental strand, 15991966 - 15991930
Alignment:
Q  376 ccaatttcttggataataaatatcagcaatattttta 412  Q
    |||||||||||||||||||||||||  ||||||||||    
T  15991966 ccaatttcttggataataaatatcataaatattttta 15991930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 81; Significance: 6e-38; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 146 - 416
Target Start/End: Original strand, 18424 - 18696
Alignment:
Q  146 ccacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataattta 245  Q
    ||||||||||| |||||||||||| || | |||||| || ||||||  ||||| ||| || || |||||||||||| || | || ||||| |  |||  |    
T  18424 ccacatgatcccaaatgcgtctcacatcgatttcataattatgaatatgtctcgcatgatctttcattatcaaattcaaatatgcaatccattgaatcaa 18523  T
Q  246 ttcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagt 344  Q
    |||| |||| |||||||||| ||| | |||||||||| ||||||| || |||| |||||| ||||||| ||||| || ||||  |||| ||||||||| |    
T  18524 ttcaagaaatttgacattacaatattgatataatttatttttttggaatctttgaaagactagattaagattaagttttctagtaggctcattttcaact 18623  T
Q  345 aaaatataattagtttggttataaaatta-tcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||| |||| |||| ||||||||| || || |||||| ||||||||||||||||| |||||||||||||||    
T  18624 aaaataaaatttgttttgttataaaaataatctcaatttattggataataaatatcaccaatatttttaatat 18696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 3e-36; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 185 - 416
Target Start/End: Original strand, 11680721 - 11680954
Alignment:
Q  185 catgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacattaccataattatataatttaat 284  Q
    |||||||| ||||  ||| || ||||||||||||||| || | || |||||||  |||  ||||| ||||||||||||||  ||| | || | ||||| |    
T  11680721 catgaatgtgtctagcatgatcttgcattatcaaattcaactatgcaatcctttcaatcaattcaagaaagttgacattattatattgatgtgatttatt 11680820  T
Q  285 tttttgaaacctttaaaagacaagattaaaattaatttctcta-aaggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaattt 382  Q
    | |||||||||||| ||||| |||||||| |||||||| ||||  |||  ||||||||| |||||||||||| |||| ||||| |||||||| |||||||    
T  11680821 tgtttgaaacctttgaaagataagattaagattaatttttctagtaggttcattttcaactaaaatataatttgttttgttatgaaaattattccaattt 11680920  T
Q  383 cttggataataaatatcagcaatatttttaatat 416  Q
     ||||||||||||||||| |||||||||||||||    
T  11680921 attggataataaatatcaccaatatttttaatat 11680954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 207 - 414
Target Start/End: Original strand, 3229087 - 3229292
Alignment:
Q  207 ttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagaca 306  Q
    ||||| ||||||||| ||||||| |||||||  |||| ||||| |||| |||||||||| ||| | |||||||||| ||||||| ||||||  |||||||    
T  3229087 ttgcaatatcaaattcaattttgcaatcctttcaattaattcaagaaatttgacattacaatattgatataatttatttttttggaaccttagaaagaca 3229186  T
Q  307 agattaaaattaatttctctaaaggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaat 405  Q
     |||||| |||||||||     ||||  |||||||| ||  | |||||| |||| ||||| ||||||||||  |||||||||||||||||||||| ||||    
T  3229187 cgattaagattaatttcgt---aggctaattttcaactaggaaataatttgttttgttatgaaaattatccacatttcttggataataaatatcaccaat 3229283  T
Q  406 atttttaat 414  Q
    |||||||||    
T  3229284 atttttaat 3229292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 245 - 416
Target Start/End: Complemental strand, 19108112 - 19107943
Alignment:
Q  245 attcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaaaggcccattttcaagt 344  Q
    ||||| ||||||||||||||| ||| | | |||||||| ||||||||||||||  ||||| |||||||| |||||||||     | || ||||||||| |    
T  19108112 attcaagaaagttgacattacaatattgaaataatttatttttttgaaaccttacaaagagaagattaagattaatttcgg---atgctcattttcaact 19108016  T
Q  345 aaaatata-attagtttggttataaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||| |||  |||| ||  |||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  19108015 aaaatatatatttttttgttttgaaaattatcccaattttttggataataaatatcaccaatatttttaatat 19107943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 245 - 415
Target Start/End: Complemental strand, 31129920 - 31129753
Alignment:
Q  245 attcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaaaggcccattttcaagt 344  Q
    ||||| |||||||| ||| || ||| | |||||||||| |||||||||||||   ||| | |||||||| |||||||||   | || | ||||||||| |    
