View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15523_low_35 (Length: 334)

Name: NF15523_low_35
Description: NF15523
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15523_low_35
NF15523_low_35
[»] scaffold0160 (6 HSPs)
scaffold0160 (88-283)||(36013-36208)
scaffold0160 (143-283)||(36217-36356)
scaffold0160 (143-223)||(36365-36445)
scaffold0160 (17-86)||(36058-36132)
scaffold0160 (25-63)||(36363-36401)
scaffold0160 (25-86)||(36215-36281)
[»] chr2 (72 HSPs)
chr2 (87-283)||(1925603-1925799)
chr2 (114-283)||(35433099-35433268)
chr2 (102-283)||(27999614-27999795)
chr2 (102-283)||(28090348-28090529)
chr2 (102-283)||(28096671-28096852)
chr2 (102-251)||(13905701-13905850)
chr2 (102-251)||(13899803-13899952)
chr2 (102-251)||(26453338-26453487)
chr2 (102-251)||(40603174-40603323)
chr2 (163-283)||(40603325-40603445)
chr2 (168-283)||(13905858-13905973)
chr2 (148-283)||(32287405-32287540)
chr2 (168-281)||(26453495-26453608)
chr2 (154-267)||(19640906-19641019)
chr2 (154-267)||(19839499-19839612)
chr2 (154-267)||(26452895-26453008)
chr2 (154-267)||(36440077-36440190)
chr2 (90-267)||(1501726-1501903)
chr2 (160-272)||(32287278-32287390)
chr2 (88-267)||(979997-980176)
chr2 (154-267)||(180206-180319)
chr2 (154-267)||(980450-980563)
chr2 (154-267)||(2444119-2444232)
chr2 (154-267)||(13899096-13899209)
chr2 (159-267)||(42111642-42111750)
chr2 (154-261)||(5001100-5001207)
chr2 (154-261)||(5012770-5012877)
chr2 (154-267)||(14039713-14039826)
chr2 (154-267)||(19641068-19641181)
chr2 (154-267)||(19839661-19839774)
chr2 (154-267)||(40602731-40602844)
chr2 (154-267)||(21591158-21591271)
chr2 (159-272)||(32287013-32287126)
chr2 (93-242)||(204299-204448)
chr2 (181-267)||(980245-980331)
chr2 (150-223)||(35433010-35433083)
chr2 (143-223)||(1925514-1925594)
chr2 (185-272)||(32287143-32287230)
chr2 (154-220)||(2296976-2297042)
chr2 (154-220)||(25643737-25643803)
chr2 (154-220)||(13900052-13900121)
chr2 (17-63)||(1925707-1925753)
chr2 (154-220)||(6120837-6120903)
chr2 (17-86)||(13899834-13899908)
chr2 (108-180)||(35433287-35433359)
chr2 (102-165)||(27999854-27999917)
chr2 (102-165)||(28090588-28090651)
chr2 (102-165)||(28096911-28096974)
chr2 (114-164)||(1271964-1272014)
chr2 (181-219)||(2297061-2297099)
chr2 (181-219)||(6120922-6120960)
chr2 (17-86)||(13905732-13905806)
chr2 (181-219)||(25643822-25643860)
chr2 (17-86)||(26453369-26453443)
chr2 (17-63)||(27999718-27999764)
chr2 (17-63)||(28090452-28090498)
chr2 (17-63)||(28096775-28096821)
chr2 (17-63)||(35433203-35433249)
chr2 (17-86)||(40603205-40603279)
chr2 (181-219)||(13900140-13900178)
chr2 (25-86)||(35433026-35433092)
chr2 (25-63)||(1925558-1925596)
chr2 (181-219)||(13899345-13899383)
chr2 (181-219)||(13899479-13899517)
chr2 (181-219)||(13899613-13899651)
chr2 (181-219)||(14039962-14040000)
chr2 (181-219)||(26453144-26453182)
chr2 (181-219)||(40602980-40603018)
chr2 (38-86)||(26452895-26452948)
chr2 (154-191)||(26453290-26453327)
chr2 (154-191)||(40603126-40603163)
chr2 (31-86)||(32287404-32287464)
[»] chr5 (41 HSPs)
chr5 (102-283)||(20844892-20845073)
chr5 (88-283)||(20842236-20842431)
chr5 (102-283)||(20844648-20844829)
chr5 (102-251)||(23179435-23179584)
chr5 (102-251)||(23179244-23179393)
chr5 (143-279)||(20844442-20844578)
chr5 (168-283)||(32672852-32672967)
chr5 (168-283)||(23179592-23179707)
chr5 (154-267)||(12651292-12651405)
chr5 (143-264)||(20842440-20842561)
chr5 (154-267)||(23178415-23178528)
chr5 (154-267)||(23184344-23184457)
chr5 (154-267)||(34757338-34757451)
chr5 (154-267)||(39874172-39874285)
chr5 (143-266)||(20845082-20845205)
chr5 (160-267)||(23180082-23180189)
chr5 (154-267)||(23178673-23178786)
chr5 (161-267)||(32671996-32672102)
chr5 (154-263)||(10037189-10037298)
chr5 (161-251)||(32672754-32672844)
chr5 (154-220)||(3611844-3611910)
chr5 (154-220)||(20109130-20109196)
chr5 (154-220)||(20109898-20109964)
chr5 (161-218)||(30094369-30094426)
chr5 (17-86)||(23179275-23179349)
chr5 (17-86)||(23179466-23179540)
chr5 (181-219)||(3611787-3611825)
chr5 (17-86)||(20842281-20842355)
chr5 (17-63)||(20844923-20844969)
chr5 (184-219)||(30094310-30094345)
chr5 (181-219)||(20109073-20109111)
chr5 (181-219)||(20109708-20109746)
chr5 (181-219)||(20109841-20109879)
chr5 (25-86)||(20844440-20844506)
chr5 (17-86)||(20844679-20844753)
chr5 (25-63)||(20845080-20845118)
chr5 (181-219)||(23178922-23178960)
chr5 (181-219)||(23179056-23179094)
chr5 (181-219)||(32672238-32672276)
chr5 (181-219)||(32672506-32672544)
chr5 (181-219)||(32672640-32672678)
[»] chr1 (50 HSPs)
chr1 (89-283)||(45507363-45507557)
chr1 (89-251)||(35598148-35598310)
chr1 (143-283)||(45507214-45507354)
chr1 (102-251)||(39514199-39514348)
chr1 (102-251)||(2052057-2052206)
chr1 (88-232)||(35597733-35597876)
chr1 (168-283)||(2051934-2052049)
chr1 (154-267)||(22194875-22194988)
chr1 (154-263)||(36455222-36455331)
chr1 (154-267)||(48958565-48958678)
chr1 (159-267)||(15689392-15689500)
chr1 (159-263)||(48647756-48647860)
chr1 (154-267)||(2585415-2585528)
chr1 (154-267)||(7476024-7476137)
chr1 (154-267)||(7476585-7476698)
chr1 (154-267)||(9530051-9530164)
chr1 (154-267)||(42492470-42492583)
chr1 (154-267)||(45507049-45507162)
chr1 (154-263)||(50704586-50704695)
chr1 (90-267)||(13929107-13929284)
chr1 (154-258)||(22195045-22195149)
chr1 (161-267)||(15689232-15689338)
chr1 (168-282)||(35598026-35598140)
chr1 (154-267)||(2052536-2052649)
chr1 (154-260)||(49791595-49791701)
chr1 (168-283)||(35597648-35597762)
chr1 (154-260)||(49791871-49791977)
chr1 (168-223)||(39514136-39514191)
chr1 (154-220)||(2051777-2051843)
chr1 (154-220)||(36871037-36871103)
chr1 (102-182)||(38211808-38211888)
chr1 (17-86)||(35597757-35597831)
chr1 (17-86)||(35598192-35598266)
chr1 (17-86)||(39514243-39514317)
chr1 (154-220)||(49791079-49791145)
chr1 (154-220)||(49791456-49791522)
chr1 (17-86)||(2052101-2052175)
chr1 (25-86)||(45507290-45507356)
chr1 (181-219)||(49791022-49791060)
chr1 (181-219)||(49791399-49791437)
chr1 (17-63)||(38211811-38211857)
chr1 (181-219)||(2051720-2051758)
chr1 (181-219)||(2052362-2052400)
chr1 (181-219)||(13929067-13929105)
chr1 (148-190)||(26209959-26210001)
chr1 (181-219)||(36870980-36871018)
chr1 (181-219)||(50704835-50704873)
chr1 (154-191)||(2052217-2052254)
chr1 (154-198)||(49791754-49791798)
chr1 (154-198)||(49792030-49792074)
[»] chr6 (12 HSPs)
chr6 (102-283)||(3589194-3589375)
chr6 (159-267)||(29371660-29371768)
chr6 (154-261)||(2271852-2271959)
chr6 (154-267)||(33049694-33049807)
chr6 (161-267)||(24456436-24456542)
chr6 (161-267)||(29374212-29374318)
chr6 (154-263)||(33007263-33007371)
chr6 (154-220)||(29921026-29921092)
chr6 (17-63)||(3589225-3589271)
chr6 (181-219)||(2277454-2277492)
chr6 (181-219)||(29921111-29921149)
chr6 (181-219)||(33007085-33007123)
[»] chr4 (48 HSPs)
chr4 (102-251)||(41862204-41862353)
chr4 (102-251)||(22673737-22673886)
chr4 (102-251)||(41946721-41946872)
chr4 (102-251)||(52680163-52680312)
chr4 (168-283)||(41861899-41862014)
chr4 (168-283)||(52680320-52680435)
chr4 (154-267)||(35756423-35756536)
chr4 (154-267)||(42345238-42345351)
chr4 (154-263)||(16905836-16905945)
chr4 (154-267)||(29363491-29363604)
chr4 (159-263)||(21380325-21380429)
chr4 (154-257)||(29363708-29363811)
chr4 (154-263)||(28380258-28380367)
chr4 (154-267)||(52679741-52679854)
chr4 (154-257)||(29363829-29363932)
chr4 (154-257)||(42345117-42345220)
chr4 (154-267)||(30390792-30390905)
chr4 (130-251)||(41862395-41862516)
chr4 (154-267)||(41863128-41863241)
chr4 (154-267)||(53285763-53285876)
chr4 (168-251)||(41862022-41862105)
chr4 (168-251)||(41862113-41862196)
chr4 (161-246)||(53285650-53285735)
chr4 (171-267)||(22673311-22673407)
chr4 (168-251)||(41946630-41946713)
chr4 (168-242)||(22673896-22673970)
chr4 (185-283)||(41946448-41946546)
chr4 (168-244)||(41946546-41946622)
chr4 (154-220)||(14148570-14148636)
chr4 (154-220)||(14148424-14148490)
chr4 (154-220)||(19518506-19518572)
chr4 (154-220)||(21585322-21585388)
chr4 (17-86)||(22673768-22673842)
chr4 (154-220)||(25819683-25819749)
chr4 (17-86)||(41862248-41862322)
chr4 (181-219)||(14148513-14148551)
chr4 (181-219)||(19518449-19518487)
chr4 (181-219)||(21585265-21585303)
chr4 (181-219)||(25819768-25819806)
chr4 (17-63)||(41946795-41946841)
chr4 (17-86)||(52680194-52680268)
chr4 (181-219)||(16906085-16906123)
chr4 (181-219)||(22673543-22673581)
chr4 (17-63)||(41862467-41862513)
chr4 (181-219)||(41862820-41862858)
chr4 (154-191)||(22673689-22673726)
chr4 (181-214)||(28380507-28380540)
chr4 (154-195)||(29363649-29363690)
[»] chr3 (73 HSPs)
chr3 (102-251)||(18199247-18199396)
chr3 (102-251)||(36093956-36094105)
chr3 (102-251)||(36094147-36094296)
chr3 (102-251)||(26943598-26943747)
chr3 (148-274)||(6953260-6953386)
chr3 (116-257)||(18256760-18256901)
chr3 (143-267)||(855061-855185)
chr3 (90-272)||(6953783-6953963)
chr3 (148-272)||(36947835-36947959)
chr3 (168-283)||(36093833-36093948)
chr3 (154-267)||(35713141-35713254)
chr3 (154-267)||(47724552-47724665)
chr3 (148-272)||(6953401-6953525)
chr3 (154-267)||(49565969-49566082)
chr3 (148-272)||(6953644-6953768)
chr3 (159-263)||(31483606-31483710)
chr3 (148-264)||(36947704-36947820)
chr3 (168-272)||(36947974-36948078)
chr3 (168-283)||(18199404-18199519)
chr3 (168-283)||(26949100-26949215)
chr3 (154-267)||(1883317-1883430)
chr3 (154-267)||(11823954-11824067)
chr3 (154-267)||(26943936-26944049)
chr3 (186-283)||(854955-855052)
chr3 (154-267)||(36094888-36095001)
chr3 (145-257)||(18199127-18199239)
chr3 (161-263)||(43509680-43509782)
chr3 (154-267)||(26943025-26943138)
chr3 (154-267)||(33006031-33006143)
chr3 (154-267)||(35860506-35860619)
chr3 (154-267)||(36090982-36091095)
chr3 (154-267)||(36095103-36095216)
chr3 (148-260)||(36947569-36947681)
chr3 (90-233)||(52419531-52419673)
chr3 (154-267)||(851252-851365)
chr3 (185-272)||(6953540-6953627)
chr3 (168-267)||(38662117-38662216)
chr3 (102-186)||(26943789-26943873)
chr3 (102-183)||(851117-851198)
chr3 (154-242)||(38662177-38662264)
chr3 (154-215)||(18256681-18256742)
chr3 (154-220)||(13458625-13458691)
chr3 (154-220)||(17657175-17657241)
chr3 (186-251)||(26949027-26949092)
chr3 (154-220)||(4585533-4585599)
chr3 (159-220)||(12257888-12257949)
chr3 (161-218)||(16647460-16647517)
chr3 (17-63)||(851148-851194)
chr3 (17-86)||(18199278-18199352)
chr3 (17-86)||(36094000-36094074)
chr3 (17-86)||(36094191-36094265)
chr3 (181-219)||(4585618-4585656)
chr3 (181-219)||(12257968-12258006)
chr3 (181-219)||(13458568-13458606)
chr3 (17-86)||(18256810-18256884)
chr3 (17-63)||(26943820-26943866)
chr3 (184-219)||(16647541-16647576)
chr3 (25-86)||(855059-855125)
chr3 (17-63)||(26943629-26943675)
chr3 (181-215)||(17657260-17657294)
chr3 (181-219)||(26943274-26943312)
chr3 (181-219)||(26943408-26943446)
chr3 (181-219)||(31483850-31483888)
chr3 (181-219)||(36094580-36094618)
chr3 (181-219)||(36094714-36094752)
chr3 (17-63)||(52419585-52419630)
chr3 (38-86)||(49566029-49566082)
chr3 (31-86)||(6953327-6953387)
chr3 (31-86)||(6953709-6953769)
chr3 (31-86)||(6953848-6953907)
chr3 (31-63)||(36947650-36947682)
chr3 (31-63)||(36947789-36947821)
chr3 (31-63)||(36947928-36947960)
[»] chr7 (46 HSPs)
chr7 (102-251)||(22004409-22004558)
chr7 (102-251)||(22004218-22004367)
chr7 (102-249)||(7891186-7891333)
chr7 (102-283)||(13927069-13927242)
chr7 (151-283)||(3061545-3061677)
chr7 (168-283)||(22004566-22004681)
chr7 (90-279)||(29954187-29954375)
chr7 (168-283)||(7891343-7891458)
chr7 (154-267)||(13400667-13400780)
chr7 (143-267)||(13927378-13927500)
chr7 (154-267)||(5091034-5091147)
chr7 (154-267)||(7890743-7890856)
chr7 (154-263)||(20959367-20959476)
chr7 (154-263)||(45112713-45112822)
chr7 (159-260)||(3600132-3600233)
chr7 (154-267)||(7884939-7885052)
chr7 (154-267)||(22003511-22003624)
chr7 (154-267)||(32656790-32656903)
chr7 (148-272)||(31097951-31098075)
chr7 (161-246)||(5090921-5091006)
chr7 (185-283)||(13927271-13927369)
chr7 (93-248)||(32656629-32656784)
chr7 (159-229)||(7889201-7889271)
chr7 (129-210)||(3600053-3600132)
chr7 (90-216)||(26161861-26161987)
chr7 (154-220)||(27712699-27712765)
chr7 (154-219)||(32035234-32035299)
chr7 (17-86)||(13927100-13927173)
chr7 (154-220)||(16719033-16719099)
chr7 (154-220)||(17693243-17693309)
chr7 (17-86)||(22004249-22004323)
chr7 (17-86)||(7891217-7891291)
chr7 (181-219)||(16719118-16719156)
chr7 (181-219)||(17693328-17693366)
chr7 (17-86)||(22004440-22004514)
chr7 (181-219)||(27712784-27712822)
chr7 (213-267)||(26162195-26162249)
chr7 (17-86)||(3600056-3600128)
chr7 (181-219)||(7890992-7891030)
chr7 (181-219)||(22003760-22003798)
chr7 (181-219)||(22003894-22003932)
chr7 (181-219)||(22004028-22004066)
chr7 (181-219)||(45112962-45113000)
chr7 (38-86)||(7890743-7890796)
chr7 (154-191)||(7891138-7891175)
chr7 (31-63)||(29954243-29954275)
[»] scaffold0121 (6 HSPs)
scaffold0121 (102-251)||(41135-41284)
scaffold0121 (168-283)||(41383-41498)
scaffold0121 (154-267)||(40825-40938)
scaffold0121 (168-251)||(41292-41375)
scaffold0121 (17-86)||(41166-41240)
scaffold0121 (181-219)||(40940-40978)
[»] chr8 (15 HSPs)
chr8 (161-267)||(22732183-22732289)
chr8 (154-267)||(18489931-18490044)
chr8 (154-263)||(19958069-19958178)
chr8 (154-267)||(21637062-21637175)
chr8 (154-263)||(37985423-37985532)
chr8 (154-262)||(24014094-24014202)
chr8 (161-267)||(24011185-24011291)
chr8 (178-267)||(41377785-41377874)
chr8 (148-283)||(18489718-18489863)
chr8 (154-219)||(18278552-18278617)
chr8 (154-220)||(410098-410164)
chr8 (181-219)||(410041-410079)
chr8 (154-202)||(37985586-37985634)
chr8 (181-219)||(19958318-19958356)
chr8 (31-86)||(18489804-18489864)
[»] scaffold1113 (1 HSPs)
scaffold1113 (145-267)||(2451-2573)
[»] scaffold0097 (1 HSPs)
scaffold0097 (154-267)||(44607-44720)
[»] scaffold0642 (2 HSPs)
scaffold0642 (154-220)||(303-369)
scaffold0642 (181-219)||(388-426)
[»] scaffold0374 (2 HSPs)
scaffold0374 (154-220)||(107-173)
scaffold0374 (181-219)||(50-88)
[»] scaffold0345 (2 HSPs)
scaffold0345 (154-220)||(10214-10280)
scaffold0345 (181-219)||(10299-10337)
[»] scaffold0105 (2 HSPs)
scaffold0105 (154-220)||(28700-28766)
scaffold0105 (181-219)||(28643-28681)
[»] scaffold0119 (2 HSPs)
scaffold0119 (114-164)||(29223-29273)
scaffold0119 (114-164)||(35476-35526)


Alignment Details
Target: scaffold0160 (Bit Score: 152; Significance: 2e-80; HSPs: 6)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 88 - 283
Target Start/End: Original strand, 36013 - 36208
Alignment:
Q  88 aaatctcttattcctaaacctaacattgttgccctaattccacctaatatttaagctaagaaattgtagctacttttccatccttcaaaacctaaccata 187  Q
    |||||| |||||  ||||||||||| |||||||||||||||||||||||||||| |||| |||||||||| |||||||| ||||||||||||||||||||    
T  36013 aaatcttttatttataaacctaacactgttgccctaattccacctaatatttaacctaaaaaattgtagccacttttccctccttcaaaacctaaccata 36112  T
Q  188 tttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattgatttccatcttttcttttgccata 283  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  36113 tttcctaattcccatcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacctacttaattgatttccatcttttcttttgccata 36208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 143 - 283
Target Start/End: Original strand, 36217 - 36356
Alignment:
Q  143 ctaagaaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcc 242  Q
    |||| |||||||| | |||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  36217 ctaaaaaattgtacccacttttccctcctttaaaacctaaccatatttcctaattcccctcctccaaacc-taaccatgatttcctaatttccctcctcc 36315  T
Q  243 taaaacctacctaattgatttccatcttttcttttgccata 283  Q
    ||||||||||||||||||||| ||| |||||||||||||||    
T  36316 taaaacctacctaattgattttcatattttcttttgccata 36356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 143 - 223
Target Start/End: Original strand, 36365 - 36445
Alignment:
Q  143 ctaagaaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgat 223  Q
    |||| |||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  36365 ctaaaaaattgtagccacttttccctccttcaaaacctaaccatatatcctaattcccctcctccaaaccctaaccatgat 36445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 36058 - 36132
Alignment:
Q  17 aatatttaacctaaaaaattgtagctacttttccctccttcaaaacc-----atatttcctaatttccctcctcc 86  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||     ||||||||||||| || ||||||    
T  36058 aatatttaacctaaaaaattgtagccacttttccctccttcaaaacctaaccatatttcctaattcccatcctcc 36132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 36363 - 36401
Alignment:
Q  25 acctaaaaaattgtagctacttttccctccttcaaaacc 63  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  36363 acctaaaaaattgtagccacttttccctccttcaaaacc 36401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 36215 - 36281
Alignment:
Q  25 acctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 86  Q
    ||||||||||||||| | |||||||||||||| ||     ||||||||||||||||| |||||||||    
T  36215 acctaaaaaattgtacccacttttccctcctttaaaacctaaccatatttcctaattcccctcctcc 36281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 145; Significance: 3e-76; HSPs: 72)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 87 - 283
Target Start/End: Complemental strand, 1925799 - 1925603
Alignment:
Q  87 taaatctcttattcctaaacctaacattgttgccctaattccacctaatatttaagctaagaaattgtagctacttttccatccttcaaaacctaaccat 186  Q
    ||||||| |||||  ||||||||||| |||||||||||||||||||||||||||| |||| ||||||||| ||||||||| |||||||||||||||||||    
T  1925799 taaatcttttatttataaacctaacactgttgccctaattccacctaatatttaacctaaaaaattgtagatacttttccctccttcaaaacctaaccat 1925700  T
Q  187 atttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattgatttccatcttttcttttgccata 283  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||    
T  1925699 atttcataattcccctcctccaaaccctaaccattatttcctaatttccctcctcctaaaacctacctaattgatttccatattttctttttccata 1925603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 114 - 283
Target Start/End: Complemental strand, 35433268 - 35433099
Alignment:
Q  114 tgttgccctaattccacctaatatttaagctaagaaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccc 213  Q
    |||||||||||||||||||||||||||| |||| || ||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  35433268 tgttgccctaattccacctaatatttaacctaaaaagttgtagccacttttccctccttcaaaacctaaccatatttcttaattcccctcctccaaaccc 35433169  T
Q  214 taaccatgatttcctaatttctctcctcctaaaacctacctaattgatttccatcttttcttttgccata 283  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||    
T  35433168 taaccatgatttcctaatttccctcctcctaaaacctacctaattgattttcatattttcttttgccata 35433099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 102 - 283
Target Start/End: Complemental strand, 27999795 - 27999614
Alignment:
Q  102 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccc 201  Q
    |||||||||||  ||||||||||||||||||||||||||| |||| |||||||||| |||||||| ||||||| |||||||||||||||| | |||||||    
T  27999795 taaacctaacaccgttgccctaattccacctaatatttaacctaaaaaattgtagccacttttccctccttcataacctaaccatatttcatgattcccc 27999696  T
Q  202 tcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattgatttccatcttttcttttgccata 283  Q
    ||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||    
T  27999695 tcctccaaaccctaatcatgatttcctaatttccctcatcctaaaacctacctaattgatttccatattttcttttgccata 27999614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 102 - 283
Target Start/End: Complemental strand, 28090529 - 28090348
Alignment:
Q  102 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccc 201  Q
    |||||||||||  ||||||||||||||||||||||||||| |||| |||||||||| |||||||| ||||||| |||||||||||||||| | |||||||    
T  28090529 taaacctaacaccgttgccctaattccacctaatatttaacctaaaaaattgtagccacttttccctccttcataacctaaccatatttcatgattcccc 28090430  T
Q  202 tcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattgatttccatcttttcttttgccata 283  Q
    ||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||    
T  28090429 tcctccaaaccctaatcatgatttcctaatttccctcatcctaaaacctacctaattgatttccatattttcttttgccata 28090348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 102 - 283
Target Start/End: Complemental strand, 28096852 - 28096671
Alignment:
Q  102 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccc 201  Q
    |||||||||||  ||||||||||||||||||||||||||| |||| |||||||||| |||||||| ||||||| |||||||||||||||| | |||||||    
T  28096852 taaacctaacaccgttgccctaattccacctaatatttaacctaaaaaattgtagccacttttccctccttcataacctaaccatatttcatgattcccc 28096753  T
Q  202 tcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattgatttccatcttttcttttgccata 283  Q
    ||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||    
T  28096752 tcctccaaaccctaatcatgatttcctaatttccctcatcctaaaacctacctaattgatttccatattttcttttgccata 28096671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 102 - 251
Target Start/End: Original strand, 13905701 - 13905850
Alignment:
Q  102 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccc 201  Q
    |||||||||||||||||||||||||||||||||||||||| | || ||||| |||| |||||||| ||||||||||||||||||||||||||||||||||    
T  13905701 taaacctaacattgttgccctaattccacctaatatttaacccaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattcccc 13905800  T
Q  202 tcctccaaaccctaaccatgatttcctaatttctctcctcctaaaaccta 251  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  13905801 tcctccaaaccctaaccatgatttcctaatttccctcctcctaaaaccta 13905850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 102 - 251
Target Start/End: Original strand, 13899803 - 13899952
Alignment:
Q  102 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccc 201  Q
    |||||||||||||||||||||||||||||| ||||||||| |||| ||||| |||| |||||||| |||||||||||||||||||||||||||||| |||    
T  13899803 taaacctaacattgttgccctaattccaccgaatatttaacctaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattaccc 13899902  T
Q  202 tcctccaaaccctaaccatgatttcctaatttctctcctcctaaaaccta 251  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  13899903 tcctccaaaccctaaccatgatttcctaatttccctcctcctaaaaccta 13899952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 102 - 251
Target Start/End: Original strand, 26453338 - 26453487
Alignment:
Q  102 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccc 201  Q
    |||||||||||||||||||||||||||| ||||||||||| |||| ||||| |||| |||||||  ||||||||||||||||||||||||||||||||||    
T  26453338 taaacctaacattgttgccctaattccaactaatatttaacctaaaaaattatagccacttttctctccttcaaaacctaaccatatttcctaattcccc 26453437  T
Q  202 tcctccaaaccctaaccatgatttcctaatttctctcctcctaaaaccta 251  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  26453438 tcctccaaaccctaaccatgatttcctaatttccctcctcttaaaaccta 26453487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 102 - 251
Target Start/End: Original strand, 40603174 - 40603323
Alignment:
Q  102 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccc 201  Q
    |||||||||||||||||||||||||||| ||||||||||| |||| ||||| |||| |||||||  ||||||||||||||||||||||||||||||||||    
T  40603174 taaacctaacattgttgccctaattccaactaatatttaacctaaaaaattatagccacttttctctccttcaaaacctaaccatatttcctaattcccc 40603273  T
Q  202 tcctccaaaccctaaccatgatttcctaatttctctcctcctaaaaccta 251  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  40603274 tcctccaaaccctaaccatgatttcctaatttccctcctcttaaaaccta 40603323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 163 - 283
Target Start/End: Original strand, 40603325 - 40603445
Alignment:
Q  163 ttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattgatt 262  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  40603325 ttccctcctttaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacctatctaattgatt 40603424  T
Q  263 tccatcttttcttttgccata 283  Q
    ||||| |||||| ||||||||    
T  40603425 tccatattttctgttgccata 40603445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 168 - 283
Target Start/End: Original strand, 13905858 - 13905973
Alignment:
Q  168 tccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattgatttccat 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||    
T  13905858 tccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatcatttcctaatttccctcctcctaaaacctatctaattgatttccat 13905957  T
Q  268 cttttcttttgccata 283  Q
     |||||| ||||||||    
T  13905958 attttctgttgccata 13905973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 148 - 283
Target Start/End: Original strand, 32287405 - 32287540
Alignment:
Q  148 aaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaa 247  Q
    |||||||| | |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  32287405 aaattgtaaccacttttccctccttcaaaacctaatcatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa 32287504  T
Q  248 cctacctaattgatttccatcttttcttttgccata 283  Q
    | || ||||||||||||||| |||||| ||||||||    
T  32287505 cttatctaattgatttccatattttctgttgccata 32287540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 26453495 - 26453608
Alignment:
Q  168 tccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattgatttccat 267  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  26453495 tcctttaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacctatctaattgatttccat 26453594  T
Q  268 cttttcttttgcca 281  Q
     |||||| ||||||    
T  26453595 attttctgttgcca 26453608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 19640906 - 19641019
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |    
T  19640906 tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatc 19641005  T
Q  254 taattgatttccat 267  Q
    ||||||| ||||||    
T  19641006 taattgaattccat 19641019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 19839499 - 19839612
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |    
T  19839499 tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatc 19839598  T
Q  254 taattgatttccat 267  Q
    ||||||| ||||||    
T  19839599 taattgaattccat 19839612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 26452895 - 26453008
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||| |    
T  26452895 tagcaacttttccctccttcaaaacctaaccatatttcctaatttccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatc 26452994  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  26452995 taattgatttccat 26453008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 154 - 267
Target Start/End: Complemental strand, 36440190 - 36440077
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |    
T  36440190 tagcaacttttccctccttcaaaacctaactatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatc 36440091  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  36440090 taattgatttccat 36440077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 90 - 267
Target Start/End: Original strand, 1501726 - 1501903
Alignment:
Q  90 atctcttattcctaaacctaacattgttgccctaattcca-cctaatattt-aagctaagaaattgtagctacttttccatccttcaaaacctaaccata 187  Q
    |||||||||||||||||  | | ||||||||||||||  | |||||||||| || |||| |  || |||| |||||||| ||||||||||||||||||||    
T  1501726 atctcttattcctaaacaaagctttgttgccctaattttaacctaatattttaacctaata--ttttagcaacttttccctccttcaaaacctaaccata 1501823  T
Q  188 tttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattgatttccat 267  Q
    |||||||||||||||||||||||||||||| ||||||| |||| ||| |||||||||||||||| |||||||||||||||    
T  1501824 tttcctaattcccctcctccaaaccctaacaatgattttctaacttcactcctcctaaaacctatctaattgatttccat 1501903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 160 - 272
Target Start/End: Original strand, 32287278 - 32287390
Alignment:
Q  160 cttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattg 259  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||    
T  32287278 cttttccctccttcaaaacctaactatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccatcctcctaaaacctatctaattg 32287377  T
Q  260 atttccatctttt 272  Q
    |||||||| ||||    
T  32287378 atttccatatttt 32287390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 88 - 267
Target Start/End: Complemental strand, 980176 - 979997
Alignment:
Q  88 aaatctcttattcctaaacctaacattgttgccctaattcca-cctaatattt-aagctaagaaattgtagctacttttccatccttcaaaacctaacca 185  Q
    |||||||||||||||||||  | | | ||||||||||||  | |||||||||| || |||| |  || |||| |||||||| ||||||||||||||||||    
T  980176 aaatctcttattcctaaacaaagcttggttgccctaattttaacctaatattttaacctaata--ttttagcaacttttccctccttcaaaacctaacca 980079  T
Q  186 tatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattgatttccat 267  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||||||||| |||||||||||||||    
T  980078 tatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactccccctaaaacctatctaattgatttccat 979997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 180206 - 180319
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||||||||| |    
T  180206 tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactccccctaaaacctatc 180305  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  180306 taattgatttccat 180319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 154 - 267
Target Start/End: Complemental strand, 980563 - 980450
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||||||||| |    
T  980563 tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactccccctaaaacctatc 980464  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  980463 taattgatttccat 980450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 2444119 - 2444232
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||||||||| |    
T  2444119 tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactccccctaaaacctatc 2444218  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  2444219 taattgatttccat 2444232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 13899096 - 13899209
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||| |    
T  13899096 tagcaacttttccctccatcaaaacctaaccatatttcctaatttccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatc 13899195  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  13899196 taattgatttccat 13899209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 159 - 267
Target Start/End: Complemental strand, 42111750 - 42111642
Alignment:
Q  159 acttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaatt 258  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||| ||||||    
T  42111750 acttttccctccttcaaaacctaaccatattttctaattcccctcctccaaaccctaaccatcatttcctaacttcactcctcctaaaacctatctaatt 42111651  T
Q  259 gatttccat 267  Q
    |||||||||    
T  42111650 gatttccat 42111642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 154 - 261
Target Start/End: Complemental strand, 5001207 - 5001100
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |    
T  5001207 tagcaacttttccctccttcaaaacctaaccttatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatc 5001108  T
Q  254 taattgat 261  Q
    ||||||||    
T  5001107 taattgat 5001100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 154 - 261
Target Start/End: Complemental strand, 5012877 - 5012770
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |    
T  5012877 tagcaacttttccctccttcaaaacctaaccttatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatc 5012778  T
Q  254 taattgat 261  Q
    ||||||||    
T  5012777 taattgat 5012770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 14039713 - 14039826
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||| |||||||||||||||| |    
T  14039713 tagcaacttttccctccatcaaaacctaaccatatttcctaatttccctcctccaaaccctaacaatgatttcctaacttcactcctcctaaaacctatc 14039812  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  14039813 taattgatttccat 14039826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 19641068 - 19641181
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||| ||||||||| |    
T  19641068 tagcaacttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctagccatgatttcctaacttcactcctcataaaacctatc 19641167  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  19641168 taattgatttccat 19641181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 19839661 - 19839774
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||| ||||||||| |    
T  19839661 tagcaacttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctagccatgatttcctaacttcactcctcataaaacctatc 19839760  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  19839761 taattgatttccat 19839774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 40602731 - 40602844
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| |||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||| |    
T  40602731 tagcaacttttccctccttcaaaatctaaccatattttctaatttccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatc 40602830  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  40602831 taattgatttccat 40602844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 154 - 267
Target Start/End: Complemental strand, 21591271 - 21591158
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||||||||||||||||||||||  |||||||||||||| |||| ||||||||||||||||||| ||| |||||||||||||||| |    
T  21591271 tagcaacttttccctccttcaaaacctaaccatattctctaattcccctccttcaaagcctaaccatgatttcctaacttcactcctcctaaaacctatc 21591172  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  21591171 taattgatttccat 21591158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 159 - 272
Target Start/End: Original strand, 32287013 - 32287126
Alignment:
Q  159 acttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaatt 258  Q
    |||||||| ||||| |||||||||| | ||||||| ||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||    
T  32287013 acttttccctcctttaaaacctaactacatttcctgattcctctcctccaaaccctaaccatgattttctaatttccctcctcctaaaacctatctaatt 32287112  T
Q  259 gatttccatctttt 272  Q
    ||||||||| ||||    
T  32287113 gatttccatatttt 32287126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 93 - 242
Target Start/End: Original strand, 204299 - 204448
Alignment:
Q  93 tcttattcctaaacctaacattgttgccctaattcca-cctaatatttaagctaagaaattgtagctacttttccatccttcaaaacctaaccatatttc 191  Q
    ||||||||||||||  | | ||||||||||||||  | |||||||||| | || | | ||| |||| |||||||| |||||||||||||||||||||| |    
T  204299 tcttattcctaaacaaagctttgttgccctaattttaacctaatattttaactta-atattttagcaacttttccctccttcaaaacctaaccatattcc 204397  T
Q  192 ctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcc 242  Q
    ||||||| ||||||||||||||||||||||||||||||| ||| |||||||    
T  204398 ctaattcacctcctccaaaccctaaccatgatttcctaacttcactcctcc 204448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 181 - 267
Target Start/End: Complemental strand, 980331 - 980245
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattgatttccat 267  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||||||||| |||||||||||||||    
T  980331 aaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactccccctaaaacctatctaattgatttccat 980245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 35433083 - 35433010
Alignment:
Q  150 attgtagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgat 223  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  35433083 attgtagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaactctaaccatgat 35433010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 143 - 223
Target Start/End: Complemental strand, 1925594 - 1925514
Alignment:
Q  143 ctaagaaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgat 223  Q
    |||| |||||||||| |||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  1925594 ctaaaaaattgtagccacttttctctccttcaaaacctaaccatatttcctaattccccttctccaaaccctaaccatgat 1925514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 185 - 272
Target Start/End: Original strand, 32287143 - 32287230
Alignment:
Q  185 atatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattgatttccatctttt 272  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||  |||||||||||||| ||||    
T  32287143 atattttctaattcccctcctccaaaccttaaccatgatttcctaatttccctcctcctaaaacttatgtaattgatttccatatttt 32287230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 154 - 220
Target Start/End: Original strand, 2296976 - 2297042
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccat 220  Q
    |||| |||||||| ||||| ||||||||||||||||||||||||| ||||||||||||| |||||||    
T  2296976 tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 2297042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 154 - 220
Target Start/End: Original strand, 25643737 - 25643803
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccat 220  Q
    |||| |||||||| ||||| ||||||||||||||||||||||||| ||||||||||||| |||||||    
T  25643737 tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 25643803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 154 - 220
Target Start/End: Original strand, 13900052 - 13900121
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaatt---cccctcctccaaaccctaaccat 220  Q
    |||| |||||||||||||| ||||||||||||||||||||||||   | |||||||||||||||||||||    
T  13900052 tagcaacttttccatcctttaaaacctaaccatatttcctaattctcctcctcctccaaaccctaaccat 13900121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 1925753 - 1925707
Alignment:
Q  17 aatatttaacctaaaaaattgtagctacttttccctccttcaaaacc 63  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  1925753 aatatttaacctaaaaaattgtagatacttttccctccttcaaaacc 1925707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 220
Target Start/End: Original strand, 6120837 - 6120903
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccat 220  Q
    |||| |||||||| ||||| ||||||||||||||||| ||||||| ||||||||||||| |||||||    
T  6120837 tagcaacttttccctcctttaaaacctaaccatattttctaattctcctcctccaaaccttaaccat 6120903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 13899834 - 13899908
Alignment:
Q  17 aatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 86  Q
    |||||||||||||||||||| |||| |||||||||||||||||     ||||||||||||||||| |||||||||    
T  13899834 aatatttaacctaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattaccctcctcc 13899908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 35433359 - 35433287
Alignment:
Q  108 taacattgttgccctaattccacctaatatttaagctaagaaattgtagctacttttccatccttcaaaacct 180  Q
    ||||| ||||||||||||||||||||||||||||  ||| || ||||||| |||||||  |||||||||||||    
T  35433359 taacactgttgccctaattccacctaatatttaatttaaaaagttgtagccacttttctctccttcaaaacct 35433287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 165
Target Start/End: Complemental strand, 27999917 - 27999854
Alignment:
Q  102 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattgtagctacttttc 165  Q
    |||||||||||  ||||||||||||||||||||||||||| |||| |||||||| | |||||||    
T  27999917 taaacctaacaccgttgccctaattccacctaatatttaacctaaaaaattgtaaccacttttc 27999854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 165
Target Start/End: Complemental strand, 28090651 - 28090588
Alignment:
Q  102 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattgtagctacttttc 165  Q
    |||||||||||  ||||||||||||||||||||||||||| |||| |||||||| | |||||||    
T  28090651 taaacctaacaccgttgccctaattccacctaatatttaacctaaaaaattgtaaccacttttc 28090588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 165
Target Start/End: Complemental strand, 28096974 - 28096911
Alignment:
Q  102 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattgtagctacttttc 165  Q
    |||||||||||  ||||||||||||||||||||||||||| |||| |||||||| | |||||||    
T  28096974 taaacctaacaccgttgccctaattccacctaatatttaacctaaaaaattgtaaccacttttc 28096911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 1271964 - 1272014
Alignment:
Q  114 tgttgccctaattccacctaatatttaagctaagaaattgtagctactttt 164  Q
    |||||||||||||||||||||||||||| |||| |||||||||| ||||||    
T  1271964 tgttgccctaattccacctaatatttaacctaaaaaattgtagccactttt 1272014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 2297061 - 2297099
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    |||||||||||||||||||||||||||||||||||||||    
T  2297061 aaccatatttcctaattcccctcctccaaaccctaacca 2297099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 6120922 - 6120960
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    |||||||||||||||||||||||||||||||||||||||    
T  6120922 aaccatatttcctaattcccctcctccaaaccctaacca 6120960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 13905732 - 13905806
Alignment:
Q  17 aatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 86  Q
