View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15523_high_45 (Length: 210)
Name: NF15523_high_45
Description: NF15523
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15523_high_45 |
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Alignment Details
Target: chr1 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 29828570 - 29828757
Alignment:
| Q |
1 |
aaaaactaacatacagattacaactgaatgaaaataagaaccttggaaacttgatgcccataaccacacaacatattcctccacatcagtaagtcacaaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29828570 |
aaaaactaacatacagattacaactgaatgaaaataagaaccttggaaacttgatgcccataaccacacaacatattcctccacatcagtaagtcacaaa |
29828669 |
T |
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| Q |
101 |
tgggcaaacttgcttgctatcaaccatgttttaataaaagagtannnnnnnnnnnnnggacaaaatatagaagagtattttgatttcgtaat |
192 |
Q |
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||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
29828670 |
tgggcaaacttgcg----atcaaccatgttttaataaaagagtatttttatttttttggacaaaatatagaagagtattttgatttcgtaat |
29828757 |
T |
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