T  31129920 attcaagaaagttgtcatcacaatattaatataatttatttttttgaaacctgagaaatataagattaagattaatttc---atagactcattttcaact 31129824  T
Q  345 aaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaata 415  Q
    ||||| ||||| |||| ||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  31129823 aaaatgtaatt-gttttgttatgaaaattatcccaatttctttgataataaatatcatcaatatttttaata 31129753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 207 - 416
Target Start/End: Complemental strand, 26817575 - 26817365
Alignment:
Q  207 ttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacattaccataattatataat-ttaattttttgaaacctttaaaagac 305  Q
    ||||||||||||||| |||| || |||| ||  |||  ||||| ||||||| ||||||| ||| | ||| ||  ||  ||||||| || |||| ||||||    
T  26817575 ttgcattatcaaattcaattctgcaatcatttcaatcaattcaagaaagttaacattactatattgataaaaaatttgttttttggaatctttgaaagac 26817476  T
Q  306 aagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagca 403  Q
    |||||||| |||||||||||||  | ||| |||||||| ||||||| |||| |||  ||||| |||| ||||||||||||||||||||||||||||| |     
T  26817475 aagattaagattaatttctctagtatgcctattttcaactaaaatagaatttgtt--gttatgaaaaatatcccaatttcttggataataaatatcatcg 26817378  T
Q  404 atatttttaatat 416  Q
    |||||| ||||||    
T  26817377 atatttgtaatat 26817365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 306 - 416
Target Start/End: Original strand, 33516611 - 33516723
Alignment:
Q  306 aagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagca 403  Q
    |||||||| |||||||||||||  |||||||||||||| |||||||||||| |||| ||||| |||||| |||||||||  ||||||||||||||||       
T  33516611 aagattaagattaatttctctagtaggcccattttcaactaaaatataatttgttttgttatgaaaattctcccaattttctggataataaatatcacat 33516710  T
Q  404 atatttttaatat 416  Q
    |||||||||||||    
T  33516711 atatttttaatat 33516723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 335 - 416
Target Start/End: Complemental strand, 1423044 - 1422962
Alignment:
Q  335 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||| ||||||| |||| | || ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  1423044 attttcaactaaaatagaatttgctttgttatgaaaattatcccaatttcttggataataaatatcatcaatatttttaatat 1422962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 150 - 322
Target Start/End: Complemental strand, 22524988 - 22524816
Alignment:
Q  150 atgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattca 249  Q
    |||||| | |||| |||||| || ||||||||||||||||||| |||||| |||| |||||| | |  || | ||||||  |||| ||  |||  |||||    
T  22524988 atgatcatgaatgtgtctcacatcggtttcatgatcatgaatgtgtctcatataaatttgcaatgttgaagtcaattttacaatcttttcaatcaattca 22524889  T
Q  250 cgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaattt 322  Q
     |||||||| ||| || ||||| |||||||||| ||||||| |||||| ||||||||||||||| ||| ||||    
T  22524888 agaaagttgtcatcacaataatgatataatttatttttttggaaccttaaaaagacaagattaagattcattt 22524816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 330 - 416
Target Start/End: Complemental strand, 1131868 - 1131781
Alignment:
Q  330 ggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||||||||| ||||||| |||| | ||  |||| |||||||||||||||||||||||||||||||||  | |||||||||||||    
T  1131868 ggcccattttcaactaaaatagaatttgctttattatgaaaattatcccaatttcttggataataaatatcgtcgatatttttaatat 1131781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 335 - 416
Target Start/End: Complemental strand, 15060255 - 15060173
Alignment:
Q  335 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||| || ||||||| |||| |||| ||||| ||||||||| |||||||||||||||||||||||| | |||||||||||||    
T  15060255 atttttaactaaaatagaatttgttttgttatgaaaattatctcaatttcttggataataaatatcatcgatatttttaatat 15060173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 416
Target Start/End: Complemental strand, 18675445 - 18675360
Alignment:
Q  332 cccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||| || ||||||| |||| | || ||||| |||||||||| ||||||||||||||||||||||  |||||||||||||||    
T  18675445 cccatttttaactaaaatagaatttgctttgttatgaaaattatcctaatttcttggataataaatatcgacaatatttttaatat 18675360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 335 - 416
Target Start/End: Original strand, 22012131 - 22012213
Alignment:
Q  335 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||| ||||||| |||| | || ||||| ||||||||| |||||||||||||||||||||||  | |||||||||||||    