    ||||||||||| |||||||| |||| |||||||||||||||||     ||||||||||||||||| |||||||||    
T  13905732 aatatttaacccaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc 13905806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 25643822 - 25643860
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    |||||||||||||||||||||||||||||||||||||||    
T  25643822 aaccatatttcctaattcccctcctccaaaccctaacca 25643860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 26453369 - 26453443
Alignment:
Q  17 aatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 86  Q
    |||||||||||||||||||| |||| ||||||| |||||||||     ||||||||||||||||| |||||||||    
T  26453369 aatatttaacctaaaaaattatagccacttttctctccttcaaaacctaaccatatttcctaattcccctcctcc 26453443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 27999764 - 27999718
Alignment:
Q  17 aatatttaacctaaaaaattgtagctacttttccctccttcaaaacc 63  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||    
T  27999764 aatatttaacctaaaaaattgtagccacttttccctccttcataacc 27999718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 28090498 - 28090452
Alignment:
Q  17 aatatttaacctaaaaaattgtagctacttttccctccttcaaaacc 63  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||    
T  28090498 aatatttaacctaaaaaattgtagccacttttccctccttcataacc 28090452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 28096821 - 28096775
Alignment:
Q  17 aatatttaacctaaaaaattgtagctacttttccctccttcaaaacc 63  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||    
T  28096821 aatatttaacctaaaaaattgtagccacttttccctccttcataacc 28096775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 35433249 - 35433203
Alignment:
Q  17 aatatttaacctaaaaaattgtagctacttttccctccttcaaaacc 63  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||    
T  35433249 aatatttaacctaaaaagttgtagccacttttccctccttcaaaacc 35433203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 40603205 - 40603279
Alignment:
Q  17 aatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 86  Q
    |||||||||||||||||||| |||| ||||||| |||||||||     ||||||||||||||||| |||||||||    
T  40603205 aatatttaacctaaaaaattatagccacttttctctccttcaaaacctaaccatatttcctaattcccctcctcc 40603279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 13900140 - 13900178
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  13900140 aaccatattttctaattcccctcctccaaaccctaacca 13900178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 86
Target Start/End: Complemental strand, 35433092 - 35433026
Alignment:
Q  25 acctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 86  Q
    |||||||| |||||||| |||||||||||||||||     ||||||||||||||||| |||||||||    
T  35433092 acctaaaatattgtagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc 35433026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 1925596 - 1925558
Alignment:
Q  25 acctaaaaaattgtagctacttttccctccttcaaaacc 63  Q
    ||||||||||||||||| ||||||| |||||||||||||    
T  1925596 acctaaaaaattgtagccacttttctctccttcaaaacc 1925558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 13899345 - 13899383
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  13899345 aaccatatttcctaactcccctcctccaaaccctcacca 13899383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 13899479 - 13899517
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  13899479 aaccatatttcctaactcccctcctccaaaccctcacca 13899517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 13899613 - 13899651
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  13899613 aaccatatttcctaactcccctcctccaaaccctcacca 13899651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 14039962 - 14040000
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  14039962 aaccatatttcctaactcccctcctccaaaccctcacca 14040000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 26453144 - 26453182
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  26453144 aaccatatttcctaactcccctcctccaaaccctcacca 26453182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 40602980 - 40603018
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  40602980 aaccatatttcctaactcccctcctccaaaccctcacca 40603018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 26452895 - 26452948
Alignment:
Q  38 tagctacttttccctccttcaaaacc-----atatttcctaatttccctcctcc 86  Q
    |||| |||||||||||||||||||||     |||||||||||||||||||||||    
T  26452895 tagcaacttttccctccttcaaaacctaaccatatttcctaatttccctcctcc 26452948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 191
Target Start/End: Original strand, 26453290 - 26453327
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttc 191  Q
    |||| |||||||| ||||||||||||||||||||||||    
T  26453290 tagcaacttttccctccttcaaaacctaaccatatttc 26453327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 191
Target Start/End: Original strand, 40603126 - 40603163
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttc 191  Q
    |||| |||||||| ||||||||||||||||||||||||    
T  40603126 tagcaacttttccctccttcaaaacctaaccatatttc 40603163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 86
Target Start/End: Original strand, 32287404 - 32287464
Alignment:
Q  31 aaaattgtagctacttttccctccttcaaaac-----catatttcctaatttccctcctcc 86  Q
    ||||||||| | ||||||||||||||||||||     |||||||||||||| |||||||||    
T  32287404 aaaattgtaaccacttttccctccttcaaaacctaatcatatttcctaattcccctcctcc 32287464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 134; Significance: 1e-69; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 102 - 283
Target Start/End: Original strand, 20844892 - 20845073
Alignment:
Q  102 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccc 201  Q
    ||||||||||| |||||||||||||||||||||||||||| |||| |||||||||| |||||| | |||||||||||||||| ||||||||||||||||     
T  20844892 taaacctaacactgttgccctaattccacctaatatttaacctaaaaaattgtagccactttttcctccttcaaaacctaacaatatttcctaattccct 20844991  T
Q  202 tcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattgatttccatcttttcttttgccata 283  Q
    |||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||    
T  20844992 tcctccaaaccctaactatgatttcctaatttacctcctcctaaaacctacctaattgatttccatattttcttttgccata 20845073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 88 - 283
Target Start/End: Original strand, 20842236 - 20842431
Alignment:
Q  88 aaatctcttattcctaaacctaacattgttgccctaattccacctaatatttaagctaagaaattgtagctacttttccatccttcaaaacctaaccata 187  Q
    |||||| |||||  ||||| ||||| || ||| |||||||||||||||||||||  ||| |||||||||| | |||||| |||||||||||||||| |||    
T  20842236 aaatcttttatttataaacgtaacactgctgctctaattccacctaatatttaacttaaaaaattgtagccatttttccctccttcaaaacctaacaata 20842335  T
Q  188 tttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattgatttccatcttttcttttgccata 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||    
T  20842336 tttcctaattcccctcctccaaaccctaaccatgatttcctaatttcccttctcctaaaacctacctaattgatttccatattttcttttgccata 20842431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 102 - 283
Target Start/End: Original strand, 20844648 - 20844829
Alignment:
Q  102 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccc 201  Q
    ||||||||||| |||||||||||||||||||||||||||| |||| ||||||| |  | |||||| || ||||||||||||| |||||||||||||||||    
T  20844648 taaacctaacactgttgccctaattccacctaatatttaacctaaaaaattgtggtcatttttccctcattcaaaacctaacgatatttcctaattcccc 20844747  T
Q  202 tcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattgatttccatcttttcttttgccata 283  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||| |||||||    
T  20844748 tcctccaaaccctaaccatgatttcctaattttcctcctcctaaaacctacctaattgatttccatattttcttatgccata 20844829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 102 - 251
Target Start/End: Original strand, 23179435 - 23179584
Alignment:
Q  102 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccc 201  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||| |||| |||||||| ||||||||||||||||||||||||||||||||||    
T  23179435 taaacctaacattgttgccctaattccacctaatatttaacctaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattcccc 23179534  T
Q  202 tcctccaaaccctaaccatgatttcctaatttctctcctcctaaaaccta 251  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  23179535 tcctccaaaccctaaccatgatttcctaatttccctcctcctaaaaccta 23179584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 102 - 251
Target Start/End: Original strand, 23179244 - 23179393
Alignment:
Q  102 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccc 201  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||| |||| |||||||| ||||||||||||||||||||||||||||||||||    
T  23179244 taaacctaacattgttgccctaattccacctaatatttaacctaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattcccc 23179343  T
Q  202 tcctccaaaccctaaccatgatttcctaatttctctcctcctaaaaccta 251  Q
    |||||| |||||||||||||||||||||||||| ||| ||||||||||||    
T  23179344 tcctcccaaccctaaccatgatttcctaatttccctcttcctaaaaccta 23179393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 143 - 279
Target Start/End: Original strand, 20844442 - 20844578
Alignment:
Q  143 ctaagaaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcc 242  Q
    |||| |||||||||| | |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  20844442 ctaaaaaattgtagccatttttccctccttcaaaacctaaccatatttcataattcccctcctccaaaccctaaccatgatttcctaatttccctcctcc 20844541  T
Q  243 taaaacctacctaattgatttccatcttttcttttgc 279  Q
    ||||||||||||||||||||||||| |||||||||||    
T  20844542 taaaacctacctaattgatttccatattttcttttgc 20844578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 168 - 283
Target Start/End: Original strand, 32672852 - 32672967
Alignment:
Q  168 tccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattgatttccat 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  32672852 tccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacctatctaattgatttccat 32672951  T
Q  268 cttttcttttgccata 283  Q
     |||||| ||||||||    
T  32672952 attttctgttgccata 32672967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 168 - 283
Target Start/End: Original strand, 23179592 - 23179707
Alignment:
Q  168 tccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattgatttccat 267  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  23179592 tccttcaaaacctaaccatatttcataattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacctatctaattgatttccat 23179691  T
Q  268 cttttcttttgccata 283  Q
     |||||| ||||||||    
T  23179692 attttctgttgccata 23179707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 12651292 - 12651405
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||||||||| |    
T  12651292 tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactccccctaaaacctatc 12651391  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  12651392 taattgatttccat 12651405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 143 - 264
Target Start/End: Original strand, 20842440 - 20842561
Alignment:
Q  143 ctaagaaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcc 242  Q
    |||| |||||||||| | |||||| || |||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  20842440 ctaaaaaattgtagccatttttccctcattcaaaacataaccatatttcataattcccctcctccaaaccctaaccatgattttctaatttccctcctcc 20842539  T
Q  243 taaaacctacctaattgatttc 264  Q
    ||||||||||||||||||||||    
T  20842540 taaaacctacctaattgatttc 20842561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 23178415 - 23178528
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||||||||| |    
T  23178415 tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactccccctaaaacctatc 23178514  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  23178515 taattgatttccat 23178528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 23184344 - 23184457
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||||||||| |    
T  23184344 tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactccccctaaaacctatc 23184443  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  23184444 taattgatttccat 23184457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 34757338 - 34757451
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||||||||| |    
T  34757338 tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactccccctaaaacctatc 34757437  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  34757438 taattgatttccat 34757451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 39874172 - 39874285
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||||||||| |    
T  39874172 tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactccccctaaaacctatc 39874271  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  39874272 taattgatttccat 39874285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 143 - 266
Target Start/End: Original strand, 20845082 - 20845205
Alignment:
Q  143 ctaagaaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcc 242  Q
    |||| ||||||| || |||||||| |||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||| ||||||| ||||||     
T  20845082 ctaaaaaattgtggccacttttccctccttcaaaacctaactatatttcctaattctcctccttcaaaccctaaccatgatttcgtaatttccctcctca 20845181  T
Q  243 taaaacctacctaattgatttcca 266  Q
    ||||||||||||||||||||||||    
T  20845182 taaaacctacctaattgatttcca 20845205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 160 - 267
Target Start/End: Original strand, 23180082 - 23180189
Alignment:
Q  160 cttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattg 259  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||||||||| |||||||    
T  23180082 cttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactccccctaaaacctatctaattg 23180181  T
Q  260 atttccat 267  Q
    ||||||||    
T  23180182 atttccat 23180189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 23178673 - 23178786
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||| |    
T  23178673 tagcaacttttccctccatcaaaacctaactatatttcctaatttccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatc 23178772  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  23178773 taattgatttccat 23178786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 161 - 267
Target Start/End: Original strand, 32671996 - 32672102
Alignment:
Q  161 ttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattga 260  Q
    |||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||| |||||||||||||||| ||||||||    
T  32671996 ttttccctccatcaaaacctaaccatatttcctaatttccctcctccaaaccctaactatgatttcctaacttcactcctcctaaaacctatctaattga 32672095  T
Q  261 tttccat 267  Q
    |||||||    
T  32672096 tttccat 32672102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 154 - 263
Target Start/End: Original strand, 10037189 - 10037298
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||| | | |    
T  10037189 tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatcatttcctaacttcactcctcctaaaatcaatc 10037288  T
Q  254 taattgattt 263  Q
    ||||||||||    
T  10037289 taattgattt 10037298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 161 - 251
Target Start/End: Original strand, 32672754 - 32672844
Alignment:
Q  161 ttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaaccta 251  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  32672754 ttttccctccttcaaaacctaaccatatttcctaattctcctcctccaaaccctaactatgatttcctaatttccctcctcctaaaaccta 32672844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 3611910 - 3611844
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccat 220  Q
    |||| |||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  3611910 tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 3611844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 20109196 - 20109130
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccat 220  Q
    |||| |||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  20109196 tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 20109130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 20109964 - 20109898
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccat 220  Q
    |||| |||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  20109964 tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 20109898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 30094426 - 30094369
Alignment:
Q  161 ttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaacc 218  Q
    |||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  30094426 ttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaacc 30094369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 23179275 - 23179349
Alignment:
Q  17 aatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 86  Q
    |||||||||||||||||||| |||| |||||||||||||||||     ||||||||||||||||| |||||||||    
T  23179275 aatatttaacctaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc 23179349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 23179466 - 23179540
Alignment:
Q  17 aatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 86  Q
    |||||||||||||||||||| |||| |||||||||||||||||     ||||||||||||||||| |||||||||    
T  23179466 aatatttaacctaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc 23179540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 3611825 - 3611787
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    |||||||||||||||||||||||||||||||||||||||    
T  3611825 aaccatatttcctaattcccctcctccaaaccctaacca 3611787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 20842281 - 20842355
Alignment:
Q  17 aatatttaacctaaaaaattgtagctacttttccctccttcaaaacc-----atatttcctaatttccctcctcc 86  Q
    |||||||||| |||||||||||||| | |||||||||||||||||||     ||||||||||||| |||||||||    
T  20842281 aatatttaacttaaaaaattgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctcc 20842355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 20844923 - 20844969
Alignment:
Q  17 aatatttaacctaaaaaattgtagctacttttccctccttcaaaacc 63  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||    
T  20844923 aatatttaacctaaaaaattgtagccactttttcctccttcaaaacc 20844969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 219
Target Start/End: Complemental strand, 30094345 - 30094310
Alignment:
Q  184 catatttcctaattcccctcctccaaaccctaacca 219  Q
    ||||||||||||||||||||||||||||||||||||    
T  30094345 catatttcctaattcccctcctccaaaccctaacca 30094310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 20109111 - 20109073
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  20109111 aaccatattttctaattcccctcctccaaaccctaacca 20109073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 20109746 - 20109708
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  20109746 aaccatattttctaattcccctcctccaaaccctaacca 20109708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 20109879 - 20109841
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  20109879 aaccatattttctaattcccctcctccaaaccctaacca 20109841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 20844440 - 20844506
Alignment:
Q  25 acctaaaaaattgtagctacttttccctccttcaaaacc-----atatttcctaatttccctcctcc 86  Q
    ||||||||||||||||| | |||||||||||||||||||     ||||||| ||||| |||||||||    
T  20844440 acctaaaaaattgtagccatttttccctccttcaaaacctaaccatatttcataattcccctcctcc 20844506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 20844679 - 20844753
Alignment:
Q  17 aatatttaacctaaaaaattgtagctacttttccctccttcaaaacc-----atatttcctaatttccctcctcc 86  Q
    |||||||||||||||||||||| |  | ||||||||| |||||||||     ||||||||||||| |||||||||    
T  20844679 aatatttaacctaaaaaattgtggtcatttttccctcattcaaaacctaacgatatttcctaattcccctcctcc 20844753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 20845080 - 20845118
Alignment:
Q  25 acctaaaaaattgtagctacttttccctccttcaaaacc 63  Q
    |||||||||||||| || |||||||||||||||||||||    
T  20845080 acctaaaaaattgtggccacttttccctccttcaaaacc 20845118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 23178922 - 23178960
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  23178922 aaccatatttcctaactcccctcctccaaaccctcacca 23178960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 23179056 - 23179094
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  23179056 aaccatatttcctaactcccctcctccaaaccctcacca 23179094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 32672238 - 32672276
