View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15522_low_4 (Length: 659)

Name: NF15522_low_4
Description: NF15522
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15522_low_4
NF15522_low_4
[»] chr8 (46 HSPs)
chr8 (549-631)||(43456658-43456741)
chr8 (549-628)||(1360143-1360223)
chr8 (536-623)||(41454841-41454929)
chr8 (550-626)||(280008-280084)
chr8 (550-626)||(635768-635844)
chr8 (550-626)||(821571-821647)
chr8 (549-631)||(1032576-1032660)
chr8 (549-622)||(19957336-19957410)
chr8 (549-622)||(43508463-43508537)
chr8 (590-628)||(2696581-2696619)
chr8 (590-628)||(2800067-2800105)
chr8 (557-622)||(10201276-10201342)
chr8 (590-628)||(31129350-31129388)
chr8 (552-628)||(3311449-3311526)
chr8 (552-631)||(4259868-4259949)
chr8 (585-622)||(17467320-17467357)
chr8 (537-617)||(31712547-31712627)
chr8 (590-622)||(4798556-4798588)
chr8 (590-622)||(14010787-14010819)
chr8 (590-622)||(15042380-15042412)
chr8 (590-622)||(17855697-17855729)
chr8 (549-631)||(19733074-19733158)
chr8 (549-628)||(22652689-22652769)
chr8 (536-623)||(30466672-30466760)
chr8 (590-622)||(33524444-33524476)
chr8 (549-631)||(38289240-38289324)
chr8 (549-623)||(5904388-5904463)
chr8 (593-628)||(7314784-7314819)
chr8 (590-628)||(171275-171313)
chr8 (590-628)||(1588815-1588853)
chr8 (552-632)||(36103926-36104008)
chr8 (594-628)||(45536770-45536804)
chr8 (537-617)||(7453350-7453430)
chr8 (590-623)||(13537325-13537358)
chr8 (590-623)||(13626873-13626906)
chr8 (585-622)||(14683919-14683956)
chr8 (590-619)||(17980330-17980359)
chr8 (593-622)||(34073254-34073283)
chr8 (591-628)||(38790581-38790618)
chr8 (590-622)||(8034578-8034610)
chr8 (552-623)||(8350445-8350517)
chr8 (590-622)||(11823010-11823042)
chr8 (590-622)||(23239172-23239204)
chr8 (585-617)||(25890396-25890428)
chr8 (590-622)||(33570444-33570476)
chr8 (590-622)||(43468720-43468752)
[»] scaffold0001 (1 HSPs)
scaffold0001 (536-631)||(419705-419802)
[»] chr7 (52 HSPs)
chr7 (536-631)||(40273814-40273911)
chr7 (535-631)||(48433715-48433813)
chr7 (536-631)||(24029978-24030075)
chr7 (549-631)||(31793474-31793558)
chr7 (536-626)||(38378212-38378303)
chr7 (549-628)||(3889809-3889890)
chr7 (549-628)||(28914886-28914967)
chr7 (536-631)||(33248807-33248904)
chr7 (549-631)||(12166088-12166172)
chr7 (536-622)||(14707286-14707372)
chr7 (590-628)||(3961417-3961455)
chr7 (549-618)||(3902293-3902362)
chr7 (556-631)||(4956097-4956174)
chr7 (537-617)||(9497964-9498044)
chr7 (590-623)||(33202568-33202601)
chr7 (590-622)||(11808086-11808118)
chr7 (590-622)||(21285368-21285400)
chr7 (590-622)||(29658287-29658319)
chr7 (590-622)||(43635636-43635668)
chr7 (591-622)||(10958082-10958113)
chr7 (593-628)||(19126788-19126823)
chr7 (552-626)||(36528230-36528305)
chr7 (536-622)||(46243284-46243371)
chr7 (536-621)||(37665737-37665823)
chr7 (590-628)||(41417284-41417322)
chr7 (549-618)||(42338266-42338336)
chr7 (590-628)||(42841790-42841828)
chr7 (535-616)||(44662484-44662566)
chr7 (590-628)||(47355857-47355895)
chr7 (585-622)||(4169119-4169156)
chr7 (537-617)||(9877259-9877339)
chr7 (537-617)||(10244881-10244961)
chr7 (537-609)||(21066884-21066956)
chr7 (537-617)||(23102550-23102630)
chr7 (539-631)||(24315359-24315452)
chr7 (590-627)||(25711141-25711178)
chr7 (591-628)||(31475849-31475886)
chr7 (593-622)||(34948157-34948186)
chr7 (590-619)||(44437843-44437872)
chr7 (585-622)||(47552256-47552293)
chr7 (537-617)||(5990138-5990217)
chr7 (590-618)||(7465514-7465542)
chr7 (590-622)||(8725153-8725185)
chr7 (590-622)||(14102509-14102541)
chr7 (590-622)||(14412526-14412558)
chr7 (590-622)||(23685569-23685601)
chr7 (590-622)||(28693853-28693885)
chr7 (590-622)||(30152789-30152821)
chr7 (590-622)||(36315989-36316021)
chr7 (590-622)||(38451911-38451943)
chr7 (590-622)||(47880194-47880226)
chr7 (543-622)||(48525577-48525657)
[»] chr6 (38 HSPs)
chr6 (536-631)||(6228265-6228362)
chr6 (549-631)||(17216964-17217048)
chr6 (536-631)||(4854311-4854408)
chr6 (537-631)||(20415567-20415663)
chr6 (549-631)||(19748105-19748188)
chr6 (535-631)||(18903372-18903470)
chr6 (555-622)||(35065505-35065572)
chr6 (590-628)||(29284166-29284204)
chr6 (590-623)||(3448400-3448433)
chr6 (583-628)||(6144005-6144050)
chr6 (590-623)||(22983628-22983661)
chr6 (590-623)||(23804747-23804780)
chr6 (591-628)||(33628950-33628987)
chr6 (590-622)||(9491750-9491782)
chr6 (184-231)||(4912372-4912419)
chr6 (590-621)||(6658559-6658590)
chr6 (590-621)||(19680264-19680295)
chr6 (536-622)||(20568272-20568358)
chr6 (552-626)||(30422119-30422194)
chr6 (590-621)||(30833065-30833096)
chr6 (552-622)||(5641705-5641775)
chr6 (590-628)||(14981711-14981749)
chr6 (592-622)||(25020543-25020573)
chr6 (593-622)||(17751352-17751381)
chr6 (537-617)||(29284264-29284344)
chr6 (552-623)||(1128433-1128505)
chr6 (538-617)||(2251837-2251916)
chr6 (590-622)||(3294815-3294847)
chr6 (594-622)||(7720518-7720546)
chr6 (590-622)||(10377139-10377171)
chr6 (549-631)||(11552877-11552961)
chr6 (591-623)||(11611418-11611450)
chr6 (594-622)||(12089149-12089177)
chr6 (591-623)||(18618553-18618585)
chr6 (590-622)||(19642562-19642594)
chr6 (583-622)||(26669674-26669714)
chr6 (553-620)||(29321993-29322061)
chr6 (592-628)||(34675815-34675851)
[»] chr5 (36 HSPs)
chr5 (536-631)||(38503262-38503359)
chr5 (549-631)||(31250153-31250237)
chr5 (549-631)||(43227872-43227956)
chr5 (549-628)||(17077367-17077447)
chr5 (590-628)||(1463919-1463957)
chr5 (590-628)||(4674824-4674862)
chr5 (590-628)||(10943764-10943802)
chr5 (590-628)||(36045143-36045181)
chr5 (537-617)||(12891555-12891635)
chr5 (590-623)||(15106901-15106934)
chr5 (585-622)||(38618696-38618733)
chr5 (590-622)||(843383-843415)
chr5 (590-622)||(3535951-3535983)
chr5 (590-622)||(8015883-8015915)
chr5 (591-623)||(22397002-22397034)
chr5 (590-622)||(28537183-28537215)
chr5 (552-622)||(34729481-34729551)
chr5 (590-628)||(6447489-6447527)
chr5 (590-628)||(20735184-20735222)
chr5 (590-628)||(37303982-37304020)
chr5 (591-628)||(1572159-1572196)
chr5 (590-623)||(6614052-6614085)
chr5 (594-623)||(10106682-10106711)
chr5 (591-628)||(18303087-18303124)
chr5 (590-631)||(18872569-18872610)
chr5 (585-622)||(29096323-29096360)
chr5 (593-622)||(35168647-35168676)
chr5 (590-623)||(42801455-42801488)
chr5 (537-617)||(42916387-42916467)
chr5 (585-617)||(8241096-8241128)
chr5 (590-622)||(18478051-18478083)
chr5 (590-622)||(19059019-19059051)
chr5 (590-622)||(20191489-20191521)
chr5 (594-622)||(31556870-31556898)
chr5 (590-622)||(32158429-32158461)
chr5 (590-622)||(33800941-33800973)
[»] chr1 (71 HSPs)
chr1 (549-631)||(24134629-24134713)
chr1 (532-623)||(34702327-34702419)
chr1 (549-622)||(19424052-19424126)
chr1 (549-628)||(7438627-7438707)
chr1 (552-631)||(14262726-14262807)
chr1 (590-627)||(15368853-15368890)
chr1 (535-623)||(49619964-49620053)
chr1 (536-631)||(50011500-50011597)
chr1 (536-623)||(15417831-15417919)
chr1 (549-631)||(43109243-43109327)
chr1 (549-631)||(2017690-2017773)
chr1 (549-631)||(47651878-47651961)
chr1 (590-628)||(17350109-17350147)
chr1 (590-628)||(29491518-29491556)
chr1 (535-631)||(40061435-40061533)
chr1 (552-631)||(4684182-4684263)
chr1 (552-631)||(10123058-10123138)
chr1 (536-631)||(12973283-12973380)
chr1 (549-618)||(34940436-34940505)
chr1 (590-622)||(9768824-9768856)
chr1 (590-622)||(11405504-11405536)
chr1 (590-622)||(15774327-15774359)
chr1 (553-631)||(25031502-25031582)
chr1 (553-628)||(25800342-25800418)
chr1 (590-622)||(33844665-33844697)
chr1 (590-622)||(33949281-33949313)
chr1 (590-622)||(37733803-37733835)
chr1 (590-622)||(50199491-50199523)
chr1 (591-622)||(9769595-9769626)
chr1 (591-622)||(12553243-12553274)
chr1 (591-622)||(32635189-32635220)
chr1 (585-628)||(35111692-35111735)
chr1 (593-628)||(39238767-39238802)
chr1 (583-617)||(3311551-3311585)
chr1 (590-631)||(3347708-3347750)
chr1 (590-628)||(19976561-19976599)
chr1 (590-628)||(25819233-25819271)
chr1 (552-622)||(29332295-29332364)
chr1 (591-625)||(32585397-32585431)
chr1 (594-628)||(38021304-38021338)
chr1 (590-628)||(40678871-40678909)
chr1 (543-631)||(48497218-48497308)
chr1 (590-619)||(2052700-2052729)
chr1 (536-631)||(4126892-4126989)
chr1 (590-623)||(11238042-11238075)
chr1 (583-623)||(16182849-16182890)
chr1 (537-617)||(21265654-21265734)
chr1 (590-627)||(23463996-23464033)
chr1 (585-622)||(32711159-32711196)
chr1 (537-617)||(33207203-33207283)
chr1 (590-623)||(37203236-37203269)
chr1 (585-622)||(41833550-41833587)
chr1 (537-617)||(42490402-42490482)
chr1 (562-622)||(42946482-42946543)
chr1 (590-622)||(2903042-2903074)
chr1 (590-622)||(3341751-3341783)
chr1 (590-622)||(9976399-9976431)
chr1 (537-573)||(16985991-16986027)
chr1 (587-623)||(17871095-17871131)
chr1 (538-601)||(17916702-17916766)
chr1 (594-622)||(23368747-23368775)
chr1 (590-622)||(24168594-24168626)
chr1 (590-622)||(27745205-27745237)
chr1 (590-622)||(41182822-41182854)
chr1 (590-622)||(41677108-41677140)
chr1 (585-617)||(44732679-44732711)
chr1 (594-622)||(48260204-48260232)
chr1 (596-631)||(49239852-49239888)
chr1 (590-622)||(49251410-49251442)
chr1 (585-617)||(51942340-51942372)
chr1 (590-622)||(52961097-52961129)
[»] chr4 (69 HSPs)
chr4 (549-631)||(40406965-40407050)
chr4 (549-621)||(38690672-38690745)
chr4 (549-631)||(16556457-16556541)
chr4 (549-631)||(43362173-43362257)
chr4 (549-631)||(48404142-48404226)
chr4 (549-631)||(23448979-23449062)
chr4 (534-631)||(46283113-46283212)
chr4 (536-628)||(27862840-27862933)
chr4 (553-621)||(34974712-34974780)
chr4 (552-631)||(45847931-45848012)
chr4 (590-628)||(7768797-7768835)
chr4 (590-628)||(8690262-8690300)
chr4 (590-628)||(9693010-9693048)
chr4 (590-628)||(14149841-14149879)
chr4 (553-626)||(22096402-22096476)
chr4 (590-628)||(28520740-28520778)
chr4 (590-628)||(36257742-36257780)
chr4 (585-623)||(37274623-37274661)
chr4 (590-628)||(48968219-48968257)
chr4 (552-631)||(45355723-45355803)
chr4 (552-631)||(45369464-45369544)
chr4 (549-631)||(11491224-11491308)
chr4 (583-622)||(29785190-29785230)
chr4 (590-622)||(47017961-47017993)
chr4 (590-625)||(13211364-13211399)
chr4 (556-622)||(24570223-24570290)
chr4 (550-628)||(41271987-41272066)
chr4 (591-622)||(49039460-49039491)
chr4 (591-622)||(53815745-53815776)
chr4 (592-622)||(28221322-28221352)
chr4 (590-631)||(29430545-29430587)
chr4 (593-627)||(34773693-34773727)
chr4 (590-628)||(36954185-36954223)
chr4 (590-631)||(37889611-37889653)
chr4 (590-628)||(40150521-40150559)
chr4 (590-620)||(42411471-42411501)
chr4 (585-623)||(45141247-45141285)
chr4 (590-628)||(50815755-50815793)
chr4 (590-628)||(52031255-52031293)
chr4 (590-628)||(52330918-52330956)
chr4 (590-620)||(53354983-53355013)
chr4 (590-620)||(53697997-53698027)
chr4 (537-617)||(8965092-8965172)
chr4 (590-623)||(10098173-10098206)
chr4 (590-631)||(21200578-21200619)
chr4 (590-623)||(24234088-24234121)
chr4 (583-623)||(29269329-29269370)
chr4 (591-628)||(30616049-30616086)
chr4 (593-622)||(36576315-36576344)
chr4 (585-618)||(42395599-42395632)
chr4 (585-622)||(42758179-42758216)
chr4 (536-620)||(51974740-51974825)
chr4 (590-623)||(55485840-55485873)
chr4 (590-622)||(3442891-3442923)
chr4 (594-622)||(3465635-3465663)
chr4 (591-623)||(6637736-6637768)
chr4 (590-622)||(9924904-9924936)
chr4 (594-622)||(10757790-10757818)
chr4 (594-622)||(10970961-10970989)
chr4 (594-622)||(12856236-12856264)
chr4 (590-622)||(13264261-13264293)
chr4 (590-622)||(20753140-20753172)
chr4 (590-622)||(33076578-33076610)
chr4 (590-622)||(36008323-36008355)
chr4 (590-622)||(37032194-37032226)
chr4 (594-622)||(45350328-45350356)
chr4 (594-622)||(45359807-45359835)
chr4 (590-622)||(49319441-49319473)
chr4 (536-572)||(49635425-49635461)
[»] chr3 (58 HSPs)
chr3 (552-631)||(50381723-50381804)
chr3 (549-631)||(47864642-47864726)
chr3 (536-622)||(166781-166868)
chr3 (536-631)||(11483606-11483703)
chr3 (552-631)||(27471513-27471594)
chr3 (535-623)||(32421340-32421429)
chr3 (536-631)||(33528210-33528307)
chr3 (590-628)||(3955356-3955394)
chr3 (590-628)||(9625031-9625069)
chr3 (590-628)||(10959181-10959219)
chr3 (590-628)||(24559437-24559475)
chr3 (590-628)||(27183690-27183728)
chr3 (590-631)||(29645832-29645874)
chr3 (590-628)||(36331735-36331773)
chr3 (550-623)||(45583476-45583550)
chr3 (590-627)||(49146132-49146169)
chr3 (537-617)||(53163592-53163672)
chr3 (585-622)||(53467991-53468028)
chr3 (590-622)||(24537875-24537907)
chr3 (549-631)||(29226332-29226416)
chr3 (549-631)||(39739280-39739364)
chr3 (535-622)||(45431619-45431707)
chr3 (590-622)||(46328939-46328971)
chr3 (591-622)||(2732712-2732743)
chr3 (591-622)||(33206806-33206837)
chr3 (539-617)||(39719935-39720013)
chr3 (590-628)||(3784118-3784156)
chr3 (585-615)||(4236974-4237004)
chr3 (590-628)||(14868733-14868771)
chr3 (592-622)||(27066660-27066690)
chr3 (549-622)||(37756428-37756502)
chr3 (552-629)||(38869199-38869277)
chr3 (537-610)||(45871015-45871088)
chr3 (535-631)||(46798574-46798672)
chr3 (592-622)||(49429510-49429540)
chr3 (590-628)||(52030169-52030207)
chr3 (591-620)||(13539981-13540010)
chr3 (590-619)||(24751278-24751307)
chr3 (590-623)||(36727477-36727510)
chr3 (586-623)||(45647350-45647387)
chr3 (590-627)||(48347282-48347319)
chr3 (590-622)||(11668284-11668316)
chr3 (594-622)||(14417920-14417948)
chr3 (590-622)||(16006521-16006553)
chr3 (590-622)||(24130607-24130639)
chr3 (596-628)||(24136761-24136793)
chr3 (590-622)||(24160543-24160575)
chr3 (539-622)||(31419579-31419663)
chr3 (590-622)||(31902220-31902252)
chr3 (590-622)||(32080103-32080135)
chr3 (590-622)||(32508809-32508841)
chr3 (591-623)||(34407104-34407136)
chr3 (590-622)||(35483317-35483349)
chr3 (590-622)||(43774233-43774265)
chr3 (590-622)||(49639076-49639108)
chr3 (590-622)||(50144621-50144653)
chr3 (543-622)||(50676882-50676962)
chr3 (590-622)||(54983720-54983752)
[»] chr2 (43 HSPs)
chr2 (535-616)||(24202142-24202224)
chr2 (557-631)||(42678329-42678405)
chr2 (590-628)||(29035024-29035062)
chr2 (590-628)||(34034398-34034436)
chr2 (537-617)||(4878207-4878287)
chr2 (590-623)||(9796945-9796978)
chr2 (590-627)||(36665478-36665515)
chr2 (590-622)||(580798-580830)
chr2 (590-622)||(3037637-3037669)
chr2 (590-622)||(8234807-8234839)
chr2 (590-622)||(11133124-11133156)
chr2 (590-622)||(17154697-17154729)
chr2 (549-620)||(32084851-32084923)
chr2 (590-622)||(36520795-36520827)
chr2 (591-622)||(1244618-1244649)
chr2 (585-620)||(9802935-9802970)
chr2 (536-622)||(23405193-23405279)
chr2 (590-620)||(2304338-2304368)
chr2 (594-631)||(3330206-3330244)
chr2 (590-624)||(33116220-33116254)
chr2 (549-626)||(40203290-40203368)
chr2 (590-628)||(43871001-43871039)
chr2 (590-628)||(44187752-44187790)
chr2 (555-623)||(17543104-17543173)
chr2 (590-623)||(20122489-20122522)
chr2 (553-622)||(22437228-22437297)
chr2 (537-617)||(33228925-33229005)
chr2 (585-622)||(33613620-33613657)
chr2 (594-627)||(44422159-44422192)
chr2 (590-622)||(1836636-1836668)
chr2 (594-622)||(4157664-4157692)
chr2 (585-617)||(5613000-5613032)
chr2 (590-622)||(10262787-10262819)
chr2 (590-622)||(11837037-11837069)
chr2 (583-622)||(18386827-18386867)
chr2 (590-622)||(19905670-19905702)
chr2 (590-622)||(25406665-25406697)
chr2 (590-622)||(32288424-32288456)
chr2 (595-623)||(32891334-32891362)
chr2 (549-631)||(33065262-33065346)
chr2 (590-622)||(37912477-37912509)
chr2 (585-617)||(41246432-41246464)
chr2 (590-622)||(41699150-41699182)
[»] scaffold0809 (1 HSPs)
scaffold0809 (585-628)||(4815-4858)
[»] scaffold0054 (1 HSPs)
scaffold0054 (549-626)||(22465-22543)
[»] scaffold0036 (1 HSPs)
scaffold0036 (591-624)||(25075-25108)
[»] scaffold0334 (1 HSPs)
scaffold0334 (585-623)||(5346-5384)
[»] scaffold0308 (1 HSPs)
scaffold0308 (590-628)||(7124-7162)
[»] scaffold0178 (1 HSPs)
scaffold0178 (590-627)||(4371-4408)
[»] scaffold0126 (1 HSPs)
scaffold0126 (585-622)||(22865-22902)
[»] scaffold0088 (1 HSPs)
scaffold0088 (537-617)||(10818-10898)
[»] scaffold0010 (1 HSPs)
scaffold0010 (590-619)||(236347-236376)
[»] scaffold0002 (1 HSPs)
scaffold0002 (590-623)||(451389-451422)
[»] scaffold0219 (1 HSPs)
scaffold0219 (590-622)||(6648-6680)
[»] scaffold0119 (1 HSPs)
scaffold0119 (583-622)||(1079-1119)
[»] scaffold0044 (1 HSPs)
scaffold0044 (590-622)||(49868-49900)


