View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15523_low_41 (Length: 284)

Name: NF15523_low_41
Description: NF15523
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15523_low_41
NF15523_low_41
[»] chr7 (7 HSPs)
chr7 (1-268)||(14661501-14661768)
chr7 (19-268)||(14653066-14653315)
chr7 (1-268)||(14757647-14757917)
chr7 (101-267)||(14749831-14749997)
chr7 (122-268)||(14764931-14765077)
chr7 (1-54)||(14749761-14749814)
chr7 (26-82)||(14764835-14764891)
[»] chr5 (6 HSPs)
chr5 (1-268)||(17683493-17683760)
chr5 (19-268)||(17690437-17690686)
chr5 (1-268)||(17570618-17570888)
chr5 (126-267)||(17621824-17621965)
chr5 (26-268)||(17563522-17563764)
chr5 (4-62)||(17621733-17621791)
[»] chr1 (4 HSPs)
chr1 (8-268)||(15195914-15196174)
chr1 (8-268)||(15216332-15216592)
chr1 (8-268)||(15195263-15195523)
chr1 (8-268)||(15215681-15215941)
[»] chr8 (1 HSPs)
chr8 (153-262)||(24395382-24395491)


Alignment Details
Target: chr7 (Bit Score: 256; Significance: 1e-142; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 14661768 - 14661501
Alignment:
Q  1 ttgtcgtatttatccttgtcatccaagagcctctgcaaaaattcaacaggatcctccaacctctttggatcagtaacaagcttgtcaacggacactcgaa 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14661768 ttgtcgtatttatctttgtcatccaagagcctctgcaaaaattcaacaggatcctccaacctctttggatcagtaacaagcttgtcaacggacactcgaa 14661669  T
Q  101 tgtgtgagatcatcgcttcttgtatttttgagagaccatcaggaacacgactgaacaagttatacattctttccaaatcttcatatttattaccacaaag 200  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14661668 tgtgtgagatcatcgcttcttgtatttttaagagaccatcaggaacacgacggaacaagttatacattctttccaaatcttcatatttattaccacaaag 14661569  T
Q  201 catgtttacaaacccagagttctccatattgattaatctcagcatgggattttcaatcatctccttct 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14661568 catgtttacaaacccagagttctccatattgattaatctcagcatgggattttcaatcatctccttct 14661501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 19 - 268
Target Start/End: Complemental strand, 14653315 - 14653066
Alignment:
Q  19 tcatccaagagcctctgcaaaaattcaacaggatcctccaacctctttggatcagtaacaagcttgtcaacggacactcgaatgtgtgagatcatcgctt 118  Q
    |||||||||||||||  |||||||| |||||||||||  | ||| |||||||||||||||||||||| ||| |||||||||||||||||||||||| |||    
T  14653315 tcatccaagagcctccacaaaaattgaacaggatccttaaccctttttggatcagtaacaagcttgttaacagacactcgaatgtgtgagatcatcactt 14653216  T
Q  119 cttgtatttttgagagaccatcaggaacacgactgaacaagttatacattctttccaaatcttcatatttattaccacaaagcatgtttacaaacccaga 218  Q
    ||| ||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  14653215 cttttatttttgagagaccattaggaacacgtcggaacaagttatacattctttccaaatcttcatatttagtaccacaaagcatgtttacaaacccaga 14653116  T
Q  219 gttctccatattgattaatctcagcatgggattttcaatcatctccttct 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14653115 gttctccatattgattaatctcagcatgggattttcaatcatctccttct 14653066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 14757647 - 14757917
Alignment:
Q  1 ttgtcgtatttatccttgtcatccaagagcctctgcaaaaattcaacagga---tcctccaacctctttggatcagtaacaagct-tgtcaacggacact 96  Q
    ||||| |||||||| || ||||| || | |||||||| |||||||||| ||   || |||||||| | | ||||||||| ||||| | |||| |||| ||    