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  32672238 aaccatatttcctaactcccctcctccaaaccctcacca 32672276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 32672506 - 32672544
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  32672506 aaccatatttcctaactcccctcctccaaaccctcacca 32672544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 32672640 - 32672678
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  32672640 aaccatatttcctaactcccctcctccaaaccctcacca 32672678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 128; Significance: 4e-66; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 89 - 283
Target Start/End: Complemental strand, 45507557 - 45507363
Alignment:
Q  89 aatctcttattcctaaacctaacattgttgccctaattccacctaatatttaagctaagaa-attgtagctacttttccatccttcaaaacctaaccata 187  Q
    ||||| |||||  ||||||||||||||||| |||||||| ||||||||||||| |||| || |||||||| | |||||| | |||||||||||||| |||    
T  45507557 aatcttttatttataaacctaacattgttgtcctaattc-acctaatatttaacctaaaaatattgtagccatttttcctttcttcaaaacctaactata 45507459  T
Q  188 tttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattgatttccatcttttcttttgccata 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  45507458 tttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacctacctaattgatttccatattttcttttgccata 45507363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 89 - 251
Target Start/End: Complemental strand, 35598310 - 35598148
Alignment:
Q  89 aatctcttattcctaaacctaacattgttgccctaattccacctaatatttaagctaagaaattgtagctacttttccatccttcaaaacctaaccatat 188  Q
    ||||| |||||  |||||||||||||||||||||||||||||||||||||||| |||| ||||| |||| |||||||| |||||||||||||||||||||    
T  35598310 aatcttttatttataaacctaacattgttgccctaattccacctaatatttaacctaaaaaattatagccacttttccctccttcaaaacctaaccatat 35598211  T
Q  189 ttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaaccta 251  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  35598210 ttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctactaaaaccta 35598148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 143 - 283
Target Start/End: Complemental strand, 45507354 - 45507214
Alignment:
Q  143 ctaagaaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcc 242  Q
    |||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  45507354 ctaaaaaattgtagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcc 45507255  T
Q  243 taaaacctacctaattgatttccatcttttcttttgccata 283  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  45507254 taaaacctacctaattgatttccatattttcttttgccata 45507214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 102 - 251
Target Start/End: Complemental strand, 39514348 - 39514199
Alignment:
Q  102 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccc 201  Q
    ||||||||||| |||||||||| ||||||||||||||||| |||| ||||| |||| |||||||| ||||||||||||||||||||||||||||||||||    
T  39514348 taaacctaacaatgttgccctagttccacctaatatttaacctaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattcccc 39514249  T
Q  202 tcctccaaaccctaaccatgatttcctaatttctctcctcctaaaaccta 251  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  39514248 tcctccaaaccctaaccatgatttcctaatttccctcctcctaaaaccta 39514199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 102 - 251
Target Start/End: Complemental strand, 2052206 - 2052057
Alignment:
Q  102 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccc 201  Q
    |||||||||||||||||||||||||||| ||||||||||| |||| ||||| |||| |||||||  ||||||||||||||||||||||||||||||||||    
T  2052206 taaacctaacattgttgccctaattccaactaatatttaacctaaaaaattatagccacttttctctccttcaaaacctaaccatatttcctaattcccc 2052107  T
Q  202 tcctccaaaccctaaccatgatttcctaatttctctcctcctaaaaccta 251  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  2052106 tcctccaaaccctaaccatgatttcctaatttccctcctcttaaaaccta 2052057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 88 - 232
Target Start/End: Complemental strand, 35597876 - 35597733
Alignment:
Q  88 aaatctcttattcctaaacctaacattgttgccctaattccacctaatatttaagctaagaaattgtagctacttttccatccttcaaaacctaaccata 187  Q
    |||||| |||||  ||||||||| |||||||||||||||||||||||||||||| |||| ||||| |||| |||||||| ||||||||||||||| ||||    
T  35597876 aaatcttttatttataaacctaaaattgttgccctaattccacctaatatttaacctaaaaaattatagccacttttccctccttcaaaacctaatcata 35597777  T
Q  188 tttcctaattcccctcctccaaaccctaaccatgatttcctaatt 232  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  35597776 tttcctaattcccctcctccaaaccctaaccat-atttcctaatt 35597733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 168 - 283
Target Start/End: Complemental strand, 2052049 - 2051934
Alignment:
Q  168 tccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattgatttccat 267  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  2052049 tcctttaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacctatctaattgatttccat 2051950  T
Q  268 cttttcttttgccata 283  Q
     |||||| ||||||||    
T  2051949 attttctgttgccata 2051934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 22194875 - 22194988
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |    
T  22194875 tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatc 22194974  T
Q  254 taattgatttccat 267  Q
    ||||||| ||||||    
T  22194975 taattgaattccat 22194988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 154 - 263
Target Start/End: Original strand, 36455222 - 36455331
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |    
T  36455222 tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatc 36455321  T
Q  254 taattgattt 263  Q
    ||||||||||    
T  36455322 taattgattt 36455331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 48958565 - 48958678
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |    
T  48958565 tagcaacttttccctccttcaaaacctaaccatattccctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatc 48958664  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  48958665 taattgatttccat 48958678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 159 - 267
Target Start/End: Original strand, 15689392 - 15689500
Alignment:
Q  159 acttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaatt 258  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||    
T  15689392 acttttctctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaatt 15689491  T
Q  259 gatttccat 267  Q
    |||||||||    
T  15689492 gatttccat 15689500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 159 - 263
Target Start/End: Original strand, 48647756 - 48647860
Alignment:
Q  159 acttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaatt 258  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||    
T  48647756 acttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaatt 48647855  T
Q  259 gattt 263  Q
    |||||    
T  48647856 gattt 48647860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 2585415 - 2585528
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||| |    
T  2585415 tagcaacttttccctccttcaaaacctaaccatattccctaattcccctcctctaaaccctaaccatgatttcctaacttcactcctcctaaaacctatc 2585514  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  2585515 taattgatttccat 2585528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 7476024 - 7476137
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||||||||| |    
T  7476024 tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactccccctaaaacctatc 7476123  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  7476124 taattgatttccat 7476137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 7476585 - 7476698
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||||||||| |    
T  7476585 tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactccccctaaaacctatc 7476684  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  7476685 taattgatttccat 7476698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 9530051 - 9530164
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||||||||| |    
T  9530051 tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactccccctaaaacctatc 9530150  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  9530151 taattgatttccat 9530164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 42492470 - 42492583
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||||||||| |    
T  42492470 tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactccccctaaaacctatc 42492569  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  42492570 taattgatttccat 42492583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 154 - 267
Target Start/End: Complemental strand, 45507162 - 45507049
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||| |    
T  45507162 tagcaacttttccctccttcaaaacctaaccatattccctaattcccttcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatc 45507063  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  45507062 taattgatttccat 45507049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 154 - 263
Target Start/End: Original strand, 50704586 - 50704695
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||| |    
T  50704586 tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaactctaaccatgatttcctaacttcactcctcctaaaacctatc 50704685  T
Q  254 taattgattt 263  Q
    ||||||||||    
T  50704686 taattgattt 50704695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 90 - 267
Target Start/End: Complemental strand, 13929284 - 13929107
Alignment:
Q  90 atctcttattcctaaacctaacattgttgccctaattcca-cctaatattt-aagctaagaaattgtagctacttttccatccttcaaaacctaaccata 187  Q
    |||||||||||||||||  | | ||||||||||||||  | |||||||||| || |||| |  || |||| |||||||| ||||||||||||||||||||    
T  13929284 atctcttattcctaaacaaagctttgttgccctaattttaacctaatattttaacctaata--ttttagcaacttttccctccttcaaaacctaaccata 13929187  T
Q  188 tttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattgatttccat 267  Q
    || || ||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||| |||||||||||||||    
T  13929186 ttaccaaattcccctcctccaaaccctaaccatgatttcctaacttcactcatcctaaaacctatctaattgatttccat 13929107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 154 - 258
Target Start/End: Original strand, 22195045 - 22195149
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |    
T  22195045 tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatc 22195144  T
Q  254 taatt 258  Q
    |||||    
T  22195145 taatt 22195149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 161 - 267
Target Start/End: Original strand, 15689232 - 15689338
Alignment:
Q  161 ttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattga 260  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||| |||||||||||||||| ||||||||    
T  15689232 ttttccctccttcaaaacctaaccatatttcctaattctcctcctccaaaccctaactatgatttcctaacttcactcctcctaaaacctatctaattga 15689331  T
Q  261 tttccat 267  Q
    |||||||    
T  15689332 tttccat 15689338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 168 - 282
Target Start/End: Complemental strand, 35598140 - 35598026
Alignment:
Q  168 tccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattgatttccat 267  Q
    ||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||    
T  35598140 tccttcaaaacctaagcatgtttcctaatttccctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaacctatctaattgatttccat 35598041  T
Q  268 cttttcttttgccat 282  Q
     |||||| |||||||    
T  35598040 attttctgttgccat 35598026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 154 - 267
Target Start/End: Complemental strand, 2052649 - 2052536
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||| ||| |||||||||||||||| |    
T  2052649 tagcaacttttccctccttcaaaacctaaccatattttctaatttccctcctccaaaccctaaccataatttcctaacttcactcctcctaaaacctatc 2052550  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  2052549 taattgatttccat 2052536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 154 - 260
Target Start/End: Complemental strand, 49791701 - 49791595
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| |||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||| |    
T  49791701 tagcaacttttccctccttcaaaacctaacgatatttcctaattcctctcttccaaaccctaaccatgatttcctaatttccctcctcctaaaacctatc 49791602  T
Q  254 taattga 260  Q
    |||||||    
T  49791601 taattga 49791595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 168 - 283
Target Start/End: Complemental strand, 35597762 - 35597648
Alignment:
Q  168 tccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattgatttccat 267  Q
    |||| |||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||| |||||||||||||||    
T  35597762 tcctccaaaccctaaccatatttcctaattccc-tcctccaaatcctaaccatgatttcctaattttcctcctcctaaaacctatctaattgatttccat 35597664  T
Q  268 cttttcttttgccata 283  Q
     |||||| ||||||||    
T  35597663 attttctgttgccata 35597648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 154 - 260
Target Start/End: Complemental strand, 49791977 - 49791871
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| |||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||| |||||||| ||||||||||||| || |    
T  49791977 tagcaacttttccctccttcaaaacctaacgatatttcctaattcctctcttccaaaccctaaccatgattttctaatttccctcctcctaaaacatatc 49791878  T
Q  254 taattga 260  Q
    |||||||    
T  49791877 taattga 49791871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 39514191 - 39514136
Alignment:
Q  168 tccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgat 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39514191 tccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgat 39514136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 2051843 - 2051777
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccat 220  Q
    |||| |||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  2051843 tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 2051777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 36871103 - 36871037
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccat 220  Q
    |||| |||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  36871103 tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 36871037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 102 - 182
Target Start/End: Complemental strand, 38211888 - 38211808
Alignment:
Q  102 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattgtagctacttttccatccttcaaaacctaa 182  Q
    ||||||||||| |||||| ||||||||||||||||||||| |||| |||||||||| | |||||| ||||| |||||||||    
T  38211888 taaacctaacaatgttgcactaattccacctaatatttaacctaaaaaattgtagccatttttccctcctttaaaacctaa 38211808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 35597831 - 35597757
Alignment:
Q  17 aatatttaacctaaaaaattgtagctacttttccctccttcaaaac-----catatttcctaatttccctcctcc 86  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||     |||||||||||||| |||||||||    
T  35597831 aatatttaacctaaaaaattatagccacttttccctccttcaaaacctaatcatatttcctaattcccctcctcc 35597757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 35598266 - 35598192
Alignment:
Q  17 aatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 86  Q
    |||||||||||||||||||| |||| |||||||||||||||||     ||||||||||||||||| |||||||||    
T  35598266 aatatttaacctaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc 35598192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 39514317 - 39514243
Alignment:
Q  17 aatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 86  Q
    |||||||||||||||||||| |||| |||||||||||||||||     ||||||||||||||||| |||||||||    
T  39514317 aatatttaacctaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc 39514243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 49791145 - 49791079
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccat 220  Q
    |||| |||||||| ||||| ||||| ||||||||||||||||||| ||||||||||||| |||||||    
T  49791145 tagcaacttttccctcctttaaaacttaaccatatttcctaattctcctcctccaaaccttaaccat 49791079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 49791522 - 49791456
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccat 220  Q
    |||| |||||||| ||||| ||||| ||||||||||||||||||| ||||||||||||| |||||||    
T  49791522 tagcaacttttccctcctttaaaacttaaccatatttcctaattctcctcctccaaaccttaaccat 49791456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 2052175 - 2052101
Alignment:
Q  17 aatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 86  Q
    |||||||||||||||||||| |||| ||||||| |||||||||     ||||||||||||||||| |||||||||    
T  2052175 aatatttaacctaaaaaattatagccacttttctctccttcaaaacctaaccatatttcctaattcccctcctcc 2052101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 86
Target Start/End: Complemental strand, 45507356 - 45507290
Alignment:
Q  25 acctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 86  Q
    ||||||||||||||||| |||||||||||||||||     ||||||||||||||||| |||||||||    
T  45507356 acctaaaaaattgtagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc 45507290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 49791060 - 49791022
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    |||||||||||||||||||||||||||||||||||||||    
T  49791060 aaccatatttcctaattcccctcctccaaaccctaacca 49791022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 49791437 - 49791399
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    |||||||||||||||||||||||||||||||||||||||    
T  49791437 aaccatatttcctaattcccctcctccaaaccctaacca 49791399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 38211857 - 38211811
Alignment:
Q  17 aatatttaacctaaaaaattgtagctacttttccctccttcaaaacc 63  Q
    ||||||||||||||||||||||||| | |||||||||||| ||||||    
T  38211857 aatatttaacctaaaaaattgtagccatttttccctcctttaaaacc 38211811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 2051758 - 2051720
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    ||||| ||||| |||||||||||||||||||||||||||    
T  2051758 aaccaaatttcataattcccctcctccaaaccctaacca 2051720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 2052400 - 2052362
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  2052400 aaccatatttcctaactcccctcctccaaaccctcacca 2052362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 13929105 - 13929067
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  13929105 aaccatatttcctaactcccctcctccaaaccctcacca 13929067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 190
Target Start/End: Original strand, 26209959 - 26210001
Alignment:
Q  148 aaattgtagctacttttccatccttcaaaacctaaccatattt 190  Q
    |||||||||| |||||||| ||||| |||||||||||||||||    
T  26209959 aaattgtagccacttttccctcctttaaaacctaaccatattt 26210001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 36871018 - 36870980
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    ||||| ||||| |||||||||||||||||||||||||||    
T  36871018 aaccaaatttcataattcccctcctccaaaccctaacca 36870980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 50704835 - 50704873
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  50704835 aaccatatttcctaactcccctcctccaaaccctcacca 50704873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 191
Target Start/End: Complemental strand, 2052254 - 2052217
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttc 191  Q
    |||| |||||||| ||||||||||||||||||||||||    
T  2052254 tagcaacttttccctccttcaaaacctaaccatatttc 2052217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 198
Target Start/End: Complemental strand, 49791798 - 49791754
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattc 198  Q
    |||| |||||||| ||||| ||||| |||||||||||||||||||    
T  49791798 tagcaacttttccctcctttaaaacttaaccatatttcctaattc 49791754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 198
Target Start/End: Complemental strand, 49792074 - 49792030
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattc 198  Q
    |||| |||||||| ||||| ||||| |||||||||||||||||||    
T  49792074 tagcaacttttccctcctttaaaacttaaccatatttcctaattc 49792030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 126; Significance: 6e-65; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 102 - 283
