View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15525_high_14 (Length: 218)

Name: NF15525_high_14
Description: NF15525
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15525_high_14
NF15525_high_14
[»] scaffold1867 (1 HSPs)
scaffold1867 (1-202)||(88-289)
[»] chr7 (45 HSPs)
chr7 (1-218)||(7284146-7284363)
chr7 (31-218)||(11287390-11287578)
chr7 (66-207)||(15822528-15822669)
chr7 (39-218)||(26070350-26070530)
chr7 (39-218)||(26094137-26094317)
chr7 (63-200)||(12758993-12759130)
chr7 (39-197)||(39046731-39046889)
chr7 (63-200)||(45452272-45452407)
chr7 (31-202)||(12248222-12248395)
chr7 (63-218)||(16570091-16570247)
chr7 (63-218)||(16595415-16595571)
chr7 (67-200)||(3895035-3895168)
chr7 (63-200)||(12369944-12370081)
chr7 (63-200)||(47289788-47289924)
chr7 (63-207)||(49047771-49047915)
chr7 (10-191)||(126366-126549)
chr7 (24-192)||(13274753-13274923)
chr7 (39-191)||(111390-111542)
chr7 (63-200)||(143652-143782)
chr7 (63-200)||(44865234-44865373)
chr7 (67-191)||(3049593-3049717)
chr7 (67-191)||(2190307-2190431)
chr7 (39-197)||(35094798-35094956)
chr7 (19-191)||(32494167-32494341)
chr7 (67-191)||(2028931-2029055)
chr7 (67-191)||(42056410-42056534)
chr7 (23-184)||(17224058-17224220)
chr7 (63-176)||(13377535-13377648)
chr7 (16-166)||(16915066-16915217)
chr7 (80-200)||(13863033-13863154)
chr7 (16-166)||(48356602-48356753)
chr7 (2-141)||(14272049-14272189)
chr7 (63-184)||(31501179-31501300)
chr7 (82-166)||(9611332-9611416)
chr7 (82-166)||(9838904-9838988)
chr7 (75-189)||(13321033-13321148)
chr7 (16-166)||(34241326-34241477)
chr7 (23-112)||(1937200-1937290)
chr7 (63-164)||(4484733-4484834)
chr7 (63-184)||(20583674-20583795)
chr7 (96-184)||(16919598-16919686)
chr7 (80-167)||(25124153-25124238)
chr7 (83-184)||(46474027-46474128)
chr7 (80-184)||(9723927-9724031)
chr7 (80-184)||(17947712-17947816)
[»] scaffold0310 (3 HSPs)
scaffold0310 (1-218)||(200-417)
scaffold0310 (100-218)||(6494-6612)
scaffold0310 (1-64)||(6603-6666)
[»] scaffold0120 (2 HSPs)
scaffold0120 (1-218)||(21455-21673)
scaffold0120 (1-218)||(31154-31372)
[»] scaffold0158 (2 HSPs)
scaffold0158 (1-202)||(24903-25103)
scaffold0158 (58-202)||(25213-25356)
[»] scaffold0833 (1 HSPs)
scaffold0833 (1-165)||(3243-3407)
[»] chr6 (39 HSPs)
chr6 (39-218)||(31628249-31628429)
chr6 (70-202)||(18432656-18432788)
chr6 (1-191)||(18583277-18583451)
chr6 (63-200)||(16086023-16086160)
chr6 (66-200)||(32898799-32898933)
chr6 (63-199)||(22440941-22441076)
chr6 (1-135)||(18823565-18823699)
chr6 (1-135)||(18839420-18839554)
chr6 (23-191)||(35015278-35015447)
chr6 (63-200)||(16106527-16106659)
chr6 (10-194)||(18398890-18399076)
chr6 (63-199)||(13014814-13014949)
chr6 (58-191)||(26089736-26089869)
chr6 (67-200)||(18777156-18777289)
chr6 (69-186)||(25744331-25744448)
chr6 (23-184)||(18381803-18381965)
chr6 (67-200)||(18570289-18570422)
chr6 (31-218)||(25367323-25367511)
chr6 (67-191)||(23994933-23995057)
chr6 (58-191)||(18002617-18002750)
chr6 (23-191)||(19983412-19983581)
chr6 (67-191)||(15742341-15742468)
chr6 (16-184)||(22361885-22362054)
chr6 (74-194)||(28195202-28195324)
chr6 (62-166)||(25651242-25651346)
chr6 (1-135)||(4991015-4991150)
chr6 (63-166)||(25919619-25919722)
chr6 (65-191)||(33324701-33324828)
chr6 (65-191)||(35136124-35136251)
chr6 (63-184)||(21623174-21623295)
chr6 (65-189)||(35009569-35009692)
chr6 (1-109)||(17083373-17083483)
chr6 (80-191)||(15079820-15079932)
chr6 (27-166)||(33538507-33538647)
chr6 (80-184)||(34966890-34966994)
chr6 (65-191)||(16887904-16888031)
chr6 (115-166)||(17083335-17083386)
chr6 (121-187)||(29665938-29666004)
chr6 (125-189)||(27740907-27740971)
[»] chr4 (43 HSPs)
chr4 (23-200)||(34395222-34395400)
chr4 (39-218)||(16732150-16732330)
chr4 (63-217)||(45458942-45459096)
chr4 (66-200)||(23270038-23270172)
chr4 (66-200)||(44055924-44056058)
chr4 (67-200)||(21959567-21959700)
chr4 (63-200)||(820020-820153)
chr4 (63-197)||(55376704-55376838)
chr4 (63-218)||(12837286-12837441)
chr4 (79-200)||(30457925-30458046)
chr4 (24-218)||(13809596-13809791)
chr4 (69-197)||(53704840-53704968)
chr4 (10-191)||(14951713-14951896)
chr4 (69-197)||(53907806-53907931)
chr4 (67-197)||(30232603-30232733)
chr4 (69-197)||(44346839-44346967)
chr4 (79-197)||(8872578-8872699)
chr4 (23-191)||(25119328-25119498)
chr4 (23-191)||(5682648-5682817)
chr4 (67-191)||(15272433-15272557)
chr4 (63-218)||(52265594-52265749)
chr4 (31-207)||(18494425-18494602)
chr4 (70-207)||(27960984-27961121)
chr4 (63-184)||(15044834-15044955)
chr4 (63-176)||(15109477-15109590)
chr4 (1-135)||(16522761-16522896)
chr4 (16-166)||(19821914-19822065)
chr4 (23-184)||(41166066-41166228)
chr4 (16-166)||(37957163-37957314)
chr4 (1-135)||(9295637-9295772)
chr4 (115-189)||(10104380-10104454)
chr4 (1-166)||(7185982-7186146)
chr4 (23-194)||(14901197-14901370)
chr4 (80-189)||(15675219-15675328)
chr4 (63-164)||(18276440-18276541)
chr4 (115-194)||(47535174-47535254)
chr4 (80-191)||(31115653-31115764)
chr4 (115-197)||(40885676-40885758)
chr4 (63-184)||(38764715-38764836)
chr4 (80-184)||(18238277-18238381)
chr4 (63-165)||(15013421-15013523)
chr4 (80-166)||(54398406-54398492)
chr4 (80-184)||(13590194-13590298)
[»] scaffold0190 (1 HSPs)
scaffold0190 (24-202)||(9903-10082)
[»] scaffold0012 (1 HSPs)
scaffold0012 (23-218)||(253075-253271)
[»] chr3 (66 HSPs)
chr3 (1-191)||(33341825-33342015)
chr3 (63-200)||(14298427-14298564)
chr3 (63-200)||(14304054-14304191)
chr3 (63-200)||(35123702-35123839)
chr3 (1-191)||(7853926-7854116)
chr3 (1-191)||(54685422-54685612)
chr3 (63-200)||(53898559-53898696)
chr3 (66-200)||(50112155-50112289)
chr3 (67-215)||(12349628-12349781)
chr3 (39-218)||(14295419-14295600)
chr3 (68-215)||(8631801-8631948)
chr3 (1-135)||(19946642-19946776)
chr3 (66-200)||(22144376-22144510)
chr3 (67-200)||(6154435-6154567)
chr3 (65-218)||(17938582-17938735)
chr3 (39-194)||(19570798-19570953)
chr3 (63-218)||(54424018-54424173)
