View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15522_low_3 (Length: 985)

Name: NF15522_low_3
Description: NF15522
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15522_low_3
NF15522_low_3
[»] chr8 (11 HSPs)
chr8 (13-985)||(32166628-32167591)
chr8 (23-213)||(33897618-33897809)
chr8 (25-205)||(35574645-35574827)
chr8 (13-75)||(12736074-12736136)
chr8 (118-206)||(29969153-29969241)
chr8 (120-170)||(6803876-6803926)
chr8 (28-84)||(6630547-6630603)
chr8 (120-211)||(6630316-6630406)
chr8 (13-63)||(29969129-29969179)
chr8 (847-892)||(10895727-10895772)
chr8 (13-74)||(31475059-31475120)
[»] chr7 (14 HSPs)
chr7 (25-213)||(34891414-34891603)
chr7 (14-205)||(31171287-31171480)
chr7 (25-213)||(3191572-3191760)
chr7 (25-205)||(42012690-42012870)
chr7 (14-205)||(31152725-31152919)
chr7 (22-95)||(32138888-32138961)
chr7 (27-84)||(32962398-32962455)
chr7 (25-75)||(23944096-23944146)
chr7 (25-80)||(34891380-34891435)
chr7 (48-167)||(22593597-22593722)
chr7 (40-198)||(8900670-8900831)
chr7 (120-211)||(33362347-33362436)
chr7 (41-79)||(7463864-7463902)
chr7 (14-60)||(44755106-44755152)
[»] chr5 (16 HSPs)
chr5 (16-206)||(7113610-7113804)
chr5 (14-92)||(14138548-14138626)
chr5 (12-204)||(40483739-40483933)
chr5 (12-95)||(973111-973194)
chr5 (118-206)||(2243249-2243335)
chr5 (25-92)||(2243321-2243388)
chr5 (118-219)||(17739908-17740009)
chr5 (41-79)||(972845-972883)
chr5 (46-95)||(7215322-7215371)
chr5 (119-219)||(7215230-7215329)
chr5 (40-84)||(37077663-37077707)
chr5 (109-224)||(39730369-39730484)
chr5 (27-79)||(39808239-39808291)
chr5 (25-95)||(17736759-17736829)
chr5 (12-74)||(40483703-40483764)
chr5 (26-75)||(39730312-39730361)
[»] chr2 (16 HSPs)
chr2 (13-213)||(13712743-13712945)
chr2 (27-205)||(9050132-9050313)
chr2 (25-95)||(16576248-16576318)
chr2 (43-205)||(38576791-38576955)
chr2 (22-73)||(2909844-2909895)
chr2 (25-92)||(16863459-16863526)
chr2 (116-173)||(38576707-38576764)
chr2 (26-219)||(16576290-16576486)
chr2 (135-205)||(9931337-9931406)
chr2 (22-91)||(35370402-35370471)
chr2 (121-205)||(25606423-25606506)
chr2 (16-95)||(28282824-28282903)
chr2 (41-84)||(34176654-34176697)
chr2 (25-84)||(38576942-38577001)
chr2 (120-213)||(28282699-28282791)
chr2 (847-892)||(33582042-33582087)
[»] chr4 (12 HSPs)
chr4 (37-213)||(25234217-25234393)
chr4 (22-219)||(25062361-25062563)
chr4 (25-140)||(15131580-15131698)
chr4 (25-169)||(54000052-54000199)
chr4 (22-84)||(20512829-20512891)
chr4 (12-96)||(22050851-22050935)
chr4 (26-89)||(4115389-4115452)
chr4 (13-74)||(25062340-25062401)
chr4 (120-213)||(55897600-55897693)
chr4 (847-881)||(49576867-49576901)
chr4 (37-79)||(54000233-54000275)
chr4 (118-211)||(22050903-22050995)
[»] chr3 (13 HSPs)
chr3 (26-181)||(39341110-39341268)
chr3 (25-178)||(42091796-42091951)
chr3 (25-94)||(46303371-46303440)
chr3 (12-95)||(34761945-34762028)
chr3 (118-219)||(54437848-54437949)
chr3 (39-96)||(31758242-31758298)
chr3 (120-177)||(39341283-39341340)
chr3 (851-892)||(40286819-40286860)
chr3 (13-81)||(54437651-54437719)
chr3 (41-95)||(54437806-54437860)
chr3 (847-892)||(7973625-7973670)
chr3 (847-892)||(10499071-10499116)
chr3 (27-84)||(48646423-48646479)
[»] chr1 (19 HSPs)
chr1 (14-95)||(10775163-10775244)
chr1 (22-95)||(46080971-46081044)
chr1 (25-142)||(7997194-7997314)
chr1 (25-95)||(34601446-34601516)
chr1 (43-132)||(44342055-44342145)
chr1 (118-211)||(3232179-3232271)
chr1 (126-211)||(7104316-7104400)
chr1 (42-95)||(42819621-42819674)
chr1 (13-95)||(12144970-12145049)
chr1 (28-84)||(52432672-52432728)
chr1 (133-222)||(49897909-49897998)
chr1 (133-206)||(67982-68054)
chr1 (160-219)||(68139-68198)
chr1 (13-92)||(52432836-52432915)
chr1 (25-95)||(68097-68167)
chr1 (13-63)||(7104297-7104347)
chr1 (25-95)||(49897870-49897940)
chr1 (25-74)||(3231979-3232028)
chr1 (25-74)||(38839666-38839715)
[»] chr6 (11 HSPs)
chr6 (25-177)||(20068000-20068155)
chr6 (26-95)||(32342600-32342669)
chr6 (27-126)||(23577118-23577219)
chr6 (27-75)||(32047194-32047242)
chr6 (46-92)||(20206481-20206527)
chr6 (46-92)||(22100504-22100550)
chr6 (118-173)||(32047262-32047317)
chr6 (148-202)||(23577068-23577121)
chr6 (121-167)||(26236751-26236797)
chr6 (847-892)||(12633078-12633123)
chr6 (33-94)||(23577009-23577070)
[»] scaffold0136 (1 HSPs)
scaffold0136 (12-79)||(36965-37033)
[»] scaffold1743 (1 HSPs)
scaffold1743 (25-84)||(794-853)
[»] scaffold0047 (1 HSPs)
scaffold0047 (37-84)||(62744-62791)


Alignment Details
Target: chr8 (Bit Score: 665; Significance: 0; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 665; E-Value: 0
Query Start/End: Original strand, 13 - 985
Target Start/End: Original strand, 32166628 - 32167591
Alignment:
Q  13 gagatgaacattacatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaagaaaaactatcgatgagcataca 112  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  32166628 gagatgaagattacatgttgaataaaggagatgaagaagtttgatgttcttgagatgaaaatgataattgatagtaagaaaaactatcgatgagcataca 32166727  T
Q  113 tttttccttgatgaattgggggtaatttacctctaatgacaagtacgattcgattttggaacgaaaagagatgtaaatcacatgttaaatgaagaagata 212  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  32166728 tttttctttgatgaattgggtgtaatttacctctaatgacaagtacgattcgattttggaacgaaa-gagatgtaaatcacatgttaaatgaagaagata 32166826  T
Q  213 agaagttcgaagaaacactttgattggaagcagctatgtaagaaaaaaccacattcatatattgcattttatattgttcgatgtcggttccgtgtgtcta 312  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||            | |||||||||||||||||||    
T  32166827 agaaattcgaagaaacactttgattggaagcagctatgtaagaaaaaaccacattcatatattgtat------------ggtgtcggttccgtgtgtcta 32166914  T
Q  313 aataacacaactctaatttaaatatgagtctatttataagacattttagagcatctaaccccagatattcttattgaggttcttaaacgtgtcttgttta 412  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32166915 aataacacaattctaatttaaatatgagtctatttagaagacattttagagcatctaaccccagatattcttattgaggttcttaaacgtgtcttgttta 32167014  T
Q  413 tgcatatcaatcagtttacgtttttattaatttaaatatcaaataagttttacatatctctttgtacatgttggattgacggtgagattgacataataaa 512  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||  ||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  32167015 tgcatatcaatcagtttacctttttattaatttaagtatcaaataaactttacatatttctttgtgcatgttggattgacggtgagattgacataataaa 32167114  T
Q  513 taaaccaccataattttagcaaaaactacactttaaaacttcacaaaatcatagtagttttgccaaactcccggtcaatctacgcttcatctccgaaagt 612  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||| ||||||||| ||||||||||| |||||    
T  32167115 taaatcaccgtaattttagcaaaaactacactttaaaacttcacaaaattatagttgttttgccgaactcccagtcaatctatgcttcatctccaaaagt 32167214  T
Q  613 cataccatgtaaaaagaagagagagtatttgtcttagcttgtaccatttaggtacaaatgagattggaccactataaaagtatcaaac------cgtatt 706  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||       |||||    
T  32167215 cataccatgtaaaaagaaaacagagtatttgtcttagcttgtaccatttaggtacaaatgagattggaccactatgaaagtatcaaacgaaacaggtatt 32167314  T
Q  707 agtatctcttaattggtaagttgactcattgattgtgtataatttcttgagctaactatgagaataaatattcaatttagcctttgaaatattgactatg 806  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||     
T  32167315 agtatctcttaattggtaagttgattcattgattgtgtataatttcttgagctaattatgagaataaatattcaatttagtttttgaaatattgactata 32167414  T
Q  807 taaatgatgaagttgatacgatgctccataagatctcgaattcgattctctccaatgttaatttgggtggactaatttagcctctttnnnnnnnnnnttg 906  Q