T  22012131 attttcaactaaaatagaatttgctttgttatgaaaattatctcaatttcttggataataaatatcgtcgatatttttaatat 22012213  T

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Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 335 - 416
Target Start/End: Complemental strand, 34043633 - 34043551
Alignment:
Q  335 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||| ||||||| |||| | || ||||| ||||||||||| |||||||||||||||||||||  | |||||||||||||    
T  34043633 attttcaactaaaatagaatttgctttgttatgaaaattatccccatttcttggataataaatatcgtcgatatttttaatat 34043551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 21442726 - 21442661
Alignment:
Q  335 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatc 399  Q
    |||||||| ||||||| |||| | || ||||| |||||||||||||||||||||||||||||||||    
T  21442726 attttcaactaaaatagaatttgctttgttatgaaaattatcccaatttcttggataataaatatc 21442661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 334 - 412
Target Start/End: Original strand, 4065601 - 4065680
Alignment:
Q  334 cattttcaagtaaaatataattagtttggttataaa-attatcccaatttcttggataataaatatcagcaatattttta 412  Q
    ||||||||| |||||||| ||| |||| ||||| || | | | ||||||||||||||||||||||||| |||||||||||    
T  4065601 cattttcaactaaaatatcatttgttttgttatgaagagtcttccaatttcttggataataaatatcaccaatattttta 4065680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 87
Target Start/End: Original strand, 15603786 - 15603824
Alignment:
Q  49 cacctaagaataataacaccaaaaaagtttacattacta 87  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  15603786 cacctaagaataataacaccaaaaaactttacattacta 15603824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 1831273 - 1831209
Alignment:
Q  12 agagaacaataatatctgtgaagtagactgcaattt--acacctaagaataataacaccaaaaaa 74  Q
    |||||||||||| ||||| ||||||||||| |||||   || |||||||||||||||||||||||    
T  1831273 agagaacaataacatctgcgaagtagactgaaattttagcatctaagaataataacaccaaaaaa 1831209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 367 - 416
Target Start/End: Complemental strand, 20990493 - 20990444
Alignment:
Q  367 aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||||| |||||||||||||||||||||||  | |||||||||||||    
T  20990493 aaaattatctcaatttcttggataataaatatcgtcgatatttttaatat 20990444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 367 - 416
Target Start/End: Original strand, 26212911 - 26212960
Alignment:
Q  367 aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||||||  |||||||||||||||||||||| | |||||||||||||    
T  26212911 aaaattatcctgatttcttggataataaatatcatcgatatttttaatat 26212960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 416
Target Start/End: Complemental strand, 1603426 - 1603377
Alignment:
Q  367 aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||||||  |||||||||||||||||||||  | |||||||||||||    
T  1603426 aaaattatcctcatttcttggataataaatatcgtcgatatttttaatat 1603377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 412
Target Start/End: Original strand, 4090808 - 4090885
Alignment:
Q  336 ttttcaagtaaaatataattagtttggttataaa-attatcccaatttcttggataataaatatcagcaatattttta 412  Q
    ||||||| ||||||||  || |||| ||||| || ||| || |||||||||||||||||||||| | |||||||||||    
T  4090808 ttttcaactaaaatatcgtttgttttgttatgaagattctcgcaatttcttggataataaatattatcaatattttta 4090885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 400
Target Start/End: Complemental strand, 22524782 - 22524749
Alignment:
Q  367 aaaattatcccaatttcttggataataaatatca 400  Q
    ||||| ||||||||||||||||||||||||||||    
T  22524782 aaaatcatcccaatttcttggataataaatatca 22524749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 76
Target Start/End: Original strand, 11680480 - 11680508
Alignment:
Q  48 acacctaagaataataacaccaaaaaagt 76  Q
    |||||||||||||||||||||||||||||    
T  11680480 acacctaagaataataacaccaaaaaagt 11680508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1266 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 146 - 416
Target Start/End: Complemental strand, 1592 - 1320
Alignment:
Q  146 ccacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataattta 245  Q
    ||||||||||| |||||||||||| || ||||| || || |||||| |||||| ||| || ||||||||| ||| | || | || ||||| |  |||  |    
T  1592 ccacatgatcccaaatgcgtctcacatcggttttataattatgaatacgtctcgcatgatcttgcattattaaagtcaaatatgcaatccattgaatcaa 1493  T