Target Start/End: Original strand, 3589194 - 3589375
Alignment:
Q  102 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccc 201  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||| |||| | |||||| ||||||||||||||||||||||| ||||||||||    
T  3589194 taaacctaacattgttgccctaattccacctaatatttaacctaaaaaattatagccatttttccctccttcaaaacctaaccatattttctaattcccc 3589293  T
Q  202 tcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattgatttccatcttttcttttgccata 283  Q
    ||||||||||||||||||||||||||||||||  |||||||||||| ||| ||||||||||| ||| |||||| ||||||||    
T  3589294 tcctccaaaccctaaccatgatttcctaattttcctcctcctaaaatctatctaattgattttcatattttctgttgccata 3589375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 159 - 267
Target Start/End: Complemental strand, 29371768 - 29371660
Alignment:
Q  159 acttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaatt 258  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||    
T  29371768 acttttccctccttcaaaatctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaatt 29371669  T
Q  259 gatttccat 267  Q
    |||||||||    
T  29371668 gatttccat 29371660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 154 - 261
Target Start/End: Original strand, 2271852 - 2271959
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |    
T  2271852 tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatc 2271951  T
Q  254 taattgat 261  Q
    ||||||||    
T  2271952 taattgat 2271959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 154 - 267
Target Start/End: Complemental strand, 33049807 - 33049694
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||||||||| |    
T  33049807 tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactccccctaaaacctatc 33049708  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  33049707 taattgatttccat 33049694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 161 - 267
Target Start/End: Original strand, 24456436 - 24456542
Alignment:
Q  161 ttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattga 260  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||| |||||||||||||||| ||||||||    
T  24456436 ttttccctccttcaaaacctaaccatatttcctaattctcctcctccaaaccctaactatgatttcctaacttcactcctcctaaaacctatctaattga 24456535  T
Q  261 tttccat 267  Q
    |||||||    
T  24456536 tttccat 24456542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 161 - 267
Target Start/End: Complemental strand, 29374318 - 29374212
Alignment:
Q  161 ttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattga 260  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||| |||||||||||||||| ||||||||    
T  29374318 ttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatcgtttcctaacttcactcctcctaaaacctatctaattga 29374219  T
Q  261 tttccat 267  Q
    |||||||    
T  29374218 tttccat 29374212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 154 - 263
Target Start/End: Complemental strand, 33007371 - 33007263
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||  |||||||||||||||| |    
T  33007371 tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcct-caaaccctagccatgatttcctaacttaactcctcctaaaacctatc 33007273  T
Q  254 taattgattt 263  Q
    ||||||||||    
T  33007272 taattgattt 33007263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 220
Target Start/End: Original strand, 29921026 - 29921092
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccat 220  Q
    |||| |||||| | |||||  |||||||||||||||||||||||| |||||||||||||||||||||    
T  29921026 tagcaactttttcctcctttgaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 29921092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 3589225 - 3589271
Alignment:
Q  17 aatatttaacctaaaaaattgtagctacttttccctccttcaaaacc 63  Q
    |||||||||||||||||||| |||| | |||||||||||||||||||    
T  3589225 aatatttaacctaaaaaattatagccatttttccctccttcaaaacc 3589271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 2277454 - 2277492
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  2277454 aaccatatttcctaactcccctcctccaaaccctcacca 2277492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 29921111 - 29921149
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  29921111 aaccatattttttaattcccctcctccaaaccctaacca 29921149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 33007123 - 33007085
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  33007123 aaccatatttcctaactcccctcctccaaaccctcacca 33007085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 126; Significance: 6e-65; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 102 - 251
Target Start/End: Complemental strand, 41862353 - 41862204
Alignment:
Q  102 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccc 201  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||| |||| |||||||| ||||||||||||||||||||||||||||||||||    
T  41862353 taaacctaacattgttgccctaattccacctaatatttaacctaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattcccc 41862254  T
Q  202 tcctccaaaccctaaccatgatttcctaatttctctcctcctaaaaccta 251  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  41862253 tcctccaaaccctaaccatgatttcctaatttccctcctcctaaaaccta 41862204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 102 - 251
Target Start/End: Original strand, 22673737 - 22673886
Alignment:
Q  102 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccc 201  Q
    |||||||||||||||||||||||||||| ||||||||||| |||| ||||| |||| |||||||| ||||||||||||||||||||||||||||||||||    
T  22673737 taaacctaacattgttgccctaattccaactaatatttaacctaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattcccc 22673836  T
Q  202 tcctccaaaccctaaccatgatttcctaatttctctcctcctaaaaccta 251  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  22673837 tcctccaaaccctaaccataatttcctaatttccctcctcctaaaaccta 22673886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 102 - 251
Target Start/End: Complemental strand, 41946872 - 41946721
Alignment:
Q  102 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattgtagctacttttccatccttcaaaacctaacc--atatttcctaattcc 199  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  41946872 taaacctaacattgttgccctaattccacctaatatttaacctaaaaaattatagccacttttccctccttcaaaacctaaccatatatttcctaattcc 41946773  T
Q  200 cctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaaccta 251  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  41946772 cctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaaccta 41946721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 102 - 251
Target Start/End: Original strand, 52680163 - 52680312
Alignment:
Q  102 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccc 201  Q
    |||||||||||||||||||||||||||| ||||||||||| |||| ||||| |||| |||||||  ||||||||||||||||||||||||||||||||||    
T  52680163 taaacctaacattgttgccctaattccaactaatatttaacctaaaaaattatagccacttttctctccttcaaaacctaaccatatttcctaattcccc 52680262  T
Q  202 tcctccaaaccctaaccatgatttcctaatttctctcctcctaaaaccta 251  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  52680263 tcctccaaaccctaaccatgatttcctaatttccctcctcttaaaaccta 52680312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 168 - 283
Target Start/End: Complemental strand, 41862014 - 41861899
Alignment:
Q  168 tccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattgatttccat 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  41862014 tccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacctatctaattgatttccat 41861915  T
Q  268 cttttcttttgccata 283  Q
     |||||| ||||||||    
T  41861914 attttctgttgccata 41861899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 168 - 283
Target Start/End: Original strand, 52680320 - 52680435
Alignment:
Q  168 tccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattgatttccat 267  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  52680320 tcctttaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacctatctaattgatttccat 52680419  T
Q  268 cttttcttttgccata 283  Q
     |||||| ||||||||    
T  52680420 attttctgttgccata 52680435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 35756423 - 35756536
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |    
T  35756423 tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatc 35756522  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  35756523 taattgatttccat 35756536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 42345238 - 42345351
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |    
T  42345238 tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatc 42345337  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  42345338 taattgatttccat 42345351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 154 - 263
Target Start/End: Original strand, 16905836 - 16905945
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |    
T  16905836 tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatc 16905935  T
Q  254 taattgattt 263  Q
    ||||||||||    
T  16905936 taattgattt 16905945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 154 - 267
Target Start/End: Complemental strand, 29363604 - 29363491
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |    
T  29363604 tagcaacttttccctccttcaaaatctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatc 29363505  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  29363504 taattgatttccat 29363491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 159 - 263
Target Start/End: Original strand, 21380325 - 21380429
Alignment:
Q  159 acttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaatt 258  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||    
T  21380325 acttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaatt 21380424  T
Q  259 gattt 263  Q
    |||||    
T  21380425 gattt 21380429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 154 - 257
Target Start/End: Complemental strand, 29363811 - 29363708
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |    
T  29363811 tagcaacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatc 29363712  T
Q  254 taat 257  Q
    ||||    
T  29363711 taat 29363708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 154 - 263
Target Start/End: Original strand, 28380258 - 28380367
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |    
T  28380258 tagcaacttttccccccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatc 28380357  T
Q  254 taattgattt 263  Q
    ||||||||||    
T  28380358 taattgattt 28380367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 52679741 - 52679854
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||| |    
T  52679741 tagcaacttttctctccttcaaaacctaaccatatttcctaatttccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatc 52679840  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  52679841 taattgatttccat 52679854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 154 - 257
Target Start/End: Complemental strand, 29363932 - 29363829
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |    
T  29363932 tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatc 29363833  T
Q  254 taat 257  Q
    ||||    
T  29363832 taat 29363829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 154 - 257
Target Start/End: Original strand, 42345117 - 42345220
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |    
T  42345117 tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatc 42345216  T
Q  254 taat 257  Q
    ||||    
T  42345217 taat 42345220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 154 - 267
Target Start/End: Complemental strand, 30390905 - 30390792
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||| ||| |||||||||||||||| |    
T  30390905 tagcaacttttccctccttcaaaacctaaccatattccctaattcacctcctccaaaccctaactatgatttcctaacttcactcctcctaaaacctatc 30390806  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  30390805 taattgatttccat 30390792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 130 - 251
Target Start/End: Complemental strand, 41862516 - 41862395
Alignment:
Q  130 cctaatatttaagctaagaaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttccta 229  Q
    |||||||||||| |||| ||||| |||| ||||| || || |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  41862516 cctaatatttaacctaaaaaattatagccactttaccctctttcaaaacctaaccatattttctatttcccctcctccaaaccctaaccatgatttccta 41862417  T
Q  230 atttctctcctcctaaaaccta 251  Q
    ||||| ||||||||||||||||    
T  41862416 atttccctcctcctaaaaccta 41862395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 154 - 267
Target Start/End: Complemental strand, 41863241 - 41863128
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||| |    
T  41863241 tagcaacttttccctccatcaaaacctaactatatttcctaatttccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatc 41863142  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  41863141 taattgatttccat 41863128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 53285763 - 53285876
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |    
T  53285763 tagcaactttttcctccttcaaaatctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatc 53285862  T
Q  254 taattgatttccat 267  Q
     |||||||||||||    
T  53285863 caattgatttccat 53285876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 168 - 251
Target Start/End: Complemental strand, 41862105 - 41862022
Alignment:
Q  168 tccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaaccta 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  41862105 tccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaaccta 41862022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 168 - 251
Target Start/End: Complemental strand, 41862196 - 41862113
Alignment:
Q  168 tccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaaccta 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  41862196 tccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaaccta 41862113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 161 - 246
Target Start/End: Original strand, 53285650 - 53285735
Alignment:
Q  161 ttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaa 246  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  53285650 ttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttcactcctcctaaa 53285735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 171 - 267
Target Start/End: Original strand, 22673311 - 22673407
Alignment:
Q  171 ttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattgatttccat 267  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||| |||||||||||||||| |||||||||||||||    
T  22673311 ttcaaaacctaaccatatttcctaatttccctcctccaaaccttaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccat 22673407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 168 - 251
Target Start/End: Complemental strand, 41946713 - 41946630
Alignment:
Q  168 tccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaaccta 251  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  41946713 tccttcaaaacctaaccatatttcataattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaaccta 41946630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 168 - 242
Target Start/End: Original strand, 22673896 - 22673970
Alignment:
Q  168 tccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcc 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  22673896 tccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcc 22673970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 185 - 283
Target Start/End: Complemental strand, 41946546 - 41946448
Alignment:
Q  185 atatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattgatttccatcttttcttttgccata 283  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||| ||| ||||||||||||||| |||||| ||||||||    
T  41946546 atatttcctaattcccctcctccaaaccctaaccatgatttcttaattttcctcctcctaaaatctatctaattgatttccatattttctgttgccata 41946448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 168 - 244
Target Start/End: Complemental strand, 41946622 - 41946546
Alignment:
Q  168 tccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctccta 244  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||    
T  41946622 tccttcaaaacctaactatatttcctaattcccctcctccaaaccctaaccatgatttcttaattttcctcctccta 41946546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 14148636 - 14148570
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccat 220  Q
    |||| |||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  14148636 tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 14148570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 14148490 - 14148424
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccat 220  Q
    |||| |||||||  ||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  14148490 tagcaacttttctctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 14148424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 19518572 - 19518506
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccat 220  Q
    |||| |||||||| || || ||||||||||||||||||||||||| ||||||||||||| |||||||    
T  19518572 tagcaacttttccctcatttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 19518506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 21585388 - 21585322
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccat 220  Q
    |||| |||||||| || || ||||||||||||||||||||||||| ||||||||||||| |||||||    
T  21585388 tagcaacttttccctcatttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 21585322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 22673768 - 22673842
Alignment:
Q  17 aatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 86  Q
    |||||||||||||||||||| |||| |||||||||||||||||     ||||||||||||||||| |||||||||    
T  22673768 aatatttaacctaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc 22673842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 220
Target Start/End: Original strand, 25819683 - 25819749
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccat 220  Q
    |||| |||||||| ||||| ||||| ||||||||||||||||||| ||||||||||||| |||||||    
T  25819683 tagcaacttttccctcctttaaaacataaccatatttcctaattctcctcctccaaaccttaaccat 25819749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 41862322 - 41862248
Alignment:
Q  17 aatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 86  Q
    |||||||||||||||||||| |||| |||||||||||||||||     ||||||||||||||||| |||||||||    
T  41862322 aatatttaacctaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc 41862248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 14148551 - 14148513
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14148551 aaccatatttcctaattcccctcctccaaaccctaacca 14148513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 19518487 - 19518449
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19518487 aaccatatttcctaattcccctcctccaaaccctaacca 19518449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 21585303 - 21585265
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    |||||||||||||||||||||||||||||||||||||||    
T  21585303 aaccatatttcctaattcccctcctccaaaccctaacca 21585265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 25819768 - 25819806
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    |||||||||||||||||||||||||||||||||||||||    
T  25819768 aaccatatttcctaattcccctcctccaaaccctaacca 25819806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 41946841 - 41946795
Alignment:
Q  17 aatatttaacctaaaaaattgtagctacttttccctccttcaaaacc 63  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||    
T  41946841 aatatttaacctaaaaaattatagccacttttccctccttcaaaacc 41946795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 52680194 - 52680268
Alignment:
Q  17 aatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 86  Q
    |||||||||||||||||||| |||| ||||||| |||||||||     ||||||||||||||||| |||||||||    
T  52680194 aatatttaacctaaaaaattatagccacttttctctccttcaaaacctaaccatatttcctaattcccctcctcc 52680268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 16906085 - 16906123
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  16906085 aaccatatttcctaactcccctcctccaaaccctcacca 16906123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 22673543 - 22673581