chr3 (63-200)||(12349834-12349970)
chr3 (19-207)||(17522986-17523176)
chr3 (63-200)||(6146850-6146986)
chr3 (63-218)||(11329047-11329202)
chr3 (69-197)||(16996166-16996294)
chr3 (69-194)||(13817527-13817649)
chr3 (63-217)||(17139514-17139668)
chr3 (66-218)||(14301074-14301227)
chr3 (31-197)||(14528118-14528286)
chr3 (10-191)||(30152893-30153076)
chr3 (67-200)||(17100663-17100796)
chr3 (67-200)||(17101348-17101481)
chr3 (77-197)||(317615-317735)
chr3 (48-197)||(16182052-16182202)
chr3 (23-187)||(17956109-17956274)
chr3 (67-191)||(3992560-3992684)
chr3 (64-194)||(14059322-14059453)
chr3 (31-202)||(55440950-55441123)
chr3 (67-191)||(2844201-2844325)
chr3 (67-191)||(16261463-16261587)
chr3 (19-191)||(45581591-45581765)
chr3 (63-184)||(12488846-12488967)
chr3 (36-200)||(19260943-19261108)
chr3 (39-191)||(54038245-54038398)
chr3 (67-191)||(38167924-38168048)
chr3 (67-191)||(53771051-53771175)
chr3 (65-218)||(16880131-16880284)
chr3 (63-218)||(11061091-11061247)
chr3 (63-218)||(12560322-12560477)
chr3 (67-191)||(23492383-23492507)
chr3 (1-178)||(47784873-47785051)
chr3 (63-202)||(3578097-3578234)
chr3 (16-166)||(38811146-38811297)
chr3 (63-165)||(15876074-15876176)
chr3 (134-200)||(34439447-34439513)
chr3 (25-178)||(17204667-17204821)
chr3 (25-218)||(17191511-17191702)
chr3 (39-184)||(3576558-3576704)
chr3 (10-166)||(12952915-12953073)
chr3 (87-194)||(39656556-39656664)
chr3 (15-191)||(1990759-1990937)
chr3 (39-104)||(28558187-28558253)
chr3 (1-69)||(9303343-9303412)
chr3 (24-191)||(9590866-9591035)
chr3 (16-162)||(34559857-34560004)
chr3 (63-191)||(14080515-14080644)
chr3 (121-184)||(14814885-14814948)
chr3 (16-166)||(17960451-17960602)
chr3 (80-167)||(51961276-51961361)
[»] chr8 (45 HSPs)
chr8 (63-200)||(20573296-20573433)
chr8 (39-194)||(41246639-41246795)
chr8 (63-202)||(21681008-21681148)
chr8 (63-218)||(20647915-20648070)
chr8 (63-218)||(20653991-20654146)
chr8 (31-191)||(41506930-41507091)
chr8 (67-200)||(20481615-20481748)
chr8 (63-200)||(37611675-37611811)
chr8 (69-197)||(22234910-22235038)
chr8 (39-197)||(19993161-19993320)
chr8 (16-218)||(38533607-38533810)
chr8 (24-194)||(39446875-39447046)
chr8 (23-191)||(24716983-24717152)
chr8 (67-191)||(274453-274577)
chr8 (67-191)||(641272-641396)
chr8 (67-191)||(827078-827202)
chr8 (67-191)||(16039002-16039126)
chr8 (63-133)||(20567329-20567399)
chr8 (63-133)||(20573522-20573592)
chr8 (16-184)||(22735958-22736127)
chr8 (67-191)||(39115285-39115409)
chr8 (23-184)||(23837163-23837325)
chr8 (125-218)||(20561717-20561810)
chr8 (63-119)||(20567184-20567240)
chr8 (16-166)||(5854572-5854723)
chr8 (23-184)||(21198272-21198434)
chr8 (63-139)||(25122543-25122618)
chr8 (16-166)||(26011452-26011603)
chr8 (80-166)||(15933321-15933407)
chr8 (135-218)||(22981351-22981434)
chr8 (67-191)||(24385873-24385988)
chr8 (63-166)||(23226214-23226317)
chr8 (39-159)||(15969800-15969920)
chr8 (10-112)||(29759893-29759997)
chr8 (15-166)||(33528383-33528534)
chr8 (63-166)||(27233205-27233308)
chr8 (90-184)||(29306450-29306544)
chr8 (65-166)||(23151971-23152072)
chr8 (80-184)||(18261591-18261695)
chr8 (80-184)||(45559057-45559161)
chr8 (63-191)||(23158169-23158295)
chr8 (83-178)||(33611179-33611274)
chr8 (67-166)||(38635786-38635885)
chr8 (23-135)||(2544916-2545024)
chr8 (114-184)||(22497329-22497399)
[»] chr5 (36 HSPs)
chr5 (1-202)||(11583994-11584199)
chr5 (10-202)||(1168306-1168500)
chr5 (63-202)||(24183234-24183370)
chr5 (39-218)||(11337272-11337451)
chr5 (66-200)||(21397098-21397235)
chr5 (31-191)||(2031783-2031944)
chr5 (67-200)||(20712086-20712219)
chr5 (24-202)||(19405503-19405683)
chr5 (66-197)||(21906729-21906857)
chr5 (69-197)||(28261533-28261661)
chr5 (10-191)||(11342635-11342819)
chr5 (69-197)||(24475595-24475718)
chr5 (67-191)||(21650705-21650829)
chr5 (69-197)||(4865274-4865403)
chr5 (16-194)||(7728378-7728558)
chr5 (77-197)||(21646846-21646966)
chr5 (63-159)||(23466463-23466559)
chr5 (80-218)||(3673885-3674023)
chr5 (63-178)||(23493925-23494040)
chr5 (67-191)||(21204936-21205060)
chr5 (82-184)||(5450963-5451065)
chr5 (63-166)||(21617022-21617125)
chr5 (63-184)||(19862215-19862336)
chr5 (1-135)||(109010-109145)
chr5 (1-135)||(16105586-16105721)
chr5 (24-218)||(16595474-16595668)
chr5 (63-184)||(432469-432590)
chr5 (87-166)||(21222746-21222825)
chr5 (15-191)||(23981628-23981806)
chr5 (63-166)||(6456630-6456733)
chr5 (121-176)||(28902255-28902310)
chr5 (121-176)||(28938650-28938705)
chr5 (124-189)||(22053963-22054028)
chr5 (124-186)||(18531200-18531262)
chr5 (16-108)||(32966343-32966436)
chr5 (82-166)||(16835437-16835521)
[»] scaffold0011 (2 HSPs)
scaffold0011 (66-200)||(254918-255052)
scaffold0011 (66-200)||(261524-261658)
[»] chr2 (38 HSPs)
chr2 (63-200)||(271176-271313)
chr2 (63-206)||(4448231-4448374)
chr2 (23-218)||(25601989-25602185)
chr2 (63-218)||(28974055-28974210)
chr2 (66-197)||(32465867-32465998)
chr2 (24-194)||(22579971-22580140)
chr2 (39-195)||(23836814-23836971)
chr2 (69-197)||(25876026-25876154)
chr2 (19-202)||(36890787-36890972)
chr2 (1-184)||(19433452-19433636)
chr2 (39-218)||(27261787-27261964)
chr2 (23-191)||(22274688-22274856)
chr2 (24-194)||(24571401-24571572)
chr2 (23-191)||(22283921-22284089)
chr2 (78-197)||(6879458-6879577)
chr2 (16-160)||(3385-3529)
chr2 (67-187)||(9653021-9653141)
chr2 (67-187)||(21274174-21274293)
chr2 (63-194)||(67998-68130)
chr2 (1-184)||(43645837-43646020)
chr2 (29-184)||(25305416-25305573)
chr2 (65-194)||(31146290-31146419)
chr2 (15-166)||(24884643-24884795)
chr2 (65-189)||(25265520-25265643)
chr2 (63-166)||(23821743-23821846)
chr2 (63-166)||(23830822-23830925)
chr2 (63-166)||(24294661-24294764)
chr2 (1-70)||(24826961-24827031)
chr2 (1-135)||(25212990-25213126)
chr2 (25-191)||(19666495-19666663)
chr2 (63-166)||(722401-722504)
chr2 (65-190)||(19669222-19669348)
chr2 (116-178)||(22775331-22775393)
chr2 (116-178)||(22780709-22780771)
chr2 (124-189)||(24341519-24341584)