Alignment Details
Target: chr8 (Bit Score: 56; Significance: 7e-23; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 549 - 631
Target Start/End: Complemental strand, 43456741 - 43456658
Alignment:
Q  549 tagctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttattcattttaaggt 631  Q
    |||||||||||||||||||||||| | || ||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  43456741 tagctcatttggtaagggataatgcacaatatatgtaagggtcggggttcgaaccccggacaccccacttattcattttaaggt 43456658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 549 - 628
Target Start/End: Complemental strand, 1360223 - 1360143
Alignment:
Q  549 tagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattcattttaa 628  Q
    |||||||||||| || |||||||| | || ||  |||||||| ||||||||||||||||||||||||||||||||||||||    
T  1360223 tagctcatttggcaaaggataatgcacaatatgtgtaggggctggggttcgaaccccggacaccccacttattcattttaa 1360143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 536 - 623
Target Start/End: Complemental strand, 41454929 - 41454841
Alignment:
Q  536 gtccccgtgagtctagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattcat 623  Q
    |||||| ||||  |||||||||||||||||||||||| | || ||  | |||||| |||||||||||||||||||||||||||||||||    
T  41454929 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcat 41454841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 550 - 626
Target Start/End: Complemental strand, 280084 - 280008
Alignment:
Q  550 agctcatttggtaagggataatgtataagatacgtaggggcggggttcgaaccccggacaccccacttattcatttt 626  Q
    ||||||||||||||||||||||||| || ||  | |||||  ||||||||||||||||||||| | |||||||||||    
T  280084 agctcatttggtaagggataatgtacaatatgtgcaggggtagggttcgaaccccggacacccaatttattcatttt 280008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 550 - 626
Target Start/End: Original strand, 635768 - 635844
Alignment:
Q  550 agctcatttggtaagggataatgtataagatacgtaggggcggggttcgaaccccggacaccccacttattcatttt 626  Q
    ||||||||||||||||||||||||| || ||  | |||||  ||||||||||||||||||||| | |||||||||||    
T  635768 agctcatttggtaagggataatgtacaatatgtgcaggggtagggttcgaaccccggacacccaatttattcatttt 635844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 550 - 626
Target Start/End: Original strand, 821571 - 821647
Alignment:
Q  550 agctcatttggtaagggataatgtataagatacgtaggggcggggttcgaaccccggacaccccacttattcatttt 626  Q
    ||||||||||||||||||||||||| || ||  | |||||  ||||||||||||||||||||| | |||||||||||    
T  821571 agctcatttggtaagggataatgtacaatatgtgcaggggtagggttcgaaccccggacacccaatttattcatttt 821647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 549 - 631
Target Start/End: Original strand, 1032576 - 1032660
Alignment:
Q  549 tagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    |||||||||||||||||||||||| | || ||  | |||||| |||||||||||||| |||||||||||||||||| ||||||||    
T  1032576 tagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccagacaccccacttattcatctttaaggt 1032660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 549 - 622
Target Start/End: Complemental strand, 19957410 - 19957336
Alignment:
Q  549 tagctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttattca 622  Q
    ||||||| |||||||||||||||| |||  ||| | ||||| || ||||||||||||||||||||||||||||||    
T  19957410 tagctcacttggtaagggataatgcatattatatgcaggggacgaggttcgaaccccggacaccccacttattca 19957336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 549 - 622
Target Start/End: Complemental strand, 43508537 - 43508463
Alignment:
Q  549 tagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattca 622  Q
    ||||||| ||| ||||||| |||| |||| ||| |||||||| |||||| |||||||||||||||||||||||||    
T  43508537 tagctcagttgataagggacaatgcataatatatgtaggggccggggtttgaaccccggacaccccacttattca 43508463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 590 - 628
Target Start/End: Original strand, 2696581 - 2696619
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  2696581 cggggttcgaaccccggacaccccacttattcactttaa 2696619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 590 - 628
Target Start/End: Original strand, 2800067 - 2800105
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  2800067 cggggttcgaaccccggacaccccacttattcactttaa 2800105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 557 - 622
Target Start/End: Original strand, 10201276 - 10201342
Alignment:
Q  557 ttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||| ||||||| |||| ||| ||||||| |||||||||||||||||||||| || |||||||    
T  10201276 ttggtaagagataatgcataatatatgtaggggtcggggttcgaaccccggacacctcatttattca 10201342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 590 - 628
Target Start/End: Original strand, 31129350 - 31129388
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  31129350 cggggttcgaaccccggacaccccacttattcactttaa 31129388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 552 - 628
Target Start/End: Original strand, 3311449 - 3311526
Alignment:
Q  552 ctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||| ||||||||||||| ||  || | ||||  | |||||||||||||||||||||||||||||||| ||||    
T  3311449 ctcatttggcaagggataatgtacaatttatgcagggatcagggttcgaaccccggacaccccacttattcatcttaa 3311526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 552 - 631
Target Start/End: Original strand, 4259868 - 4259949
Alignment:
Q  552 ctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    ||||||||||||||||||||| | || ||  | |||||| ||||||| |||||||||| |||||||||||||| ||||||||    
T  4259868 ctcatttggtaagggataatgcacaatatgtgcaggggccggggttccaaccccggactccccacttattcatctttaaggt 4259949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 585 - 622
Target Start/End: Original strand, 17467320 - 17467357
Alignment:
Q  585 aggggcggggttcgaaccccggacaccccacttattca 622  Q
    |||||| |||||||||||||||||||||||||||||||    
T  17467320 aggggccgggttcgaaccccggacaccccacttattca 17467357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 537 - 617
Target Start/End: Original strand, 31712547 - 31712627
Alignment:
Q  537 tccccgtgagtctagctcatttggtaagggataatgtataagatacgtaggggcg-gggttcgaaccccggacaccccactt 617  Q
    ||||||||||| ||||||| |||| | |||||| ||||||  ||| ||||||||  ||||||||||||||||||||||||||    
T  31712547 tccccgtgagtttagctcacttggca-gggatattgtatattatatgtaggggccagggttcgaaccccggacaccccactt 31712627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 4798588 - 4798556
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||||||    
T  4798588 cggggttcgaaccccggacaccccacttattca 4798556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 14010819 - 14010787
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||||||    
T  14010819 cggggttcgaaccccggacaccccacttattca 14010787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 15042412 - 15042380
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||||||    
T  15042412 cggggttcgaaccccggacaccccacttattca 15042380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 590 - 622
Target Start/End: Original strand, 17855697 - 17855729
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||||||    
T  17855697 cggggttcgaaccccggacaccccacttattca 17855729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 549 - 631
Target Start/End: Complemental strand, 19733158 - 19733074
Alignment:
Q  549 tagctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    |||||||||||||||||||||||| |||| ||| | ||||| ||||||||||| |||| |||||  | |||||||| ||||||||    
T  19733158 tagctcatttggtaagggataatgcataatatatgcaggggtcggggttcgaatcccgaacacctaaattattcatctttaaggt 19733074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 549 - 628
Target Start/End: Original strand, 22652689 - 22652769
Alignment:
Q  549 tagctcatttggtaagggataatgtataagatacgtaggggcggg-gttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||||| |||||||||||| ||||  |  | |||||| || ||||||||||||||||||||| |||||||| ||||    
T  22652689 tagctcatttgataagggataatgcataatttgtgcaggggccggtgttcgaaccccggacaccccaattattcatgttaa 22652769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 536 - 623
Target Start/End: Original strand, 30466672 - 30466760
Alignment:
Q  536 gtccccgtgagtctagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattcat 623  Q
    |||||| ||||  |||||||||||||||||| ||||| | || ||  | |||||| |||||||||||| | ||||||||||||||||||    
T  30466672 gtccccatgagcttagctcatttggtaagggctaatgcacaatatgtgcaggggctggggttcgaacctcagacaccccacttattcat 30466760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 590 - 622
Target Start/End: Original strand, 33524444 - 33524476
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||||||    
T  33524444 cggggttcgaaccccggacaccccacttattca 33524476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 549 - 631
Target Start/End: Complemental strand, 38289324 - 38289240
Alignment:
Q  549 tagctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    |||||||||||||||||||||||| | || ||  | ||||| ||||||||||||| |  ||||||||||||||||| ||||||||    
T  38289324 tagctcatttggtaagggataatgcacaatatgtgcaggggtcggggttcgaacctcaaacaccccacttattcatctttaaggt 38289240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 549 - 623
Target Start/End: Complemental strand, 5904463 - 5904388
Alignment:
Q  549 tagctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttattcat 623  Q
    |||||||||||||||  ||||||| | || ||  | ||||| |||||||||||||||||||| |||||||||||||    
T  5904463 tagctcatttggtaaaagataatgcacaatatgtgcaggggacggggttcgaaccccggacatcccacttattcat 5904388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 593 - 628
Target Start/End: Original strand, 7314784 - 7314819
Alignment:
Q  593 ggttcgaaccccggacaccccacttattcattttaa 628  Q
    |||||||||||||||||||||||||||||| |||||    
T  7314784 ggttcgaaccccggacaccccacttattcactttaa 7314819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 628
Target Start/End: Original strand, 171275 - 171313
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  171275 cggggttcgaaccccagacaccccactcattcattttaa 171313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 628
Target Start/End: Original strand, 1588815 - 1588853
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||||||| ||||||||||||||||||| |||||    
T  1588815 cggggttcgaacctcggacaccccacttattcactttaa 1588853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 552 - 632
Target Start/End: Complemental strand, 36104008 - 36103926
Alignment:
Q  552 ctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattcat-tttaaggtc 632  Q
    |||||||||||| |||||||| | || ||  | |||||| ||||||||||||||  ||||||||||||||||| |||||||||    
T  36104008 ctcatttggtaaaggataatgcacaatatgtgcaggggccggggttcgaaccccaaacaccccacttattcatctttaaggtc 36103926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 594 - 628
Target Start/End: Original strand, 45536770 - 45536804
Alignment:
Q  594 gttcgaaccccggacaccccacttattcattttaa 628  Q
    |||||||||||||||||||||||||||||| ||||    
T  45536770 gttcgaaccccggacaccccacttattcatcttaa 45536804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 617
Target Start/End: Original strand, 7453350 - 7453430
Alignment:
Q  537 tccccgtgagtctagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccactt 617  Q
    ||||||||||| |||||||  ||||| |||||| || ||   ||| |||||||| |||||||||||||||||||||||||||    
T  7453350 tccccgtgagtttagctcagctggta-gggatattgcattttatatgtaggggccggggttcgaaccccggacaccccactt 7453430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 590 - 623
Target Start/End: Complemental strand, 13537358 - 13537325
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcat 623  Q
    ||||||||||||||| ||||||||||||||||||    
T  13537358 cggggttcgaaccccagacaccccacttattcat 13537325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 590 - 623
Target Start/End: Complemental strand, 13626906 - 13626873
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcat 623  Q
    ||||||||||||||| ||||||||||||||||||    
T  13626906 cggggttcgaaccccagacaccccacttattcat 13626873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 585 - 622
Target Start/End: Original strand, 14683919 - 14683956
Alignment:
Q  585 aggggcggggttcgaaccccggacaccccacttattca 622  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  14683919 agggtcggggttcgaaccccggacatcccacttattca 14683956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 590 - 619
Target Start/End: Original strand, 17980330 - 17980359
Alignment:
Q  590 cggggttcgaaccccggacaccccacttat 619  Q
    ||||||||||||||||||||||||||||||    
T  17980330 cggggttcgaaccccggacaccccacttat 17980359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 593 - 622
Target Start/End: Complemental strand, 34073283 - 34073254
Alignment:
Q  593 ggttcgaaccccggacaccccacttattca 622  Q
    ||||||||||||||||||||||||||||||    
T  34073283 ggttcgaaccccggacaccccacttattca 34073254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 591 - 628
Target Start/End: Complemental strand, 38790618 - 38790581
Alignment:
Q  591 ggggttcgaaccccggacaccccacttattcattttaa 628  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  38790618 ggggttcgaaccccagacaccccacttattcactttaa 38790581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Original strand, 8034578 - 8034610
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||| ||||||||||||||||    
T  8034578 cggggttcgaaccccgaacaccccacttattca 8034610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 552 - 623
Target Start/End: Original strand, 8350445 - 8350517
Alignment:
Q  552 ctcatttggtaagggataatgtataagatacgtaggggcggg-gttcgaaccccggacaccccacttattcat 623  Q
    ||||||||||||| ||||||  | || ||| | |||||| || ||||||||| ||||||||||||||||||||    
T  8350445 ctcatttggtaagtgataatacacaatatatgcaggggccggagttcgaacctcggacaccccacttattcat 8350517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Original strand, 11823010 - 11823042
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    ||||||| |||||||||||||||||||||||||    
T  11823010 cggggtttgaaccccggacaccccacttattca 11823042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Original strand, 23239172 - 23239204
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    ||||||| |||||||||||||||||||||||||    
T  23239172 cggggtttgaaccccggacaccccacttattca 23239204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 585 - 617
Target Start/End: Complemental strand, 25890428 - 25890396
Alignment:
Q  585 aggggcggggttcgaaccccggacaccccactt 617  Q
    |||| ||||||||||||||||||||||||||||    
T  25890428 agggccggggttcgaaccccggacaccccactt 25890396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 33570476 - 33570444
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    ||||||||||||| |||||||||||||||||||    
T  33570476 cggggttcgaacctcggacaccccacttattca 33570444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 43468752 - 43468720
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||| ||||||||||||||||||||    
T  43468752 cggggttcgaactccggacaccccacttattca 43468720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 536 - 631
Target Start/End: Original strand, 419705 - 419802
Alignment:
Q  536 gtccccgtgagtctagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    |||||| ||||  |||||||||||||||||||||||| | || ||  | |||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  419705 gtccccatgagcttagctcatttggtaagggataatgaacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggt 419802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 7e-17; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 536 - 631
Target Start/End: Original strand, 40273814 - 40273911
Alignment:
Q  536 gtccccgtgagtctagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    |||||| ||||  |||||||||||||||||||||||| | || ||  | |||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  40273814 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggt 40273911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 535 - 631
Target Start/End: Complemental strand, 48433813 - 48433715
Alignment:
Q  535 agtccccgtgagtctagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    ||||||| ||||  |||||||||||||||||||||||| | || ||  | |||||| ||||||| ||||||||||||||||||||||||| ||||||||    
T  48433813 agtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcaaaccccggacaccccacttattcatctttaaggt 48433715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 536 - 631
Target Start/End: Original strand, 24029978 - 24030075
Alignment:
Q  536 gtccccgtgagtctagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    |||||| ||||| ||||||||||| |||||||||||| | || ||  |||||||| |||||||||||||| ||||||||| |||||||| ||||||||    
T  24029978 gtccccatgagtttagctcatttgataagggataatgcacaatatgtgtaggggccggggttcgaaccccagacaccccatttattcatctttaaggt 24030075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 549 - 631
Target Start/End: Original strand, 31793474 - 31793558
Alignment:
Q  549 tagctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    ||||||||||| |||||||||||| | || ||  | ||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  31793474 tagctcatttgttaagggataatgcacaatatgtgcaggggtcggggttcgaaccccggacaccccacttattcatctttaaggt 31793558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 536 - 626
Target Start/End: Original strand, 38378212 - 38378303
Alignment:
Q  536 gtccccgtgagtctagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattcatttt 626  Q
    |||||| ||||| ||| | |||||||||||||||||| | || ||  | |||||| |||||| |||||||||||||||||||||||||||||    
T  38378212 gtccccatgagtttagtttatttggtaagggataatgcacaatatgtgcaggggccggggtttgaaccccggacaccccacttattcatttt 38378303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 549 - 628
Target Start/End: Complemental strand, 3889890 - 3889809
Alignment:
Q  549 tagctcatttggtaagggataatgtataagatacgtagggg--cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    |||||||||||  ||||||||||||| || ||| | |||||  | |||||||||||||||||||||||||||||||| ||||    
T  3889890 tagctcatttgacaagggataatgtacaatatatgcagggggccagggttcgaaccccggacaccccacttattcatcttaa 3889809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 549 - 628
Target Start/End: Complemental strand, 28914967 - 28914886
Alignment:
Q  549 tagctcatttggtaagggataatgtataagatacgtagggg--cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    |||||||  ||||||||||||||| |||  ||| | |||||  ||||||||||||||||||||||||||||||||| |||||    
T  28914967 tagctcacatggtaagggataatgcatattatatgcagggggccggggttcgaaccccggacaccccacttattcactttaa 28914886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 536 - 631
Target Start/End: Complemental strand, 33248904 - 33248807
Alignment:
Q  536 gtccccgtgagtctagctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    |||||| ||||  |||||||||||||||||||| ||| | || ||| | || || ||||||||||||||||||||||| |||||||||| ||||||||    
T  33248904 gtccccatgagcttagctcatttggtaagggatgatgcacaatatatgcagaggtcggggttcgaaccccggacaccctacttattcatctttaaggt 33248807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 549 - 631
Target Start/End: Original strand, 12166088 - 12166172
Alignment:
Q  549 tagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    |||||||||||||||||||||||| | ||  |  | |||||| |||||||||||||| |||||||||||||||||| ||||||||    
T  12166088 tagctcatttggtaagggataatgcacaatttgtgcaggggctggggttcgaaccccagacaccccacttattcatctttaaggt 12166172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 536 - 622
Target Start/End: Original strand, 14707286 - 14707372
Alignment:
Q  536 gtccccgtgagtctagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattca 622  Q
    |||||| ||||  |||||||||||||||||||||||| ||   ||| | |||||  ||||||||||||||||||||||||||||||||    
T  14707286 gtccccatgagcttagctcatttggtaagggataatgcattt-atatgcaggggttggggttcgaaccccggacaccccacttattca 14707372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 590 - 628
Target Start/End: Complemental strand, 3961455 - 3961417
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  3961455 cggggttcgaaccccggacatcccacttattcattttaa 3961417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 549 - 618
Target Start/End: Complemental strand, 3902362 - 3902293
Alignment:
Q  549 tagctcatttggtaagggataatgtataagatacgtaggggcggggttcgaaccccggacaccccactta 618  Q
    |||||||||||||||||||||||| | || ||  | |||| ||||||||||||||||  |||||||||||    
T  3902362 tagctcatttggtaagggataatgcaaaatatgtgcagggccggggttcgaaccccgatcaccccactta 3902293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 556 - 631
Target Start/End: Complemental strand, 4956174 - 4956097
Alignment:
Q  556 tttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    ||||||||||||||||| | || ||  | ||||| |||||||||||||| ||||||||||||||||||| ||||||||    
T  4956174 tttggtaagggataatgcacaatatgtgcaggggtcggggttcgaaccctggacaccccacttattcatctttaaggt 4956097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 537 - 617
Target Start/End: Original strand, 9497964 - 9498044
Alignment:
Q  537 tccccgtgagtctagctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccactt 617  Q
    |||||| |||| ||||||| |||||| |||||| || |||  ||| ||||||| ||||||||||||||||||||||||||||    
T  9497964 tccccgcgagtttagctcaattggta-gggatattgcatattatatgtaggggtcggggttcgaaccccggacaccccactt 9498044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 590 - 623
Target Start/End: Complemental strand, 33202601 - 33202568
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcat 623  Q
    ||||||||||||||||||||||||||||||||||    
T  33202601 cggggttcgaaccccggacaccccacttattcat 33202568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 590 - 622
Target Start/End: Original strand, 11808086 - 11808118
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||||||    
T  11808086 cggggttcgaaccccggacaccccacttattca 11808118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 21285400 - 21285368
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||||||    
T  21285400 cggggttcgaaccccggacaccccacttattca 21285368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 29658319 - 29658287
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||||||    
T  29658319 cggggttcgaaccccggacaccccacttattca 29658287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 590 - 622
Target Start/End: Original strand, 43635636 - 43635668
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||||||    
T  43635636 cggggttcgaaccccggacaccccacttattca 43635668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 591 - 622
Target Start/End: Original strand, 10958082 - 10958113
Alignment:
Q  591 ggggttcgaaccccggacaccccacttattca 622  Q
    ||||||||||||||||||||||||||||||||    
T  10958082 ggggttcgaaccccggacaccccacttattca 10958113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 593 - 628
Target Start/End: Original strand, 19126788 - 19126823
Alignment:
Q  593 ggttcgaaccccggacaccccacttattcattttaa 628  Q
    |||||||||||||||||||||||||||||| |||||    
T  19126788 ggttcgaaccccggacaccccacttattcactttaa 19126823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 552 - 626
Target Start/End: Complemental strand, 36528305 - 36528230
Alignment:
Q  552 ctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttattcatttt 626  Q
    ||||||||||||||||||||| | || ||   |||||| ||| |||||||||||||||| ||||| ||||||||||    
T  36528305 ctcatttggtaagggataatgcacaatatgtataggggtcggagttcgaaccccggacatcccacctattcatttt 36528230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 536 - 622
Target Start/End: Original strand, 46243284 - 46243371
Alignment:
Q  536 gtccccgtgagtctagctcatttggtaagggataatgtataagatacgtaggg-gcggggttcgaaccccggacaccccacttattca 622  Q
    ||||| |||||  |||||||||||||||||||||||| |||  |||  |||||  ||| |||||||| ||| ||||||||||||||||    
T  46243284 gtccctgtgagcttagctcatttggtaagggataatgcatattatatatagggatcggagttcgaactccgaacaccccacttattca 46243371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 536 - 621
Target Start/End: Original strand, 37665737 - 37665823
Alignment:
Q  536 gtccccgtgagtctagctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttattc 621  Q
    |||||||||||  || |||||||||||| ||||||   |||  ||| | ||||| |||||||| |||||||||||||||||||||||    
T  37665737 gtccccgtgagcttaactcatttggtaaaggataaaacatattatatgcaggggccggggttcaaaccccggacaccccacttattc 37665823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 628
Target Start/End: Complemental strand, 41417322 - 41417284
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||||||||| ||||||||||||||||| |||||    
T  41417322 cggggttcgaaccccagacaccccacttattcactttaa 41417284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 549 - 618
Target Start/End: Complemental strand, 42338336 - 42338266
Alignment:
Q  549 tagctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccactta 618  Q
    ||||||||||||||||| |||||| | || ||  | ||||| ||||||||||| |||||||||||||||||    
T  42338336 tagctcatttggtaaggaataatgcacaatatgtgcaggggacggggttcgaatcccggacaccccactta 42338266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 628
Target Start/End: Complemental strand, 42841828 - 42841790
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  42841828 cggggttcgaaccccagacaccccacttattcatcttaa 42841790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 535 - 616
Target Start/End: Complemental strand, 44662566 - 44662484
Alignment:
Q  535 agtccccgtgagtctagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccact 616  Q
    |||||| |||||  ||||||| | |||||||||||||| || |  || | |||||| ||||||||||||||||||||||||||    
T  44662566 agtccctgtgagcttagctcactaggtaagggataatgcattatgtatgcaggggccggggttcgaaccccggacaccccact 44662484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 628
Target Start/End: Original strand, 47355857 - 47355895
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  47355857 cggggttcgaaccccagacatcccacttattcattttaa 47355895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 585 - 622
Target Start/End: Original strand, 4169119 - 4169156
Alignment:
Q  585 aggggcggggttcgaaccccggacaccccacttattca 622  Q
    |||| ||||||| |||||||||||||||||||||||||    
T  4169119 agggccggggtttgaaccccggacaccccacttattca 4169156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 617
Target Start/End: Complemental strand, 9877339 - 9877259
Alignment:
Q  537 tccccgtgagtctagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccactt 617  Q
    ||||||||||  ||||||| |||||| |||||| || |||  ||| | |||||| |||||||||||||||||||||||||||    
T  9877339 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggggccggggttcgaaccccggacaccccactt 9877259  T