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  22673543 aaccatatttcctaactcccctcctccaaaccctcacca 22673581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 41862513 - 41862467
Alignment:
Q  17 aatatttaacctaaaaaattgtagctacttttccctccttcaaaacc 63  Q
    |||||||||||||||||||| |||| ||||| ||||| |||||||||    
T  41862513 aatatttaacctaaaaaattatagccactttaccctctttcaaaacc 41862467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 41862858 - 41862820
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  41862858 aaccatatttcctaactcccctcctccaaaccctcacca 41862820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 191
Target Start/End: Original strand, 22673689 - 22673726
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttc 191  Q
    |||| |||||||| ||||||||||||||||||||||||    
T  22673689 tagcaacttttccctccttcaaaacctaaccatatttc 22673726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 214
Target Start/End: Original strand, 28380507 - 28380540
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccct 214  Q
    ||||||||||||||| ||||||||||||||||||    
T  28380507 aaccatatttcctaactcccctcctccaaaccct 28380540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 29363690 - 29363649
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaa 195  Q
    |||| |||||||| |||||||||| |||||||||||||||||    
T  29363690 tagcaacttttccctccttcaaaatctaaccatatttcctaa 29363649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 126; Significance: 6e-65; HSPs: 73)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 102 - 251
Target Start/End: Original strand, 18199247 - 18199396
Alignment:
Q  102 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccc 201  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||| |||| |||||||| ||||||||||||||||||||||||||||||||||    
T  18199247 taaacctaacattgttgccctaattccacctaatatttaacctaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattcccc 18199346  T
Q  202 tcctccaaaccctaaccatgatttcctaatttctctcctcctaaaaccta 251  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18199347 tcctccaaaccctaaccatgatttcctaatttccctcctcctaaaaccta 18199396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 102 - 251
Target Start/End: Complemental strand, 36094105 - 36093956
Alignment:
Q  102 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccc 201  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||| |||| |||||||| ||||||||||||||||||||||||||||||||||    
T  36094105 taaacctaacattgttgccctaattccacctaatatttaacctaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattcccc 36094006  T
Q  202 tcctccaaaccctaaccatgatttcctaatttctctcctcctaaaaccta 251  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  36094005 tcctccaaaccctaaccatgatttcctaatttccctcctcctaaaaccta 36093956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 102 - 251
Target Start/End: Complemental strand, 36094296 - 36094147
Alignment:
Q  102 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccc 201  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||| |||| |||||||| |||||||||||||||| |||||||||||||||||    
T  36094296 taaacctaacattgttgccctaattccacctaatatttaacctaaaaaattatagccacttttccctccttcaaaacctaacaatatttcctaattcccc 36094197  T
Q  202 tcctccaaaccctaaccatgatttcctaatttctctcctcctaaaaccta 251  Q
    |||||| |||||||||||||||||||||||||| ||| ||||||||||||    
T  36094196 tcctcccaaccctaaccatgatttcctaatttccctcttcctaaaaccta 36094147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 102 - 251
Target Start/End: Original strand, 26943598 - 26943747
Alignment:
Q  102 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccc 201  Q
    ||||||||||||||||||| |||||||||||||||||||| |||| ||||| |||  |||||||| ||||||||||||||||||||||| ||||||||||    
T  26943598 taaacctaacattgttgccataattccacctaatatttaacctaaaaaattatagtcacttttccctccttcaaaacctaaccatatttactaattcccc 26943697  T
Q  202 tcctccaaaccctaaccatgatttcctaatttctctcctcctaaaaccta 251  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  26943698 tcctccaaaccctaaccatgatttcttaatttccctcctcctaaaaccta 26943747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 148 - 274
Target Start/End: Complemental strand, 6953386 - 6953260
Alignment:
Q  148 aaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaa 247  Q
    |||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  6953386 aaattgtaaccacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaa 6953287  T
Q  248 cctacctaattgatttccatcttttct 274  Q
    |||| ||||||||||||||| ||||||    
T  6953286 cctatctaattgatttccatattttct 6953260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 116 - 257
Target Start/End: Complemental strand, 18256901 - 18256760
Alignment:
Q  116 ttgccctaattccacctaatatttaagctaagaaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaacccta 215  Q
    ||||| ||||||||||||||||||||||||| |||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18256901 ttgccgtaattccacctaatatttaagctaaaaaattgtagtcacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaacccta 18256802  T
Q  216 accatgatttcctaatttctctcctcctaaaacctacctaat 257  Q
    || ||||||| |||| ||| |||||||||||||||| |||||    
T  18256801 actatgattttctaacttcactcctcctaaaacctatctaat 18256760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 143 - 267
Target Start/End: Original strand, 855061 - 855185
Alignment:
Q  143 ctaagaaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcc 242  Q
    |||| |||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||    
T  855061 ctaaaaaattgtagacacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaactctaactatgatttcctaatttccctcctcc 855160  T
Q  243 taaaacctacctaattgatttccat 267  Q
    |||||||||||||||||||||||||    
T  855161 taaaacctacctaattgatttccat 855185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 90 - 272
Target Start/End: Complemental strand, 6953963 - 6953783
Alignment:
Q  90 atctcttattcctaaacctaacattgttgccctaattccacctaatattt-aagctaagaaattgtagctacttttccatccttcaaaacctaaccatat 188  Q
    ||||||||||||||| |  |||| | |||||||||||  || |||||||| || ||||  ||||||||| |||||||| |||||||||| ||||||||||    
T  6953963 atctcttattcctaagcaaaacactcttgccctaattatacttaatattttaacctaa--aattgtagc-acttttccctccttcaaaatctaaccatat 6953867  T
Q  189 ttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattgatttccatctttt 272  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||| ||||    
T  6953866 ttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaatctatctaattgatttccatatttt 6953783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 148 - 272
Target Start/End: Complemental strand, 36947959 - 36947835
Alignment:
Q  148 aaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaa 247  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  36947959 aaattgtagccacttttccctccttcaaaacctaaccatatttcctaatacccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaa 36947860  T
Q  248 cctacctaattgatttccatctttt 272  Q
    | || ||||||||||||||| ||||    
T  36947859 catatctaattgatttccatatttt 36947835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 168 - 283
Target Start/End: Complemental strand, 36093948 - 36093833
Alignment:
Q  168 tccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattgatttccat 267  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  36093948 tccttcaaaacctaaccatatttcataattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacctatctaattgatttccat 36093849  T
Q  268 cttttcttttgccata 283  Q
     |||||| ||||||||    
T  36093848 attttctgttgccata 36093833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 35713141 - 35713254
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |    
T  35713141 tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatc 35713240  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  35713241 taattgatttccat 35713254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 47724552 - 47724665
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |    
T  47724552 tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatc 47724651  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  47724652 taattgatttccat 47724665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 148 - 272
Target Start/End: Complemental strand, 6953525 - 6953401
Alignment:
Q  148 aaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaa 247  Q
    |||||||| | |||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  6953525 aaattgtaaccacttttccctcccttaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaa 6953426  T
Q  248 cctacctaattgatttccatctttt 272  Q
    |||| ||||||||||||||| ||||    
T  6953425 cctatctaattgatttccatatttt 6953401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 154 - 267
Target Start/End: Complemental strand, 49566082 - 49565969
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||| |    
T  49566082 tagcaacttttccctccttcaaaacctaaccatatttcctaatttccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatc 49565983  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  49565982 taattgatttccat 49565969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 148 - 272
Target Start/End: Complemental strand, 6953768 - 6953644
Alignment:
Q  148 aaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaa 247  Q
    |||||||| | |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||    
T  6953768 aaattgtaaccacttttccctccttcaaaacctaactatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctgttaaaa 6953669  T
Q  248 cctacctaattgatttccatctttt 272  Q
    |||| ||||||||||||||| ||||    
T  6953668 cctatctaattgatttccatatttt 6953644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 159 - 263
Target Start/End: Original strand, 31483606 - 31483710
Alignment:
Q  159 acttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaatt 258  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||    
T  31483606 acttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaatt 31483705  T
Q  259 gattt 263  Q
    |||||    
T  31483706 gattt 31483710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 148 - 264
Target Start/End: Complemental strand, 36947820 - 36947704
Alignment:
Q  148 aaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaa 247  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  36947820 aaattgtagccacttttccctccttcaaaacctaaccatatttcctaatacccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaa 36947721  T
Q  248 cctacctaattgatttc 264  Q
      || ||||||||||||    
T  36947720 tatatctaattgatttc 36947704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 168 - 272
Target Start/End: Complemental strand, 36948078 - 36947974
Alignment:
Q  168 tccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattgatttccat 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||    
T  36948078 tccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacatatctaattgatttccat 36947979  T
Q  268 ctttt 272  Q
     ||||    
T  36947978 atttt 36947974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 168 - 283
Target Start/End: Original strand, 18199404 - 18199519
Alignment:
Q  168 tccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattgatttccat 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||| ||| |||||||||||||||    
T  18199404 tccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcttaattttcctcctcctaaaatctatctaattgatttccat 18199503  T
Q  268 cttttcttttgccata 283  Q
     |||||| ||||||||    
T  18199504 attttctgttgccata 18199519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 168 - 283
Target Start/End: Original strand, 26949100 - 26949215
Alignment:
Q  168 tccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattgatttccat 267  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||| |||||||||||| |||||||||||||||    
T  26949100 tccttcaaaacctaaccatatttcctaactcccctcctccaaactctaaccatgatttcctaatttccctcttcctaaaacctatctaattgatttccat 26949199  T
Q  268 cttttcttttgccata 283  Q
     |||||| ||||||||    
T  26949200 attttctgttgccata 26949215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 154 - 267
Target Start/End: Complemental strand, 1883430 - 1883317
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||| |    
T  1883430 tagcaacttttccctccttcaaaacctaaccatattccctaattcccctcctccaaaccctaactatgatttcctaacttcactcctcctaaaacctatc 1883331  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  1883330 taattgatttccat 1883317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 11823954 - 11824067
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||| ||||||||| |    
T  11823954 tagcaacttttccctccttcaaaacctaaccatatttcctaattccccttctccaaaccctaaccatgatttcctaacttcactcctcataaaacctatc 11824053  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  11824054 taattgatttccat 11824067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 26943936 - 26944049
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||||||||| |    
T  26943936 tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactccccctaaaacctatc 26944035  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  26944036 taattgatttccat 26944049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 186 - 283
Target Start/End: Original strand, 854955 - 855052
Alignment:
Q  186 tatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattgatttccatcttttcttttgccata 283  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||    
T  854955 tattttctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacctacataattgatttccatattttcttttgccata 855052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 154 - 267
Target Start/End: Complemental strand, 36095001 - 36094888
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||| |    
T  36095001 tagcaacttttccctccatcaaaacctaactatatttcctaatttccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatc 36094902  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  36094901 taattgatttccat 36094888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 145 - 257
Target Start/End: Complemental strand, 18199239 - 18199127
Alignment:
Q  145 aagaaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctccta 244  Q
    |||| ||| |||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  18199239 aagatattttagcaacttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctccta 18199140  T
Q  245 aaacctacctaat 257  Q
    ||||||| |||||    
T  18199139 aaacctatctaat 18199127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 43509782 - 43509680
Alignment:
Q  161 ttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattga 260  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||| |||||||||||||||| ||||||||    
T  43509782 ttttccctccttcaaaacctaaccatatttcctaatttccctcctccaaaccccaaccatgatttcctaacttcactcctcctaaaacctatctaattga 43509683  T
Q  261 ttt 263  Q
    |||    
T  43509682 ttt 43509680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 26943025 - 26943138
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||| ||||||||||| |||| |    
T  26943025 tagcaacttttccctccatcaaaacctaaccatatttcctaatttccctcctccaaaccctaaccatgattttctaacttcactcctcctaaagcctatc 26943124  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  26943125 taattgatttccat 26943138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 154 - 267
Target Start/End: Complemental strand, 33006143 - 33006031
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||| |||||||| |    
T  33006143 tagcaacttttccctccttcaaaacctaacc-tatttcctaattcccctcctccaaaccctaaccatcatttcctaacttcactcctccgaaaacctatc 33006045  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  33006044 taattgatttccat 33006031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 154 - 267
Target Start/End: Complemental strand, 35860619 - 35860506
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||||| |||||||||||||||||||||||| || |||||||||| |||||||||||||||||| ||| |||||||||||||||| |    
T  35860619 tagcaacttttccctcctttaaaacctaaccatatttcctaatttccttcctccaaacgctaaccatgatttcctaacttcactcctcctaaaacctatc 35860520  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  35860519 taattgatttccat 35860506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 154 - 267
Target Start/End: Complemental strand, 36091095 - 36090982
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| |||||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||| ||| ||||||||||||| || |    
T  36091095 tagcaacttttccctccttcaaaacctaaccatattccctagttcctctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacatatc 36090996  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  36090995 taattgatttccat 36090982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 154 - 267
Target Start/End: Complemental strand, 36095216 - 36095103
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||||| |||||||||||||||||||||||| || |||||||||| |||||||||||||||||| ||| |||||||||||||||| |    
T  36095216 tagcaacttttccctcctttaaaacctaaccatatttcctaatttccttcctccaaacgctaaccatgatttcctaacttcactcctcctaaaacctatc 36095117  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  36095116 taattgatttccat 36095103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 148 - 260
Target Start/End: Complemental strand, 36947681 - 36947569
Alignment:
Q  148 aaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaa 247  Q
    |||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||  ||||||| ||||||||||||    
T  36947681 aaattgtagccacttttccctccttcaaaacctaaccatatttccaaattcccctcctccaaaccctaactatgattttttaatttccctcctcctaaaa 36947582  T
Q  248 cctacctaattga 260  Q
    | || ||||||||    
T  36947581 catatctaattga 36947569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 90 - 233
Target Start/End: Complemental strand, 52419673 - 52419531
Alignment:
Q  90 atctcttattcctaaacctaacattgttgccctaattccacctaatatttaagctaagaaattgtagctacttttccatccttcaaaacctaaccatatt 189  Q
    ||||||||||| |||||  | || ||||||| |||||  ||||||||||||| |||| |||| ||||| |||||||| ||||||||||||||||||||||    
T  52419673 atctcttattcataaacaaagcactgttgccttaattatacctaatatttaacctaa-aaatcgtagccacttttccctccttcaaaacctaaccatatt 52419575  T
Q  190 tcctaattcccctcctccaaaccctaaccatgatttcctaattt 233  Q
    | ||||||||||| ||||||| ||||||||||||||||||||||    
T  52419574 ttctaattccccttctccaaatcctaaccatgatttcctaattt 52419531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 851252 - 851365
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||| |||| |||| ||| |||||||||||||||| |    
T  851252 tagcaacttttccctccttcaaaacctaaccatattctctaattcccctcctccaaactctaaccataatttgctaacttcactcctcctaaaacctatc 851351  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  851352 taattgatttccat 851365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 185 - 272
Target Start/End: Complemental strand, 6953627 - 6953540
Alignment:
Q  185 atatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattgatttccatctttt 272  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||| ||||    
T  6953627 atatttcctaattcccctcctccaaaccctaaccatgattttctaatttccctcctcctaaaacctatctaattgatttccatatttt 6953540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 168 - 267
Target Start/End: Complemental strand, 38662216 - 38662117
Alignment:
Q  168 tccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattgatttccat 267  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||| ||| |||||||||||||||| |||||||||||||||    
T  38662216 tcctccaaaacctaaccatatttcctaattcccctcctccaaaccataacaatgattttctaacttcactcctcctaaaacctatctaattgatttccat 38662117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 102 - 186
Target Start/End: Original strand, 26943789 - 26943873
Alignment:
Q  102 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattgtagctacttttccatccttcaaaacctaaccat 186  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||| |||| |||||||| |||||||||||||| ||||    
T  26943789 taaacctaacattgttgccctaattccacctaatatttaacctaaaaaattatagccacttttccctccttcaaaacctacccat 26943873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 851117 - 851198
Alignment:
Q  102 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattgtagctacttttccatccttcaaaacctaac 183  Q
    |||||||||||  ||||||||||||||||||||||||||| |||| |||||||||| |||||||| ||||||||||||||||    