    |||||||| ||||||||||||||||||| ||| ||||  |||||||| |||||  ||| ||||||| ||| |||||||| ||||||           |||    
T  32167415 taaatgattaagttgatacgatgctccacaaggtctcatattcgattatctccggtgtcaatttggatgggctaatttaacctctt--caaaaaaaattg 32167512  T
Q  907 ataaaatgctatagtttaccttttttgtgcatgtttattgtttcgaatattgtagatcaccgttaatttcaacaaatcc 985  Q
    ||| ||||||||||||||||||||| |||||||||||||||||   ||||||||||||||||||| ||||| |||||||    
T  32167513 atacaatgctatagtttacctttttagtgcatgtttattgtttattatattgtagatcaccgttactttcagcaaatcc 32167591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 23 - 213
Target Start/End: Complemental strand, 33897809 - 33897618
Alignment:
Q  23 ttacatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaa-gaaaaac-tatcgatgagcatacatttttcct 120  Q
    ||||||||||||| ||||| || ||||| ||||||||| || ||||||||||  ||||||||||||| ||||||  |||||| |||| ||||||||||||    
T  33897809 ttacatgttgaatgaaggaaattaagaattttgatgtttttgagatgaaaatagtaattgatagtaaagaaaaatatatcgacgagcctacatttttcct 33897710  T
Q  121 tgatgaattgggggtaatttacctctaatgacaagtacgattcgattttggaacgaaaagagatgtaaatcacatgttaaatgaagaagataa 213  Q
    |||| ||||| | ||||||||| ||| |||| ||  |||||| |||||| ||||||||| |||||||||||||||||||||||||| ||||||    
T  33897709 tgattaattgagagtaatttacatctgatgataaacacgattagattttagaacgaaaa-agatgtaaatcacatgttaaatgaaggagataa 33897618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 25 - 205
Target Start/End: Original strand, 35574645 - 35574827
Alignment:
Q  25 acatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaagaaaaac--tatcgatgagca-tacatttttcctt 121  Q
    ||||||||||| || |||||||| || |||||||||||||||||||||||  ||| | || |||||||||||  |||| |||||   | |||| ||| ||    
T  35574645 acatgttgaatgaatgagatgaaaaaatttgatgttcttaagatgaaaatcgtaactaattgtaagaaaaaccctatcaatgaggtctccattattcatt 35574744  T
Q  122 gatgaattgggggtaatttacctctaatgacaagtacgattcgattttggaacgaaaagagatgtaaatcacatgttaaatgaa 205  Q
    ||||||||| |||||||||||| |||||||||| || ||||||||||||||||| ||||||||  |||||| ||||| ||||||    
T  35574745 gatgaattgagggtaatttaccgctaatgacaactatgattcgattttggaacg-aaagagattaaaatcatatgttcaatgaa 35574827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 75
Target Start/End: Complemental strand, 12736136 - 12736074
Alignment:
Q  13 gagatgaacattacatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatg 75  Q
    |||||| |||| ||||||||||  |||||||||||||||||||||||| |||||||| |||||    
T  12736136 gagatggacatcacatgttgaacgaaggagatgaagaagtttgatgttattaagatggaaatg 12736074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 29969241 - 29969153
Alignment:
Q  118 ccttgatgaattgggggtaatttacctct-aatgacaagtacgattcgattttggaacgaaaagagatgtaaatcacatgttaaatgaag 206  Q
    ||||||||||||| || ||||||||| || |||||||||||  |||||||| ||||||| ||||||||| | |||||||||| |||||||    
T  29969241 ccttgatgaattgtggataatttaccccttaatgacaagtagaattcgattatggaacg-aaagagatgaatatcacatgttgaatgaag 29969153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 170
Target Start/End: Original strand, 6803876 - 6803926
Alignment:
Q  120 ttgatgaattgggggtaatttacctctaatgacaagtacgattcgattttg 170  Q
    ||||||||||||| |||||||||| ||||||||||||| |||| |||||||    
T  6803876 ttgatgaattgggagtaatttacccctaatgacaagtaggatttgattttg 6803926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 6630547 - 6630603
Alignment:
Q  28 tgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgat 84  Q
    |||| ||| |||||||||||||| ||| ||| |||||||||||||||| ||||||||    
T  6630547 tgttaaatgaaggagatgaagaaatttaatgatcttaagatgaaaatggtaattgat 6630603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 211
Target Start/End: Original strand, 6630316 - 6630406
Alignment:
Q  120 ttgatgaattgggggtaatttacctctaatgacaagtacgattcgattttggaacgaaaagagatgtaaatcacatgttaaatgaagaagat 211  Q
    ||||||||||| | |||||||||| ||||||||||||| |||| ||||||| || | || |||||| | | |||||||| |||||| |||||    
T  6630316 ttgatgaattgagagtaatttacccctaatgacaagtaggatttgattttgaaatg-aaggagatggataacacatgttgaatgaaaaagat 6630406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 29969179 - 29969129
Alignment:
Q  13 gagatgaacattacatgttgaataaaggagatgaagaagtttgatgttctt 63  Q
    |||||||| || ||||||||||| |||| || |||||||||||||||||||    
T  29969179 gagatgaatatcacatgttgaatgaaggggaagaagaagtttgatgttctt 29969129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 847 - 892
Target Start/End: Original strand, 10895727 - 10895772
Alignment:
Q  847 ttcgattctctccaatgttaatttgggtggactaatttagcctctt 892  Q
    ||||||||||||| |||||||||| | |||||||||||||| ||||    
T  10895727 ttcgattctctccgatgttaatttagatggactaatttagcgtctt 10895772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 31475120 - 31475059
Alignment:
Q  13 gagatgaacattacatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaat 74  Q
    |||||||| || ||||  ||||| ||| ||||||||||||||||||||||| |||| |||||    
T  31475120 gagatgaaaatcacattgtgaatcaagaagatgaagaagtttgatgttcttgagataaaaat 31475059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 82; Significance: 3e-38; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 25 - 213
Target Start/End: Complemental strand, 34891603 - 34891414
Alignment:
Q  25 acatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaagaaaaa---ctatcgatgagcatacatttttcctt 121  Q
    ||||||||||| |||||||||||||| |||||||||||| |||| |||||||||| | |||||||||||||    ||||| ||||| || ||| ||||||    
T  34891603 acatgttgaatgaaggagatgaagaaatttgatgttcttgagatcaaaatgataactaatagtaagaaaaaaccatatcggtgagcctatattcttcctt 34891504  T
Q  122 gatgaattgggggtaatttacctctaatgacaagtacgattcgattttggaacgaaaagagatgtaaatcacatgttaaatgaagaagataa 213  Q
    |||||| | ||||||||||||| || ||||||| ||| ||||||||| |||| | |||||||| || |||||||||||||||||||||||||    
T  34891503 gatgaact-ggggtaatttacccctcatgacaaatacaattcgatttgggaatg-aaagagatctagatcacatgttaaatgaagaagataa 34891414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 14 - 205
Target Start/End: Original strand, 31171287 - 31171480
Alignment:
Q  14 agatgaacattacatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaagaaaaactatc--gatga-gcata 110  Q
    ||||||| |||| ||||||||  || || ||||||||| |||||||| |||||||||||||| |||||| | ||||||||||| |    ||||| |  ||    
T  31171287 agatgaaaattagatgttgaacgaaagaaatgaagaagattgatgtttttaagatgaaaatggtaattggttgtaagaaaaaccaaaatgatgaagtcta 31171386  T
Q  111 catttttccttgatgaattgggggtaatttacctctaatgacaagtacgattcgattttggaacgaaaagagatgtaaatcacatgttaaatgaa 205  Q
    |||| |  |||||||||||||||||||||||||| |||| ||||||| ||||||||| || |||| ||||||||| ||||||||| || ||||||    
T  31171387 cattatcacttgatgaattgggggtaatttacctataataacaagtaggattcgattatgaaacg-aaagagatggaaatcacattttgaatgaa 31171480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 25 - 213
Target Start/End: Original strand, 3191572 - 3191760
Alignment:
Q  25 acatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaaga-aaaactatcgatgagcatacatttttccttga 123  Q
    |||||||||||||||||||||||||| ||||||||| || |||||||||  |||| ||||||||| | ||||  ||   ||||  ||||||||||||  |    
T  3191572 acatgttgaataaaggagatgaagaactttgatgtttttgagatgaaaagaataactgatagtaaaagaaaatcatatgtgagtctacatttttcctcca 3191671  T
Q  124 tgaattgggggtaatttacctctaatgacaagtacgattcgattttggaacgaaaagagatgtaaatcacatgttaaatgaagaagataa 213  Q