chr2 (80-166)||(24560869-24560955)
chr2 (80-184)||(9636768-9636872)
chr2 (65-189)||(36982571-36982694)
[»] scaffold0035 (2 HSPs)
scaffold0035 (31-218)||(118049-118237)
scaffold0035 (31-218)||(109548-109736)
[»] chr1 (32 HSPs)
chr1 (39-218)||(21718210-21718389)
chr1 (63-191)||(35522432-35522560)
chr1 (58-200)||(49967651-49967793)
chr1 (63-200)||(22403214-22403350)
chr1 (63-166)||(9784238-9784341)
chr1 (24-218)||(51627750-51627945)
chr1 (55-197)||(27329862-27330005)
chr1 (10-191)||(15861547-15861728)
chr1 (10-191)||(22366970-22367152)
chr1 (69-195)||(41212081-41212210)
chr1 (39-191)||(21859992-21860145)
chr1 (67-200)||(35054766-35054899)
chr1 (116-218)||(9784150-9784249)
chr1 (28-191)||(44035092-44035255)
chr1 (23-184)||(20177140-20177302)
chr1 (16-159)||(27674755-27674898)
chr1 (23-166)||(13376978-13377122)
chr1 (63-178)||(37233986-37234101)
chr1 (63-191)||(22143473-22143602)
chr1 (121-176)||(16645976-16646031)
chr1 (63-166)||(17608934-17609037)
chr1 (17-99)||(22829629-22829712)
chr1 (16-160)||(38033818-38033962)
chr1 (121-176)||(16656702-16656757)
chr1 (16-142)||(19603055-19603182)
chr1 (63-142)||(36356455-36356534)
chr1 (124-189)||(20445747-20445812)
chr1 (124-189)||(20531512-20531577)
chr1 (23-141)||(41229102-41229221)
chr1 (80-166)||(8538048-8538134)
chr1 (80-166)||(8603287-8603373)
chr1 (63-165)||(21195020-21195122)
[»] scaffold0359 (2 HSPs)
scaffold0359 (63-197)||(1323-1457)
scaffold0359 (79-200)||(11758-11876)
[»] scaffold0021 (3 HSPs)
scaffold0021 (39-200)||(132354-132516)
scaffold0021 (31-199)||(11660-11830)
scaffold0021 (71-200)||(88289-88418)
[»] scaffold0338 (1 HSPs)
scaffold0338 (31-218)||(8960-9148)
[»] scaffold0075 (1 HSPs)
scaffold0075 (23-218)||(4906-5102)
[»] scaffold0008 (1 HSPs)
scaffold0008 (66-200)||(22700-22834)
[»] scaffold0673 (2 HSPs)
scaffold0673 (66-199)||(927-1060)
scaffold0673 (69-197)||(6952-7083)
[»] scaffold0001 (2 HSPs)
scaffold0001 (63-200)||(60812-60949)
scaffold0001 (66-218)||(70708-70860)
[»] scaffold0610 (1 HSPs)
scaffold0610 (39-218)||(662-842)
[»] scaffold0396 (1 HSPs)
scaffold0396 (48-199)||(11813-11964)
[»] scaffold0117 (1 HSPs)
scaffold0117 (63-200)||(11672-11809)
[»] scaffold0160 (2 HSPs)
scaffold0160 (39-218)||(2-182)
scaffold0160 (31-131)||(3492-3593)
[»] scaffold0014 (2 HSPs)
scaffold0014 (63-218)||(85338-85493)
scaffold0014 (31-199)||(159275-159442)
[»] scaffold0240 (1 HSPs)
scaffold0240 (69-202)||(7581-7714)
[»] scaffold0195 (3 HSPs)
scaffold0195 (39-202)||(620-784)
scaffold0195 (65-189)||(19216-19339)
scaffold0195 (65-189)||(21300-21423)
[»] scaffold1164 (1 HSPs)
scaffold1164 (10-218)||(1332-1542)
[»] scaffold0480 (2 HSPs)
scaffold0480 (66-196)||(5354-5484)
scaffold0480 (31-192)||(8993-9156)
[»] scaffold0044 (1 HSPs)
scaffold0044 (66-202)||(38307-38443)
[»] scaffold0022 (3 HSPs)
scaffold0022 (39-218)||(112631-112808)
scaffold0022 (63-218)||(109596-109751)
scaffold0022 (16-178)||(103048-103211)
[»] scaffold0091 (2 HSPs)
scaffold0091 (74-198)||(32220-32344)
scaffold0091 (74-198)||(41959-42083)
[»] scaffold0083 (2 HSPs)
scaffold0083 (69-197)||(14889-15014)
scaffold0083 (69-112)||(14229-14272)
[»] scaffold0686 (1 HSPs)
scaffold0686 (23-191)||(6204-6373)
[»] scaffold0184 (1 HSPs)
scaffold0184 (23-191)||(31401-31570)
[»] scaffold0078 (1 HSPs)
scaffold0078 (23-191)||(41274-41443)
[»] scaffold0016 (4 HSPs)
scaffold0016 (69-197)||(164227-164355)
scaffold0016 (23-191)||(162299-162469)
scaffold0016 (23-191)||(166385-166547)
scaffold0016 (23-130)||(116687-116795)
[»] scaffold0554 (1 HSPs)
scaffold0554 (31-207)||(1889-2066)
[»] scaffold0077 (1 HSPs)
scaffold0077 (19-197)||(15578-15761)
[»] scaffold0031 (3 HSPs)
scaffold0031 (24-207)||(31010-31194)
scaffold0031 (98-202)||(70654-70759)
scaffold0031 (16-178)||(97324-97487)
[»] scaffold0234 (1 HSPs)
scaffold0234 (67-191)||(17525-17649)
[»] scaffold0095 (1 HSPs)
scaffold0095 (24-194)||(33837-34008)
[»] scaffold0032 (3 HSPs)
scaffold0032 (67-191)||(55591-55715)
scaffold0032 (16-163)||(93913-94061)
scaffold0032 (65-133)||(104793-104861)
[»] scaffold0116 (1 HSPs)
scaffold0116 (23-165)||(30056-30199)
[»] scaffold0025 (2 HSPs)
scaffold0025 (67-200)||(146611-146744)
scaffold0025 (124-189)||(8917-8982)
[»] scaffold0251 (2 HSPs)
scaffold0251 (67-191)||(13507-13631)
scaffold0251 (67-191)||(21481-21605)
[»] scaffold0175 (1 HSPs)
scaffold0175 (67-191)||(14959-15083)
[»] scaffold0092 (1 HSPs)
scaffold0092 (63-218)||(3325-3480)
[»] scaffold0068 (2 HSPs)
scaffold0068 (63-195)||(48154-48285)
scaffold0068 (63-195)||(61602-61733)
[»] scaffold0037 (2 HSPs)
scaffold0037 (67-191)||(94985-95109)
scaffold0037 (67-200)||(24832-24965)
[»] scaffold0103 (1 HSPs)
scaffold0103 (63-218)||(33668-33823)
[»] scaffold0034 (3 HSPs)
scaffold0034 (63-197)||(46171-46305)
scaffold0034 (63-197)||(40664-40798)
scaffold0034 (67-191)||(79874-79998)
[»] scaffold0039 (2 HSPs)
scaffold0039 (39-191)||(12641-12794)
scaffold0039 (39-164)||(19049-19175)
[»] scaffold0706 (1 HSPs)
scaffold0706 (67-191)||(6664-6788)
[»] scaffold0597 (1 HSPs)
scaffold0597 (67-191)||(1099-1223)
[»] scaffold0150 (2 HSPs)
scaffold0150 (1-184)||(28479-28663)
scaffold0150 (1-37)||(21650-21686)
[»] scaffold0574 (1 HSPs)
scaffold0574 (67-191)||(9628-9752)
[»] scaffold0342 (2 HSPs)
scaffold0342 (28-191)||(572-736)
scaffold0342 (83-207)||(5966-6091)
[»] scaffold0465 (1 HSPs)
scaffold0465 (67-184)||(10094-10211)
[»] scaffold0004 (2 HSPs)
scaffold0004 (67-191)||(186647-186770)
scaffold0004 (67-191)||(193609-193732)
[»] scaffold0122 (1 HSPs)
scaffold0122 (31-133)||(24368-24471)
[»] scaffold0740 (2 HSPs)
scaffold0740 (123-197)||(4351-4425)
scaffold0740 (69-108)||(4319-4358)
[»] scaffold0447 (2 HSPs)
scaffold0447 (63-200)||(4569-4707)
scaffold0447 (63-200)||(9183-9321)
[»] scaffold0053 (1 HSPs)
scaffold0053 (23-184)||(76967-77129)
[»] scaffold0303 (1 HSPs)
scaffold0303 (67-191)||(149-273)
[»] scaffold0028 (3 HSPs)
scaffold0028 (121-189)||(89584-89652)