T  851117 taaacctaacaccgttgccctaattccacctaatatttaacctaaaaaattgtagccacttttccctccttcaaaacctaac 851198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 154 - 242
Target Start/End: Complemental strand, 38662264 - 38662177
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcc 242  Q
    |||| |||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| | |||||||    
T  38662264 tagcaacttttctctccttcaaaacctaaccatatttcctaattcccctcctccaaaacctaaccat-atttcctaattcccctcctcc 38662177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 154 - 215
Target Start/End: Complemental strand, 18256742 - 18256681
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaacccta 215  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18256742 tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaacccta 18256681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 13458691 - 13458625
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccat 220  Q
    |||| |||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  13458691 tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 13458625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 220
Target Start/End: Original strand, 17657175 - 17657241
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccat 220  Q
    |||| |||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  17657175 tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 17657241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 186 - 251
Target Start/End: Original strand, 26949027 - 26949092
Alignment:
Q  186 tatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaaccta 251  Q
    |||||| |||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  26949027 tatttcataattcccatcctccaaaccctaaccatgattttctaatttccctcctcctaaaaccta 26949092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 154 - 220
Target Start/End: Original strand, 4585533 - 4585599
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccat 220  Q
    |||| |||||||| ||||| ||||||||||||||||||||||||| ||||||||||||| |||||||    
T  4585533 tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 4585599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 159 - 220
Target Start/End: Original strand, 12257888 - 12257949
Alignment:
Q  159 acttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccat 220  Q
    |||||||| ||||| ||||||||||||||||||||||||| ||||||||||||| |||||||    
T  12257888 acttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 12257949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 16647460 - 16647517
Alignment:
Q  161 ttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaacc 218  Q
    |||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  16647460 ttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaacc 16647517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 851148 - 851194
Alignment:
Q  17 aatatttaacctaaaaaattgtagctacttttccctccttcaaaacc 63  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  851148 aatatttaacctaaaaaattgtagccacttttccctccttcaaaacc 851194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 18199278 - 18199352
Alignment:
Q  17 aatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 86  Q
    |||||||||||||||||||| |||| |||||||||||||||||     ||||||||||||||||| |||||||||    
T  18199278 aatatttaacctaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc 18199352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 36094074 - 36094000
Alignment:
Q  17 aatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 86  Q
    |||||||||||||||||||| |||| |||||||||||||||||     ||||||||||||||||| |||||||||    
T  36094074 aatatttaacctaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc 36094000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 36094265 - 36094191
Alignment:
Q  17 aatatttaacctaaaaaattgtagctacttttccctccttcaaaacc-----atatttcctaatttccctcctcc 86  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||     ||||||||||||| |||||||||    
T  36094265 aatatttaacctaaaaaattatagccacttttccctccttcaaaacctaacaatatttcctaattcccctcctcc 36094191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 4585618 - 4585656
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    |||||||||||||||||||||||||||||||||||||||    
T  4585618 aaccatatttcctaattcccctcctccaaaccctaacca 4585656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 12257968 - 12258006
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    |||||||||||||||||||||||||||||||||||||||    
T  12257968 aaccatatttcctaattcccctcctccaaaccctaacca 12258006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 13458606 - 13458568
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    |||||||||||||||||||||||||||||||||||||||    
T  13458606 aaccatatttcctaattcccctcctccaaaccctaacca 13458568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 18256884 - 18256810
Alignment:
Q  17 aatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 86  Q
    ||||||||| ||||||||||||||  |||||||||||||||||     ||||||||||||||||| |||||||||    
T  18256884 aatatttaagctaaaaaattgtagtcacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc 18256810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 26943820 - 26943866
Alignment:
Q  17 aatatttaacctaaaaaattgtagctacttttccctccttcaaaacc 63  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||    
T  26943820 aatatttaacctaaaaaattatagccacttttccctccttcaaaacc 26943866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 219
Target Start/End: Original strand, 16647541 - 16647576
Alignment:
Q  184 catatttcctaattcccctcctccaaaccctaacca 219  Q
    ||||||||||||||||||||||||||||||||||||    
T  16647541 catatttcctaattcccctcctccaaaccctaacca 16647576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 855059 - 855125
Alignment:
Q  25 acctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 86  Q
    ||||||||||||||||  |||||||||||||||||     ||||||||||||||||| |||||||||    
T  855059 acctaaaaaattgtagacacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc 855125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 26943629 - 26943675
Alignment:
Q  17 aatatttaacctaaaaaattgtagctacttttccctccttcaaaacc 63  Q
    |||||||||||||||||||| |||  |||||||||||||||||||||    
T  26943629 aatatttaacctaaaaaattatagtcacttttccctccttcaaaacc 26943675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 215
Target Start/End: Original strand, 17657260 - 17657294
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaacccta 215  Q
    |||||||||| ||||||||||||||||||||||||    
T  17657260 aaccatattttctaattcccctcctccaaacccta 17657294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 26943274 - 26943312
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  26943274 aaccatatttcctaactcccctcctccaaaccctcacca 26943312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 26943408 - 26943446
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  26943408 aaccatatttcctaactcccctcctccaaaccctcacca 26943446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 31483850 - 31483888
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  31483850 aaccatatttcctaactcccctcctccaaaccctcacca 31483888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 36094618 - 36094580
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  36094618 aaccatatttcctaactcccctcctccaaaccctcacca 36094580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 36094752 - 36094714
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  36094752 aaccatatttcctaactcccctcctccaaaccctcacca 36094714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 52419630 - 52419585
Alignment:
Q  17 aatatttaacctaaaaaattgtagctacttttccctccttcaaaacc 63  Q
    ||||||||||||||||| | ||||| |||||||||||||||||||||    
T  52419630 aatatttaacctaaaaa-tcgtagccacttttccctccttcaaaacc 52419585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 49566082 - 49566029
Alignment:
Q  38 tagctacttttccctccttcaaaacc-----atatttcctaatttccctcctcc 86  Q
    |||| |||||||||||||||||||||     |||||||||||||||||||||||    
T  49566082 tagcaacttttccctccttcaaaacctaaccatatttcctaatttccctcctcc 49566029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 6953387 - 6953327
Alignment:
Q  31 aaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 86  Q
    ||||||||| | |||||||||||||||||     ||||||||||||||||| |||||||||    
T  6953387 aaaattgtaaccacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc 6953327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 6953769 - 6953709
Alignment:
Q  31 aaaattgtagctacttttccctccttcaaaacc-----atatttcctaatttccctcctcc 86  Q
    ||||||||| | |||||||||||||||||||||     ||||||||||||| |||||||||    
T  6953769 aaaattgtaaccacttttccctccttcaaaacctaactatatttcctaattcccctcctcc 6953709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 6953907 - 6953848
Alignment:
Q  31 aaaattgtagctacttttccctccttcaaaa-----ccatatttcctaatttccctcctcc 86  Q
    ||||||||||| |||||||||||||||||||     ||||||||||||||| |||||||||    
T  6953907 aaaattgtagc-acttttccctccttcaaaatctaaccatatttcctaattcccctcctcc 6953848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 63
Target Start/End: Complemental strand, 36947682 - 36947650
Alignment:
Q  31 aaaattgtagctacttttccctccttcaaaacc 63  Q
    ||||||||||| |||||||||||||||||||||    
T  36947682 aaaattgtagccacttttccctccttcaaaacc 36947650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 63
Target Start/End: Complemental strand, 36947821 - 36947789
Alignment:
Q  31 aaaattgtagctacttttccctccttcaaaacc 63  Q
    ||||||||||| |||||||||||||||||||||    
T  36947821 aaaattgtagccacttttccctccttcaaaacc 36947789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 63
Target Start/End: Complemental strand, 36947960 - 36947928
Alignment:
Q  31 aaaattgtagctacttttccctccttcaaaacc 63  Q
    ||||||||||| |||||||||||||||||||||    
T  36947960 aaaattgtagccacttttccctccttcaaaacc 36947928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 122; Significance: 1e-62; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 102 - 251
Target Start/End: Original strand, 22004409 - 22004558
Alignment:
Q  102 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccc 201  Q
    |||||||||||||||||||||||||||||||||||||||| | || ||||| |||| |||||||| ||||||||||||||||||||||||||||||||||    
T  22004409 taaacctaacattgttgccctaattccacctaatatttaacccaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattcccc 22004508  T
Q  202 tcctccaaaccctaaccatgatttcctaatttctctcctcctaaaaccta 251  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  22004509 tcctccaaaccctaaccatgatttcctaatttccctcctcctaaaaccta 22004558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 102 - 251
Target Start/End: Original strand, 22004218 - 22004367
Alignment:
Q  102 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccc 201  Q
    |||||||||||||||||||||||||||||| ||||||||| |||| ||||| |||| |||||||| |||||||||||||||||||||||||||||| |||    
T  22004218 taaacctaacattgttgccctaattccaccgaatatttaacctaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattaccc 22004317  T
Q  202 tcctccaaaccctaaccatgatttcctaatttctctcctcctaaaaccta 251  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  22004318 tcctccaaaccctaaccatgatttcctaatttccctcctcctaaaaccta 22004367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 102 - 249
Target Start/End: Original strand, 7891186 - 7891333
Alignment:
Q  102 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccc 201  Q
    |||||||||||||||||||||||||||| ||||||||||| |||| ||||| |||||| |||||  ||||||||||||||||||||||||||||||||||    
T  7891186 taaacctaacattgttgccctaattccaactaatatttaacctaaaaaattatagctatttttctctccttcaaaacctaaccatatttcctaattcccc 7891285  T
Q  202 tcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacc 249  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||    
T  7891286 tcctccaaaccctaaccatgatttcctaatttccctcctcttaaaacc 7891333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 102 - 283
Target Start/End: Original strand, 13927069 - 13927242
Alignment:
Q  102 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccc 201  Q
    ||||||||||||||||||||||||| |||||||||||||| |||| |||||||||| ||||| || |||||||||||||||| ||||||||||||| |||    
T  13927069 taaacctaacattgttgccctaatttcacctaatatttaacctaaaaaattgtagccactttccc-tccttcaaaacctaactatatttcctaatttccc 13927167  T
Q  202 tcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattgatttccatcttttcttttgccata 283  Q
    ||||||||||| ||||||||||||||||||||| ||||| ||||||||||       ||||||||| |||||||||||||||    
T  13927168 tcctccaaaccttaaccatgatttcctaatttccctcctgctaaaaccta-------gatttccatattttcttttgccata 13927242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 151 - 283
Target Start/End: Complemental strand, 3061677 - 3061545
Alignment:
Q  151 ttgtagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacct 250  Q
    ||||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  3061677 ttgtagccactttttcctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaacct 3061578  T
Q  251 acctaattgatttccatcttttcttttgccata 283  Q
    | ||||||||||||||| |||||| ||||||||    
T  3061577 atctaattgatttccatattttctgttgccata 3061545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 168 - 283
Target Start/End: Original strand, 22004566 - 22004681
Alignment:
Q  168 tccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattgatttccat 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  22004566 tccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacctatctaattgatttccat 22004665  T
Q  268 cttttcttttgccata 283  Q
     |||||| ||||||||    
T  22004666 attttctgttgccata 22004681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 90 - 279
Target Start/End: Original strand, 29954187 - 29954375
Alignment:
Q  90 atctcttattcctaaacctaacattgttgccctaattccacctaatattt-aagctaagaaattgtagctacttttccatccttcaaaacctaaccatat 188  Q
    ||||||||||| |||||  | |||||| | |||||||  ||||||||||| || ||||  ||||||||| |||||||| |||||||||||||||||||||    
T  29954187 atctcttattcttaaacaaagcattgtcgtcctaattatacctaatattttaacctaa--aattgtagccacttttccctccttcaaaacctaaccatat 29954284  T
Q  189 ttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattgatttccatcttttcttttgc 279  Q
    ||| ||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||| |||||| ||||    
T  29954285 ttcataactcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaacctatctaattgatttccatattttctgttgc 29954375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 168 - 283
Target Start/End: Original strand, 7891343 - 7891458
Alignment:
Q  168 tccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattgatttccat 267  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  7891343 tcctttaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacctatctaattgatttccat 7891442  T
Q  268 cttttcttttgccata 283  Q
     |||||| ||||||||    
T  7891443 attttctgttgccata 7891458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 154 - 267
Target Start/End: Complemental strand, 13400780 - 13400667
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |    
T  13400780 tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatc 13400681  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  13400680 taattgatttccat 13400667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 143 - 267
Target Start/End: Original strand, 13927378 - 13927500
Alignment:
Q  143 ctaagaaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcc 242  Q
    |||| ||||||| || ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  13927378 ctaaaaaattgttgccacttttcc--ccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcc 13927475  T
Q  243 taaaacctacctaattgatttccat 267  Q
    |||||| ||||||||||||||||||    
T  13927476 taaaacttacctaattgatttccat 13927500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 5091034 - 5091147
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |    
T  5091034 tagcaactttttcctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatc 5091133  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  5091134 taattgatttccat 5091147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 7890743 - 7890856
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||| |    
T  7890743 tagcaacttttccctccttcaaaacctaaccatatttcctaatttccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatc 7890842  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  7890843 taattgatttccat 7890856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 154 - 263
Target Start/End: Complemental strand, 20959476 - 20959367
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |    
T  20959476 tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatc 20959377  T
Q  254 taattgattt 263  Q
    ||||||||||    
T  20959376 taattgattt 20959367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 154 - 263
Target Start/End: Original strand, 45112713 - 45112822
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |    
T  45112713 tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatc 45112812  T
Q  254 taattgattt 263  Q
    ||||||||||    
T  45112813 taattgattt 45112822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 159 - 260
Target Start/End: Complemental strand, 3600233 - 3600132
Alignment:
Q  159 acttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaatt 258  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  3600233 acttttccctccttcaaaacctaacgatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacctatctaatt 3600134  T
Q  259 ga 260  Q
    ||    
T  3600133 ga 3600132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 7884939 - 7885052
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||||||||| |    
T  7884939 tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactccccctaaaacctatc 7885038  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  7885039 taattgatttccat 7885052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 22003511 - 22003624
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||| |    
T  22003511 tagcaacttttccctccatcaaaacctaaccatatttcctaatttccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatc 22003610  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  22003611 taattgatttccat 22003624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 32656790 - 32656903
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| || ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||| |    
T  32656790 tagcaacttttccctcattcaaaacctaaccatattccctaattcacctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatc 32656889  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  32656890 taattgatttccat 32656903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 148 - 272
Target Start/End: Original strand, 31097951 - 31098075
Alignment:
Q  148 aaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaa 247  Q
    |||||||||| | |||| | |||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||| |||||||||| ||||||||||||    
T  31097951 aaattgtagccattttttcctccttcaaaacctaaccatatttcttaactcccctcctccaaaccctaactatgatctcctaatttccctcctcctaaaa 31098050  T
Q  248 cctacctaattgatttccatctttt 272  Q
    |||| ||||||||||||||| ||||    
T  31098051 cctatctaattgatttccatatttt 31098075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 161 - 246
Target Start/End: Original strand, 5090921 - 5091006
Alignment:
Q  161 ttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaa 246  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  5090921 ttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttcactcctcctaaa 5091006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 185 - 283
Target Start/End: Original strand, 13927271 - 13927369
Alignment:
Q  185 atatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattgatttccatcttttcttttgccata 283  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||| ||| | |||||||||||||||||||||||||| |||||||||||||||    
T  13927271 atatttcctaatttccctcctccaaaccttaaccatgatttcctaatttccctcatgctaaaacctacctaattgatttccatattttcttttgccata 13927369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 93 - 248
Target Start/End: Original strand, 32656629 - 32656784
Alignment:
Q  93 tcttattcctaaacctaacattgttgccctaattcca-cctaatatttaagctaagaaattgtagctacttttccatccttcaaaacctaaccatatttc 191  Q