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Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 617
Target Start/End: Complemental strand, 10244961 - 10244881
Alignment:
Q  537 tccccgtgagtctagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccactt 617  Q
    ||||||||||  ||||||| |||||| |||||| || |||  ||| ||||| || |||||||||||||||||||||||||||    
T  10244961 tccccgtgagcttagctcagttggta-gggatattgcatattatatgtaggagccggggttcgaaccccggacaccccactt 10244881  T

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Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 609
Target Start/End: Original strand, 21066884 - 21066956
Alignment:
Q  537 tccccgtgagtctagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggaca 609  Q
    ||||||||||| ||||||| |||||| |||||| || |||  ||| |||||||| |||||||||||||||||||    
T  21066884 tccccgtgagtttagctcagttggta-gggatattgcatattatatgtaggggccggggttcgaaccccggaca 21066956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 617
Target Start/End: Complemental strand, 23102630 - 23102550
Alignment:
Q  537 tccccgtgagtctagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccactt 617  Q
    ||||||||||  ||||||| |||||| |||||| || |||  ||| | |||||| |||||||||||||||||||||||||||    
T  23102630 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggggccggggttcgaaccccggacaccccactt 23102550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 631
Target Start/End: Complemental strand, 24315452 - 24315359
Alignment:
Q  539 cccgtgagtctagctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttattcattttaaggt 631  Q
    ||||||||  |||||||||| |||| |||||||| | || ||  ||||||| |||||||||||||||  |||  ||||||||| ||||||||||    
T  24315452 cccgtgagcttagctcatttagtaatggataatgcacaatatgtgtaggggtcggggttcgaaccccatacattccacttatttattttaaggt 24315359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 590 - 627
Target Start/End: Complemental strand, 25711178 - 25711141
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcatttta 627  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  25711178 cggggttcgaacctcggacaccccacttattcacttta 25711141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 591 - 628
Target Start/End: Complemental strand, 31475886 - 31475849
Alignment:
Q  591 ggggttcgaaccccggacaccccacttattcattttaa 628  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  31475886 ggggttcgaacccctgacaccccacttattcactttaa 31475849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 593 - 622
Target Start/End: Original strand, 34948157 - 34948186
Alignment:
Q  593 ggttcgaaccccggacaccccacttattca 622  Q
    ||||||||||||||||||||||||||||||    
T  34948157 ggttcgaaccccggacaccccacttattca 34948186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 590 - 619
Target Start/End: Complemental strand, 44437872 - 44437843
Alignment:
Q  590 cggggttcgaaccccggacaccccacttat 619  Q
    ||||||||||||||||||||||||||||||    
T  44437872 cggggttcgaaccccggacaccccacttat 44437843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 585 - 622
Target Start/End: Original strand, 47552256 - 47552293
Alignment:
Q  585 aggggcggggttcgaaccccggacaccccacttattca 622  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  47552256 agggccggggttcgaaccccggacaccctacttattca 47552293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 537 - 617
Target Start/End: Complemental strand, 5990217 - 5990138
Alignment:
Q  537 tccccgtgagtctagctcatttggtaagggataatgtataagatacgtaggggcggggttcgaaccccggacaccccactt 617  Q
    ||||||||||  ||||||| |||||| |||||| ||||||  ||| | ||| ||||| |||||||||||||||| ||||||    
T  5990217 tccccgtgagcttagctcagttggta-gggatattgtatattatatgcaggcgcgggattcgaaccccggacactccactt 5990138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 618
Target Start/End: Original strand, 7465514 - 7465542
Alignment:
Q  590 cggggttcgaaccccggacaccccactta 618  Q
    |||||||||||||||||||||||||||||    
T  7465514 cggggttcgaaccccggacaccccactta 7465542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 8725185 - 8725153
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||| ||||||||||||||||    
T  8725185 cggggttcgaaccccgaacaccccacttattca 8725153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Original strand, 14102509 - 14102541
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    ||||||| |||||||||||||||||||||||||    
T  14102509 cggggtttgaaccccggacaccccacttattca 14102541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Original strand, 14412526 - 14412558
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    ||||||| |||||||||||||||||||||||||    
T  14412526 cggggtttgaaccccggacaccccacttattca 14412558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 23685601 - 23685569
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    ||||||||||||||| |||||||||||||||||    
T  23685601 cggggttcgaaccccagacaccccacttattca 23685569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 28693885 - 28693853
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    ||||||||||||||||||||||| |||||||||    
T  28693885 cggggttcgaaccccggacaccctacttattca 28693853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Original strand, 30152789 - 30152821
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||| ||||||||||||||||    
T  30152789 cggggttcgaaccccgaacaccccacttattca 30152821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 36316021 - 36315989
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    ||||||||||||| |||||||||||||||||||    
T  36316021 cggggttcgaacctcggacaccccacttattca 36315989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Original strand, 38451911 - 38451943
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    ||||||||||| |||||||||||||||||||||    
T  38451911 cggggttcgaatcccggacaccccacttattca 38451943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Original strand, 47880194 - 47880226
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    ||||||||||| |||||||||||||||||||||    
T  47880194 cggggttcgaatcccggacaccccacttattca 47880226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 543 - 622
Target Start/End: Original strand, 48525577 - 48525657
Alignment:
Q  543 tgagtctagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattca 622  Q
    |||||| | |||| ||||||||||| |||| |||  ||| | |||||  ||||||||||||||||||||| ||||||||||    
T  48525577 tgagtccaactcacttggtaagggacaatgcatattatatgcaggggttggggttcgaaccccggacacctcacttattca 48525657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 7e-17; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 536 - 631
Target Start/End: Complemental strand, 6228362 - 6228265
Alignment:
Q  536 gtccccgtgagtctagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    |||||| ||||  |||||||||||||||||||||||| | || ||  | |||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  6228362 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggt 6228265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 549 - 631
Target Start/End: Original strand, 17216964 - 17217048
Alignment:
Q  549 tagctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    |||||||||||||||||||||||| |||| ||  ||||||| ||| |||||||| ||||||||||||||||||||| ||||||||    
T  17216964 tagctcatttggtaagggataatgcataatatgtgtaggggtcggagttcgaactccggacaccccacttattcatctttaaggt 17217048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 536 - 631
Target Start/End: Complemental strand, 4854408 - 4854311
Alignment:
Q  536 gtccccgtgagtctagctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    |||||| ||||  |||||||||||| ||||||||||||| ||  |  | ||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  4854408 gtccccatgagcttagctcatttggcaagggataatgtacaatgtgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggt 4854311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 537 - 631
Target Start/End: Complemental strand, 20415663 - 20415567
Alignment:
Q  537 tccccgtgagtctagctcatttggtaagggataatgtataagatacgtaggggcg-gggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    ||||| ||||| |||||||||| ||||||||||||| | || ||  | ||||||  |||||||||||||||||||||||||||||||| ||||||||    
T  20415663 tccccatgagtttagctcattttgtaagggataatgcacaatatgtgcaggggccagggttcgaaccccggacaccccacttattcatctttaaggt 20415567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 549 - 631
Target Start/End: Original strand, 19748105 - 19748188
Alignment:
Q  549 tagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattcattttaaggt 631  Q
    |||||||||||||||||||||||| | || ||  | ||||   |||||||||||| ||||||||||||||||||||||||||||    
T  19748105 tagctcatttggtaagggataatgcacaatatgtgcagggattggggttcgaaccacggacaccccacttattcattttaaggt 19748188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 535 - 631
Target Start/End: Complemental strand, 18903470 - 18903372
Alignment:
Q  535 agtccccgtgagtctagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    ||||||| ||||  |||||||||||| ||||||||||  | || ||  | |||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  18903470 agtccccatgagcttagctcatttggcaagggataatacacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggt 18903372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 555 - 622
Target Start/End: Complemental strand, 35065572 - 35065505
Alignment:
Q  555 atttggtaagggataatgtataagatacgtaggggcggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||| ||||  || |||||||| ||||||||||| ||||||| | |||||||||    
T  35065572 atttggtaagggataatgcataatttatgtaggggccgggttcgaaccacggacactctacttattca 35065505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 590 - 628
Target Start/End: Original strand, 29284166 - 29284204
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  29284166 cggggttcgaaccccggacaccccacttattcactttaa 29284204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 590 - 623
Target Start/End: Original strand, 3448400 - 3448433
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcat 623  Q
    ||||||||||||||||||||||||||||||||||    
T  3448400 cggggttcgaaccccggacaccccacttattcat 3448433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 583 - 628
Target Start/End: Original strand, 6144005 - 6144050
Alignment:
Q  583 gtaggggcggggttcgaaccccggacaccccacttattcattttaa 628  Q
    |||||||  ||||||||||||||||||||||||||||||| |||||    
T  6144005 gtaggggtcgggttcgaaccccggacaccccacttattcactttaa 6144050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 590 - 623
Target Start/End: Original strand, 22983628 - 22983661
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcat 623  Q
    ||||||||||||||||||||||||||||||||||    
T  22983628 cggggttcgaaccccggacaccccacttattcat 22983661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 590 - 623
Target Start/End: Complemental strand, 23804780 - 23804747
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcat 623  Q
    ||||||||||||||||||||||||||||||||||    
T  23804780 cggggttcgaaccccggacaccccacttattcat 23804747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 591 - 628
Target Start/End: Complemental strand, 33628987 - 33628950
Alignment:
Q  591 ggggttcgaaccccggacaccccacttattcattttaa 628  Q
    |||||||||||||||||||||||||||||||| |||||    
T  33628987 ggggttcgaaccccggacaccccacttattcactttaa 33628950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 9491782 - 9491750
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||||||    
T  9491782 cggggttcgaaccccggacaccccacttattca 9491750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 231
Target Start/End: Complemental strand, 4912419 - 4912372
Alignment:
Q  184 gctatttgaagtagtttaacaaaaaatgctataagttagtaagaaaat 231  Q
    |||| ||||||||||||| |||||||||||||||| |||||| |||||    
T  4912419 gctacttgaagtagtttatcaaaaaatgctataagctagtaaaaaaat 4912372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 590 - 621
Target Start/End: Complemental strand, 6658590 - 6658559
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattc 621  Q
    ||||||||||||||||||||||||||||||||    
T  6658590 cggggttcgaaccccggacaccccacttattc 6658559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 590 - 621
Target Start/End: Complemental strand, 19680295 - 19680264
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattc 621  Q
    ||||||||||||||||||||||||||||||||    
T  19680295 cggggttcgaaccccggacaccccacttattc 19680264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 536 - 622
Target Start/End: Complemental strand, 20568358 - 20568272
Alignment:
Q  536 gtccccgtgagtctagctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||  ||||||| ||||||||| | | || |||| ||| | ||||| |||||||||||||||| ||||||||||||||||    
T  20568358 gtccccgtgagcttagctcagttggtaagg-acattgcataatatatgcaggggtcggggttcgaaccccgaacaccccacttattca 20568272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 552 - 626
Target Start/End: Complemental strand, 30422194 - 30422119
Alignment:
Q  552 ctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttattcatttt 626  Q
    ||||||||||||||||||||||| || ||  ||||||| | |||||||||| ||||||||| || ||||| |||||    
T  30422194 ctcatttggtaagggataatgtacaatatgtgtaggggtccgggttcgaactccggacaccacatttatttatttt 30422119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 590 - 621
Target Start/End: Original strand, 30833065 - 30833096
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattc 621  Q
    ||||||||||||||||||||||||||||||||    
T  30833065 cggggttcgaaccccggacaccccacttattc 30833096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 552 - 622
Target Start/End: Complemental strand, 5641775 - 5641705
Alignment:
Q  552 ctcatttggtaagggataatgtataagatacgtaggggcggggttcgaaccccggacaccccacttattca 622  Q
    |||| ||||||| |||||||| ||||  || | |||  |||||||||||| ||||||||||||||||||||    
T  5641775 ctcacttggtaatggataatgcataatttatgcaggaccggggttcgaactccggacaccccacttattca 5641705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 628
Target Start/End: Complemental strand, 14981749 - 14981711
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    |||||||||||||| |||||||||||||||||| |||||    
T  14981749 cggggttcgaaccctggacaccccacttattcactttaa 14981711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 592 - 622
Target Start/End: Complemental strand, 25020573 - 25020543
Alignment:
Q  592 gggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||||    
T  25020573 gggttcgaaccccggacaccccacttattca 25020543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 593 - 622
Target Start/End: Complemental strand, 17751381 - 17751352
Alignment:
Q  593 ggttcgaaccccggacaccccacttattca 622  Q
    ||||||||||||||||||||||||||||||    
T  17751381 ggttcgaaccccggacaccccacttattca 17751352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 617
Target Start/End: Original strand, 29284264 - 29284344
Alignment:
Q  537 tccccgtgagtctagctcatttggtaagggataatgtataagatacgtaggggcggg-gttcgaaccccggacaccccactt 617  Q
    ||||||||||| ||||||| |||||| |||||| || |||  ||| | |||||| || ||||||||||||||||||||||||    
T  29284264 tccccgtgagtttagctcagttggta-gggatattgcatattatatgaaggggccggagttcgaaccccggacaccccactt 29284344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 552 - 623
Target Start/End: Complemental strand, 1128505 - 1128433
Alignment:
Q  552 ctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattcat 623  Q
    |||||||| |||||||||||| |||| ||  | |||||  |||||||||||||| ||||||||| ||||||||    
T  1128505 ctcatttgataagggataatgcataatatgtgcaggggttggggttcgaaccccagacaccccatttattcat 1128433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 538 - 617
Target Start/End: Original strand, 2251837 - 2251916
Alignment:
Q  538 ccccgtgagtctagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccactt 617  Q
    |||||||||  ||||||| |||||| |||||| || |||  ||| | |||||| |||||||||||||||||||||||||||    
T  2251837 ccccgtgagcttagctcagttggta-gggatattgcatactatatgcaggggccggggttcgaaccccggacaccccactt 2251916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Original strand, 3294815 - 3294847
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||| ||||    
T  3294815 cggggttcgaaccccggacaccccacttcttca 3294847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 594 - 622
Target Start/End: Complemental strand, 7720546 - 7720518
Alignment:
Q  594 gttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||    
T  7720546 gttcgaaccccggacaccccacttattca 7720518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 10377171 - 10377139
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||| ||||||||||||||||    
T  10377171 cggggttcgaaccccgaacaccccacttattca 10377139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 549 - 631
Target Start/End: Original strand, 11552877 - 11552961
Alignment:
Q  549 tagctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    |||||||||||| ||||||||| ||| ||  |  | ||||| ||||||||||||||| | |||||||||||||||| ||||||||    
T  11552877 tagctcatttggcaagggataacgtacaatgtgtgcaggggccggggttcgaaccccaggcaccccacttattcatctttaaggt 11552961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 591 - 623
Target Start/End: Original strand, 11611418 - 11611450
Alignment:
Q  591 ggggttcgaaccccggacaccccacttattcat 623  Q
    ||||||||||||| |||||||||||||||||||    
T  11611418 ggggttcgaaccctggacaccccacttattcat 11611450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 594 - 622
Target Start/End: Original strand, 12089149 - 12089177
Alignment:
Q  594 gttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||    
T  12089149 gttcgaaccccggacaccccacttattca 12089177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 591 - 623
Target Start/End: Complemental strand, 18618585 - 18618553
Alignment:
Q  591 ggggttcgaaccccggacaccccacttattcat 623  Q
    |||||||||| ||||||||||||||||||||||    
T  18618585 ggggttcgaatcccggacaccccacttattcat 18618553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 19642594 - 19642562
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    ||||||||||||||| |||||||||||||||||    
T  19642594 cggggttcgaaccccagacaccccacttattca 19642562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 583 - 622
Target Start/End: Complemental strand, 26669714 - 26669674
Alignment:
Q  583 gtaggggc-ggggttcgaaccccggacaccccacttattca 622  Q
    |||||||| |||||||||||||| |||||||||||||||||    
T  26669714 gtaggggctggggttcgaaccccagacaccccacttattca 26669674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 553 - 620
Target Start/End: Complemental strand, 29322061 - 29321993
Alignment:
Q  553 tcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttatt 620  Q
    |||||||||||||||||||| | || ||  | |||||| |||||||||||||| |||| ||||||||||    
T  29322061 tcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccagacatcccacttatt 29321993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 592 - 628
Target Start/End: Complemental strand, 34675851 - 34675815
Alignment:
Q  592 gggttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  34675851 gggttcgaaccccggacaccccagttattcactttaa 34675815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 7e-17; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 536 - 631
Target Start/End: Complemental strand, 38503359 - 38503262
Alignment:
Q  536 gtccccgtgagtctagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    |||||| ||||  |||||||||||||||||||||||| | || ||  | |||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  38503359 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggt 38503262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 549 - 631
Target Start/End: Original strand, 31250153 - 31250237
Alignment:
Q  549 tagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    |||||||||||||||||||||||| | || ||  | |||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  31250153 tagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggt 31250237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 549 - 631
Target Start/End: Original strand, 43227872 - 43227956
Alignment:
Q  549 tagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    |||||||||||||||||||||||| | || ||  | |||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  43227872 tagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggt 43227956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 549 - 628
Target Start/End: Original strand, 17077367 - 17077447
Alignment:
Q  549 tagctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    |||||||||||||||||||||||| | ||  |  | ||||| |||| ||||||||||||||||||||||||||||| ||||    
T  17077367 tagctcatttggtaagggataatgcacaatttgtgcaggggtcgggattcgaaccccggacaccccacttattcatcttaa 17077447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 590 - 628
Target Start/End: Original strand, 1463919 - 1463957
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  1463919 cggggttcgaaccccggacaccccacttattcactttaa 1463957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 590 - 628
Target Start/End: Complemental strand, 4674862 - 4674824
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  4674862 cggggttcgaaccccggacaccccacttattcactttaa 4674824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 590 - 628
Target Start/End: Original strand, 10943764 - 10943802
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  10943764 cggggttcgaaccccggacaccccacttattcactttaa 10943802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 590 - 628
Target Start/End: Complemental strand, 36045181 - 36045143
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  36045181 cggggttcgaaccccggacaccccacttattcactttaa 36045143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 537 - 617
Target Start/End: Original strand, 12891555 - 12891635
Alignment:
Q  537 tccccgtgagtctagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccactt 617  Q
    ||||||||||  ||||||| |||||| |||||| || |||  ||| |||||||| |||||||||||||||||||||||||||    
T  12891555 tccccgtgagcttagctcagttggta-gggatattgcatattatatgtaggggccggggttcgaaccccggacaccccactt 12891635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 590 - 623
Target Start/End: Complemental strand, 15106934 - 15106901
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcat 623  Q
    ||||||||||||||||||||||||||||||||||    
T  15106934 cggggttcgaaccccggacaccccacttattcat 15106901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 585 - 622
Target Start/End: Complemental strand, 38618733 - 38618696
Alignment:
Q  585 aggggcggggttcgaaccccggacaccccacttattca 622  Q
    |||| |||||||||||||||||||||||||||||||||    
T  38618733 agggccggggttcgaaccccggacaccccacttattca 38618696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 843415 - 843383
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||||||    
T  843415 cggggttcgaaccccggacaccccacttattca 843383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 3535983 - 3535951
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||||||    
T  3535983 cggggttcgaaccccggacaccccacttattca 3535951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 590 - 622
Target Start/End: Original strand, 8015883 - 8015915
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||||||    
T  8015883 cggggttcgaaccccggacaccccacttattca 8015915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 591 - 623
Target Start/End: Complemental strand, 22397034 - 22397002
Alignment:
Q  591 ggggttcgaaccccggacaccccacttattcat 623  Q
    |||||||||||||||||||||||||||||||||    
T  22397034 ggggttcgaaccccggacaccccacttattcat 22397002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 590 - 622
Target Start/End: Original strand, 28537183 - 28537215
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||||||    
T  28537183 cggggttcgaaccccggacaccccacttattca 28537215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 552 - 622
Target Start/End: Original strand, 34729481 - 34729551
Alignment:
Q  552 ctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttattca 622  Q
    |||| |||||||||||||||| |||  ||| | ||||| |||||||||||||| ||||||||||||||||||    
T  34729481 ctcacttggtaagggataatgcatattatatgcaggggtcggggttcgaaccc-ggacaccccacttattca 34729551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 628
Target Start/End: Complemental strand, 6447527 - 6447489
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||||||| ||||||||||||||||||| |||||    
T  6447527 cggggttcgaacctcggacaccccacttattcactttaa 6447489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 628
Target Start/End: Complemental strand, 20735222 - 20735184
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  20735222 cggggttcgaatcccggacaccccacttattcactttaa 20735184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 628
Target Start/End: Original strand, 37303982 - 37304020
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    |||||||||||||| |||||||||||||||||| |||||    
T  37303982 cggggttcgaaccctggacaccccacttattcactttaa 37304020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 591 - 628
Target Start/End: Original strand, 1572159 - 1572196
Alignment:
Q  591 ggggttcgaaccccggacaccccacttattcattttaa 628  Q
    |||||||||||||||||| |||||||||||||| ||||    
T  1572159 ggggttcgaaccccggactccccacttattcatcttaa 1572196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 590 - 623
Target Start/End: Complemental strand, 6614085 - 6614052
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcat 623  Q
    ||||||||||||| ||||||||||||||||||||    
T  6614085 cggggttcgaacctcggacaccccacttattcat 6614052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 594 - 623
Target Start/End: Original strand, 10106682 - 10106711
Alignment:
Q  594 gttcgaaccccggacaccccacttattcat 623  Q
    ||||||||||||||||||||||||||||||    
T  10106682 gttcgaaccccggacaccccacttattcat 10106711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 591 - 628
Target Start/End: Complemental strand, 18303124 - 18303087
Alignment:
Q  591 ggggttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||||||||| |||||||||||||||| |||||    
T  18303124 ggggttcgaaccccgaacaccccacttattcactttaa 18303087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 590 - 631
Target Start/End: Original strand, 18872569 - 18872610
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaaggt 631  Q
    |||||||||||||||| ||||||||||||||||  |||||||    
T  18872569 cggggttcgaaccccgaacaccccacttattcaccttaaggt 18872610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 585 - 622
Target Start/End: Complemental strand, 29096360 - 29096323
Alignment:
Q  585 aggggcggggttcgaaccccggacaccccacttattca 622  Q
    |||| ||| |||||||||||||||||||||||||||||    
T  29096360 agggccggagttcgaaccccggacaccccacttattca 29096323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 593 - 622
Target Start/End: Complemental strand, 35168676 - 35168647
Alignment:
Q  593 ggttcgaaccccggacaccccacttattca 622  Q
    ||||||||||||||||||||||||||||||    
T  35168676 ggttcgaaccccggacaccccacttattca 35168647  T

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Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 590 - 623
Target Start/End: Complemental strand, 42801488 - 42801455
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcat 623  Q
    |||||||||||||||||||||| |||||||||||    
T  42801488 cggggttcgaaccccggacacctcacttattcat 42801455  T

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Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 617
Target Start/End: Original strand, 42916387 - 42916467
Alignment:
Q  537 tccccgtgagtctagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccactt 617  Q
    ||||||||||  ||||||| |||||| |||||| |||||   ||| | |||||| |||||||||||||||||||||||||||    
T  42916387 tccccgtgagcttagctcagttggta-gggatattgtatgttatatgcaggggccggggttcgaaccccggacaccccactt 42916467  T