scaffold0028 (1-135)||(130499-130634)
scaffold0028 (65-191)||(79547-79674)
[»] scaffold1272 (1 HSPs)
scaffold1272 (19-184)||(270-436)
[»] scaffold0700 (1 HSPs)
scaffold0700 (16-178)||(2483-2646)
[»] scaffold0383 (1 HSPs)
scaffold0383 (63-200)||(7177-7316)
[»] scaffold0243 (1 HSPs)
scaffold0243 (81-184)||(2436-2539)
[»] scaffold0009 (1 HSPs)
scaffold0009 (16-166)||(69415-69566)
[»] scaffold0013 (1 HSPs)
scaffold0013 (23-184)||(35444-35605)
[»] scaffold0123 (1 HSPs)
scaffold0123 (65-191)||(8018-8145)
[»] scaffold0080 (1 HSPs)
scaffold0080 (16-166)||(43936-44087)
[»] scaffold0589 (1 HSPs)
scaffold0589 (39-136)||(7815-7913)
[»] scaffold0483 (1 HSPs)
scaffold0483 (19-184)||(6622-6788)
[»] scaffold0006 (1 HSPs)
scaffold0006 (80-166)||(197391-197477)
[»] scaffold0389 (1 HSPs)
scaffold0389 (65-165)||(10670-10770)
[»] scaffold0058 (1 HSPs)
scaffold0058 (65-191)||(70418-70545)
[»] scaffold0970 (1 HSPs)
scaffold0970 (80-166)||(2478-2564)
[»] scaffold0125 (1 HSPs)
scaffold0125 (65-186)||(41658-41778)
[»] scaffold0132 (1 HSPs)
scaffold0132 (65-189)||(13516-13639)
[»] scaffold0049 (1 HSPs)
scaffold0049 (159-202)||(20274-20317)
[»] scaffold0010 (1 HSPs)
scaffold0010 (83-166)||(31046-31129)
[»] scaffold0162 (1 HSPs)
scaffold0162 (65-166)||(7163-7264)
[»] scaffold0521 (1 HSPs)
scaffold0521 (84-164)||(11121-11201)
[»] scaffold1734 (1 HSPs)
scaffold1734 (23-80)||(1364-1422)
[»] scaffold0367 (1 HSPs)
scaffold0367 (83-197)||(17428-17542)
[»] scaffold0231 (1 HSPs)
scaffold0231 (1-46)||(12992-13038)
[»] scaffold0165 (2 HSPs)
scaffold0165 (80-166)||(22022-22108)
scaffold0165 (80-184)||(29987-30091)
[»] scaffold0023 (1 HSPs)
scaffold0023 (83-197)||(61341-61455)
[»] scaffold0670 (1 HSPs)
scaffold0670 (80-184)||(7795-7899)
[»] scaffold0020 (1 HSPs)
scaffold0020 (15-178)||(107967-108130)
[»] scaffold0018 (1 HSPs)
scaffold0018 (121-189)||(51312-51380)


Alignment Details
Target: scaffold1867 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: scaffold1867
Description:

Target: scaffold1867; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 88 - 289
Alignment:
1 caaacttcttcattatcaacccattttacaaaaccactaacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagccatgaattatcat 100  Q
    ||||||||||||||||||||||||||||||||||||  |||||||| ||||||||   ||||||||||||||||||||||||||||||||||||||||||    
88 caaacttcttcattatcaacccattttacaaaaccaacaacaacaactcatttctcagcaacaatcatgaatcatgcaaacccaagccatgaattatcat 187  T
101 caacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatattttcaaca 200  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
188 caacaacatgacatatcaacaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattgagcatattttcaaca 287  T
201 ta 202  Q
    ||    
288 ta 289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 166; Significance: 5e-89; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 7284363 - 7284146
Alignment:
1 caaacttcttcattatcaacccattttacaaaaccactaacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagccatgaattatcat 100  Q
    ||||||||| |||||||||||||||| |||||||||| |||||||| ||||||||  |||||||||||||||||||||||| ||||||||||||||| ||    
7284363 caaacttctccattatcaacccatttaacaaaaccaccaacaacaactcatttctcaacaacaatcatgaatcatgcaaactcaagccatgaattattat 7284264  T
101 caacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatattttcaaca 200  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||||    
7284263 caacaacatgacatatcaacaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaaggataattcaccaattaagcatattttcaaca 7284164  T
201 taaaccaacttctcatac 218  Q
    || |||||||||||||||    
7284163 tataccaacttctcatac 7284146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 31 - 218
Target Start/End: Original strand, 11287390 - 11287578
Alignment:
31 aaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatc 129  Q
    ||||||| |||||||  ||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||    
11287390 aaaccaccaacaacatctcatttctcaacaacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttagcaacaacaacatc 11287489  T
130 aattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatattttcaacataaaccaacttctcatac 218  Q
    || ||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||    
11287490 aactgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcatattttcaacatataccaacttctcatac 11287578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 66 - 207
Target Start/End: Complemental strand, 15822669 - 15822528
Alignment:
66 catgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaac 165  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
15822669 catgaatcatgcaaacccaagccatgaatgatcatcaacaacatgacatatcaacaacaacatcaattgatcatgaaacttatcacaattcaacaacaac 15822570  T
166 aatgcataattcaccaattgagcatattttcaacataaacca 207  Q
    || ||||||||||||| |||||||||||||||||||| ||||    
15822569 aaagcataattcaccatttgagcatattttcaacatatacca 15822528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 39 - 218
Target Start/End: Complemental strand, 26070530 - 26070350
Alignment:
39 aacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatc 137  Q
    |||||||| | ||||||  ||||||| |||||||||||||| ||||||||||||||| |||||| ||||||| || || ||| |||||||||||||||||    
26070530 aacaacaacttatttctcaacaacaaatcatgaatcatgcatacccaagccatgaataatcatccacaacatcacttagcaacaacaacatcaattgatc 26070431  T
138 atgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatattttcaacataaaccaacttctcatac 218  Q
    |||||||||||||||||||| ||||||||   ||||||||||||||| ||||||||||||||||| ||||  |||||||||    
26070430 atgaaacttatcacaattcatcaacaacataacataattcaccaattaagcatattttcaacatataccattttctcatac 26070350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 39 - 218
Target Start/End: Complemental strand, 26094317 - 26094137
Alignment:
39 aacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatc 137  Q
    |||||||| | ||||||  ||||||| |||||||||||||| ||||||||||||||| |||||| ||||||| || || ||| |||||||||||||||||    