T  14757647 ttgtcatatttatctttctcatctaacaacctctgcacaaattcaacatgaatatcatccaacctttctagatcagtaagaagctgtttcaa-ggactct 14757745  T
Q  97 cgaatgtgtgagatcatcgcttcttgtatttttgagagaccatcaggaacacgactgaacaagttatacattctttccaaatcttcatatttattaccac 196  Q
    |  ||||||||  || || ||||  ||||||| |||||||||| || ||||||||  |||||||||||||||||| |||||||||||||||||| |||||    
T  14757746 ctgatgtgtgaagtcgtcacttcacgtattttcgagagaccattagtaacacgacgaaacaagttatacattcttcccaaatcttcatatttatcaccac 14757845  T
Q  197 aaagcatgtttacaaacccagagttctccatattgattaatctcagcatgggattttcaatcatctccttct 268  Q
    ||||||||||||| ||||| ||||||||||||| ||||||||| |||||| |||||||||||||||||||||    
T  14757846 aaagcatgtttactaaccccgagttctccatatggattaatctaagcatgtgattttcaatcatctccttct 14757917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 101 - 267
Target Start/End: Original strand, 14749831 - 14749997
Alignment:
Q  101 tgtgtgagatcatcgcttcttgtatttttgagagaccatcaggaacacgactgaacaagttatacattctttccaaatcttcatatttattaccacaaag 200  Q
    |||||||  ||||| ||||  |||||||  ||||||||||||||||||||  ||||||||||||||||||  ||||||| | |||||||| |||||||||    
T  14749831 tgtgtgaagtcatcacttcacgtattttcaagagaccatcaggaacacgatggaacaagttatacattctacccaaatcgttatatttatcaccacaaag 14749930  T
Q  201 catgtttacaaacccagagttctccatattgattaatctcagcatgggattttcaatcatctccttc 267  Q
    ||||||||| |||||||| |||| ||  | ||||||||| |||||| ||||||||||  ||||||||    
T  14749931 catgtttactaacccagaattctgcaattggattaatctaagcatgtgattttcaatagtctccttc 14749997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 122 - 268
Target Start/End: Original strand, 14764931 - 14765077
Alignment:
Q  122 gtatttttgagagaccatcaggaacacgactgaacaagttatacattctttccaaatcttcatatttattaccacaaagcatgtttacaaacccagagtt 221  Q
    |||||||  |||||||||| |  ||||||||||||||||||||||| ||  |||||||||||||||||| | ||| |||||||||||| ||||||||  |    
T  14764931 gtattttcaagagaccatcggtgacacgactgaacaagttatacatcctacccaaatcttcatatttatcatcaccaagcatgtttactaacccagaagt 14765030  T
Q  222 ctccatattgattaatctcagcatgggattttcaatcatctccttct 268  Q
    |||| ||| ||||||||| |||||| ||||||| | |||||||||||    
T  14765031 ctccttatagattaatctaagcatgtgattttcgagcatctccttct 14765077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 14749761 - 14749814
Alignment:
Q  1 ttgtcgtatttatccttgtcatccaagagcctctgcaaaaattcaacaggatcc 54  Q
    |||||||||||||| || ||||||||||||||||||| ||||||||||||||||    
T  14749761 ttgtcgtatttatctttctcatccaagagcctctgcacaaattcaacaggatcc 14749814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 14764835 - 14764891
Alignment:
Q  26 agagcctctgcaaaaattcaacaggatcctccaacctctttggatcagtaacaagct 82  Q
    |||||||||||| ||||||||||||||||| |||||| |  ||||||||||||||||    
T  14764835 agagcctctgcacaaattcaacaggatccttcaacctttcaggatcagtaacaagct 14764891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 252; Significance: 1e-140; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 17683493 - 17683760
Alignment:
Q  1 ttgtcgtatttatccttgtcatccaagagcctctgcaaaaattcaacaggatcctccaacctctttggatcagtaacaagcttgtcaacggacactcgaa 100  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17683493 ttgtcgtatttatctttgtcatccaatagcctctgcaaaaattcaacaggatcctccaacctctttggatcagtaacaagcttgtcaacggacactcgaa 17683592  T