    || ||||| |||||||||||  | ||| ||| |||||||| |||||| || | |||| |||||||||||||| |||||||||| ||||||    
T  3191672 tgtattggcggtaatttacccttcatgtcaaatacgattcaattttgaaatg-aaagggatgtaaatcacatcttaaatgaaggagataa 3191760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 25 - 205
Target Start/End: Complemental strand, 42012870 - 42012690
Alignment:
Q  25 acatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaagaaaaac---tatcgatgagcatacatttttcctt 121  Q
    ||||||||||||||  ||||||| |||||||||||||||  ||| ||| || ||| ||||  |||||||||    ||| ||||| | |||||||||||||    
T  42012870 acatgttgaataaat-agatgaaaaagtttgatgttcttgtgataaaagtggtaactgattctaagaaaaaaccatattgatgaacttacatttttcctt 42012772  T
Q  122 gatgaattgggggtaatttacctctaatgacaagtacgattcgattttggaacgaaaagagatgtaaatcacatgttaaatgaa 205  Q
    ||| |||||||| ||||||| | || ||||||  || ||||||||||||||||||||| ||||||||||||||| |||||||||    
T  42012771 gattaattgggg-taatttatccctcatgacatatatgattcgattttggaacgaaaa-agatgtaaatcacatcttaaatgaa 42012690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 14 - 205
Target Start/End: Original strand, 31152725 - 31152919
Alignment:
Q  14 agatgaacattacatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaagaaaaact---atcgatga-gcat 109  Q
    ||||||| |||| ||||||||| || || ||||||||| |||||||| |||||||||||||| |||||| | ||| ||||||     |  ||||| |  |    
T  31152725 agatgaaaattagatgttgaatgaaagaaatgaagaagattgatgtttttaagatgaaaatggtaattggttgtatgaaaaaaccaaaatgatgaagtct 31152824  T
Q  110 acatttttccttgatgaattgggggtaatttacctctaatgacaagtacgattcgattttggaacgaaaagagatgtaaatcacatgttaaatgaa 205  Q
    ||||| |  |||||||||||||||||||||||||| |||| ||||||| ||||||||| || |||| ||||||||| | ||||||| || ||||||    
T  31152825 acattatcacttgatgaattgggggtaatttacctataataacaagtaggattcgattatgaaacg-aaagagatggagatcacattttgaatgaa 31152919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 32138888 - 32138961
Alignment:
Q  22 attacatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaagaaaaa 95  Q
    |||||||||||||  |||||||||||||| |||||||||||||||||||||||| ||||||||  |||||||||    
T  32138888 attacatgttgaacgaaggagatgaagaattttgatgttcttaagatgaaaatggtaattgattttaagaaaaa 32138961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 32962398 - 32962455
Alignment:
Q  27 atgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgat 84  Q
    ||||||||||||||||||||| ||||||||| ||||||| ||||| ||||||||||||    
T  32962398 atgttgaataaaggagatgaaaaagtttgattttcttaaaatgaatatgataattgat 32962455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 75
Target Start/End: Complemental strand, 23944146 - 23944096
Alignment:
Q  25 acatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatg 75  Q
    ||||||||||| || |||| |||||||||||||||||||||||||||||||    
T  23944146 acatgttgaatgaaagagaagaagaagtttgatgttcttaagatgaaaatg 23944096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 34891435 - 34891380
Alignment:
Q  25 acatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataat 80  Q
    ||||||| ||| ||| |||| |||||||||||||||||||| ||||||||||||||    
T  34891435 acatgttaaatgaagaagataaagaagtttgatgttcttaatatgaaaatgataat 34891380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 22593597 - 22593722
Alignment:
Q  48 gaagtttgatgttcttaagatgaaaatgataattgatagt-aagaaaaa-----ctatcgatgag-catacatttttccttgatgaattgggggtaattt 140  Q
    |||||||||||||||| |||||||||||| ||||||| || ||||||||      |||||||||| | ||||||   | || ||||||||| ||||||||    
T  22593597 gaagtttgatgttcttgagatgaaaatgacaattgattgtaaagaaaaaaaatcttatcgatgagacctacattacccattaatgaattggaggtaattt 22593696  T
Q  141 acctctaatgacaagtacgattcgatt 167  Q
    ||| |||||||||| ||||||||||||    
T  22593697 acc-ctaatgacaattacgattcgatt 22593722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 198
Target Start/End: Original strand, 8900670 - 8900831
Alignment:
Q  40 gagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaagaaaaactatcgatg----agcatacatttttccttgatgaattgggggt 135  Q
    |||||||||||||||| ||||||| |||| |||||| ||||| || ||||||||||  |   |||    ||| |||||| | | |||||||||| |||||    
T  8900670 gagatgaagaagtttgttgttcttgagataaaaatggtaatttattgtaagaaaaaacaaaaatgttgaagcctacattatccattgatgaatt-ggggt 8900768  T
Q  136 aatttacctctaatgacaagtacgattcgattttggaacgaaaagagatgtaaatcacatgtt 198  Q
    |||||| | ||||| |||||||  |||||||| || ||| |||| | ||||| ||||||||||    
T  8900769 aatttatccctaataacaagtagaattcgattatgaaacaaaaaaaaatgtagatcacatgtt 8900831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 211
Target Start/End: Original strand, 33362347 - 33362436
Alignment:
Q  120 ttgatgaattgggggtaatttacctctaatgacaagtacgattcgattttggaacgaaaagagatgtaaatcacatgttaaatgaagaagat 211  Q
    ||||||| || ||||||| |||| |||||||  || || ||||||||||| |||| ||||||| ||||||||||||||| ||||||| ||||    
T  33362347 ttgatgagttaggggtaagttac-tctaatggtaaatatgattcgattttagaac-aaaagagttgtaaatcacatgttgaatgaaggagat 33362436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 7463902 - 7463864
Alignment:
Q  41 agatgaagaagtttgatgttcttaagatgaaaatgataa 79  Q
    ||||||||||||||||||||||| | |||||||||||||    
T  7463902 agatgaagaagtttgatgttcttcaaatgaaaatgataa 7463864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 44755152 - 44755106
Alignment:
Q  14 agatgaacattacatgttgaataaaggagatgaagaagtttgatgtt 60  Q
    ||||||| ||||||||||||| ||| || ||||||||||||||||||    
T  44755152 agatgaagattacatgttgaacaaatgatatgaagaagtttgatgtt 44755106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 8e-36; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 16 - 206
Target Start/End: Original strand, 7113610 - 7113804
Alignment:
Q  16 atgaacattacatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaagaaaaa--ctat--cgatgagcatac 111  Q
    ||||| || ||| ||||||| || ||||||||||||||| || ||||| |||||||||||||||||||| |||| |||||  ||||  ||| || | |||    
T  7113610 atgaaaatcacacgttgaatgaatgagatgaagaagtttaatattcttgagatgaaaatgataattgatggtaaaaaaaatactataccgacgaacctac 7113709  T
Q  112 atttttccttgatgaattg-ggggtaatttacctctaatgacaagtacgattcgattttggaacgaaaagagatgtaaatcacatgttaaatgaag 206  Q
    ||||||||||||||||||| ||||||||||||| || ||| ||| |||||||| ||| |||||| |||||||||||||||||||| ||||||||||    
T  7113710 atttttccttgatgaattgaggggtaatttaccgctgatgtcaaatacgattcaattatggaac-aaaagagatgtaaatcacatcttaaatgaag 7113804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 14138626 - 14138548
Alignment:
Q  14 agatgaacattacatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaagaa 92  Q
    ||||||| |||||||||||||| || |||||||  ||||||||| ||||||||||||||||| |||||||| |||||||    
T  14138626 agatgaagattacatgttgaatgaaagagatgagaaagtttgatattcttaagatgaaaatggtaattgattgtaagaa 14138548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 12 - 204
Target Start/End: Complemental strand, 40483933 - 40483739
Alignment:
Q  12 tgagatgaacattacatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaagaaaaa--ctatcgatgag-ca 108  Q
    ||||||| | || ||||||||| ||||| ||||||||||||| ||||||||| | || ||  ||  ||||||| ||| ||||||  ||||||||||| |     
T  40483933 tgagatggagatcacatgttgagtaaagaagatgaagaagttggatgttcttgatataaatttgggaattgattgtacgaaaaaacctatcgatgaggcc 40483834  T
Q  109 tacatttttccttgatgaattgggggtaatttacctctaatgacaagtacgattcgattttggaacgaaaagagatgtaaatcacatgttaaatga 204  Q
    ||  || |  |||||||||||| |||||| ||||| | ||||| ||||| ||||||||||||||||| || |||||| | |||||||||| |||||    