26094317 aacaacaacttatttctcaacaacaaatcatgaatcatgcatacccaagccatgaataatcatccacaacatcacttagcaacaacaacatcaattgatc 26094218  T
138 atgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatattttcaacataaaccaacttctcatac 218  Q
    |||||||||||||||||||| ||||||||   ||||||||||||||| ||||||||||||||||| ||||  |||||||||    
26094217 atgaaacttatcacaattcatcaacaacataacataattcaccaattaagcatattttcaacatataccattttctcatac 26094137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 63 - 200
Target Start/End: Original strand, 12758993 - 12759130
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||| |||| ||||||||||||||||||||||||| |||||||||||| || ||| ||||||| |||||||||||||||||||||| |||||| ||||    
12758993 aatcataaatcctgcaaacccaagccatgaattatcaccaacaacatgacttaacaacaacaacaacaattgatcatgaaacttatcataattcaccaac 12759092  T
163 aacaatgcataattcaccaattgagcatattttcaaca 200  Q
    ||||  ||||||||||||||||||||||||||||||||    
12759093 aacatagcataattcaccaattgagcatattttcaaca 12759130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 39 - 197
Target Start/End: Complemental strand, 39046889 - 39046731
Alignment:
39 aacaacaattcatttcttgacaaca-atcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatc 137  Q
    |||||||  ||||||||  |||||| |||| |||| |||||||||||||||||||||||||||||||||||||||  | ||| ||||||| |||||||||    
39046889 aacaacatctcatttctcaacaacagatcaagaattatgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaacaacaattgatc 39046790  T
138 atgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatattttca 197  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||    
39046789 atgaaacatatcacaattcatcaacaacaatgcataattcaccaattgag-atattttca 39046731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 63 - 200
Target Start/End: Complemental strand, 45452407 - 45452272
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||| ||||    
45452407 aatcatgaatcatgccaacccaagccatgaattatcatcaacaacatgacatatcaacaacaacgacaattgatcatgaaacttatcacaattcatcaac 45452308  T
163 aacaatgcataattcaccaattgagcatattttcaaca 200  Q
    ||||  ||||   |||| ||||||||||||||||||||    
45452307 aacatagcat--gtcacaaattgagcatattttcaaca 45452272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 31 - 202
Target Start/End: Complemental strand, 12248395 - 12248222
Alignment:
31 aaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatc 129  Q
    ||||||| |||||||  ||||||||  ||||||| |||||||||||||| ||||||| |||| ||||||||| ||||||| || || ||| |||||||||    
12248395 aaaccaccaacaacatctcatttctcaacaacaaatcatgaatcatgcatacccaagtcatgcattatcatccacaacatcacttagcaacaacaacatc 12248296  T
130 aattgatcatgaaacttatcacaattcaacaacaacaatgcataattc-accaattgagcatattttcaacata 202  Q
     |||||||||||| |||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||    
12248295 cattgatcatgaatcttatcacaattcaacaacaacatagcataattcaaccaattgagcatattttcaacata 12248222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 63 - 218
Target Start/End: Complemental strand, 16570247 - 16570091
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||||||||| |||||||||||||||||||||| || |||| || || ||| ||||||||||||||||||||||||||||| ||||||||||||    
16570247 aatcatgaatcatgcatacccaagccatgaattatcatccacgacatcacttagcaacaacaacatcaattgatcatgaaacttatctcaattcaacaac 16570148  T
163 aacaatgcataattc-accaattgagcatattttcaacataaaccaacttctcatac 218  Q
    ||||  ||||||||| ||||||||||||||||||| | ||| ||||  |||||||||    
16570147 aacatagcataattcaaccaattgagcatattttccagatataccattttctcatac 16570091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 63 - 218
Target Start/End: Original strand, 16595415 - 16595571
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||||||||| |||||||||||||||||||||| || |||| || || ||| ||||||||||||||||||||||||||||| ||||||||||||    
16595415 aatcatgaatcatgcatacccaagccatgaattatcatccacgacatcacttagcaacaacaacatcaattgatcatgaaacttatctcaattcaacaac 16595514  T
163 aacaatgcataattc-accaattgagcatattttcaacataaaccaacttctcatac 218  Q
    ||||  ||||||||| ||||||||||||||||||| | ||| ||||  |||||||||    
16595515 aacatagcataattcaaccaattgagcatattttccagatataccattttctcatac 16595571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 67 - 200
Target Start/End: Original strand, 3895035 - 3895168
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||||||| ||||||||||||||||| |||| | ||||| || || ||| ||||||||| ||||||||||||||||||||||||||| ||||||||    
3895035 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaaca 3895134  T
167 atgcataattcaccaattgagcatattttcaaca 200  Q
      ||||||||||||||||||||||||||||||||    
3895135 tagcataattcaccaattgagcatattttcaaca 3895168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 63 - 200
Target Start/End: Complemental strand, 12370081 - 12369944
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||||||||| ||| ||||||||||| || ||  ||||||| || || ||| ||||||||||||| ||||||||| ||||||||||||||||||    
12370081 aatcatgaatcatgcatacctaagccatgaataattatgcacaacatcacttagcaacaacaacatcaattaatcatgaaagttatcacaattcaacaac 12369982  T
163 aacaatgcataattcaccaattgagcatattttcaaca 200  Q
    ||||| ||||||||||||||||||||||||||||||||    
12369981 aacaaggcataattcaccaattgagcatattttcaaca 12369944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 63 - 200
Target Start/End: Original strand, 47289788 - 47289924
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    ||||||||||||||||| | |||||||||||||||||||| ||||||||| || ||  |||| || |||||||||||||||||| |||||||||| ||||    
47289788 aatcatgaatcatgcaa-cacaagccatgaattatcatcatcaacatgacttaacagcaacagcaacaattgatcatgaaacttttcacaattcatcaac 47289886  T
163 aacaatgcataattcaccaattgagcatattttcaaca 200  Q
    ||||| ||||||||||||||||||||||||||||||||    
47289887 aacaaagcataattcaccaattgagcatattttcaaca 47289924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 63 - 207
Target Start/End: Complemental strand, 49047915 - 49047771
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||| || || ||| |||||||||||||||||||||| |||||||||||||||||||    