Q  101 tgtgtgagatcatcgcttcttgtatttttgagagaccatcaggaacacgactgaacaagttatacattctttccaaatcttcatatttattaccacaaag 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  17683593 tgtgtgagatcatcgcttcttgtatttttgagagaccatcaggaacccgacggaacaagttatacattctttccaaatcttcatatttattaccacaaag 17683692  T
Q  201 catgtttacaaacccagagttctccatattgattaatctcagcatgggattttcaatcatctccttct 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17683693 catgtttacaaacccagagttctccatattgattaatctcagcatgggattttcaatcatctccttct 17683760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 19 - 268
Target Start/End: Original strand, 17690437 - 17690686
Alignment:
Q  19 tcatccaagagcctctgcaaaaattcaacaggatcctccaacctctttggatcagtaacaagcttgtcaacggacactcgaatgtgtgagatcatcgctt 118  Q
    |||||||||||||||  |||||||| ||||||||||| |||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||| | |    
T  17690437 tcatccaagagcctccacaaaaattgaacaggatccttcaacctttttggatcaataacaagcttgttaacggacactcgaatgtgtgagatcatcacgt 17690536  T
Q  119 cttgtatttttgagagaccatcaggaacacgactgaacaagttatacattctttccaaatcttcatatttattaccacaaagcatgtttacaaacccaga 218  Q
    ||| ||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  17690537 cttttatttttgagagaccattaggaacacgtcggaacaagttatacattctttccaaatcttcatatttagtaccacaaatcatgtttacaaacccaga 17690636  T
Q  219 gttctccatattgattaatctcagcatgggattttcaatcatctccttct 268  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||    
T  17690637 gttctccatattgattaatctaggcatgggattttcaatcatctccttct 17690686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 17570888 - 17570618
Alignment:
Q  1 ttgtcgtatttatccttgtcatccaagagcctctgcaaaaattcaacagga---tcctccaacctctttggatcagtaacaagct-tgtcaacggacact 96  Q
    ||||| |||||||| || ||||| || | |||||||| |||||||||| ||   || |||||||| | | ||||||||| ||||| | |||| |||| ||    
T  17570888 ttgtcatatttatctttctcatctaacaacctctgcacaaattcaacatgaatatcatccaacctttctagatcagtaagaagctgtttcaa-ggactct 17570790  T
Q  97 cgaatgtgtgagatcatcgcttcttgtatttttgagagaccatcaggaacacgactgaacaagttatacattctttccaaatcttcatatttattaccac 196  Q
    |  ||||||||  || || ||||  ||||||| |||||||||| || ||||||||  |||||||||||||||||| |||||||||||||||||| |||||    
T  17570789 ctgatgtgtgaagtcgtcacttcacgtattttcgagagaccattagtaacacgacgaaacaagttatacattcttcccaaatcttcatatttatcaccac 17570690  T
Q  197 aaagcatgtttacaaacccagagttctccatattgattaatctcagcatgggattttcaatcatctccttct 268  Q
    ||||||||||||| ||||| ||||||||||||| ||||||||| |||||| |||||||||||||||||||||    
T  17570689 aaagcatgtttactaaccccgagttctccatatggattaatctaagcatgtgattttcaatcatctccttct 17570618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 126 - 267
Target Start/End: Original strand, 17621824 - 17621965
Alignment:
Q  126 ttttgagagaccatcaggaacacgactgaacaagttatacattctttccaaatcttcatatttattaccacaaagcatgtttacaaacccagagttctcc 225  Q
    |||| ||||| ||||||||||||||| ||||||||||||||||||  |||| ||||||||||||| |||||||| ||||||||| |||||||| || |||    
T  17621824 tttttagagaacatcaggaacacgacggaacaagttatacattctacccaagtcttcatatttatcaccacaaatcatgtttactaacccagaattttcc 17621923  T
Q  226 atattgattaatctcagcatgggattttcaatcatctccttc 267  Q
    |||| ||||||||| ||||||  ||||||||| |||||||||    