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Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 585 - 617
Target Start/End: Original strand, 8241096 - 8241128
Alignment:
Q  585 aggggcggggttcgaaccccggacaccccactt 617  Q
    |||| ||||||||||||||||||||||||||||    
T  8241096 agggtcggggttcgaaccccggacaccccactt 8241128  T

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Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Original strand, 18478051 - 18478083
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||| ||||||||||||||||||    
T  18478051 cggggttcgaaccctggacaccccacttattca 18478083  T

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Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 19059051 - 19059019
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||| ||||||||||||||||||    
T  19059051 cggggttcgaaccctggacaccccacttattca 19059019  T

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Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Original strand, 20191489 - 20191521
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    ||||||||||||||||||||| |||||||||||    
T  20191489 cggggttcgaaccccggacactccacttattca 20191521  T

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Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 594 - 622
Target Start/End: Original strand, 31556870 - 31556898
Alignment:
Q  594 gttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||    
T  31556870 gttcgaaccccggacaccccacttattca 31556898  T

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Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 32158461 - 32158429
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||| ||||||||||||||||    
T  32158461 cggggttcgaaccccgaacaccccacttattca 32158429  T

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Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Original strand, 33800941 - 33800973
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    ||||||||||||||| |||||||||||||||||    
T  33800941 cggggttcgaaccccagacaccccacttattca 33800973  T

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Target: chr1 (Bit Score: 45; Significance: 3e-16; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 549 - 631
Target Start/End: Complemental strand, 24134713 - 24134629
Alignment:
Q  549 tagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    |||||||||||||||||||||||| | || ||  | |||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  24134713 tagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggt 24134629  T

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Target: chr1; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 532 - 623
Target Start/End: Complemental strand, 34702419 - 34702327
Alignment:
Q  532 ttaagtccccgtgagtctagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattcat 623  Q
    |||||||||| ||||  |||||||||||||||||||||||| | || ||  | |||||| ||||||||||||||||||||| |||||||||||    
T  34702419 ttaagtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacacctcacttattcat 34702327  T

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Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 549 - 622
Target Start/End: Original strand, 19424052 - 19424126
Alignment:
Q  549 tagctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttattca 622  Q
    ||||||||||| |||||||||||| |||  ||| | ||||| |||||||||||||||||||||||||||||||||    
T  19424052 tagctcatttgataagggataatgcatattatatgcaggggtcggggttcgaaccccggacaccccacttattca 19424126  T

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Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 549 - 628
Target Start/End: Original strand, 7438627 - 7438707
Alignment:
Q  549 tagctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    |||||||||||||||||||||||| | ||  |  ||||||| |||||||||||| ||||||||||||||||||||| ||||    
T  7438627 tagctcatttggtaagggataatgcacaatttgtgtaggggtcggggttcgaactccggacaccccacttattcatcttaa 7438707  T

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Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 552 - 631
Target Start/End: Complemental strand, 14262807 - 14262726
Alignment:
Q  552 ctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    |||||||| |||||||||||| | || ||| | ||||| ||||||||||||||||||||||| |||||||||| ||||||||    
T  14262807 ctcatttgataagggataatgcacaatatatgcaggggtcggggttcgaaccccggacaccctacttattcatctttaaggt 14262726  T

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Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 590 - 627
Target Start/End: Original strand, 15368853 - 15368890
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcatttta 627  Q
    ||||||||||||||||||||||||||||||||||||||    
T  15368853 cggggttcgaaccccggacaccccacttattcatttta 15368890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 535 - 623
Target Start/End: Original strand, 49619964 - 49620053
Alignment:
Q  535 agtccccgtgagtctagctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttattcat 623  Q
    ||||||| ||||  |||||||||||||||||||||||| | || ||  | ||||| ||||||||  ||||||||||||||||||||||||    
T  49619964 agtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggtcggggttcagaccccggacaccccacttattcat 49620053  T

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Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 536 - 631
Target Start/End: Original strand, 50011500 - 50011597
Alignment:
Q  536 gtccccgtgagtctagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    |||||| ||||  |||||||||||||||||||||||| | || ||  | |||||| |||||||||||||| |||| ||||||||||||| ||||||||    
T  50011500 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccagacatcccacttattcatctttaaggt 50011597  T

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Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 536 - 623
Target Start/End: Complemental strand, 15417919 - 15417831
Alignment:
Q  536 gtccccgtgagtctagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattcat 623  Q
    |||||| ||||  ||||||||||||||| |||||||| | || ||  |||||||| |||||||||| | ||||||||||||||||||||    
T  15417919 gtccccatgagcttagctcatttggtaaaggataatgcacaatatgtgtaggggctggggttcgaagctcggacaccccacttattcat 15417831  T

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Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 549 - 631
Target Start/End: Complemental strand, 43109327 - 43109243
Alignment:
Q  549 tagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    |||||||||||||||||||||||| | || ||  | |||||| ||||||||||||||||||||| || |||||||| ||||||||    
T  43109327 tagctcatttggtaagggataatgcaaaatatgtgcaggggccggggttcgaaccccggacacctcatttattcatctttaaggt 43109243  T

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Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 549 - 631
Target Start/End: Complemental strand, 2017773 - 2017690
Alignment:
Q  549 tagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattcattttaaggt 631  Q
    |||||||||||||||||||||||| | || ||  | |  ||| |||||||||| |||||||||||||||| |||||||||||||    
T  2017773 tagctcatttggtaagggataatgcacaatatgtgcataggctggggttcgaatcccggacaccccacttgttcattttaaggt 2017690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 549 - 631
Target Start/End: Original strand, 47651878 - 47651961
Alignment:
Q  549 tagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattcattttaaggt 631  Q
    |||||||||||||||||||||||| | || ||  | |||||| |||||||||| ||  |||| |||||||||||||||||||||    
T  47651878 tagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaatcctagacatcccacttattcattttaaggt 47651961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 590 - 628
Target Start/End: Original strand, 17350109 - 17350147
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  17350109 cggggttcgaaccccggacaccccacttattcactttaa 17350147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 590 - 628
Target Start/End: Original strand, 29491518 - 29491556
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  29491518 cggggttcgaaccccggacaccccacttattcactttaa 29491556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 535 - 631
Target Start/End: Original strand, 40061435 - 40061533
Alignment:
Q  535 agtccccgtgagtctagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    ||||||| ||||  || |||||||||||||||||| || | || ||   ||||||| ||||||||||| ||||||||||||||||||||| ||||||||    
T  40061435 agtccccatgagcttaactcatttggtaagggatagtgcacaatatgtataggggctggggttcgaactccggacaccccacttattcatctttaaggt 40061533  T

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Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 552 - 631
Target Start/End: Complemental strand, 4684263 - 4684182
Alignment:
Q  552 ctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    ||||||||||||||||||||||| || ||| ||||||| |||||||||||   |||| |||||| |||||||| ||||||||    
T  4684263 ctcatttggtaagggataatgtacaatatatgtaggggtcggggttcgaagttcggataccccatttattcatctttaaggt 4684182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 552 - 631
Target Start/End: Complemental strand, 10123138 - 10123058
Alignment:
Q  552 ctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    |||||||||||||||||||| || || ||  ||||||| |||||||||||||||  ||||||||||||||||| ||||||||    
T  10123138 ctcatttggtaagggataat-tacaatatgtgtaggggtcggggttcgaaccccaaacaccccacttattcatctttaaggt 10123058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 536 - 631
Target Start/End: Complemental strand, 12973380 - 12973283
Alignment:
Q  536 gtccccgtgagtctagctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    |||||| ||||| |||||||||||||||||||||||| | || ||| | ||||| || | ||| ||| || |||||||||||||||||| ||||||||    
T  12973380 gtccccatgagtttagctcatttggtaagggataatgcacaatatatgcaggggccgagattcaaactcctgacaccccacttattcatctttaaggt 12973283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 549 - 618
Target Start/End: Complemental strand, 34940505 - 34940436
Alignment:
Q  549 tagctcatttggtaagggataatgtataagatacgtaggggcggggttcgaaccccggacaccccactta 618  Q
    ||||||| |||||||||||||||| |||  ||| | |||||   ||||||||||||||||||||||||||    
T  34940505 tagctcacttggtaagggataatgcatattatatgcaggggtcaggttcgaaccccggacaccccactta 34940436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 9768856 - 9768824
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||||||    
T  9768856 cggggttcgaaccccggacaccccacttattca 9768824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 590 - 622
Target Start/End: Original strand, 11405504 - 11405536
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||||||    
T  11405504 cggggttcgaaccccggacaccccacttattca 11405536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 15774359 - 15774327
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||||||    
T  15774359 cggggttcgaaccccggacaccccacttattca 15774327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 553 - 631
Target Start/End: Complemental strand, 25031582 - 25031502
Alignment:
Q  553 tcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    |||||||||||| ||||||| |||| ||  | |||||| ||||||||||  ||||||||||||||||||||| ||||||||    
T  25031582 tcatttggtaagagataatgcataatatgtgcaggggccggggttcgaattccggacaccccacttattcatctttaaggt 25031502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 553 - 628
Target Start/End: Complemental strand, 25800418 - 25800342
Alignment:
Q  553 tcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||| |||||||||||||| | ||  || |||||| | ||||||| ||||||||||||||||||||||||| ||||    
T  25800418 tcattcggtaagggataatgcacaatttatgtagggtccggggttccaaccccggacaccccacttattcatcttaa 25800342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 590 - 622
Target Start/End: Original strand, 33844665 - 33844697
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||||||    
T  33844665 cggggttcgaaccccggacaccccacttattca 33844697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 33949313 - 33949281
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||||||    
T  33949313 cggggttcgaaccccggacaccccacttattca 33949281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 590 - 622
Target Start/End: Original strand, 37733803 - 37733835
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||||||    
T  37733803 cggggttcgaaccccggacaccccacttattca 37733835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 50199523 - 50199491
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||||||    
T  50199523 cggggttcgaaccccggacaccccacttattca 50199491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 591 - 622
Target Start/End: Complemental strand, 9769626 - 9769595
Alignment:
Q  591 ggggttcgaaccccggacaccccacttattca 622  Q
    ||||||||||||||||||||||||||||||||    
T  9769626 ggggttcgaaccccggacaccccacttattca 9769595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 591 - 622
Target Start/End: Original strand, 12553243 - 12553274
Alignment:
Q  591 ggggttcgaaccccggacaccccacttattca 622  Q
    ||||||||||||||||||||||||||||||||    
T  12553243 ggggttcgaaccccggacaccccacttattca 12553274  T