49047915 aatcatgaatcatgcatacccaagccatgaattatcagcaacaacatcacttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaac 49047816  T
163 aacaatgcataattc-accaattgagcatattttcaacataaacca 207  Q
    ||||   |||||||| |||||||||||||| |||||||||| ||||    
49047815 aacataacataattcaaccaattgagcata-tttcaacatatacca 49047771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 10 - 191
Target Start/End: Original strand, 126366 - 126549
Alignment:
10 tcattatcaacccatttta-caaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaac 107  Q
    |||| |||||||||||||  | ||| ||| ||||||||| |||||||  ||||||| ||||||||||||||||||||||||||| || ||||||||||      
126366 tcataatcaacccattttctccaaaacaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagccatgtatcatcatcaacagt 126465  T
108 atgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcata 191  Q
    |||||  | ||| ||||||| | |||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||    
126466 atgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 126549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 24 - 192
Target Start/End: Original strand, 13274753 - 13274923
Alignment:
24 ttttacaaaaccactaacaacaattcatttcttgacaacaat-catgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaa 122  Q
    |||||| |||| || |||||||  ||||||||  |||||||  ||||||||||||| ||| ||||||||||| |||||||||||||| || || ||| ||    
13274753 ttttaccaaactaccaacaacatctcatttctcaacaacaaaacatgaatcatgcataccaaagccatgaatcatcatcaacaacatcacttagcaacaa 13274852  T
123 caacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattc-accaattgagcatat 192  Q
    |||||||||||||||||||| |||||||||||||||||||||||  ||||||||| |||||||||||||||    
13274853 caacatcaattgatcatgaatcttatcacaattcaacaacaacatagcataattcaaccaattgagcatat 13274923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 39 - 191
Target Start/End: Complemental strand, 111542 - 111390
Alignment:
39 aacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatca 138  Q
    |||||||||| ||||||  |||||||   ||||||||||| ||||||||||||||||||||||||| | |||||  | ||| ||||||| | ||||||||    
111542 aacaacaatttatttctcaacaacaaatttgaatcatgcatacccaagccatgaattatcatcaaccatatgactaaacaacaacaacaaccattgatca 111443  T
139 tgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcata 191  Q
    |||||| |||||||||||| ||||||| |||||||||||||||||||||||||    
111442 tgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 111390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 63 - 200
Target Start/End: Original strand, 143652 - 143782
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||| |||||| |||||||||||||||||||| ||||||||||| ||      |||||| |||||||||||||||||| |||||||||| ||||    
143652 aatcatgaattatgcaa-cccaagccatgaattatcattaacaacatgactta------acaacaacaattgatcatgaaacttttcacaattcatcaac 143744  T
163 aacaatgcataattcaccaattgagcatattttcaaca 200  Q
    ||||| ||||||||||||||||||||||||||||||||    
143745 aacaaagcataattcaccaattgagcatattttcaaca 143782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 63 - 200
Target Start/End: Original strand, 44865234 - 44865373
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaa---ttgatcatgaaacttatcacaattcaac 159  Q
    |||||||||| |||||| |||||||||||||||||||| ||| ||||||| || ||| ||||||| |||   || ||||||||||||||||||||||| |    
44865234 aatcatgaattatgcaa-cccaagccatgaattatcataaactacatgacttaacaacaacaacaacaacaattaatcatgaaacttatcacaattcatc 44865332  T
160 aacaacaatgcataattcaccaattgagcatattttcaaca 200  Q
    ||||| |||||||||||||||||||||||||||||||||||    
44865333 aacaaaaatgcataattcaccaattgagcatattttcaaca 44865373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 67 - 191
Target Start/End: Original strand, 3049593 - 3049717
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||||||| ||||||||||||||||| |||| | ||||| || || ||| ||||||||| ||||||||||||||||||||||||||| ||||||||    
3049593 atgaatcatgcatacccaagccatgaattaacatccataacatcacttaacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaaca 3049692  T
167 atgcataattcaccaattgagcata 191  Q
      |||||||||||||||||||||||    
3049693 tagcataattcaccaattgagcata 3049717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 67 - 191
Target Start/End: Complemental strand, 2190431 - 2190307
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||||||| ||||||||||||||||| |||| | ||||| || || ||| | ||||||| |||||||||||||| |||||||||||| |||||||     
2190431 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacatcaacatctattgatcatgaaacatatcacaattcatcaacaacc 2190332  T
167 atgcataattcaccaattgagcata 191  Q
    |||||||||||||||||||||||||    
2190331 atgcataattcaccaattgagcata 2190307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 39 - 197
Target Start/End: Original strand, 35094798 - 35094956
Alignment:
39 aacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatc 137  Q
    |||||||  ||||||||  ||||||| ||| |||| ||||||||||||||||||| |||||||||||||||||||  | ||| |||| || || ||||||    
35094798 aacaacatctcatttctcaacaacaaatcaagaattatgcaaacccaagccatgatttatcatcaacaacatgactaaacaacaacagcaaca-ttgatc 35094896  T
138 atgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatattttca 197  Q
    ||||||| | | |||||||| |||||||| ||||||||||||||||||||||||||||||    
35094897 atgaaacatttaacaattcatcaacaacagtgcataattcaccaattgagcatattttca 35094956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 191
Target Start/End: Complemental strand, 32494341 - 32494167
Alignment:
19 acccatttt-acaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatat 116  Q
    ||||||||| || ||||||  |||||||||| ||||||  ||||||| | |||||||||||| || |||||||||||||||||||||  | |||||  |     
32494341 acccattttcaccaaaccaacaacaacaatttatttctcaacaacaaattatgaatcatgcatacacaagccatgaattatcatcaatcatatgactaaa 32494242  T
117 caaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcata 191  Q
    ||| ||||||| | ||| |||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||    
32494241 caacaacaacaaccattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 32494167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 67 - 191