T  40483833 tatgttatctcttgatgaattgagggtaaattacccccaatgataagtatgattcgattttggaacg-aatgagatgaagatcacatgttgaatga 40483739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 973194 - 973111
Alignment:
Q  12 tgagatgaacattacatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaagaaaaa 95  Q
    ||||||||| || |||||||||||||||||||||||||| ||| ||||| || |||| |||||||||| | || ||||||||||    
T  973194 tgagatgaagatcacatgttgaataaaggagatgaagaaatttaatgtttttgagataaaaatgataactaattgtaagaaaaa 973111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 2243249 - 2243335
Alignment:
Q  118 ccttgatgaattgggggtaatttacctctaatgacaagtacgattcgattttggaacgaaaagagatgtaaatcacatgttaaatgaag 206  Q
    |||||||||||||||| |||||||||||||||||||||||  |||||||| | ||||||| | ||||| | |||||||||| |||||||    
T  2243249 ccttgatgaattgggg-taatttacctctaatgacaagtaaaattcgattctagaacgaaga-agatggagatcacatgttgaatgaag 2243335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 2243321 - 2243388
Alignment:
Q  25 acatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaagaa 92  Q
    ||||||||||| ||||| ||||||||||||||||||||| ||||||||||| ||| | || |||||||    
T  2243321 acatgttgaatgaaggatatgaagaagtttgatgttcttgagatgaaaatggtaactaattgtaagaa 2243388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 219
Target Start/End: Complemental strand, 17740009 - 17739908
Alignment:
Q  118 ccttgatgaattgggggtaatttacctctaatgacaagtacgattcgattttggaacgaaaagagatgtaaatcacatgttaaatgaagaagat-aagaa 216  Q
    ||||||||||||| | | |||| | | ||||| | ||||| ||||||||| |||||||||  |||||| ||||||||||||||||||||||||| |||||    
T  17740009 ccttgatgaattgagtgaaattcatccctaataataagtaggattcgattctggaacgaag-gagatgaaaatcacatgttaaatgaagaagatgaagaa 17739911  T
Q  217 gtt 219  Q
    |||    
T  17739910 gtt 17739908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 972883 - 972845
Alignment:
Q  41 agatgaagaagtttgatgttcttaagatgaaaatgataa 79  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  972883 agatgaagaagtttgatgttcttgagatgaaaatgataa 972845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 95
Target Start/End: Original strand, 7215322 - 7215371
Alignment:
Q  46 aagaagtttgatgttcttaagatgaaaatgataattgatagtaagaaaaa 95  Q
    |||||||||||||||||| ||||||||||| || ||||| ||||||||||    
T  7215322 aagaagtttgatgttcttgagatgaaaatggtagttgattgtaagaaaaa 7215371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 219
Target Start/End: Original strand, 7215230 - 7215329
Alignment:
Q  119 cttgatgaattgggggtaatttacctctaatgacaagtacgattcgattttggaacgaaaagagatgtaaatcacatgttaaatgaagaagataagaagt 218  Q
    |||| |||||| |||||||||||||  |||||| || || ||||| ||||| ||| ||||| ||||| | ||||||| || ||||||||||| |||||||    
T  7215230 cttgttgaattcggggtaatttaccgttaatgataaatatgattcaattttagaatgaaaa-agatggagatcacatattcaatgaagaagaaaagaagt 7215328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 37077707 - 37077663
Alignment:
Q  40 gagatgaagaagtttgatgttcttaagatgaaaatgataattgat 84  Q
    ||||||||||||||| |||||||| ||||||||||||||| ||||    
T  37077707 gagatgaagaagtttaatgttcttgagatgaaaatgataactgat 37077663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 109 - 224
Target Start/End: Original strand, 39730369 - 39730484
Alignment:
Q  109 tacatttttccttgatgaattgggggtaatttacctctaatgacaagtacgattcgattttggaacgaaaagagatgtaaatcacatgttaaatgaagaa 208  Q
    |||||||||| |  ||||||||  ||||||||||| || ||||||  ||| |||||||||||||||| || |||||||| || |||| ||  |||||| |    
T  39730369 tacatttttcttgaatgaattgatggtaatttacccctcatgacatatacaattcgattttggaacg-aacgagatgtatattacatcttcgatgaagga 39730467  T
Q  209 gat-aagaagttcgaag 224  Q
    ||| |||||||||||||    
T  39730468 gataaagaagttcgaag 39730484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 39808239 - 39808291
Alignment:
Q  27 atgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataa 79  Q
    ||||| ||| ||||||||||| |||||||||| ||||||| ||||||||||||    
T  39808239 atgttaaatgaaggagatgaaaaagtttgatggtcttaaggtgaaaatgataa 39808291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 17736759 - 17736829
Alignment:
Q  25 acatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaagaaaaa 95  Q
    ||||||||| | ||| |||||||||||||| || || || ||||||||||| |||||| | ||||||||||    
T  17736759 acatgttgagtgaagaagatgaagaagtttaatattattgagatgaaaatggtaattggttgtaagaaaaa 17736829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 40483764 - 40483703
Alignment:
Q  12 tgagatgaacattacatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaat 74  Q
    ||||||||| || ||||||||||| |  ||||||||||||||||||||| || ||||||||||    
T  40483764 tgagatgaagatcacatgttgaatgagtgagatgaagaagtttgatgtt-tttagatgaaaat 40483703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 39730312 - 39730361
Alignment:
Q  26 catgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatg 75  Q
    |||||| ||| || |||||||| ||||||||||||||| |||||||||||    
T  39730312 catgttaaatgaaagagatgaaaaagtttgatgttcttgagatgaaaatg 39730361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 3e-35; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 13 - 213
Target Start/End: Original strand, 13712743 - 13712945
Alignment:
Q  13 gagatgaacattacatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaagaaaaac--tatcgatgagcata 110  Q
    |||||| | |||| ||||||||||||| |||| |||||||||||||||||||||||| ||||| ||| ||||||||||||||||  ||||    ||| ||    
T  13712743 gagatggagattagatgttgaataaagaagataaagaagtttgatgttcttaagatggaaatggtaactgatagtaagaaaaaccttatcagcaagccta 13712842  T
Q  111 catttttcc-ttgatgaattgggggtaatttacctctaatgacaagtacgattcgattttggaacgaaaagagatgtaaatcacatgttaaatgaagaag 209  Q
    || |||||| |||||| |||| |||||||||| | |||||||||| ||| ||| | |||||||||  ||||||||||| |||||||||||||||||| ||    
T  13712843 caattttcctttgatgtattgagggtaatttatccctaatgacaaatacaattaggttttggaac-caaagagatgtagatcacatgttaaatgaaggag 13712941  T
Q  210 ataa 213  Q
    ||||    
T  13712942 ataa 13712945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 27 - 205
Target Start/End: Original strand, 9050132 - 9050313
Alignment:
Q  27 atgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaagaaaaact---atcgatgag-catacatttttccttg 122  Q
    ||||||||| | ||||||||||||||||| ||||||| | ||||||||| ||| |||| |||||||||| |   || || ||| |  ||||| |  ||||    
T  9050132 atgttgaatgatggagatgaagaagtttgttgttcttcatatgaaaatggtaactgatcgtaagaaaaaattatattgacgagaccaacattatctcttg 9050231  T
Q  123 atgaattgggggtaatttacctctaatgacaagtacgattcgattttggaacgaaaagagatgtaaatcacatgttaaatgaa 205  Q
    |||||||| ||||||||||||||||||||| |||| ||||||||| || ||| |||  |||||||||||| ||||||||||||    
T  9050232 atgaattgagggtaatttacctctaatgactagtaggattcgattatgaaac-aaagaagatgtaaatcaaatgttaaatgaa 9050313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 16576318 - 16576248
Alignment:
Q  25 acatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaagaaaaa 95  Q
    ||||||||||| ||||||||||||||||||||||||||| ||| ||||||| |||||||| ||||||||||    
T  16576318 acatgttgaatgaaggagatgaagaagtttgatgttcttgagaggaaaatggtaattgattgtaagaaaaa 16576248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 205
Target Start/End: Original strand, 38576791 - 38576955
Alignment:
Q  43 atgaagaagtttgatgttcttaagatgaaaatgataattgatagtaagaaaaac---tatcgatgag-catacatttttccttgatgaattgggggtaat 138  Q
