View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15524_low_12 (Length: 234)
Name: NF15524_low_12
Description: NF15524
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15524_low_12 |
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Alignment Details
Target: chr5 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 19 - 222
Target Start/End: Original strand, 7715811 - 7716014
Alignment:
| Q |
19 |
ataattgtgttgtttgttttatactactccacatgacatttctaataaaaatatgttgaatacatttgcatgcatgcagtataagaaatccttccacgat |
118 |
Q |
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| T |
7715811 |
ataattgtgttgtttgttttatactactccacatgacatttctaataaaaatatgttgaatacatttgcatgcatgcagtataagaaatccttccacgat |
7715910 |
T |
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| Q |
119 |
acccacgtggcatcttggtatatgttatttttgtgtagcactttggttgatgatattatagaatttggatcctttgatttttctttctccttcttctccc |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7715911 |
acccacgtggcatcttggtatatgttatttttgtgtagcactttggttgatgatattatagaatttggatcctttgatttttctttctccttcttctccc |
7716010 |
T |
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| Q |
219 |
tatg |
222 |
Q |
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|||| |
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| T |
7716011 |
tatg |
7716014 |
T |
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