Target Start/End: Original strand, 2028931 - 2029055
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||||||| ||||||| ||||||||| |||| | ||||| || || |||  |||||||| ||||||||||||||||||||||||||| ||||||      
2028931 atgaatcatgcatacccaagtcatgaattagcatccataacatcacttaacaacgacaacatctattgatcatgaaacttatcacaattcatcaacaatc 2029030  T
167 atgcataattcaccaattgagcata 191  Q
    |||||||||||||||||||||||||    
2029031 atgcataattcaccaattgagcata 2029055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 67 - 191
Target Start/End: Complemental strand, 42056534 - 42056410
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||||||| ||||||||||||||||| |||  | || || || || ||| ||||||||| |||||||||||||| |||||||||||| |||||||     
42056534 atgaatcatgcatacccaagccatgaattagcattcataatatcacttaacaacaacaacatctattgatcatgaaacatatcacaattcatcaacaacc 42056435  T
167 atgcataattcaccaattgagcata 191  Q
    |||||||||||||||||||||||||    
42056434 atgcataattcaccaattgagcata 42056410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 23 - 184
Target Start/End: Complemental strand, 17224220 - 17224058
Alignment:
23 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaa 121  Q
    ||||||||||||||| |||||||| ||||||||   |||||| |||||||| ||| | ||||||||||||||| ||||| |||||||| || || ||| |    
17224220 attttacaaaaccaccaacaacaactcatttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcattaacaacatcacttagcaaca 17224121  T
122 acaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaatt 184  Q
    |||||||||||||| |||||  ||||  |||||||||||||||||  |||||||||| |||||    
17224120 acaacatcaattgaacatgactcttacaacaattcaacaacaacatagcataattcaacaatt 17224058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 63 - 176
Target Start/End: Original strand, 13377535 - 13377648
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||| | ||| | ||||||||||||||| |||||||||||||| || || ||| ||||||||||||||| |||||| |||||||||||||||||||    
13377535 aatcatgatttatgaacacccaagccatgaatcatcatcaacaacattacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaac 13377634  T
163 aacaatgcataatt 176  Q
    ||||  ||||||||    
13377635 aacatagcataatt 13377648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 16 - 166
Target Start/End: Complemental strand, 16915217 - 16915066
Alignment:
16 tcaacccattttacaaaaccactaacaacaattcatttcttgacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacat 114  Q
    |||||||||||||||||||||  |||||||| ||| ||||   || | |||||||| | ||| | ||||||||||||||| |||| |||||| ||||| |    
16915217 tcaacccattttacaaaaccaacaacaacaactcaattctcttcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatgactt 16915118  T
115 atcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    | ||| ||||||||||||||| |||||| || |||| |||||||||||||||    
16915117 agcaacaacaacatcaattgaacatgaatctcatcataattcaacaacaaca 16915066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 80 - 200
Target Start/End: Complemental strand, 13863154 - 13863033
Alignment:
80 acccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattc-a 178  Q
    |||||||||||| || || | |||||| || || || ||| ||||||| ||||||| ||||||  ||||||||||||||||||||||  ||||||||| |    
13863154 acccaagccatgcatcattaacaacaatatcacttagcaacaacaacaacaattgaacatgaatattatcacaattcaacaacaacatagcataattcaa 13863055  T
179 ccaattgagcatattttcaaca 200  Q
    ||||||||||||||||||||||    
13863054 ccaattgagcatattttcaaca 13863033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 16 - 166
Target Start/End: Original strand, 48356602 - 48356753
Alignment:
16 tcaacccattttacaaaaccactaacaacaattcatttcttgacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacat 114  Q
    |||||||||||||||||||||  |||||||| ||| ||||   || | |||||||| | ||| | ||||||||||||||| |||| |||||| || || |    
48356602 tcaacccattttacaaaaccaacaacaacaactcaattctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcactt 48356701  T
115 atcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    | ||| ||||||||||||||| |||||| || |||| |||||||||||||||    
48356702 agcaacaacaacatcaattgaacatgaatctcatcataattcaacaacaaca 48356753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 14272189 - 14272049
Alignment:
2 aaacttcttcattatcaacccattttacaaaaccactaacaacaattcatttcttgacaac-aatcatgaatcatgcaaacccaagccatgaattatcat 100  Q
    |||||||||||| ||||||||||||||||||||||| | |||||| ||||||||   || | |||||||||| ||| | || |||||||||||| ||||     
14272189 aaacttcttcatcatcaacccattttacaaaaccaccaccaacaactcatttctcatcatctaatcatgaattatgaacactcaagccatgaatcatcaa 14272090  T
101 caacaacatgacatatcaaaaacaacatcaattgatcatga 141  Q
    |||||| || |  || ||| ||||||||||||||| |||||    
14272089 caacaatatcatttagcaacaacaacatcaattgaacatga 14272049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 184
Target Start/End: Original strand, 31501179 - 31501300
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||| ||||| | ||||||||||||||| |||| |||||| ||  |||| ||| ||||||||||||| | |||||  || ||||||||||||||||    
31501179 aatcatgactcatgaacacccaagccatgaatcatcaacaacaatatctcataacaacaacaacatcaattaaacatgattctcatcacaattcaacaac 31501278  T
163 aacaatgcataattcaccaatt 184  Q
    ||||  ||| |||||| |||||    
31501279 aacatagcacaattcaacaatt 31501300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 82 - 166
Target Start/End: Original strand, 9611332 - 9611416
Alignment:
82 ccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    ||||| ||||||| |||| |||||| || || || ||| ||||||||||||||| |||||| || |||| |||||||||||||||    
9611332 ccaagtcatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatgaatctcatcataattcaacaacaaca 9611416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 82 - 166
Target Start/End: Original strand, 9838904 - 9838988
Alignment:
82 ccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    ||||| ||||||| |||| |||||| || || || ||| ||||||||||||||| |||||| || |||| |||||||||||||||    
9838904 ccaagtcatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatgaatctcatcataattcaacaacaaca 9838988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 189