    |||||||||||||||  | || ||||||||||| ||| |||| ||||||||||    |||||||||| | ||||||   |||| ||||||||||| ||||    
T  38576791 atgaagaagtttgattatattgagatgaaaatggtaactgattgtaagaaaaaaccttatcgatgaggcctacattacccctttatgaattgggg-taat 38576889  T
Q  139 ttacctctaatgacaagtacgattcgattttggaacgaaaagagatgtaaatcacatgttaaatgaa 205  Q
    ||||  |||||||||| || |||| |||| ||| |||||| |||||| |||||||||||| ||||||    
T  38576890 ttactcctaatgacaaatatgatttgattatggtacgaaa-gagatggaaatcacatgttgaatgaa 38576955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 2909895 - 2909844
Alignment:
Q  22 attacatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaa 73  Q
    |||||||||||||| |||||||||||||||||||||||| |||| |||||||    
T  2909895 attacatgttgaatgaaggagatgaagaagtttgatgtttttaaaatgaaaa 2909844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 92
Target Start/End: Complemental strand, 16863526 - 16863459
Alignment:
Q  25 acatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaagaa 92  Q
    |||| |||||||||| |||||||||| |||||||||||| ||||||||||| ||| |||| |||||||    
T  16863526 acatattgaataaagaagatgaagaaatttgatgttcttgagatgaaaatggtaactgattgtaagaa 16863459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 173
Target Start/End: Original strand, 38576707 - 38576764
Alignment:
Q  116 ttccttgatgaattgggggtaatttacctctaatgacaagtacgattcgattttggaa 173  Q
    ||||||||||||| |  ||||||||||||| ||||||||||| |||||||||||||||    
T  38576707 ttccttgatgaatcgaaggtaatttacctcaaatgacaagtatgattcgattttggaa 38576764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 219
Target Start/End: Complemental strand, 16576486 - 16576290
Alignment:
Q  26 catgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaagaaaaa---ctat-cgatgagcatacatttttcctt 121  Q
    |||||| ||| ||||| ||||||| ||||| |||| || | ||||||||||||| |||| ||||||||||   |||| ||  | || ||| ||   ||||    
T  16576486 catgttaaatgaaggatatgaagatgtttgttgtttttgaaatgaaaatgataaatgattgtaagaaaaaactctatccgtggggcctacgttacccctt 16576387  T
Q  122 gatgaattgggggtaatttacctctaatgacaagtacgattcgattttggaacgaaaagagatgtaaatcacatgttaaatgaagaagat-aagaagtt 219  Q
    |||||||| ||| ||||||||| ||||||| ||||| ||||||||| ||||||| || |||| | | |||||||||| ||||||| |||| ||||||||    
T  16576386 gatgaatt-gggttaatttacccctaatgataagtatgattcgattctggaacg-aatgagaaggagatcacatgttgaatgaaggagatgaagaagtt 16576290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 205
Target Start/End: Complemental strand, 9931406 - 9931337
Alignment:
Q  135 taatttacctctaatgacaagtacgattcgattttggaacgaaaagagatgtaaatcacatgttaaatgaa 205  Q
    ||||||||| |  ||||||| ||||||||||||||||||| |||||||||| | ||||||||| |||||||    
T  9931406 taatttaccccacatgacaaatacgattcgattttggaac-aaaagagatgaatatcacatgtaaaatgaa 9931337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 91
Target Start/End: Complemental strand, 35370471 - 35370402
Alignment:
Q  22 attacatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaaga 91  Q
    |||||||||||||| ||||||| ||||||||||| | ||||| |||| |||||| ||| |||| ||||||    
T  35370471 attacatgttgaatgaaggagacgaagaagtttggtattcttgagattaaaatggtaactgattgtaaga 35370402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 205
Target Start/End: Complemental strand, 25606506 - 25606423
Alignment:
Q  121 tgatgaattgggggtaatttacctctaatgacaagtacgattcgattttggaacgaaaagagatgtaaatcacatgttaaatgaa 205  Q
    |||||||||| ||||||||||||  |||| ||||||| |||||| || ||||||| || |||||||| |||| ||||| ||||||    
T  25606506 tgatgaattgagggtaatttacccttaataacaagtaggattcgtttatggaacg-aaggagatgtatatcatatgttgaatgaa 25606423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 28282903 - 28282824
Alignment:
Q  16 atgaacattacatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaagaaaaa 95  Q
    ||||| ||||||||||||   ||| | ||||| ||||||||| || |  |||||||||||||||||||| ||||||||||    
T  28282903 atgaagattacatgttgagcgaagcaaatgaaaaagtttgatattatggagatgaaaatgataattgattgtaagaaaaa 28282824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 84
Target Start/End: Complemental strand, 34176697 - 34176654
Alignment:
Q  41 agatgaagaagtttgatgttcttaagatgaaaatgataattgat 84  Q
    ||||||||||||||||| ||||||||||||||||| ||| ||||    
T  34176697 agatgaagaagtttgatattcttaagatgaaaatggtaactgat 34176654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 38576942 - 38577001
Alignment:
Q  25 acatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgat 84  Q
    ||||||||||| || ||||||||||| ||| |||||||| ||||||||||| ||| ||||    
T  38576942 acatgttgaatgaaagagatgaagaactttaatgttctttagatgaaaatggtaactgat 38577001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 213
Target Start/End: Complemental strand, 28282791 - 28282699
Alignment:
Q  120 ttgatgaattgggggtaatttacctctaatgacaagtacgattcgattttggaacgaaaagagatgtaaatcacatgttaaatgaagaagataa 213  Q
    |||||||||||  ||||||||||| ||||| |||||||  ||| |||| ||||||| || |||||| | ||||||| || ||||||| ||||||    
T  28282791 ttgatgaattgacggtaatttacccctaataacaagtaaaatttgattatggaacg-aatgagatggagatcacatattgaatgaagcagataa 28282699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 847 - 892
Target Start/End: Original strand, 33582042 - 33582087
Alignment:
Q  847 ttcgattctctccaatgttaatttgggtggactaatttagcctctt 892  Q
    |||||||||||| ||||| ||||| |||||||||||||||| ||||    
T  33582042 ttcgattctctctaatgtcaatttaggtggactaatttagcttctt 33582087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 2e-33; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 37 - 213
Target Start/End: Original strand, 25234217 - 25234393
Alignment:
Q  37 aaggagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaagaaaaac-tatcgatgagcatacatttttccttgatgaattgggggt 135  Q
    ||||| || ||||| |||||||||||| ||||||||||| ||| ||||  |||||||| | |||| |||||| |||||||||||||||||||||  ||||    
T  25234217 aaggatattaagaaatttgatgttcttgagatgaaaatggtaactgatgctaagaaaaccatatcaatgagcctacatttttccttgatgaattacgggt 25234316  T
Q  136 aatttacctctaatgacaagtacgattcgattttggaacgaaaagagatgtaaatcacatgttaaatgaagaagataa 213  Q
    |||||||| || ||||||| ||||||||||||||||||||  ||||| | |||||||||  |||||||||| ||||||    
T  25234317 aatttaccgctcatgacaaatacgattcgattttggaacg-taagaggtataaatcacaccttaaatgaaggagataa 25234393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 22 - 219
Target Start/End: Complemental strand, 25062563 - 25062361
Alignment:
Q  22 attacatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaagaaaaact----atcgatga-gcatacatttt 116  Q
    |||||| ||||||  ||| ||||||||||||||||| ||||| ||||||||| | |||||||| ||||||||||      || | ||| || |||||| |    
T  25062563 attacaagttgaacgaagaagatgaagaagtttgatattcttgagatgaaaacggtaattgattgtaagaaaaaaaccaaattggtgaagcctacattat 25062464  T
Q  117 tccttgatgaattgggggtaatttacctctaatgacaagtacgattcgattttggaacgaaaagagatgtaaatcacatgttaaatgaagaagat-aaga 215  Q
    |||||||||||||| |||||||||||| ||||| ||||||| |||| |||| |||||| ||| |||||| | |||||||||| ||||||| |||| ||||    
T  25062463 tccttgatgaattgagggtaatttacccctaataacaagtaggatttgattatggaac-aaaggagatgaagatcacatgtttaatgaagcagatgaaga 25062365  T
Q  216 agtt 219  Q
    ||||    
T  25062364 agtt 25062361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 25 - 140
Target Start/End: Original strand, 15131580 - 15131698
Alignment:
Q  25 acatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaagaaaaa---ctatcgatgagcatacatttttcctt 121  Q