T  17621924 atatggattaatctaagcatgtcattttcaataatctccttc 17621965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 26 - 268
Target Start/End: Complemental strand, 17563764 - 17563522
Alignment:
Q  26 agagcctctgcaaaaattcaacaggatcctccaacctctttggatcagtaacaagcttgtcaacggacactcgaatgtgtgagatcatcgcttcttgtat 125  Q
    |||||||||||| ||||||||||||||||| |||||| |  ||||||||||||||||  | | ||    ||   | || |||  ||||| ||||  ||||    
T  17563764 agagcctctgcacaaattcaacaggatccttcaacctttcaggatcagtaacaagctgcttaccgtggtctttgacgtatgaagtcatcacttcacgtat 17563665  T
Q  126 ttttgagagaccatcaggaacacgactgaacaagttatacattctttccaaatcttcatatttattaccacaaagcatgtttacaaacccagagttctcc 225  Q
    |||  |||||||||| |  ||||||||||||||||||||||| ||  |||||||||||||||||| | ||| |||||||||||| ||||||||  |||||    
T  17563664 tttcaagagaccatcggtgacacgactgaacaagttatacatcctacccaaatcttcatatttatcatcaccaagcatgtttactaacccagaagtctcc 17563565  T
Q  226 atattgattaatctcagcatgggattttcaatcatctccttct 268  Q
     ||| ||||||||| |||||| ||||||| | |||||||||||    
T  17563564 ttatagattaatctaagcatgtgattttcgagcatctccttct 17563522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 17621733 - 17621791
Alignment:
Q  4 tcgtatttatccttgtcatccaagagcctctgcaaaaattcaacaggatcctccaacct 62  Q
    ||||||||||| || ||||| |||||| |||||| | ||||||||||||||| ||||||    
T  17621733 tcgtatttatctttctcatctaagagcttctgcacatattcaacaggatccttcaacct 17621791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 4e-38; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 8 - 268
Target Start/End: Original strand, 15195914 - 15196174
Alignment:
Q  8 atttatccttgtcatccaagagcctctgcaaaaattcaacaggatcctccaacctctttggatcagtaacaagcttgtcaacggacactcgaatgtgtga 107  Q
    ||||||| || ||||| ||||||||||||| ||||||||| |||| || |||||| | |||| ||||||||||||  | | |  |  ||| ||||| |||    
T  15195914 atttatctttctcatctaagagcctctgcacaaattcaaccggattcttcaacctttctggaccagtaacaagctgcttaccatagtctctaatgtatga 15196013  T
Q  108 gatcatcgcttcttgtatttttgagagaccatcaggaacacgactgaacaagttatacattctttccaaatcttcatatttattaccacaaagcatgttt 207  Q
      ||||| ||||| ||||||  ||||||||| | |  ||||||| ||||||||||||||||||   |||||||| ||| |||| | ||| || |||||||    
T  15196014 agtcatcacttctcgtatttgcgagagaccaccggtgacacgacggaacaagttatacattctaatcaaatctttatacttatcatcaccaatcatgttt 15196113  T
Q  208 acaaacccagagttctccatattgattaatctcagcatgggattttcaatcatctccttct 268  Q
    || ||||||||||||||||||| ||||||||| |||||| ||||||| |||||||||||||    
T  15196114 actaacccagagttctccatatggattaatctaagcatgtgattttcgatcatctccttct 15196174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 8 - 268
Target Start/End: Original strand, 15216332 - 15216592
Alignment:
Q  8 atttatccttgtcatccaagagcctctgcaaaaattcaacaggatcctccaacctctttggatcagtaacaagcttgtcaacggacactcgaatgtgtga 107  Q
    ||||||| || ||||| ||||||||||||| ||||||||| |||| || |||||| | |||| ||||||||||||  | | |  |  ||| ||||| |||    
T  15216332 atttatctttctcatctaagagcctctgcacaaattcaaccggattcttcaacctttctggaccagtaacaagctgcttaccatagtctctaatgtatga 15216431  T
Q  108 gatcatcgcttcttgtatttttgagagaccatcaggaacacgactgaacaagttatacattctttccaaatcttcatatttattaccacaaagcatgttt 207  Q