Q  246 ttcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagt 344  Q
    |||| |||| |||||||||| ||| | |||||||||| | ||||| || |||| |||||| ||||||| ||||| || ||||  |||| ||||||||| |    
T  1492 ttcaagaaatttgacattacaatattgatataatttattattttggaatctttgaaagactagattaagattaagttttctagtaggctcattttcaact 1393  T
Q  345 aaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||| |||| |||| ||||| ||||| ||| |||||| |||||||||||||||||  ||||||||||||||    
T  1392 aaaatagaatttgttttgttatgaaaataatctcaatttattggataataaatatcacaaatatttttaatat 1320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 207 - 416
Target Start/End: Complemental strand, 25336 - 25125
Alignment:
Q  207 ttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagaca 306  Q
    |||| |||||||||| |||| || |||||||  |||   |||| ||||||||||||||  ||| | |||||||||| |||| || ||||||| |||||||    
T  25336 ttgctttatcaaattcaattatgcaatcctttcaatcatttcaagaaagttgacattaatatattgatataatttatttttatggaacctttgaaagaca 25237  T
Q  307 agattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttataaa-attatcccaatttcttggataataaatatcagcaa 404  Q
    ||||||  ||||| |||||||| | ||| |||||||| |||||| ||||| | || || || || |||||| |||||||||||||||||||||||| |||    
T  25236 agattaggattaacttctctaatatgccaattttcaactaaaatttaatttggtttgtcatgaatattatctcaatttcttggataataaatatcaccaa 25137  T
Q  405 tatttttaatat 416  Q
    ||||||||||||    
T  25136 tatttttaatat 25125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 146 - 394
Target Start/End: Original strand, 98176 - 98425
Alignment:
Q  146 ccacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataattta 245  Q
    ||||||||||| |||||||||||| || |||||||| || ||||||| | ||| ||| || ||||||||||||||| || |||| |||||||   ||  |    
T  98176 ccacatgatcccaaatgcgtctcacatcggtttcataattatgaatgtg-ctcgcatgatcttgcattatcaaattcaaatttgcaatcctttcgatcaa 98274  T
Q  246 ttcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctcta-aaggcccattttcaagt 344  Q
    |||| |||| |||||||||  ||| | |||||||||| ||||||| || |||| |||||||||||||| |||||||||||||  | || ||||||||| |    
T  98275 ttcaagaaatttgacattaatatattgatataatttatttttttggaatctttgaaagacaagattaagattaatttctctagcatgctcattttcaact 98374  T
Q  345 aaaatataattagtttggttat-aaaattatcccaatttcttggataataa 394  Q
    |||||| ||||  |||  |||| ||||| ||| |||||||||| |||||||    
T  98375 aaaatagaatttattttattatgaaaataatctcaatttcttgaataataa 98425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 161 - 416
Target Start/End: Complemental strand, 41076 - 40823
Alignment:
Q  161 tgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgac 260  Q
    ||||||||| || |||||||| || || |||||||||  | | || ||||| ||||||||| ||||||| ||| |||  ||   ||||| |||| |||||    
T  41076 tgcgtctcacatcggtttcattattataaatgcgtcttgcttgatcttgcaatatcaaattcaattttgcaatgctttcaaccaattcaagaaatttgac 40977  T
Q  261 attaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaaaggcccattttcaagtaaaatataattagttt 360  Q
    ||||| ||| | |||||||||| | ||||  |||| |  |||||||||||||| ||||||||   |  || | ||||||||| |||||||||||| ||||    
T  40976 attacaatattgatataatttagtattttttaaccatagaaagacaagattaagattaattt---tgtagcctcattttcaactaaaatataatttgttt 40880  T
Q  361 ggttata-aaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
     |||||  |||||||  ||||||||||||||||||||||||  ||||||||||||||    
T  40879 tgttatgtaaattatttcaatttcttggataataaatatcacaaatatttttaatat 40823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1364 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold1364
Description:

Target: scaffold1364; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 146 - 394
Target Start/End: Complemental strand, 1127 - 873
Alignment:
Q  146 ccacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataattta 245  Q
    ||||||||||| ||||||||| || || |||||||| || ||||||||||||| ||| || ||| ||||||||||| || |||| |||| ||  |||  |    
T  1127 ccacatgatcccaaatgcgtcccacatcggtttcataattatgaatgcgtctcgcatgatcttgtattatcaaattcaaatttgcaatcatttcaatcaa 1028  T
Q  246 ttcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagac----aagattaaaattaatttctc-taaaggcccattttc 340  Q
    |||| |||| |||||||||| ||| | |||||||||| ||||||| || |||| ||||||     | ||||| |||||||||||    |||| |||||||    
T  1027 ttcaagaaatttgacattactatattgatataatttatttttttggaatctttgaaagactatatatattaagattaatttctcaggtaggctcattttc 928  T