    ||||| ||||| |||||||||||||| |||||||||||| |||| |||||| ||| |||||||||||||||    ||||||||||| ||||||  | |||    
T  15131580 acatgctgaatgaaggagatgaagaaatttgatgttcttgagataaaaatggtaactgatagtaagaaaaaaccatatcgatgagcctacattaattctt 15131679  T
Q  122 gatgaattgggggtaattt 140  Q
    ||||||||  |||||||||    
T  15131680 gatgaattaagggtaattt 15131698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 169
Target Start/End: Original strand, 54000052 - 54000199
Alignment:
Q  25 acatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaagaaaaa---ctatcgatgagcatacatttttcctt 121  Q
    |||||||||||||| | ||||||    |||||||||||| ||||||||||| |||||||||||||||||||    |||||||||   |||||||||  ||    
T  54000052 acatgttgaataaatgtgatgaatttttttgatgttcttgagatgaaaatggtaattgatagtaagaaaaaaccatatcgatgaatctacattttttttt 54000151  T
Q  122 gatgaattgggggtaatttacctctaatgacaagtacgattcgatttt 169  Q
     ||||| || | |||||||||   | ||||||| ||||||||||||||    
T  54000152 tatgaactgagtgtaatttactcgtcatgacaaatacgattcgatttt 54000199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 20512829 - 20512891
Alignment:
Q  22 attacatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgat 84  Q
    |||||||||| ||| ||| ||||||||||||||||||||  |||||||||||||| |||||||    
T  20512829 attacatgttaaatgaagaagatgaagaagtttgatgtttataagatgaaaatgacaattgat 20512891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 22050935 - 22050851
Alignment:
Q  12 tgagatgaacattacatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaagaaaaac 96  Q
    ||||||||| || ||||||||||| ||||||||||||||  ||  |||| ||||||| |||||||||| | || |||||||||||    
T  22050935 tgagatgaagatcacatgttgaatgaaggagatgaagaaacttattgtttttaagataaaaatgataactaattgtaagaaaaac 22050851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 4115389 - 4115452
Alignment:
Q  26 catgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaa 89  Q
    |||||||||| || |||||| |||||||| ||||||||||||| |||||| ||||| |||||||    
T  4115389 catgttgaatgaatgagatggagaagtttcatgttcttaagataaaaatggtaattaatagtaa 4115452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 25062401 - 25062340
Alignment:
Q  13 gagatgaacattacatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaat 74  Q
    |||||||| || ||||||| ||| ||| |||||||||||||||||||||| ||||| |||||    
T  25062401 gagatgaagatcacatgtttaatgaagcagatgaagaagtttgatgttctgaagataaaaat 25062340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 213
Target Start/End: Complemental strand, 55897693 - 55897600
Alignment:
Q  120 ttgatgaattgggggtaatttacctctaatgacaagtacgattcgattttggaacgaaaagagatgtaaatcacatgttaaatgaagaagataa 213  Q
    ||||||||||| || || ||||||  |||| |||||||  |||  ||||||||||||||||||||| | |||| ||||| |||||| |||||||    
T  55897693 ttgatgaattgaggatagtttacccttaataacaagtagaatttaattttggaacgaaaagagatgaagatcatatgttgaatgaataagataa 55897600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 847 - 881
Target Start/End: Complemental strand, 49576901 - 49576867
Alignment:
Q  847 ttcgattctctccaatgttaatttgggtggactaa 881  Q
    |||||||||||||||||| ||||||||||||||||    
T  49576901 ttcgattctctccaatgtcaatttgggtggactaa 49576867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 79
Target Start/End: Original strand, 54000233 - 54000275
Alignment:
Q  37 aaggagatgaagaagtttgatgttcttaagatgaaaatgataa 79  Q
    |||||||| ||||||||||||||| ||||||| ||||||||||    
T  54000233 aaggagataaagaagtttgatgtttttaagataaaaatgataa 54000275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 211
Target Start/End: Complemental strand, 22050995 - 22050903
Alignment:
Q  118 ccttgatgaattgggggtaatttacctctaatgacaagtacgattcgattttggaacgaaaagagatgtaaatcacatgttaaatgaagaagat 211  Q
    |||| |||||||||||||||||||||  |||||| || || ||||||||| | ||| | || |||||| | |||||||||| ||||||| ||||    
T  22050995 cctttatgaattgggggtaatttacccttaatgataaatatgattcgattct-gaaaggaatgagatgaagatcacatgttgaatgaaggagat 22050903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 1e-25; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 26 - 181
Target Start/End: Complemental strand, 39341268 - 39341110
Alignment:
Q  26 catgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaagaaaaa---ctatcgatgagcatacatttttccttg 122  Q
    |||||||||| ||||||||||| ||||||||| ||||||||||||||||| ||| | |||||||||||||    ||||| |||||||| |||||||||||    
T  39341268 catgttgaatgaaggagatgaaaaagtttgatattcttaagatgaaaatggtaactcatagtaagaaaaaattatatcggtgagcatatatttttccttg 39341169  T
Q  123 atgaattgggggtaatttacctctaatgacaagtacgattcgattttggaacgaaaaga 181  Q
    || ||||| || ||||||||| || | || || || ||||||| ||| ||||| |||||    
T  39341168 attaattgaggataatttacccctcacgataaatatgattcgactttagaacgtaaaga 39341110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 25 - 178
Target Start/End: Original strand, 42091796 - 42091951
Alignment:
Q  25 acatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaa-gaaaaactatcgatgag-catacatttttccttg 122  Q
    ||||||| ||| || |||||||| |||||||||||| || ||||||||||||||||| || |||| ||||||  || | |||| |||||| |   |||||    
T  42091796 acatgttaaatgaaagagatgaaaaagtttgatgtttttgagatgaaaatgataattaattgtaaggaaaaagcattggtgagacatacaataccccttg 42091895  T
Q  123 atgaattgggggtaatttacctctaatgacaagtacgattcgattttggaacgaaa 178  Q
    | ||||||||||||||||||| ||||| ||||||| || | |||| ||||||||||    
T  42091896 acgaattgggggtaatttacccctaatcacaagtaagacttgattatggaacgaaa 42091951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 46303440 - 46303371
Alignment:
Q  25 acatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaagaaaa 94  Q
    ||||||||||||||| |||||||||||||||||| |||  |||| ||||||||| ||||| |||||||||    
T  46303440 acatgttgaataaagaagatgaagaagtttgatgctctatagataaaaatgatatttgattgtaagaaaa 46303371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 34761945 - 34762028
Alignment:
Q  12 tgagatgaacattacatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaagaaaaa 95  Q
    ||||||||| || ||||||||| | |||||||| || | ||||||| ||||  |||||||||||||||||||| | ||||||||    
T  34761945 tgagatgaagatcacatgttgagtgaaggagataaaaaggtttgatattctcgagatgaaaatgataattgattgaaagaaaaa 34762028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 219
Target Start/End: Complemental strand, 54437949 - 54437848
Alignment:
Q  118 ccttgatgaattgggggtaatttacctctaatgacaagtacgattcgattttggaacgaaaagagatgtaaatcacatgttaaatgaagaagat-aagaa 216  Q
    ||||| |||||| ||||||||||||||||||||| || || |||| ||||||  || ||||| ||||| ||| ||| |||||||||| |||||| |||||    
T  54437949 ccttgttgaattaggggtaatttacctctaatgataaatatgatttgattttaaaatgaaaa-agatggaaaccacgtgttaaatgaggaagatgaagaa 54437851  T
Q  217 gtt 219  Q
    |||    
T  54437850 gtt 54437848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 31758298 - 31758242
Alignment:
Q  39 ggagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaagaaaaac 96  Q
    |||||| |||||||||||| || |||||||||||||| |||||||| |||||||||||    
T  31758298 ggagattaagaagtttgatatt-ttaagatgaaaatggtaattgattgtaagaaaaac 31758242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 39341340 - 39341283
Alignment:
Q  120 ttgatgaattgggggtaatttacctctaatgacaagtacgattcgattttggaacgaa 177  Q
    |||||||||| ||||||||||||||||||||| || || ||||| ||||| |||||||    
T  39341340 ttgatgaattaggggtaatttacctctaatgataaataagattcaattttagaacgaa 39341283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 851 - 892
Target Start/End: Complemental strand, 40286860 - 40286819