    ||||||||||||||  | | ||||||||||||||  | |||||||||| | || | | ||| |||| |||||||| |||||||||||||||||||||| |    
T  32656629 tcttattcctaaacaaagctttgttgccctaattttaacctaatattttaactta-atattttagcaacttttccctccttcaaaacctaaccatattcc 32656727  T
Q  192 ctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaac 248  Q
    ||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  32656728 ctaattcacctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaac 32656784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 7889271 - 7889201
Alignment:
Q  159 acttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttccta 229  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  7889271 acttttccctccttcaaaacctaaccatattccctaattcccctcctccaaaccctaaccatgatttccta 7889201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 129 - 210
Target Start/End: Complemental strand, 3600132 - 3600053
Alignment:
Q  129 acctaatatttaagctaagaaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaa 210  Q
    ||||||||||||| ||||  ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  3600132 acctaatatttaacctaa--aattgtagccacttttccttccttcaaaacctaaccatatttcctaattcccctcctccaaa 3600053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 216
Target Start/End: Original strand, 26161861 - 26161987
Alignment:
Q  90 atctcttattcctaaacctaacattgttgccctaattcca-cctaatattt-aagctaagaaattgtagctacttttccatccttcaaaacctaaccata 187  Q
    |||||||||||||||||  | | ||||||||||||||  | |||||||||| || |||| |  || |||| |||||||| ||||||||||||||||||||    
T  26161861 atctcttattcctaaacaaagctttgttgccctaattttaacctaatattttaaactaata--ttttagcaacttttccctccttcaaaacctaaccata 26161958  T
Q  188 tttcctaattcccctcctccaaaccctaa 216  Q
    |||||||||||||||||||||||||||||    
T  26161959 tttcctaattcccctcctccaaaccctaa 26161987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 220
Target Start/End: Original strand, 27712699 - 27712765
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccat 220  Q
    |||| |||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  27712699 tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 27712765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 32035234 - 32035299
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    |||| |||||||| ||||||||||||||||||||||  ||||||||||||||||||||||| ||||    
T  32035234 tagcaacttttccctccttcaaaacctaaccatattctctaattcccctcctccaaaccctcacca 32035299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 13927100 - 13927173
Alignment:
Q  17 aatatttaacctaaaaaattgtagctacttttccctccttcaaaacc-----atatttcctaatttccctcctcc 86  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||     |||||||||||||||||||||||    
T  13927100 aatatttaacctaaaaaattgtagccac-tttccctccttcaaaacctaactatatttcctaatttccctcctcc 13927173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 220
Target Start/End: Original strand, 16719033 - 16719099
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccat 220  Q
    |||| |||||||| || || ||||||||||||||||||||||||| ||||||||||||| |||||||    
T  16719033 tagcaacttttccctcatttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 16719099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 220
Target Start/End: Original strand, 17693243 - 17693309
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccat 220  Q
    |||| |||||||| || || ||||||||||||||||||||||||| ||||||||||||| |||||||    
T  17693243 tagcaacttttccctcatttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 17693309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 22004249 - 22004323
Alignment:
Q  17 aatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 86  Q
    |||||||||||||||||||| |||| |||||||||||||||||     ||||||||||||||||| |||||||||    
T  22004249 aatatttaacctaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattaccctcctcc 22004323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 7891217 - 7891291
Alignment:
Q  17 aatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 86  Q
    |||||||||||||||||||| |||||| ||||| |||||||||     ||||||||||||||||| |||||||||    
T  7891217 aatatttaacctaaaaaattatagctatttttctctccttcaaaacctaaccatatttcctaattcccctcctcc 7891291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 16719118 - 16719156
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16719118 aaccatatttcctaattcccctcctccaaaccctaacca 16719156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 17693328 - 17693366
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    |||||||||||||||||||||||||||||||||||||||    
T  17693328 aaccatatttcctaattcccctcctccaaaccctaacca 17693366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 22004440 - 22004514
Alignment:
Q  17 aatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 86  Q
    ||||||||||| |||||||| |||| |||||||||||||||||     ||||||||||||||||| |||||||||    
T  22004440 aatatttaacccaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc 22004514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 27712784 - 27712822
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27712784 aaccatatttcctaattcccctcctccaaaccctaacca 27712822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 26162195 - 26162249
Alignment:
Q  213 ctaaccatgatttcctaatttctctcctcctaaaacctacctaattgatttccat 267  Q
    ||||| ||||||| |||| ||| |||||||||||||||| |||||||||||||||    
T  26162195 ctaacaatgattttctaacttcgctcctcctaaaacctatctaattgatttccat 26162249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 3600128 - 3600056
Alignment:
Q  17 aatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 86  Q
    ||||||||||||||||  ||||||| |||||||| ||||||||     ||||||||||||||||| |||||||||    
T  3600128 aatatttaacctaaaa--ttgtagccacttttccttccttcaaaacctaaccatatttcctaattcccctcctcc 3600056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 7890992 - 7891030
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  7890992 aaccatatttcctaactcccctcctccaaaccctcacca 7891030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 22003760 - 22003798
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  22003760 aaccatatttcctaactcccctcctccaaaccctcacca 22003798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 22003894 - 22003932
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  22003894 aaccatatttcctaactcccctcctccaaaccctcacca 22003932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 22004028 - 22004066
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  22004028 aaccatatttcctaactcccctcctccaaaccctcacca 22004066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 45112962 - 45113000
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  45112962 aaccatatttcctaactcccctcctccaaaccctcacca 45113000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 7890743 - 7890796
Alignment:
Q  38 tagctacttttccctccttcaaaacc-----atatttcctaatttccctcctcc 86  Q
    |||| |||||||||||||||||||||     |||||||||||||||||||||||    
T  7890743 tagcaacttttccctccttcaaaacctaaccatatttcctaatttccctcctcc 7890796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 191
Target Start/End: Original strand, 7891138 - 7891175
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttc 191  Q
    |||| |||||||| ||||||||||||||||||||||||    
T  7891138 tagcaacttttccctccttcaaaacctaaccatatttc 7891175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 63
Target Start/End: Original strand, 29954243 - 29954275
Alignment:
Q  31 aaaattgtagctacttttccctccttcaaaacc 63  Q
    ||||||||||| |||||||||||||||||||||    
T  29954243 aaaattgtagccacttttccctccttcaaaacc 29954275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 114; Significance: 9e-58; HSPs: 6)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 102 - 251
Target Start/End: Original strand, 41135 - 41284
Alignment:
Q  102 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccc 201  Q
    |||||||||||||||||||||||||||| | ||||||||| | || ||||| |||| |||||||| ||||||||||||||||||||||||||||||||||    
T  41135 taaacctaacattgttgccctaattccaacaaatatttaaccaaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattcccc 41234  T
Q  202 tcctccaaaccctaaccatgatttcctaatttctctcctcctaaaaccta 251  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  41235 tcctccaaaccctaaccatgatttcctaatttccctcctcctaaaaccta 41284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 168 - 283
Target Start/End: Original strand, 41383 - 41498
Alignment:
Q  168 tccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattgatttccat 267  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||    
T  41383 tccttcaaaacctaaccatattttctaattcccctcctccaaaccctaaccatgatttcctaatttccatcctcctaaaacctatctaattgatttccat 41482  T
Q  268 cttttcttttgccata 283  Q
     |||||| ||||||||    
T  41483 attttctgttgccata 41498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 40825 - 40938
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | | |||||||||||||||| |    
T  40825 tagcaacttttccctccatcaaaacctaaccatatttcctaatttccctcctccaaaccctaaccatgatttcctaactccactcctcctaaaacctatc 40924  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  40925 taattgatttccat 40938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 168 - 251
Target Start/End: Original strand, 41292 - 41375
Alignment:
Q  168 tccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaaccta 251  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  41292 tccttcaaaacctaaccatatttcataattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaaccta 41375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 41166 - 41240
Alignment:
Q  17 aatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 86  Q
    ||||||||||| |||||||| |||| |||||||||||||||||     ||||||||||||||||| |||||||||    
T  41166 aatatttaaccaaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc 41240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 40940 - 40978
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  40940 aaccatatttcctaactcccctcctccaaaccctcacca 40978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 5e-44; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 161 - 267
Target Start/End: Complemental strand, 22732289 - 22732183
Alignment:
Q  161 ttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattga 260  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  22732289 ttttccctccttcaaaacctaaccatattccctaattcccctcctccaaaccctaaccatgatttcctaatttcactcctcctaaaacctatctaattga 22732190  T
Q  261 tttccat 267  Q
    |||||||    
T  22732189 tttccat 22732183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 18489931 - 18490044
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |    
T  18489931 tagcaacttttccctccttcaaaacctaaccatattccctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatc 18490030  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  18490031 taattgatttccat 18490044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 154 - 263
Target Start/End: Original strand, 19958069 - 19958178
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||| |    
T  19958069 tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaactctaaccatgatttcctaacttcactcctcctaaaacctatc 19958168  T
Q  254 taattgattt 263  Q
    ||||||||||    
T  19958169 taattgattt 19958178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 21637062 - 21637175
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||| |    
T  21637062 tagcaacttttccctccttcaaaacctaaccatattccctaattcctctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatc 21637161  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  21637162 taattgatttccat 21637175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 154 - 263
Target Start/End: Complemental strand, 37985532 - 37985423
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |    
T  37985532 tagcaacttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatc 37985433  T
Q  254 taattgattt 263  Q
    ||||||||||    
T  37985432 taattgattt 37985423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 24014202 - 24014094
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||| |    
T  24014202 tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatcatttcctaacttcactcctcctaaaacctatc 24014103  T
Q  254 taattgatt 262  Q
    |||||||||    
T  24014102 taattgatt 24014094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 161 - 267
Target Start/End: Complemental strand, 24011291 - 24011185
Alignment:
Q  161 ttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattga 260  Q
    |||||| |||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||    
T  24011291 ttttccctccttcaaaatctaaccatatttcataattctcctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattga 24011192  T
Q  261 tttccat 267  Q
    |||||||    
T  24011191 tttccat 24011185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 178 - 267
Target Start/End: Complemental strand, 41377874 - 41377785
Alignment:
Q  178 cctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacctaattgatttccat 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||    
T  41377874 cctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccat 41377785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 148 - 283
Target Start/End: Complemental strand, 18489863 - 18489718
Alignment:
Q  148 aaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccc----------taaccatgatttcctaatttctct 237  Q
    |||||||||  |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||          |||||||||| |||||||||| ||    
T  18489863 aaattgtagtcacttttccctccttcaaaacataaccatatttcctaattcccctcctccaaaccctaacaaaccctaaccatgatctcctaatttccct 18489764  T
Q  238 cctcctaaaacctacctaattgatttccatcttttcttttgccata 283  Q
    ||||||||||| || ||||||||||||||| |||||| ||||||||    
T  18489763 cctcctaaaacgtatctaattgatttccatattttctgttgccata 18489718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 18278617 - 18278552
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18278617 tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaacca 18278552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 410164 - 410098
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccat 220  Q
    |||| |||||||| ||||| ||||||||| ||||||||||||||| |||||||||||||||||||||    
T  410164 tagcaacttttccctcctttaaaacctaagcatatttcctaattctcctcctccaaaccctaaccat 410098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 410079 - 410041
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    |||||||||||||||||||||||||||||||||||||||    
T  410079 aaccatatttcctaattcccctcctccaaaccctaacca 410041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 37985634 - 37985586
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccct 202  Q
    |||| |||||||| |||||||||||||||| ||||||||||||||||||    
T  37985634 tagcaacttttccctccttcaaaacctaacaatatttcctaattcccct 37985586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 19958318 - 19958356
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  19958318 aaccatatttcctaactcccctcctccaaaccctcacca 19958356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 18489864 - 18489804
Alignment:
Q  31 aaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 86  Q
    ||||||||||  |||||||||||||||||     ||||||||||||||||| |||||||||    
T  18489864 aaaattgtagtcacttttccctccttcaaaacataaccatatttcctaattcccctcctcc 18489804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1113 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold1113
Description:

Target: scaffold1113; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 145 - 267
Target Start/End: Complemental strand, 2573 - 2451
Alignment:
Q  145 aagaaattgtagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctccta 244  Q
    |||| ||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| || ||||||    
T  2573 aagatattttagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctctaaaccctaaccatgatttcctaacttcacttctccta 2474  T
Q  245 aaacctacctaattgatttccat 267  Q
    ||||||| |||||||||||||||    
T  2473 aaacctatctaattgatttccat 2451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 154 - 267
Target Start/End: Complemental strand, 44720 - 44607
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttctctcctcctaaaacctacc 253  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||||||||| |    
T  44720 tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactccccctaaaacctatc 44621  T
Q  254 taattgatttccat 267  Q
    ||||||||||||||    
T  44620 taattgatttccat 44607  T

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Target: scaffold0642 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0642
Description:

Target: scaffold0642; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 154 - 220
Target Start/End: Original strand, 303 - 369
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccat 220  Q
    |||| |||||||| ||||| ||||||||||||||||||||||||| ||||||||||||| |||||||    
T  303 tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 369  T

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Target: scaffold0642; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 388 - 426
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    |||||||||||||||||||||||||||||||||||||||    
T  388 aaccatatttcctaattcccctcctccaaaccctaacca 426  T

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Target: scaffold0374 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 173 - 107
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccat 220  Q
    |||| |||||||| ||||| ||||||||| ||||||||||||||| |||||||||||||||||||||    
T  173 tagcaacttttccctcctttaaaacctaagcatatttcctaattctcctcctccaaaccctaaccat 107  T

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Target: scaffold0374; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 88 - 50
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    |||||||||||||||||||||||||||||||||||||||    
T  88 aaccatatttcctaattcccctcctccaaaccctaacca 50  T

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Target: scaffold0345 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 154 - 220
Target Start/End: Original strand, 10214 - 10280
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccat 220  Q
    |||| |||||||| ||||| ||||||||||||||||||||||||| ||||||||||||| |||||||    
T  10214 tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 10280  T

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Target: scaffold0345; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 10299 - 10337
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    |||||||||||||||||||||||||||||||||||||||    
T  10299 aaccatatttcctaattcccctcctccaaaccctaacca 10337  T

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Target: scaffold0105 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 28766 - 28700
Alignment:
Q  154 tagctacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccat 220  Q
    |||| |||||||| ||||| ||||||||||||||||||||||||| ||||||||||||| |||||||    
T  28766 tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 28700  T

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Target: scaffold0105; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 28681 - 28643
Alignment:
Q  181 aaccatatttcctaattcccctcctccaaaccctaacca 219  Q
    |||||||||||||||||||||||||||||||||||||||    
T  28681 aaccatatttcctaattcccctcctccaaaccctaacca 28643  T

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Target: scaffold0119 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 29273 - 29223
Alignment:
Q  114 tgttgccctaattccacctaatatttaagctaagaaattgtagctactttt 164  Q
    |||||||||||||||||||||||||||| |||| |||||||||| ||||||    
T  29273 tgttgccctaattccacctaatatttaacctaaaaaattgtagccactttt 29223  T

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Target: scaffold0119; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 35526 - 35476
Alignment:
Q  114 tgttgccctaattccacctaatatttaagctaagaaattgtagctactttt 164  Q
    |||||||||||||||||||||||||||| |||| |||||||||| ||||||    
T  35526 tgttgccctaattccacctaatatttaacctaaaaaattgtagccactttt 35476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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