      ||||| ||||| ||||||  ||||||||| | |  ||||||| ||||||||||||||||||   |||||||| ||| |||| | ||| || |||||||    
T  15216432 agtcatcacttctcgtatttgcgagagaccaccggtgacacgacggaacaagttatacattctaatcaaatctttatacttatcatcaccaatcatgttt 15216531  T
Q  208 acaaacccagagttctccatattgattaatctcagcatgggattttcaatcatctccttct 268  Q
    || ||||||||||||||||||| ||||||||| |||||| ||||||| |||||||||||||    
T  15216532 actaacccagagttctccatatggattaatctaagcatgtgattttcgatcatctccttct 15216592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 268
Target Start/End: Original strand, 15195263 - 15195523
Alignment:
Q  8 atttatccttgtcatccaagagcctctgcaaaaattcaacaggatcctccaacctctttggatcagtaacaagcttgtcaacggacactcgaatgtgtga 107  Q
    ||||||| || ||||| || |||||||||| ||||||||| |||| || |||||| | |||||||||||||||||  | |  | |  ||| ||||| |||    
T  15195263 atttatctttctcatctaaaagcctctgcacaaattcaaccggattcttcaacctttctggatcagtaacaagctgcttactgtagtctctaatgtatga 15195362  T
Q  108 gatcatcgcttcttgtatttttgagagaccatcaggaacacgactgaacaagttatacattctttccaaatcttcatatttattaccacaaagcatgttt 207  Q
      | ||| ||||| ||||||  ||||||||| | |  ||||||| ||||||||||||||||||   |||||||||||| |||| | ||| || |||||||    
T  15195363 agtaatcacttctcgtatttgcgagagaccaccggtgacacgacggaacaagttatacattctactcaaatcttcatacttatcatcaccaatcatgttt 15195462  T
Q  208 acaaacccagagttctccatattgattaatctcagcatgggattttcaatcatctccttct 268  Q
    || ||||||||||||||||||  ||||||||| | |||| ||||||| |||||||||||||    
T  15195463 actaacccagagttctccataaggattaatctaatcatgtgattttcgatcatctccttct 15195523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 268
Target Start/End: Original strand, 15215681 - 15215941
Alignment:
Q  8 atttatccttgtcatccaagagcctctgcaaaaattcaacaggatcctccaacctctttggatcagtaacaagcttgtcaacggacactcgaatgtgtga 107  Q
    ||||||| || ||||| || |||||||||| ||||||||| |||| || |||||| | |||||||||||||||||  | |  | |  ||| ||||| |||    
T  15215681 atttatctttctcatctaaaagcctctgcacaaattcaaccggattcttcaacctttctggatcagtaacaagctgcttactgtagtctctaatgtatga 15215780  T
Q  108 gatcatcgcttcttgtatttttgagagaccatcaggaacacgactgaacaagttatacattctttccaaatcttcatatttattaccacaaagcatgttt 207  Q
      | ||| ||||| ||||||  ||||||||| | |  ||||||| ||||||||||||||||||   |||||||||||| |||| | ||| || |||||||    
T  15215781 agtaatcacttctcgtatttgcgagagaccaccggtgacacgacggaacaagttatacattctactcaaatcttcatacttatcatcaccaatcatgttt 15215880  T
Q  208 acaaacccagagttctccatattgattaatctcagcatgggattttcaatcatctccttct 268  Q
    || ||||||||||||||||||  ||||||||| | |||| ||||||| |||||||||||||    
T  15215881 actaacccagagttctccataaggattaatctaatcatgtgattttcgatcatctccttct 15215941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 153 - 262
Target Start/End: Original strand, 24395382 - 24395491
Alignment:
Q  153 gaacaagttatacattctttccaaatcttcatatttattaccacaaagcatgtttacaaacccagagttctccatattgattaatctcagcatgggattt 252  Q
    ||||||||||||||| ||  |||||||||||||||||| | ||||||||||||| || || ||||| |||||||||| |||||| || |||||| |||||    
T  24395382 gaacaagttatacatcctacccaaatcttcatatttatcatcacaaagcatgttgactaaaccagaattctccatatggattaacctgagcatgtgattt 24395481  T
Q  253 tcaatcatct 262  Q
    ||||||||||    
T  24395482 tcaatcatct 24395491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University