Alignment:
Q  851 attctctccaatgttaatttgggtggactaatttagcctctt 892  Q
    |||||||||||||||||||||| |||||||||||||| ||||    
T  40286860 attctctccaatgttaatttggatggactaatttagcttctt 40286819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 54437719 - 54437651
Alignment:
Q  13 gagatgaacattacatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataatt 81  Q
    ||||||||  ||||||||| ||| ||||| |||||||||||| ||||| || ||||||||||| |||||    
T  54437719 gagatgaagtttacatgttaaatgaaggatatgaagaagtttaatgttattgagatgaaaatggtaatt 54437651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 95
Target Start/End: Complemental strand, 54437860 - 54437806
Alignment:
Q  41 agatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaagaaaaa 95  Q
    |||||||||||||||||||| || |||| |||||| ||| |||| ||||||||||    
T  54437860 agatgaagaagtttgatgtttttgagattaaaatggtaactgattgtaagaaaaa 54437806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 847 - 892
Target Start/End: Original strand, 7973625 - 7973670
Alignment:
Q  847 ttcgattctctccaatgttaatttgggtggactaatttagcctctt 892  Q
    ||||||||||||  |||| |||||||||||||||||||||| ||||    
T  7973625 ttcgattctctctgatgtcaatttgggtggactaatttagcttctt 7973670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 847 - 892
Target Start/End: Complemental strand, 10499116 - 10499071
Alignment:
Q  847 ttcgattctctccaatgttaatttgggtggactaatttagcctctt 892  Q
    ||||||||||||| |||| ||||||||||| |||||||||| ||||    
T  10499116 ttcgattctctccgatgtcaatttgggtgggctaatttagcttctt 10499071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 48646479 - 48646423
Alignment:
Q  27 atgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgat 84  Q
    ||||||||| ||| | ||||| ||||||||||||||||||||||||||| | ||||||    
T  48646479 atgttgaatgaagaatatgaa-aagtttgatgttcttaagatgaaaatggtcattgat 48646423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 4e-19; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 10775244 - 10775163
Alignment:
Q  14 agatgaacattacatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaagaaaaa 95  Q
    ||||||| |||| ||||||||  || |||||||||||||||||||||||||||||||||||| ||||||||  |||||||||    
T  10775244 agatgaaaattagatgttgaacgaaagagatgaagaagtttgatgttcttaagatgaaaatggtaattgattctaagaaaaa 10775163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 46081044 - 46080971
Alignment:
Q  22 attacatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaagaaaaa 95  Q
    |||||||||||| | |||||||||||||||||| |||||||| ||||||||||| |||||||| ||||||||||    
T  46081044 attacatgttgagtgaaggagatgaagaagtttaatgttcttgagatgaaaatggtaattgattgtaagaaaaa 46080971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 142
Target Start/End: Original strand, 7997194 - 7997314
Alignment:
Q  25 acatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaagaaaaa---ctatcgatgagcatacatttttcctt 121  Q
    ||||||||||| || || ||||||||||| ||| || |  ||||||||||| ||||||||| |||||||||    |||||||||   ||||||||| |||    
T  7997194 acatgttgaatgaaagaaatgaagaagttagatattatagagatgaaaatggtaattgatactaagaaaaaatcatatcgatgaatctacattttttctt 7997293  T
Q  122 gatgaattgggggtaatttac 142  Q
    |||||||| ||||||||||||    
T  7997294 gatgaatttggggtaatttac 7997314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 34601446 - 34601516
Alignment:
Q  25 acatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaagaaaaa 95  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||| |  |||||||| ||| ||||||    
T  34601446 acatgttgaataaaggagatgaggaagtttgatgttcttaagataaaagttgtaattgattgtaggaaaaa 34601516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 44342055 - 44342145
Alignment:
Q  43 atgaagaagtttgatgttcttaagatgaaaatgataattgatagtaagaaaaac---tatcgatgagcatacatttttccttgatgaattggg 132  Q
    |||||||||||||||||| || | ||||||||| |||| ||||||||||||||    ||||| ||||| ||||||||||||||||||||||||    
T  44342055 atgaagaagtttgatgtt-ttgatatgaaaatggtaat-gatagtaagaaaaaactatatcggtgagcctacatttttccttgatgaattggg 44342145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 118 - 211
Target Start/End: Complemental strand, 3232271 - 3232179
Alignment:
Q  118 ccttgatgaattgggggtaatttacctctaatgacaagtacgattcgattttggaacgaaaagagatgtaaatcacatgttaaatgaagaagat 211  Q
    |||||||||||| |||| |||||||||||||||| ||||| ||||||||  | ||| | ||||||||| | || ||||||| ||||||||||||    
T  3232271 ccttgatgaattaggggcaatttacctctaatgataagtatgattcgatactagaa-gtaaagagatggagattacatgttgaatgaagaagat 3232179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 7104400 - 7104316
Alignment:
Q  126 aattgggggtaatttacctctaatgacaagtacgattcgattttggaacgaaaagagatgtaaatcacatgttaaatgaagaagat 211  Q
    |||||||||||| |||| |||||||||||||| ||||||||| || |||| ||||||||| | || ||||||| ||||||| ||||    
T  7104400 aattgggggtaaattacttctaatgacaagtatgattcgattctgaaacg-aaagagatgaatattacatgttgaatgaaggagat 7104316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 95
Target Start/End: Complemental strand, 42819674 - 42819621
Alignment:
Q  42 gatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaagaaaaa 95  Q
    |||||| |||||| |||||||| |||||||||||||||||||| ||||||||||    
T  42819674 gatgaataagttttatgttcttgagatgaaaatgataattgattgtaagaaaaa 42819621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 12145049 - 12144970
Alignment:
Q  13 gagatgaacattacatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaagaaaaa 95  Q
    |||||||| || ||||||||||| || |||||||||||||||||   | || |||| ||||||||||||||| ||||||||||    
T  12145049 gagatgaaaatcacatgttgaatgaatgagatgaagaagtttga---tattgagataaaaatgataattgattgtaagaaaaa 12144970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 52432728 - 52432672
Alignment:
Q  28 tgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgat 84  Q
    |||| ||| |||||||||||||||||| |||||||| ||||||||||| ||||||||    
T  52432728 tgttaaatgaaggagatgaagaagtttaatgttcttgagatgaaaatggtaattgat 52432672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 222
Target Start/End: Complemental strand, 49897998 - 49897909
Alignment:
Q  133 ggtaatttacctctaatgacaagtacgattcgattttggaacgaaaagagatgtaaatcacatgttaaatgaagaag-ataagaagttcga 222  Q
    |||||||||||||||||||||| || ||||||||| | |||| ||| |||||| | |||||||||| ||||||| || | |||||||||||    
T  49897998 ggtaatttacctctaatgacaattatgattcgattctagaac-aaaggagatggagatcacatgttgaatgaaggagaagaagaagttcga 49897909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 206
Target Start/End: Complemental strand, 68054 - 67982
Alignment:
Q  133 ggtaatttacctctaatgacaagtacgattcgattttggaacgaaaagagatgtaaatcacatgttaaatgaag 206  Q
    |||||||||||||||||||||| || ||| ||||||||||| | ||||||||| | |||||||||  |||||||    
T  68054 ggtaatttacctctaatgacaattatgatccgattttggaatg-aaagagatgaagatcacatgtagaatgaag 67982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 68198 - 68139
Alignment:
Q  160 attcgattttggaacgaaaagagatgtaaatcacatgttaaatgaagaagat-aagaagtt 219  Q
    |||||||||||||||||||| ||||| | |||||||||||||||||| |||| ||||||||    
T  68198 attcgattttggaacgaaaa-agatggagatcacatgttaaatgaaggagatgaagaagtt 68139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 92
Target Start/End: Complemental strand, 52432915 - 52432836
Alignment:
Q  13 gagatgaacattacatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaagaa 92  Q
    ||||| || ||||||||| |||| ||| | |||||||||||||||||| || ||| ||||||||||| | || |||||||    