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Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 591 - 622
Target Start/End: Original strand, 32635189 - 32635220
Alignment:
Q  591 ggggttcgaaccccggacaccccacttattca 622  Q
    ||||||||||||||||||||||||||||||||    
T  32635189 ggggttcgaaccccggacaccccacttattca 32635220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 585 - 628
Target Start/End: Original strand, 35111692 - 35111735
Alignment:
Q  585 aggggcggggttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||||||||||||||  |||||||||||||||| |||||    
T  35111692 aggggcggggttcgaacccctaacaccccacttattcactttaa 35111735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 593 - 628
Target Start/End: Original strand, 39238767 - 39238802
Alignment:
Q  593 ggttcgaaccccggacaccccacttattcattttaa 628  Q
    |||||||||||||||||||||||||||||| |||||    
T  39238767 ggttcgaaccccggacaccccacttattcactttaa 39238802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 583 - 617
Target Start/End: Original strand, 3311551 - 3311585
Alignment:
Q  583 gtaggggcggggttcgaaccccggacaccccactt 617  Q
    |||||| ||||||||||||||||||||||||||||    
T  3311551 gtagggtcggggttcgaaccccggacaccccactt 3311585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 631
Target Start/End: Complemental strand, 3347750 - 3347708
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    |||||||||||||||| ||||||||||||||||| ||||||||    
T  3347750 cggggttcgaaccccgtacaccccacttattcatctttaaggt 3347708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 628
Target Start/End: Complemental strand, 19976599 - 19976561
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    |||||||||||||||||||||||||| |||||| |||||    
T  19976599 cggggttcgaaccccggacaccccacatattcactttaa 19976561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 628
Target Start/End: Original strand, 25819233 - 25819271
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    |||||||||||||||||| |||||||||||||| |||||    
T  25819233 cggggttcgaaccccggataccccacttattcactttaa 25819271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 552 - 622
Target Start/End: Original strand, 29332295 - 29332364
Alignment:
Q  552 ctcatttggtaagggataatgtataagatacgtaggggcggggttcgaaccccggacaccccacttattca 622  Q
    |||| ||| ||||||||||||||||  || | | ||| ||||||| |||||||||||||||||||||||||    
T  29332295 ctcacttgataagggataatgtatataatgcat-gggccggggtttgaaccccggacaccccacttattca 29332364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 591 - 625
Target Start/End: Original strand, 32585397 - 32585431
Alignment:
Q  591 ggggttcgaaccccggacaccccacttattcattt 625  Q
    ||||||||||||||||||||||||||| |||||||    
T  32585397 ggggttcgaaccccggacaccccactttttcattt 32585431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 594 - 628
Target Start/End: Original strand, 38021304 - 38021338
Alignment:
Q  594 gttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||||||||||||||||||||||| |||||    
T  38021304 gttcgaaccccggacaccccacttattcactttaa 38021338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 628
Target Start/End: Original strand, 40678871 - 40678909
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    |||||||||| |||||||||||||||||||||| |||||    
T  40678871 cggggttcgatccccggacaccccacttattcactttaa 40678909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 543 - 631
Target Start/End: Complemental strand, 48497308 - 48497218
Alignment:
Q  543 tgagtctagctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    ||||| |||||||||||||||||||||||| | || ||  | ||||| ||| ||||||| ||||||||| ||| |||||||| ||||||||    
T  48497308 tgagtttagctcatttggtaagggataatgcacaatatgtgcaggggccggagttcgaatcccggacactccatttattcatctttaaggt 48497218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 590 - 619
Target Start/End: Complemental strand, 2052729 - 2052700
Alignment:
Q  590 cggggttcgaaccccggacaccccacttat 619  Q
    ||||||||||||||||||||||||||||||    
T  2052729 cggggttcgaaccccggacaccccacttat 2052700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 536 - 631
Target Start/End: Original strand, 4126892 - 4126989
Alignment:
Q  536 gtccccgtgagtctagctcatttggtaagggataatgtataagatacgtag-gggcggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    |||||| ||||| |||||||||||||||||||||||| | || ||| | || || ||  ||| |||| |||||||||||| |||||||| ||||||||    
T  4126892 gtccccatgagtttagctcatttggtaagggataatgcacaatatatgcagaggccgatgtttgaacaccggacaccccatttattcatctttaaggt 4126989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 590 - 623
Target Start/End: Complemental strand, 11238075 - 11238042
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcat 623  Q
    ||||||||||| ||||||||||||||||||||||    
T  11238075 cggggttcgaatcccggacaccccacttattcat 11238042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 583 - 623
Target Start/End: Original strand, 16182849 - 16182890
Alignment:
Q  583 gtaggggc-ggggttcgaaccccggacaccccacttattcat 623  Q
    |||||||| ||||||| |||||||||||||||||||||||||    
T  16182849 gtaggggctggggttcaaaccccggacaccccacttattcat 16182890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 617
Target Start/End: Original strand, 21265654 - 21265734
Alignment:
Q  537 tccccgtgagtctagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccactt 617  Q
    ||||||||||  ||||||| |||||| |||||| || |||  ||| | |||||| |||||||||||||||||||||||||||    
T  21265654 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggggccggggttcgaaccccggacaccccactt 21265734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 590 - 627
Target Start/End: Complemental strand, 23464033 - 23463996
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcatttta 627  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  23464033 cggggttcgaaccccggacaccccacttgttcacttta 23463996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 585 - 622
Target Start/End: Complemental strand, 32711196 - 32711159
Alignment:
Q  585 aggggcggggttcgaaccccggacaccccacttattca 622  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  32711196 agggccggggttcgaaccccagacaccccacttattca 32711159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 617
Target Start/End: Original strand, 33207203 - 33207283
Alignment:
Q  537 tccccgtgagtctagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccactt 617  Q
    ||||||||||  ||||||| |||||| |||||| || |||  ||| | |||||| |||||||||||||||||||||||||||    
T  33207203 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggggccggggttcgaaccccggacaccccactt 33207283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 590 - 623
Target Start/End: Original strand, 37203236 - 37203269
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcat 623  Q
    ||||||||||||||||||||||| ||||||||||    
T  37203236 cggggttcgaaccccggacaccctacttattcat 37203269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 585 - 622
Target Start/End: Complemental strand, 41833587 - 41833550
Alignment:
Q  585 aggggcggggttcgaaccccggacaccccacttattca 622  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  41833587 agggtcggggttcgaaccccgaacaccccacttattca 41833550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 617
Target Start/End: Complemental strand, 42490482 - 42490402
Alignment:
Q  537 tccccgtgagtctagctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccactt 617  Q
    ||||||||||  ||||||| |||||| |||||| || |||  ||| | ||||| ||||||||||||||||||||||||||||    
T  42490482 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggggtcggggttcgaaccccggacaccccactt 42490402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 562 - 622
Target Start/End: Complemental strand, 42946543 - 42946482
Alignment:
Q  562 aagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattca 622  Q
    ||||||||||| |||  ||| | |||||| |||||| |||||||||||||||||||||||||    
T  42946543 aagggataatgcatattatatgcaggggctggggtttgaaccccggacaccccacttattca 42946482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 2903074 - 2903042
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||| ||||||||||||||||    
T  2903074 cggggttcgaaccccgaacaccccacttattca 2903042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 3341783 - 3341751
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    ||||| |||||||||||||||||||||||||||    
T  3341783 cggggatcgaaccccggacaccccacttattca 3341751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 9976431 - 9976399
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||| ||||||||||||||||||||    
T  9976431 cggggttcgaactccggacaccccacttattca 9976399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 537 - 573
Target Start/End: Complemental strand, 16986027 - 16985991
Alignment:
Q  537 tccccgtgagtctagctcatttggtaagggataatgt 573  Q
    ||||| ||||| |||||||||||||||||||||||||    
T  16986027 tccccatgagtttagctcatttggtaagggataatgt 16985991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 587 - 623
Target Start/End: Complemental strand, 17871131 - 17871095
Alignment:
Q  587 gggcggggttcgaaccccggacaccccacttattcat 623  Q
    ||||||||||||||||||| |||||| ||||||||||    
T  17871131 gggcggggttcgaaccccgaacaccctacttattcat 17871095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 538 - 601
Target Start/End: Original strand, 17916702 - 17916766
Alignment:
Q  538 ccccgtgagtctagctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaac 601  Q
    |||||||||  ||||||||||||||| ||||||||||| | ||| | ||||| ||||||||||||    
T  17916702 ccccgtgagcttagctcatttggtaaaggataatgtattatatatgcaggggtcggggttcgaac 17916766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 594 - 622
Target Start/End: Complemental strand, 23368775 - 23368747
Alignment:
Q  594 gttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||    
T  23368775 gttcgaaccccggacaccccacttattca 23368747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 24168626 - 24168594
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    ||||||||||||||| |||||||||||||||||    
T  24168626 cggggttcgaaccccagacaccccacttattca 24168594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Original strand, 27745205 - 27745237
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    ||||||||||||||||||||||||| |||||||    
T  27745205 cggggttcgaaccccggacaccccatttattca 27745237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Original strand, 41182822 - 41182854
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    ||||||| |||||||||||||||||||||||||    
T  41182822 cggggtttgaaccccggacaccccacttattca 41182854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Original strand, 41677108 - 41677140
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||| ||||||||||||||||||||    
T  41677108 cggggttcgaactccggacaccccacttattca 41677140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 585 - 617
Target Start/End: Original strand, 44732679 - 44732711
Alignment:
Q  585 aggggcggggttcgaaccccggacaccccactt 617  Q
    |||| ||||||||||||||||||||||||||||    
T  44732679 agggccggggttcgaaccccggacaccccactt 44732711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 594 - 622
Target Start/End: Complemental strand, 48260232 - 48260204
Alignment:
Q  594 gttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||    
T  48260232 gttcgaaccccggacaccccacttattca 48260204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 596 - 631
Target Start/End: Complemental strand, 49239888 - 49239852
Alignment:
Q  596 tcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    |||||||||||||||||||||||||||| ||||||||    
T  49239888 tcgaaccccggacaccccacttattcatctttaaggt 49239852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 49251442 - 49251410
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    ||||||||||||||| |||||||||||||||||    
T  49251442 cggggttcgaaccccagacaccccacttattca 49251410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 585 - 617
Target Start/End: Original strand, 51942340 - 51942372
Alignment:
Q  585 aggggcggggttcgaaccccggacaccccactt 617  Q
    |||| ||||||||||||||||||||||||||||    
T  51942340 agggtcggggttcgaaccccggacaccccactt 51942372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 52961129 - 52961097
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    ||||||||||||||||||| |||||||||||||    
T  52961129 cggggttcgaaccccggacgccccacttattca 52961097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 549 - 631
Target Start/End: Complemental strand, 40407050 - 40406965
Alignment:
Q  549 tagctcatttggtaagggataatgtataagatacgtaggggc--ggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    |||||||||||||||||||||||| | || ||  | ||||||  ||||||||||||||||||||||||||||||||| ||||||||    
T  40407050 tagctcatttggtaagggataatgcacaatatgtgcaggggccgggggttcgaaccccggacaccccacttattcatctttaaggt 40406965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 549 - 621
Target Start/End: Original strand, 38690672 - 38690745
Alignment:
Q  549 tagctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttattc 621  Q
    ||||||| |||||||||||||||| |||  ||| | ||||| ||||||||||||||||||||||||||||||||    
T  38690672 tagctcacttggtaagggataatgcatattatatgcaggggtcggggttcgaaccccggacaccccacttattc 38690745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 549 - 631
Target Start/End: Original strand, 16556457 - 16556541
Alignment:
Q  549 tagctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    |||||||||||||||||||||||| | || ||  | ||||| |||||||||||||||| ||||||||||||||||| ||||||||    
T  16556457 tagctcatttggtaagggataatgcacaatatgtgcaggggtcggggttcgaaccccgaacaccccacttattcatctttaaggt 16556541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 549 - 631
Target Start/End: Complemental strand, 43362257 - 43362173
Alignment:
Q  549 tagctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    ||||||||||| |||||||||||| | || |||   ||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  43362257 tagctcatttgctaagggataatgcacaatatattcaggggtcggggttcgaaccccggacaccccacttattcatctttaaggt 43362173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 549 - 631