Q  341 aagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataa 394  Q
    || ||||||| |||| |||| ||||| ||||| ||| |||||||| |||||||||    
T  927 aactaaaatagaatttgttttgttatgaaaataatctcaatttctaggataataa 873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 279 - 416
Target Start/End: Original strand, 2387 - 2526
Alignment:
Q  279 tttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttata-aaattatcc 376  Q
    |||| ||||||| || |||| |||||||||||||| |||||||||| ||| |||  ||||||||| |||||||||||| |||| |||||  ||||||||     
T  2387 tttatttttttggaaactttgaaagacaagattaagattaatttctataataggttcattttcaactaaaatataatttgttttgttatgcaaattatct 2486  T
Q  377 caatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||| ||| |||||||||||||  ||||||||||||||    
T  2487 caatttattgaataataaatatcactaatatttttaatat 2526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0743 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0743
Description:

Target: scaffold0743; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 305 - 416
Target Start/End: Original strand, 3287 - 3400
Alignment:
Q  305 caagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagc 402  Q
    |||||||||  ||||||||||||  ||||| |||||||| |||||||||||| |||| ||||| |||||| ||||||||| || ||||||||||||||      
T  3287 caagattaagtttaatttctctagtaggccaattttcaactaaaatataatttgttttgttatgaaaattctcccaattttttagataataaatatcaca 3386  T
Q  403 aatatttttaatat 416  Q
     |||||||||||||    
T  3387 tatatttttaatat 3400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 416
Target Start/End: Complemental strand, 50984 - 50935
Alignment:
Q  367 aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||    
T  50984 aaaattatcccaatttcttggataataaatatcgtcgatatttttaatat 50935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 38; Significance: 0.000000000003; HSPs: 4)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 416
Target Start/End: Original strand, 87645 - 87730
Alignment:
Q  332 cccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    ||||||||||| ||||||| |||| | || ||||| ||||||||| ||||||||||||||||||||||   | |||||||||||||    
T  87645 cccattttcaactaaaatagaatttgcttcgttatgaaaattatctcaatttcttggataataaatattgtcgatatttttaatat 87730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 416
Target Start/End: Original strand, 88122 - 88204
Alignment:
Q  335 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||| ||||||| |||| | || ||||| ||||||||| ||||||||||||||||||||||   | |||||||||||||    
T  88122 attttcaactaaaatagaatttgctttgttatgaaaattatctcaatttcttggataataaatattgtcgatatttttaatat 88204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 416
Target Start/End: Original strand, 88598 - 88680
Alignment:
Q  335 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||| ||||||| |||| | || ||||| ||||||||| ||||||||||||||||||||||   | |||||||||||||    
T  88598 attttcaactaaaatagaatttgctttgttatgaaaattatctcaatttcttggataataaatattgtcgatatttttaatat 88680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 416
Target Start/End: Original strand, 89074 - 89156
Alignment:
Q  335 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 416  Q
    |||||||| ||||||| |||| | || ||||| ||||||||| ||||||||||||||||||||||   | |||||||||||||    
T  89074 attttcaactaaaatagaatttgctttgttatgaaaattatctcaatttcttggataataaatattgtcgatatttttaatat 89156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 289
Target Start/End: Original strand, 21299 - 21402
Alignment:
Q  186 atgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacattaccataattatataatttaatt 285  Q
    ||||||||||||| ||| || ||||||||||||||| |||| |  ||| |||  |||  ||||| ||||||| ||||||  ||| | |||||||||||||    
T  21299 atgaatgcgtctcgcatgatcttgcattatcaaattcaattattcaattctttcaatcaattcaagaaagttcacattaatatattgatataatttaatt 21398  T
Q  286 tttt 289  Q
    ||||    
T  21399 tttt 21402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0552 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 228
Target Start/End: Original strand, 10171 - 10224
Alignment:
Q  175 gtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaatttt 228  Q
    |||| |||||| | |||||||||||||| || ||||||||||||||| ||||||    
T  10171 gttttatgatcctaaatgcgtctcacatgatcttgcattatcaaattcaatttt 10224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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