T  52432915 gagataaaaattacatgtcgaatgaagaaaatgaagaagtttgatgtttttgagaagaaaatgataactaattgtaagaa 52432836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 68167 - 68097
Alignment:
Q  25 acatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaagaaaaa 95  Q
    ||||||| ||| ||||||||||||||||| ||||||||| | || |||||| ||| | || ||||||||||    
T  68167 acatgttaaatgaaggagatgaagaagttagatgttcttgaaataaaaatggtaactcattgtaagaaaaa 68097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 7104347 - 7104297
Alignment:
Q  13 gagatgaacattacatgttgaataaaggagatgaagaagtttgatgttctt 63  Q
    |||||||| |||||||||||||| |||||||||||||| ||| || |||||    
T  7104347 gagatgaatattacatgttgaatgaaggagatgaagaaatttaatattctt 7104297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 49897940 - 49897870
Alignment:
Q  25 acatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaagaaaaa 95  Q
    ||||||||||| ||||||| ||||||||| || |||||| || | |||||| ||||| || ||||||||||    
T  49897940 acatgttgaatgaaggagaagaagaagttcgacgttcttgagctaaaaatggtaattaatcgtaagaaaaa 49897870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 3232028 - 3231979
Alignment:
Q  25 acatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaat 74  Q
    ||||||||||| || || ||||||||||||| ||||||| ||||||||||    
T  3232028 acatgttgaatgaatgacatgaagaagtttgttgttcttgagatgaaaat 3231979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 38839666 - 38839715
Alignment:
Q  25 acatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaat 74  Q
    |||||| |||| ||| ||||||||| ||||||||||||| ||||||||||    
T  38839666 acatgtcgaatgaagaagatgaagaggtttgatgttcttgagatgaaaat 38839715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 3e-17; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 25 - 177
Target Start/End: Complemental strand, 20068155 - 20068000
Alignment:
Q  25 acatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaagaaaaa---ctatcgatgag-catacatttttcct 120  Q
    ||||||||||| || ||||||| |||||||||||||||  | ||||||||| || | ||| ||||||||||   |||| |||||| | |||||||| | |    
T  20068155 acatgttgaatgaaagagatgaggaagtttgatgttctctacatgaaaatggtact-gattgtaagaaaaagcactatggatgaggcttacattttcctt 20068057  T
Q  121 tgatgaattgggggtaatttacctctaatgacaagtacgattcgattttggaacgaa 177  Q
    ||||||||||  |||||||||||  ||| |||||||| ||||||||| |||||||||    
T  20068056 tgatgaattgaaggtaatttacccttaaagacaagtaggattcgattatggaacgaa 20068000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 32342669 - 32342600
Alignment:
Q  26 catgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaagaaaaa 95  Q
    |||||||||| || |||||||| |||||||||||| || |||||||||||||||||||| ||||||||||    
T  32342669 catgttgaatgaatgagatgaaaaagtttgatgtttttgagatgaaaatgataattgattgtaagaaaaa 32342600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 23577219 - 23577118
Alignment:
Q  27 atgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaagaaaaac--tatcgatgagcatacatttttccttgat 124  Q
    ||||||||| ||||||||| |||||| ||||||| || ||||||||||| ||| || || ||||||||||  ||||  ||||| ||||||||||||| ||    
T  23577219 atgttgaatgaaggagatggagaagtatgatgtttttgagatgaaaatggtaactgttactaagaaaaaccatatcattgagcctacatttttccttcat 23577120  T
Q  125 ga 126  Q
    ||    
T  23577119 ga 23577118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 32047242 - 32047194
Alignment:
Q  27 atgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatg 75  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||||    
T  32047242 atgttgaatgaatgagatgaagaagtttgatgttcttgagatgaaaatg 32047194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 20206481 - 20206527
Alignment:
Q  46 aagaagtttgatgttcttaagatgaaaatgataattgatagtaagaa 92  Q
    ||||||||||||||| || |||||||||||||||||||| |||||||    
T  20206481 aagaagtttgatgttattgagatgaaaatgataattgattgtaagaa 20206527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 22100504 - 22100550
Alignment:
Q  46 aagaagtttgatgttcttaagatgaaaatgataattgatagtaagaa 92  Q
    ||||||||||||||| || |||||||||||||||||||| |||||||    
T  22100504 aagaagtttgatgttattgagatgaaaatgataattgattgtaagaa 22100550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 32047317 - 32047262
Alignment:
Q  118 ccttgatgaattgggggtaatttacctctaatgacaagtacgattcgattttggaa 173  Q
    ||||||||||||| || ||||||||||||||||| ||||| ||||| ||| |||||    
T  32047317 ccttgatgaattgaggataatttacctctaatgataagtaggattcaattatggaa 32047262  T

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Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 202
Target Start/End: Complemental strand, 23577121 - 23577068
Alignment:
Q  148 atgacaagtacgattcgattttggaacgaaaagagatgtaaatcacatgttaaat 202  Q
    ||||||| ||||||||||||||||||  ||||||||||||||| |||| ||||||    
T  23577121 atgacaaatacgattcgattttggaa-taaaagagatgtaaataacatcttaaat 23577068  T

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Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 167
Target Start/End: Original strand, 26236751 - 26236797
Alignment:
Q  121 tgatgaattgggggtaatttacctctaatgacaagtacgattcgatt 167  Q
    |||| |||||||||||||||||||||||| | ||||| |||||||||    
T  26236751 tgataaattgggggtaatttacctctaataataagtatgattcgatt 26236797  T

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Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 847 - 892
Target Start/End: Original strand, 12633078 - 12633123
Alignment:
Q  847 ttcgattctctccaatgttaatttgggtggactaatttagcctctt 892  Q
    |||||||||||||||||| |||||  ||||||||||||||| ||||    
T  12633078 ttcgattctctccaatgtcaatttaagtggactaatttagcttctt 12633123  T

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Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 94
Target Start/End: Complemental strand, 23577070 - 23577009
Alignment:
Q  33 aataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgatagtaagaaaa 94  Q
    |||||| ||||| ||||| ||| ||||| |||| |||||||||||||||||| |||| ||||    
T  23577070 aataaaagagataaagaaattttatgtttttaaaatgaaaatgataattgattgtaaaaaaa 23577009  T

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Target: scaffold0136 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 36965 - 37033
Alignment:
Q  12 tgagatgaacattacatgttgaataaaggagatgaagaagtttgatgt-tcttaagatgaaaatgataa 79  Q
    ||||||||| || |||||||||||||| ||||||||||| |||||||| | ||||||||||||||||||    
T  36965 tgagatgaagatcacatgttgaataaacgagatgaagaaatttgatgtgttttaagatgaaaatgataa 37033  T

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Target: scaffold1743 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold1743
Description:

Target: scaffold1743; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 853 - 794
Alignment:
Q  25 acatgttgaataaaggagatgaagaagtttgatgttcttaagatgaaaatgataattgat 84  Q
    ||||||||||| ||||||||||||||||||||| | ||| | | ||||||||||| ||||    
T  853 acatgttgaatcaaggagatgaagaagtttgatatacttgaaaggaaaatgataaatgat 794  T

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Target: scaffold0047 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 62744 - 62791
Alignment:
Q  37 aaggagatgaagaagtttgatgttcttaagatgaaaatgataattgat 84  Q
    |||||||| ||||||||||||||| ||||||||||| |||||| ||||    
T  62744 aaggagataaagaagtttgatgtttttaagatgaaattgataactgat 62791  T

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