Target Start/End: Complemental strand, 48404226 - 48404142
Alignment:
Q  549 tagctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    ||||||||||| |||| |||||||||||| ||  ||||| | |||||||||||||||||||||| ||||||||||| ||||||||    
T  48404226 tagctcatttgataagagataatgtataatatgtgtaggtgtcggggttcgaaccccggacacctcacttattcatctttaaggt 48404142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 549 - 631
Target Start/End: Original strand, 23448979 - 23449062
Alignment:
Q  549 tagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattcattttaaggt 631  Q
    ||||| |||||||||||||||||| | || ||  | |||||  ||||||||||||||| |||||||||||||||||||||||||    
T  23448979 tagcttatttggtaagggataatgcacaatatgtgcaggggttggggttcgaaccccgaacaccccacttattcattttaaggt 23449062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 534 - 631
Target Start/End: Original strand, 46283113 - 46283212
Alignment:
Q  534 aagtccccgtgagtctagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    |||||||| ||||  || ||||||||||||||||||||| | || ||  | || ||| ||||||||||||||||||||||||||||||||| ||||||||    
T  46283113 aagtccccatgagcttacctcatttggtaagggataatgcacaatatgtgcagcggccggggttcgaaccccggacaccccacttattcatctttaaggt 46283212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 536 - 628
Target Start/End: Complemental strand, 27862933 - 27862840
Alignment:
Q  536 gtccccgtgagtctagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattcattttaa 628  Q
    |||||| ||||  ||||||||||| |||||||||||| | ||  |  | |||||| ||||||||||||||||||||||||||||||||| ||||    
T  27862933 gtccccatgagcttagctcatttgataagggataatgcacaatttgtgcaggggctggggttcgaaccccggacaccccacttattcatcttaa 27862840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 553 - 621
Target Start/End: Original strand, 34974712 - 34974780
Alignment:
Q  553 tcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattc 621  Q
    |||||||||||||||||||| ||  | || |||||||| |||||||||||||||||||||||||||||||    
T  34974712 tcatttggtaagggataatgcatttg-tatgtaggggctggggttcgaaccccggacaccccacttattc 34974780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 552 - 631
Target Start/End: Complemental strand, 45848012 - 45847931
Alignment:
Q  552 ctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    |||||||| |||||||||||| |||| ||  | ||||  |||||||||||||||||||||||||||||||||| ||||||||    
T  45848012 ctcatttgataagggataatgcataatatgtgcagggatcggggttcgaaccccggacaccccacttattcatctttaaggt 45847931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 590 - 628
Target Start/End: Complemental strand, 7768835 - 7768797
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  7768835 cggggttcgaaccccggacaccccacttattcactttaa 7768797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 590 - 628
Target Start/End: Original strand, 8690262 - 8690300
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  8690262 cggggttcgaaccccggacaccccacttattcactttaa 8690300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 590 - 628
Target Start/End: Original strand, 9693010 - 9693048
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  9693010 cggggttcgaaccccggacaccccacttattcactttaa 9693048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 590 - 628
Target Start/End: Original strand, 14149841 - 14149879
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  14149841 cggggttcgaaccccggacaccccacttattcactttaa 14149879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 553 - 626
Target Start/End: Complemental strand, 22096476 - 22096402
Alignment:
Q  553 tcatttggtaagggataatgtataagatacgtaggggcgg-ggttcgaaccccggacaccccacttattcatttt 626  Q
    |||||||||||||||||||| | || ||  | |||||| | ||||||||| ||||||||||||||||||||||||    
T  22096476 tcatttggtaagggataatgcacaatatgtgcaggggccgaggttcgaactccggacaccccacttattcatttt 22096402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 590 - 628
Target Start/End: Complemental strand, 28520778 - 28520740
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  28520778 cggggttcgaaccccggacaccccacttattcactttaa 28520740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 590 - 628
Target Start/End: Original strand, 36257742 - 36257780
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  36257742 cggggttcgaaccccggacaccccacttattcactttaa 36257780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 585 - 623
Target Start/End: Original strand, 37274623 - 37274661
Alignment:
Q  585 aggggcggggttcgaaccccggacaccccacttattcat 623  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  37274623 agggccggggttcgaaccccggacaccccacttattcat 37274661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 590 - 628
Target Start/End: Complemental strand, 48968257 - 48968219
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  48968257 cggggttcgaaccccggacaccccacttattcactttaa 48968219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 552 - 631
Target Start/End: Complemental strand, 45355803 - 45355723
Alignment:
Q  552 ctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    ||||||| ||||||||||||| | || ||  ||||||| |||||||||||||||||||| ||||||||||||| ||||||||    
T  45355803 ctcatttagtaagggataatgcacaatatgtgtaggggtcggggttcgaaccccggaca-cccacttattcatctttaaggt 45355723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 552 - 631
Target Start/End: Complemental strand, 45369544 - 45369464
Alignment:
Q  552 ctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    ||||||| ||||||||||||| | || ||  ||||||| |||||||||||||||||||| ||||||||||||| ||||||||    
T  45369544 ctcatttagtaagggataatgcacaatatgtgtaggggtcggggttcgaaccccggaca-cccacttattcatctttaaggt 45369464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 549 - 631
Target Start/End: Complemental strand, 11491308 - 11491224
Alignment:
Q  549 tagctcatttggtaagggataatgtataagatacgtaggggcggg-gttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    |||||||||||  ||||||||||| ||||  |  | |||||| || |||||||||||||||||||||||||||||| ||||||||    
T  11491308 tagctcatttgacaagggataatgcataatttgtgcaggggccggagttcgaaccccggacaccccacttattcatctttaaggt 11491224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 583 - 622
Target Start/End: Original strand, 29785190 - 29785230
Alignment:
Q  583 gtaggggc-ggggttcgaaccccggacaccccacttattca 622  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  29785190 gtaggggctggggttcgaaccccggacaccccacttattca 29785230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 47017993 - 47017961
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||||||    
T  47017993 cggggttcgaaccccggacaccccacttattca 47017961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 590 - 625
Target Start/End: Complemental strand, 13211399 - 13211364
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattt 625  Q
    ||||||||||||||||||||| ||||||||||||||    
T  13211399 cggggttcgaaccccggacactccacttattcattt 13211364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 556 - 622
Target Start/End: Original strand, 24570223 - 24570290
Alignment:
Q  556 tttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattca 622  Q
    ||||||||||||||||| | || ||| |||||||  ||||||||||||||| |||||| |||||||||    
T  24570223 tttggtaagggataatgcacaatatatgtaggggttggggttcgaaccccgaacaccctacttattca 24570290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 550 - 628
Target Start/End: Complemental strand, 41272066 - 41271987
Alignment:
Q  550 agctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||| ||||||||||||||||||| ||  || | ||||  | |||||||||| ||||||||||||||||||||| ||||    
T  41272066 agctcgtttggtaagggataatgtacaatttatgcagggttcagggttcgaactccggacaccccacttattcatcttaa 41271987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 591 - 622
Target Start/End: Complemental strand, 49039491 - 49039460
Alignment:
Q  591 ggggttcgaaccccggacaccccacttattca 622  Q
    ||||||||||||||||||||||||||||||||    
T  49039491 ggggttcgaaccccggacaccccacttattca 49039460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 591 - 622
Target Start/End: Original strand, 53815745 - 53815776
Alignment:
Q  591 ggggttcgaaccccggacaccccacttattca 622  Q
    ||||||||||||||||||||||||||||||||    
T  53815745 ggggttcgaaccccggacaccccacttattca 53815776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 592 - 622
Target Start/End: Complemental strand, 28221352 - 28221322
Alignment:
Q  592 gggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||||    
T  28221352 gggttcgaaccccggacaccccacttattca 28221322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 631
Target Start/End: Original strand, 29430545 - 29430587
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    ||||||||||||||||||||||| |||||||||| ||||||||    
T  29430545 cggggttcgaaccccggacaccctacttattcatctttaaggt 29430587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 593 - 627
Target Start/End: Complemental strand, 34773727 - 34773693
Alignment:
Q  593 ggttcgaaccccggacaccccacttattcatttta 627  Q
    |||||||||||||||||||||||||||||| ||||    
T  34773727 ggttcgaaccccggacaccccacttattcacttta 34773693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 628
Target Start/End: Original strand, 36954185 - 36954223
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  36954185 cggggttcgaaccccggacaccccatttattcactttaa 36954223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 631
Target Start/End: Complemental strand, 37889653 - 37889611
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca-ttttaaggt 631  Q
    |||||||||||||||||||||| |||||||||| |||||||||    
T  37889653 cggggttcgaaccccggacacctcacttattcacttttaaggt 37889611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 628
Target Start/End: Original strand, 40150521 - 40150559
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    |||||||||||||||||||||| |||||||||| |||||    
T  40150521 cggggttcgaaccccggacacctcacttattcactttaa 40150559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 620
Target Start/End: Complemental strand, 42411501 - 42411471
Alignment:
Q  590 cggggttcgaaccccggacaccccacttatt 620  Q
    |||||||||||||||||||||||||||||||    
T  42411501 cggggttcgaaccccggacaccccacttatt 42411471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 585 - 623
Target Start/End: Complemental strand, 45141285 - 45141247
Alignment:
Q  585 aggggcggggttcgaaccccggacaccccacttattcat 623  Q
    |||| |||||||||||||||||||||| |||||||||||    
T  45141285 agggtcggggttcgaaccccggacacctcacttattcat 45141247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 628
Target Start/End: Original strand, 50815755 - 50815793
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    |||||||||||||||||||||||||| ||||||| ||||    
T  50815755 cggggttcgaaccccggacaccccacatattcatcttaa 50815793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 628
Target Start/End: Original strand, 52031255 - 52031293
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||||||||| ||||||||||||||||| |||||    
T  52031255 cggggttcgaaccccagacaccccacttattcactttaa 52031293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 628
Target Start/End: Complemental strand, 52330956 - 52330918
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    |||||||||||| |||||||||||||||||||| |||||    
T  52330956 cggggttcgaactccggacaccccacttattcactttaa 52330918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 620
Target Start/End: Complemental strand, 53355013 - 53354983
Alignment:
Q  590 cggggttcgaaccccggacaccccacttatt 620  Q
    |||||||||||||||||||||||||||||||    
T  53355013 cggggttcgaaccccggacaccccacttatt 53354983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 620
Target Start/End: Complemental strand, 53698027 - 53697997
Alignment:
Q  590 cggggttcgaaccccggacaccccacttatt 620  Q
    |||||||||||||||||||||||||||||||    
T  53698027 cggggttcgaaccccggacaccccacttatt 53697997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 617
Target Start/End: Original strand, 8965092 - 8965172
Alignment:
Q  537 tccccgtgagtctagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccactt 617  Q
    ||||||||||  ||||||| |||||| |||||| || |||  ||| | |||||| |||||||||||||||||||||||||||    
T  8965092 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggggccggggttcgaaccccggacaccccactt 8965172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 590 - 623
Target Start/End: Original strand, 10098173 - 10098206
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcat 623  Q
    |||| |||||||||||||||||||||||||||||    
T  10098173 cgggattcgaaccccggacaccccacttattcat 10098206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 590 - 631
Target Start/End: Original strand, 21200578 - 21200619
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaaggt 631  Q
    |||||||||||| |||| ||||||||||||||| ||||||||    
T  21200578 cggggttcgaactccggtcaccccacttattcactttaaggt 21200619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 590 - 623
Target Start/End: Complemental strand, 24234121 - 24234088
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcat 623  Q
    ||||||| ||||||||||||||||||||||||||    
T  24234121 cggggtttgaaccccggacaccccacttattcat 24234088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 583 - 623
Target Start/End: Complemental strand, 29269370 - 29269329
Alignment:
Q  583 gtaggggcgggg-ttcgaaccccggacaccccacttattcat 623  Q
    |||||||| ||| |||||||||||||||||||||||||||||    
T  29269370 gtaggggctgggattcgaaccccggacaccccacttattcat 29269329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 591 - 628
Target Start/End: Original strand, 30616049 - 30616086
Alignment:
Q  591 ggggttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||| |||||||||||||||||||||| |||||    
T  30616049 ggggttcgagccccggacaccccacttattcactttaa 30616086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 593 - 622
Target Start/End: Original strand, 36576315 - 36576344
Alignment:
Q  593 ggttcgaaccccggacaccccacttattca 622  Q
    ||||||||||||||||||||||||||||||    
T  36576315 ggttcgaaccccggacaccccacttattca 36576344  T

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Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 585 - 618
Target Start/End: Original strand, 42395599 - 42395632
Alignment:
Q  585 aggggcggggttcgaaccccggacaccccactta 618  Q
    |||| |||||||||||||||||||||||||||||    
T  42395599 agggccggggttcgaaccccggacaccccactta 42395632  T

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Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 585 - 622
Target Start/End: Complemental strand, 42758216 - 42758179
Alignment:
Q  585 aggggcggggttcgaaccccggacaccccacttattca 622  Q
    |||||| |||||||||||| ||||||||||||||||||    
T  42758216 aggggccgggttcgaaccctggacaccccacttattca 42758179  T

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Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 536 - 620
Target Start/End: Original strand, 51974740 - 51974825
Alignment:
Q  536 gtccccgtgagtctagctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttatt 620  Q
    |||||| ||||  |||||||||||||||||||||||| | || ||  | ||||| |||| |||||||| |||||| ||||||||||    
T  51974740 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggtcgggattcgaacctcggacatcccacttatt 51974825  T

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Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 590 - 623
Target Start/End: Complemental strand, 55485873 - 55485840
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcat 623  Q
    ||||||||||||||| ||||||||||||||||||    
T  55485873 cggggttcgaaccccagacaccccacttattcat 55485840  T

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Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Original strand, 3442891 - 3442923
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    ||||||||||||||| |||||||||||||||||    
T  3442891 cggggttcgaaccccagacaccccacttattca 3442923  T

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Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 594 - 622
Target Start/End: Original strand, 3465635 - 3465663
Alignment:
Q  594 gttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||    
T  3465635 gttcgaaccccggacaccccacttattca 3465663  T

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Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 591 - 623
Target Start/End: Complemental strand, 6637768 - 6637736
Alignment:
Q  591 ggggttcgaaccccggacaccccacttattcat 623  Q
    ||||||||||||||| |||||||||||||||||    
T  6637768 ggggttcgaaccccgaacaccccacttattcat 6637736  T

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Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Original strand, 9924904 - 9924936
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    ||||||||||||||||||||| |||||||||||    
T  9924904 cggggttcgaaccccggacactccacttattca 9924936  T

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Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 594 - 622
Target Start/End: Complemental strand, 10757818 - 10757790
Alignment:
Q  594 gttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||    
T  10757818 gttcgaaccccggacaccccacttattca 10757790  T

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Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 594 - 622
Target Start/End: Complemental strand, 10970989 - 10970961
Alignment:
Q  594 gttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||    
T  10970989 gttcgaaccccggacaccccacttattca 10970961  T

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Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 594 - 622
Target Start/End: Original strand, 12856236 - 12856264
Alignment:
Q  594 gttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||    
T  12856236 gttcgaaccccggacaccccacttattca 12856264  T

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Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 13264293 - 13264261
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||| ||||    
T  13264293 cggggttcgaaccccggacaccccacttcttca 13264261  T

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Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 20753172 - 20753140
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||| ||||||||||    
T  20753172 cggggttcgaaccccggacaccacacttattca 20753140  T

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Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Original strand, 33076578 - 33076610
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    ||||||||||||||||||||||| |||||||||    
T  33076578 cggggttcgaaccccggacaccctacttattca 33076610  T

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Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Original strand, 36008323 - 36008355
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||| ||||||||||||||||    
T  36008323 cggggttcgaaccccgaacaccccacttattca 36008355  T

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Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 37032226 - 37032194
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||| ||||||||||||||||||||||||||||    
T  37032226 cgggattcgaaccccggacaccccacttattca 37032194  T

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Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 594 - 622
Target Start/End: Original strand, 45350328 - 45350356
Alignment:
Q  594 gttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||    
T  45350328 gttcgaaccccggacaccccacttattca 45350356  T

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Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 594 - 622
Target Start/End: Original strand, 45359807 - 45359835
Alignment:
Q  594 gttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||    
T  45359807 gttcgaaccccggacaccccacttattca 45359835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Original strand, 49319441 - 49319473
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||| ||||||||||||||||||||||||    
T  49319441 cggggttccaaccccggacaccccacttattca 49319473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 536 - 572
Target Start/End: Original strand, 49635425 - 49635461
Alignment:
Q  536 gtccccgtgagtctagctcatttggtaagggataatg 572  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  49635425 gtccccatgagtttagctcatttggtaagggataatg 49635461  T

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Target: chr3 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 552 - 631
Target Start/End: Original strand, 50381723 - 50381804
Alignment:
Q  552 ctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    ||||||||||||||||||||| | || ||| | ||||| ||||||||||| |||||||||||||||||||||| ||||||||    
T  50381723 ctcatttggtaagggataatgcacaatatatgcaggggtcggggttcgaatcccggacaccccacttattcatctttaaggt 50381804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 549 - 631
Target Start/End: Original strand, 47864642 - 47864726
Alignment:
Q  549 tagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    |||||||||||||||||||||||| | || ||  | |||||  ||||||||||||||||||||||||||||||||| ||||||||    
T  47864642 tagctcatttggtaagggataatgcacaatatgtgcaggggttggggttcgaaccccggacaccccacttattcatctttaaggt 47864726  T

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Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 536 - 622
Target Start/End: Original strand, 166781 - 166868
Alignment:
Q  536 gtccccgtgagtctagctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||  ||||||| |||||||||||||||| ||||  || | ||||| ||||||||||||||| |||||| ||||||||||    
T  166781 gtccccgtgagcttagctcacttggtaagggataatgcataatttatgcaggggccggggttcgaaccccagacacctcacttattca 166868  T

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Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 536 - 631
Target Start/End: Original strand, 11483606 - 11483703
Alignment:
Q  536 gtccccgtgagtctagctcatttggtaagggataatgtataagatacgtaggggcg-gggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    |||||| ||||  |||||||||||||||||||||||| | || ||  | ||||||  |||||||||| ||||||||||||||||||||| ||||||||    
T  11483606 gtccccatgagcttagctcatttggtaagggataatgcaaaatatgtgcaggggccagggttcgaactccggacaccccacttattcatctttaaggt 11483703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 552 - 631
Target Start/End: Original strand, 27471513 - 27471594
Alignment:
Q  552 ctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    ||||||||||||||||||||| |||| ||    |||||  ||||||||||||||||||||||||||||||||| ||||||||    
T  27471513 ctcatttggtaagggataatgcataatatgtacaggggttggggttcgaaccccggacaccccacttattcatctttaaggt 27471594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 535 - 623
Target Start/End: Original strand, 32421340 - 32421429
Alignment:
Q  535 agtccccgtgagtctagctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttattcat 623  Q
    ||||||| ||||  |||||||| ||||||||||||||| |||| ||| | ||||| ||||||||||||| || || ||||||||||||||    
T  32421340 agtccccatgagcttagctcatctggtaagggataatgcataatatatgcaggggtcggggttcgaacctcgaactccccacttattcat 32421429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 536 - 631
Target Start/End: Complemental strand, 33528307 - 33528210
Alignment:
Q  536 gtccccgtgagtctagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    |||||| ||||  |||||||||||||||||||||||| | ||  |  | |||||| |||||||||||||| |||||||||||||||||| ||||||||    
T  33528307 gtccccatgagcttagctcatttggtaagggataatgcacaatttgtgcaggggctggggttcgaaccccagacaccccacttattcatctttaaggt 33528210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 590 - 628
Target Start/End: Original strand, 3955356 - 3955394
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  3955356 cggggttcgaaccccggacaccccacttattcactttaa 3955394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 590 - 628
Target Start/End: Original strand, 9625031 - 9625069
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  9625031 cggggttcgaaccccggacaccccacttattcactttaa 9625069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 590 - 628
Target Start/End: Original strand, 10959181 - 10959219
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  10959181 cggggttcgaaccccggacaccccacttattcactttaa 10959219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 590 - 628
Target Start/End: Original strand, 24559437 - 24559475
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  24559437 cggggttcgaaccccggacaccccacttattcactttaa 24559475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 590 - 628
Target Start/End: Complemental strand, 27183728 - 27183690
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  27183728 cggggttcgaaccccggacaccccacttattcactttaa 27183690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 590 - 631
Target Start/End: Complemental strand, 29645874 - 29645832
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  29645874 cggggttcgaaccccggacaccccacttattcatctttaaggt 29645832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 590 - 628
Target Start/End: Complemental strand, 36331773 - 36331735
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  36331773 cggggttcgaaccccggacaccccacttattcactttaa 36331735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 550 - 623
Target Start/End: Complemental strand, 45583550 - 45583476
Alignment:
Q  550 agctcatttggtaagggataatgtataagatacgtaggggcg-gggttcgaaccccggacaccccacttattcat 623  Q
    ||||||||||||||||||||||| |||| |||  ||||||   ||||||||| ||| ||||||||||||||||||    
T  45583550 agctcatttggtaagggataatgcataatatatataggggttagggttcgaatcccagacaccccacttattcat 45583476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 590 - 627
Target Start/End: Original strand, 49146132 - 49146169
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcatttta 627  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  49146132 cggggttcgaaccccggacaccccacttattcacttta 49146169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 537 - 617
Target Start/End: Original strand, 53163592 - 53163672
Alignment:
Q  537 tccccgtgagtctagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccactt 617  Q
    ||||||||||  ||||||| |||||| |||||| || |||  ||| |||||||| |||||||||||||||||||||||||||    
T  53163592 tccccgtgagcttagctcagttggta-gggatattgcatattatatgtaggggccggggttcgaaccccggacaccccactt 53163672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 585 - 622
Target Start/End: Original strand, 53467991 - 53468028
Alignment:
Q  585 aggggcggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||| |||||||||||||||||||    
T  53467991 aggggcggggttcgaacctcggacaccccacttattca 53468028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 590 - 622
Target Start/End: Original strand, 24537875 - 24537907
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||||||    
T  24537875 cggggttcgaaccccggacaccccacttattca 24537907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 549 - 631
Target Start/End: Original strand, 29226332 - 29226416
Alignment:
Q  549 tagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    ||||||||||||||||||||||   | || ||  | |||||| ||||||||||||||| ||||||||||||||||| ||||||||    
T  29226332 tagctcatttggtaagggataacacacaatatgtgcaggggccggggttcgaaccccgtacaccccacttattcatctttaaggt 29226416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 549 - 631
Target Start/End: Original strand, 39739280 - 39739364
Alignment:
Q  549 tagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    |||||||||||||||||||||||| | || ||  | ||||   ||||||||||||||||||||| ||||||||||| ||||||||    
T  39739280 tagctcatttggtaagggataatgcacaatatgtgcagggattggggttcgaaccccggacacctcacttattcatctttaaggt 39739364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 535 - 622
Target Start/End: Original strand, 45431619 - 45431707
Alignment:
Q  535 agtccccgtgagtctagctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttattca 622  Q
    ||||||| ||||  ||||||| ||||||||||||||||  ||   || | ||||| | |||||||||||||||||||||||||||||||    
T  45431619 agtccccatgagcttagctcacttggtaagggataatgcgtattttatgcaggggtcagggttcgaaccccggacaccccacttattca 45431707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 46328971 - 46328939
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||||||    
T  46328971 cggggttcgaaccccggacaccccacttattca 46328939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 591 - 622
Target Start/End: Original strand, 2732712 - 2732743
Alignment:
Q  591 ggggttcgaaccccggacaccccacttattca 622  Q
    ||||||||||||||||||||||||||||||||    
T  2732712 ggggttcgaaccccggacaccccacttattca 2732743  T

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Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 591 - 622
Target Start/End: Original strand, 33206806 - 33206837
Alignment:
Q  591 ggggttcgaaccccggacaccccacttattca 622  Q
    ||||||||||||||||||||||||||||||||    
T  33206806 ggggttcgaaccccggacaccccacttattca 33206837  T

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Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 539 - 617
Target Start/End: Original strand, 39719935 - 39720013
Alignment:
Q  539 cccgtgagtctagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccactt 617  Q
    ||||||||| ||||||| |||||| |||||| || |||  ||| | |||||| |||||||||||||||||||||||||||    
T  39719935 cccgtgagtttagctcagttggta-gggatattgcatattatatgcaggggccggggttcgaaccccggacaccccactt 39720013  T

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Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 628
Target Start/End: Original strand, 3784118 - 3784156
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    |||||||||||||||||||||||||| | ||||||||||    
T  3784118 cggggttcgaaccccggacaccccaccttttcattttaa 3784156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 585 - 615
Target Start/End: Complemental strand, 4237004 - 4236974
Alignment:
Q  585 aggggcggggttcgaaccccggacaccccac 615  Q
    |||||||||||||||||||||||||||||||    
T  4237004 aggggcggggttcgaaccccggacaccccac 4236974  T

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Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 628
Target Start/End: Original strand, 14868733 - 14868771
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    |||||||||||||||| |||||||||||||||| |||||    
T  14868733 cggggttcgaaccccgaacaccccacttattcactttaa 14868771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 592 - 622
Target Start/End: Original strand, 27066660 - 27066690
Alignment:
Q  592 gggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||||    
T  27066660 gggttcgaaccccggacaccccacttattca 27066690  T

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Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 549 - 622
Target Start/End: Complemental strand, 37756502 - 37756428
Alignment:
Q  549 tagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattca 622  Q
    ||||||| ||| |||||||||||| ||||  || | |||||| ||||||||||||||  ||||||||||||||||    
T  37756502 tagctcacttgataagggataatgcataatttatgcaggggctggggttcgaaccccaaacaccccacttattca 37756428  T

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Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 552 - 629
Target Start/End: Complemental strand, 38869277 - 38869199
Alignment:
Q  552 ctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttattcattttaag 629  Q
    |||| |||||||||||||||| |||| | | | ||||| |||||||||||||||| |||| |||||||| || ||||||    
T  38869277 ctcacttggtaagggataatgcataatacatgcaggggtcggggttcgaaccccgaacacgccacttatccactttaag 38869199  T

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Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 537 - 610
Target Start/End: Original strand, 45871015 - 45871088
Alignment:
Q  537 tccccgtgagtctagctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacac 610  Q
    ||||||||||| ||||||| |||||| |||||| ||||||  ||| | ||||| |||||||||||||||||||||    
T  45871015 tccccgtgagtttagctcagttggta-gggatattgtatattatatgcaggggtcggggttcgaaccccggacac 45871088  T

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Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 535 - 631
Target Start/End: Original strand, 46798574 - 46798672
Alignment:
Q  535 agtccccgtgagtctagctcatttggtaagggataatgtataagatacgtaggggcgggg-ttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    ||||||| ||||  || |||||||||| |||||||||| | || ||  | |||||| ||| ||||||||| ||||||||||||||||||| ||||||||    
T  46798574 agtccccatgagcttaactcatttggtgagggataatgcacaatatgtgcaggggccgggattcgaaccctggacaccccacttattcatctttaaggt 46798672  T

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Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 592 - 622
Target Start/End: Original strand, 49429510 - 49429540
Alignment:
Q  592 gggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||||    
T  49429510 gggttcgaaccccggacaccccacttattca 49429540  T

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Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 628
Target Start/End: Original strand, 52030169 - 52030207
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  52030169 cggggttcgaaccccggacaccctacttattcactttaa 52030207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 591 - 620
Target Start/End: Complemental strand, 13540010 - 13539981
Alignment:
Q  591 ggggttcgaaccccggacaccccacttatt 620  Q
    ||||||||||||||||||||||||||||||    
T  13540010 ggggttcgaaccccggacaccccacttatt 13539981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 590 - 619
Target Start/End: Complemental strand, 24751307 - 24751278
Alignment:
Q  590 cggggttcgaaccccggacaccccacttat 619  Q
    ||||||||||||||||||||||||||||||    
T  24751307 cggggttcgaaccccggacaccccacttat 24751278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 590 - 623
Target Start/End: Complemental strand, 36727510 - 36727477
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcat 623  Q
    ||||||||||||| ||||||||||||||||||||    
T  36727510 cggggttcgaacctcggacaccccacttattcat 36727477  T

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Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 586 - 623
Target Start/End: Original strand, 45647350 - 45647387
Alignment:
Q  586 ggggcggggttcgaaccccggacaccccacttattcat 623  Q
    |||||||||||||||||||||||||| ||||| |||||    
T  45647350 ggggcggggttcgaaccccggacacctcacttcttcat 45647387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 590 - 627
Target Start/End: Complemental strand, 48347319 - 48347282
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcatttta 627  Q
    ||||||||||||| | ||||||||||||||||||||||    
T  48347319 cggggttcgaacctcagacaccccacttattcatttta 48347282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 11668316 - 11668284
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    ||||||||||||| |||||||||||||||||||    
T  11668316 cggggttcgaaccacggacaccccacttattca 11668284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 594 - 622
Target Start/End: Original strand, 14417920 - 14417948
Alignment:
Q  594 gttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||    
T  14417920 gttcgaaccccggacaccccacttattca 14417948  T

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Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 16006553 - 16006521
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    ||||||||||||||| |||||||||||||||||    
T  16006553 cggggttcgaaccccagacaccccacttattca 16006521  T

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Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Original strand, 24130607 - 24130639
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    ||||||| |||||||||||||||||||||||||    
T  24130607 cggggtttgaaccccggacaccccacttattca 24130639  T

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Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 596 - 628
Target Start/End: Complemental strand, 24136793 - 24136761
Alignment:
Q  596 tcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||||||||||||||||||||| |||||    
T  24136793 tcgaaccccggacaccccacttattcactttaa 24136761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 24160575 - 24160543
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    ||||||||||||||||||||| |||||||||||    
T  24160575 cggggttcgaaccccggacactccacttattca 24160543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 539 - 622
Target Start/End: Original strand, 31419579 - 31419663
Alignment:
Q  539 cccgtgagtctagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattca 622  Q
    ||||||||  || |||||||||||||||| || | | || ||  |||||||| ||||||||||||||  ||||||||||||||||    
T  31419579 cccgtgagcttaactcatttggtaagggacaacgcacaatatgtgtaggggctggggttcgaaccccaaacaccccacttattca 31419663  T

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Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 31902252 - 31902220
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||| ||||||||||||||||||||    
T  31902252 cggggttcgaactccggacaccccacttattca 31902220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Original strand, 32080103 - 32080135
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||| ||||||||||||||||    
T  32080103 cggggttcgaaccccgaacaccccacttattca 32080135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 32508841 - 32508809
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||| ||||||||||||||||    
T  32508841 cggggttcgaaccccgaacaccccacttattca 32508809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 591 - 623
Target Start/End: Complemental strand, 34407136 - 34407104
Alignment:
Q  591 ggggttcgaaccccggacaccccacttattcat 623  Q
    |||||||||||||| ||||||||||||||||||    
T  34407136 ggggttcgaaccccagacaccccacttattcat 34407104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Original strand, 35483317 - 35483349
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    ||||||||||| |||||||||||||||||||||    
T  35483317 cggggttcgaatcccggacaccccacttattca 35483349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Original strand, 43774233 - 43774265
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    ||||||||||||||| |||||||||||||||||    
T  43774233 cggggttcgaaccccagacaccccacttattca 43774265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Original strand, 49639076 - 49639108
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||| ||||||||||||||||    
T  49639076 cggggttcgaaccccgaacaccccacttattca 49639108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 50144653 - 50144621
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    ||||||||||||||||||||| |||||||||||    
T  50144653 cggggttcgaaccccggacactccacttattca 50144621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 543 - 622
Target Start/End: Complemental strand, 50676962 - 50676882
Alignment:
Q  543 tgagtctagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccacttattca 622  Q
    ||||| || |||| ||||||||||| |||  |||  ||| |||||||  ||||||||||||||| ||||||||||||||||    
T  50676962 tgagtttaactcacttggtaagggacaatacatattatatgtaggggttggggttcgaaccccgaacaccccacttattca 50676882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 54983752 - 54983720
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    ||||||||||||||||||||||||| |||||||    
T  54983752 cggggttcgaaccccggacaccccatttattca 54983720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.000000000001; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 535 - 616
Target Start/End: Original strand, 24202142 - 24202224
Alignment:
Q  535 agtccccgtgagtctagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccact 616  Q
    ||||||||||||  ||||||| |||||||||||||||| || |  || | |||||| ||||||||||||||||||||||||||    
T  24202142 agtccccgtgagcttagctcacttggtaagggataatgcattatgtatgcaggggccggggttcgaaccccggacaccccact 24202224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 557 - 631
Target Start/End: Complemental strand, 42678405 - 42678329
Alignment:
Q  557 ttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    |||||||||||||||| | || || |||||||  ||| |||||||||||||||||||||||||||||| ||||||||    
T  42678405 ttggtaagggataatgcacaatatgcgtagggatcggagttcgaaccccggacaccccacttattcatctttaaggt 42678329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 590 - 628
Target Start/End: Original strand, 29035024 - 29035062
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  29035024 cggggttcgaaccccggacaccccacttattcactttaa 29035062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 590 - 628
Target Start/End: Original strand, 34034398 - 34034436
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  34034398 cggggttcgaaccccggacaccccacttattcactttaa 34034436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 537 - 617
Target Start/End: Original strand, 4878207 - 4878287
Alignment:
Q  537 tccccgtgagtctagctcatttggtaagggataatgtataagatacgtaggggcg-gggttcgaaccccggacaccccactt 617  Q
    ||||||||||| ||||||| |||| | |||||| ||||||  ||| ||||||||  ||||||||||||||||||||||||||    
T  4878207 tccccgtgagtttagctcacttggca-gggatattgtatattatatgtaggggccagggttcgaaccccggacaccccactt 4878287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 590 - 623
Target Start/End: Original strand, 9796945 - 9796978
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcat 623  Q
    ||||||||||||||||||||||||||||||||||    
T  9796945 cggggttcgaaccccggacaccccacttattcat 9796978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 590 - 627
Target Start/End: Original strand, 36665478 - 36665515
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcatttta 627  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  36665478 cggggttcgaacctcggacaccccacttattcatttta 36665515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 580830 - 580798
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||||||    
T  580830 cggggttcgaaccccggacaccccacttattca 580798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 3037669 - 3037637
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||||||    
T  3037669 cggggttcgaaccccggacaccccacttattca 3037637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 8234839 - 8234807
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||||||    
T  8234839 cggggttcgaaccccggacaccccacttattca 8234807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 590 - 622
Target Start/End: Original strand, 11133124 - 11133156
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||||||    
T  11133124 cggggttcgaaccccggacaccccacttattca 11133156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 590 - 622
Target Start/End: Original strand, 17154697 - 17154729
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||||||    
T  17154697 cggggttcgaaccccggacaccccacttattca 17154729  T

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Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 549 - 620
Target Start/End: Original strand, 32084851 - 32084923
Alignment:
Q  549 tagctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttatt 620  Q
    ||||||||||||||||||| |||| |||  ||| ||||||| |||||||||||||||| ||| | ||||||||    
T  32084851 tagctcatttggtaagggacaatgcatattatatgtaggggccggggttcgaaccccgaacatctcacttatt 32084923  T

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Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 36520827 - 36520795
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||||||    
T  36520827 cggggttcgaaccccggacaccccacttattca 36520795  T

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Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 591 - 622
Target Start/End: Original strand, 1244618 - 1244649
Alignment:
Q  591 ggggttcgaaccccggacaccccacttattca 622  Q
    ||||||||||||||||||||||||||||||||    
T  1244618 ggggttcgaaccccggacaccccacttattca 1244649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 585 - 620
Target Start/End: Original strand, 9802935 - 9802970
Alignment:
Q  585 aggggcggggttcgaaccccggacaccccacttatt 620  Q
    |||| |||||||||||||||||||||||||||||||    
T  9802935 agggtcggggttcgaaccccggacaccccacttatt 9802970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 536 - 622
Target Start/End: Original strand, 23405193 - 23405279
Alignment:
Q  536 gtccccgtgagtctagctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||  ||||||| |||||| |||| | || |||| ||| | ||||| |||||||||||||| ||||||||||||||||||    
T  23405193 gtccccgtgagcttagctcagttggta-gggacattgcataatatatgcaggggtcggggttcgaaccctggacaccccacttattca 23405279  T

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Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 620
Target Start/End: Original strand, 2304338 - 2304368
Alignment:
Q  590 cggggttcgaaccccggacaccccacttatt 620  Q
    |||||||||||||||||||||||||||||||    
T  2304338 cggggttcgaaccccggacaccccacttatt 2304368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 594 - 631
Target Start/End: Complemental strand, 3330244 - 3330206
Alignment:
Q  594 gttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  3330244 gttcgaaccccggacaccccacttattcatctttaaggt 3330206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 624
Target Start/End: Complemental strand, 33116254 - 33116220
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcatt 624  Q
    ||||||||||||||||||||||| |||||||||||    
T  33116254 cggggttcgaaccccggacaccctacttattcatt 33116220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 549 - 626
Target Start/End: Complemental strand, 40203368 - 40203290
Alignment:
Q  549 tagctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttattcatttt 626  Q
    ||||||||| |||||||||||||||| || ||  ||| ||| | ||||| ||||||| || ||||||||||||||||||    
T  40203368 tagctcattcggtaagggataatgtacaatatgtgtaagggtcagggtttgaaccccagataccccacttattcatttt 40203290  T

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Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 628
Target Start/End: Original strand, 43871001 - 43871039
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  43871001 cggggttcgaatcccggacaccccacttattcactttaa 43871039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 628
Target Start/End: Original strand, 44187752 - 44187790
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||||||||| ||||||||||||||||| |||||    
T  44187752 cggggttcgaaccccagacaccccacttattcactttaa 44187790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 555 - 623
Target Start/End: Complemental strand, 17543173 - 17543104
Alignment:
Q  555 atttggtaagggataatgtataagatacgtaggggcggg-gttcgaaccccggacaccccacttattcat 623  Q
    |||||||||||||||||| | || ||  | |||||| || |||||||| |||||||||||||||||||||    
T  17543173 atttggtaagggataatgcacaatatgtgcaggggccggagttcgaacgccggacaccccacttattcat 17543104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 590 - 623
Target Start/End: Complemental strand, 20122522 - 20122489
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcat 623  Q
    ||||||||||||||||||||| ||||||||||||    
T  20122522 cggggttcgaaccccggacacgccacttattcat 20122489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 553 - 622
Target Start/End: Complemental strand, 22437297 - 22437228
Alignment:
Q  553 tcatttggtaagggataatgtataagatacgtaggggcggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||| ||||||| |||  ||| ||||||  ||||||||||| |||||||||  |||||||||    
T  22437297 tcatttggtaagtgataatgcatattatatgtagggttggggttcgaactccggacaccttacttattca 22437228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 617
Target Start/End: Complemental strand, 33229005 - 33228925
Alignment:
Q  537 tccccgtgagtctagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccactt 617  Q
    ||||||||||  ||||||| |||||| |||||| || |||  ||| | |||||| |||||||||||||||||||||||||||    
T  33229005 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggggccggggttcgaaccccggacaccccactt 33228925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 585 - 622
Target Start/End: Complemental strand, 33613657 - 33613620
Alignment:
Q  585 aggggcggggttcgaaccccggacaccccacttattca 622  Q
    |||| ||| |||||||||||||||||||||||||||||    
T  33613657 agggtcggagttcgaaccccggacaccccacttattca 33613620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 594 - 627
Target Start/End: Original strand, 44422159 - 44422192
Alignment:
Q  594 gttcgaaccccggacaccccacttattcatttta 627  Q
    ||||||||||||||||||||||||||||| ||||    
T  44422159 gttcgaaccccggacaccccacttattcacttta 44422192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Original strand, 1836636 - 1836668
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    ||||||||||||||||||||||| |||||||||    
T  1836636 cggggttcgaaccccggacaccctacttattca 1836668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 594 - 622
Target Start/End: Complemental strand, 4157692 - 4157664
Alignment:
Q  594 gttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||||||||||    
T  4157692 gttcgaaccccggacaccccacttattca 4157664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 585 - 617
Target Start/End: Original strand, 5613000 - 5613032
Alignment:
Q  585 aggggcggggttcgaaccccggacaccccactt 617  Q
    |||| ||||||||||||||||||||||||||||    
T  5613000 agggccggggttcgaaccccggacaccccactt 5613032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Original strand, 10262787 - 10262819
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    ||||||||||||||| |||||||||||||||||    
T  10262787 cggggttcgaaccccagacaccccacttattca 10262819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Original strand, 11837037 - 11837069
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||||||||| ||||||||||    
T  11837037 cggggttcgaaccccggacacctcacttattca 11837069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 583 - 622
Target Start/End: Complemental strand, 18386867 - 18386827
Alignment:
Q  583 gtaggggc-ggggttcgaaccccggacaccccacttattca 622  Q
    |||||||| ||||||||||| ||||||||||||||||||||    
T  18386867 gtaggggctggggttcgaactccggacaccccacttattca 18386827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 19905702 - 19905670
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    ||||||||||||||||||||||| |||||||||    
T  19905702 cggggttcgaaccccggacacccgacttattca 19905670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 25406697 - 25406665
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||| ||||||||||||||||||||    
T  25406697 cggggttcgaactccggacaccccacttattca 25406665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Original strand, 32288424 - 32288456
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    ||||||||||||| |||||||||||||||||||    
T  32288424 cggggttcgaacctcggacaccccacttattca 32288456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 595 - 623
Target Start/End: Original strand, 32891334 - 32891362
Alignment:
Q  595 ttcgaaccccggacaccccacttattcat 623  Q
    |||||||||||||||||||||||||||||    
T  32891334 ttcgaaccccggacaccccacttattcat 32891362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 549 - 631
Target Start/End: Complemental strand, 33065346 - 33065262
Alignment:
Q  549 tagctcatttggtaagggataatgtataagatacgtagggg-cggggttcgaaccccggacaccccacttattcat-tttaaggt 631  Q
    |||||||||||| ||||||||||| | ||  |  ||||||| |||||||||||| ||| |||||| |||||||||| ||||||||    
T  33065346 tagctcatttggcaagggataatgcacaatgtgtgtaggggtcggggttcgaactccgaacaccctacttattcatctttaaggt 33065262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Original strand, 37912477 - 37912509
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||| ||||||||||||||||||||||||    
T  37912477 cggggttcaaaccccggacaccccacttattca 37912509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 585 - 617
Target Start/End: Original strand, 41246432 - 41246464
Alignment:
Q  585 aggggcggggttcgaaccccggacaccccactt 617  Q
    |||| ||||||||||||||||||||||||||||    
T  41246432 agggccggggttcgaaccccggacaccccactt 41246464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Original strand, 41699150 - 41699182
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||| ||||||||||||||||    
T  41699150 cggggttcgaaccccgaacaccccacttattca 41699182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 585 - 628
Target Start/End: Complemental strand, 4858 - 4815
Alignment:
Q  585 aggggcggggttcgaaccccggacaccccacttattcattttaa 628  Q
    |||||||||||||||| ||||||||||||||||||||| |||||    
T  4858 aggggcggggttcgaatcccggacaccccacttattcactttaa 4815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 549 - 626
Target Start/End: Original strand, 22465 - 22543
Alignment:
Q  549 tagctcatttggtaagggataatgtataagatacgtaggggcgg-ggttcgaaccccggacaccccacttattcatttt 626  Q
    ||||||| |||||||||||||||  |||  ||| |||||||| | |||||||||||| |||| ||||||||||||||||    
T  22465 tagctcacttggtaagggataatacatattatatgtaggggctgaggttcgaaccccagacatcccacttattcatttt 22543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 591 - 624
Target Start/End: Original strand, 25075 - 25108
Alignment:
Q  591 ggggttcgaaccccggacaccccacttattcatt 624  Q
    ||||||||||||||||||||||||||||||||||    
T  25075 ggggttcgaaccccggacaccccacttattcatt 25108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 585 - 623
Target Start/End: Original strand, 5346 - 5384
Alignment:
Q  585 aggggcggggttcgaaccccggacaccccacttattcat 623  Q
    |||||| | ||||||||||||||||||||||||||||||    
T  5346 aggggccgtgttcgaaccccggacaccccacttattcat 5384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 628
Target Start/End: Original strand, 7124 - 7162
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcattttaa 628  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  7124 cggggttcgaaccccggacaccccatttattcactttaa 7162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 590 - 627
Target Start/End: Original strand, 4371 - 4408
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcatttta 627  Q
    ||||||||||||||||||||| ||||||||||| ||||    
T  4371 cggggttcgaaccccggacactccacttattcacttta 4408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 585 - 622
Target Start/End: Complemental strand, 22902 - 22865
Alignment:
Q  585 aggggcggggttcgaaccccggacaccccacttattca 622  Q
    |||||| |||||||||||| ||||||||||||||||||    
T  22902 aggggccgggttcgaaccctggacaccccacttattca 22865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 617
Target Start/End: Complemental strand, 10898 - 10818
Alignment:
Q  537 tccccgtgagtctagctcatttggtaagggataatgtataagatacgtaggggc-ggggttcgaaccccggacaccccactt 617  Q
    ||||||||||  ||||||| |||||| |||||| || |||  ||| | |||||| |||||||||||||||||||||||||||    
T  10898 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggggccggggttcgaaccccggacaccccactt 10818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 590 - 619
Target Start/End: Complemental strand, 236376 - 236347
Alignment:
Q  590 cggggttcgaaccccggacaccccacttat 619  Q
    ||||||||||||||||||||||||||||||    
T  236376 cggggttcgaaccccggacaccccacttat 236347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 590 - 623
Target Start/End: Complemental strand, 451422 - 451389
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattcat 623  Q
    |||||||||||| |||||||||||||||||||||    
T  451422 cggggttcgaactccggacaccccacttattcat 451389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Complemental strand, 6680 - 6648
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    ||||||||||||||||||||||||| |||||||    
T  6680 cggggttcgaaccccggacaccccaattattca 6648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 583 - 622
Target Start/End: Original strand, 1079 - 1119
Alignment:
Q  583 gtaggggc-ggggttcgaaccccggacaccccacttattca 622  Q
    |||||||| |||||||||||||| |||||||||||||||||    
T  1079 gtaggggctggggttcgaaccccagacaccccacttattca 1119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 622
Target Start/End: Original strand, 49868 - 49900
Alignment:
Q  590 cggggttcgaaccccggacaccccacttattca 622  Q
    |||||||||||||||| ||||||||||||||||    
T  49868 cggggttcgaaccccgtacaccccacttattca 49900  T

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