Target Start/End: Original strand, 13321033 - 13321148
Alignment:
75 tgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaa-caacaatgcata 173  Q
    |||||||||||| ||||| | |||| ||||||||| |  || ||| || |||||||||||| |||||| | |||| ||||||||||| ||||   ||| |    
13321033 tgcaaacccaagtcatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaattcaacaatcaacttagcaaa 13321132  T
174 attcaccaattgagca 189  Q
    ||||||||||||||||    
13321133 attcaccaattgagca 13321148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 166
Target Start/End: Complemental strand, 34241477 - 34241326
Alignment:
16 tcaacccattttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacat 114  Q
    ||||||| |||||||||||||  |||||||| |||||| |   || ||| |||||| | ||| | || |||||||||||| |||| ||||||  | || |    
34241477 tcaaccctttttacaaaaccaacaacaacaactcatttttcatcatcaaatcatgatttatgaacactcaagccatgaatcatcaacaacaatgtcactt 34241378  T
115 atcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    ||||| ||||||||||||| | |||||  || |||| |||||||||||||||    
34241377 atcaacaacaacatcaattaaacatgattctcatcataattcaacaacaaca 34241326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 1937290 - 1937200
Alignment:
23 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgac 112  Q
    |||| |||||||||| ||||| ||| |||||||  |||| || | |||||||||||||||||||| |||| || ||||||||||| |||||    
1937290 atttcacaaaaccaccaacaataatccatttctcaacaaaaaattatgaatcatgcaaacccaagtcatgtatcatcatcaacaatatgac 1937200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 164
Target Start/End: Original strand, 4484733 - 4484834
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||| ||||| | |||||||| |||||| |||| |||||| ||  | || ||| ||||||||||||| | |||||  || ||||||||||||||||    
4484733 aatcatgattcatgaatacccaagctatgaatcatcaacaacaatatctcttaacaacaacaacatcaattaaacatgattctcatcacaattcaacaac 4484832  T
163 aa 164  Q
    ||    
4484833 aa 4484834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 184
Target Start/End: Complemental strand, 20583795 - 20583674
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||| | ||| | ||||||||||||||| |||| |||||| ||  | || ||| ||||||||||||| | |||||  || |||| |||||||||||    
20583795 aatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcccttaacaacaacaacatcaattaaacatgattctcatcataattcaacaac 20583696  T
163 aacaatgcataattcaccaatt 184  Q
    ||||  ||| |||||| |||||    
20583695 aacatagcacaattcaacaatt 20583674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 184
Target Start/End: Original strand, 16919598 - 16919686
Alignment:
96 atcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaatt 184  Q
    |||| |||||| || || || ||| ||||||||||||| | || ||  |||||||||||||||||||||||  |||||||||| |||||    
16919598 atcaacaacaatattacttagcaacaacaacatcaattaaacacgattcttatcacaattcaacaacaacatagcataattcatcaatt 16919686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 167
Target Start/End: Original strand, 25124153 - 25124238
Alignment:
80 acccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaa 167  Q
    ||||| ||||||||| |||| |||||||||  |||||||| ||||||||||||| | |||| || | ||||||| |||||||||||||    
25124153 acccatgccatgaatcatcaacaacaacatctcatatcaacaacaacatcaattaagcatg-aattcatcacaa-tcaacaacaacaa 25124238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 184
Target Start/End: Original strand, 46474027 - 46474128
Alignment:
83 caagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaa 182  Q
    ||||| |||||| |||| |||||| ||  | || ||| ||||||||||||| | |||||| || ||||||| ||||||||||||  ||| |||||| |||    
46474027 caagctatgaatcatcaacaacaatatctcttaacaacaacaacatcaattaaacatgaatctcatcacaaatcaacaacaacatagcacaattcaacaa 46474126  T
183 tt 184  Q
    ||    
46474127 tt 46474128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 184
Target Start/End: Complemental strand, 9724031 - 9723927
Alignment:
80 acccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcac 179  Q
    |||||||| |||||| |||| ||| || ||  | || ||| ||||||||||||| | |||||| || ||||||| ||||||||||||  ||| ||||||     
9724031 acccaagctatgaatcatcaacaataatatctcttaacaacaacaacatcaattaaacatgaatctcatcacaaatcaacaacaacatagcacaattcaa 9723932  T
180 caatt 184  Q
    |||||    
9723931 caatt 9723927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 184
Target Start/End: Complemental strand, 17947816 - 17947712
Alignment:
80 acccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcac 179  Q
    |||||||| |||||| |||| |||||| ||  | || ||| ||||||||||||| | |||||  || ||||||| ||||||||||||  ||| ||||||     
17947816 acccaagctatgaatcatcaacaacaatatctcttaacaacaacaacatcaattaaacatgattctcatcacaaatcaacaacaacatagcacaattcaa 17947717  T
180 caatt 184  Q
    |||||    
17947716 caatt 17947712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 162; Significance: 1e-86; HSPs: 3)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 417 - 200
Alignment:
1 caaacttcttcattatcaacccattttacaaaaccactaacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagccatgaattatcat 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |  ||||||||  |||||||||||||||||||||||||||||| ||||||||||||    
417 caaacttcttcattatcaacccattttacaaaaccaccaacaaaagctcatttctcaacaacaatcatgaatcatgcaaacccaagctatgaattatcat 318  T
101 caacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatattttcaaca 200  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||| |||| |||||||||||||||    
317 caacaacatgacatatcaacaacaacatcaattgatcattaaacttatcacaattcaacaacaacaaaacataattcacgaattaagcatattttcaaca 218  T
201 taaaccaacttctcatac 218  Q
    || |||||||||||||||    
217 tataccaacttctcatac 200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #2
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 100 - 218
Target Start/End: Complemental strand, 6612 - 6494
Alignment:
100 tcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatattttcaac 199  Q
    ||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||| |||| ||||||||||||||    
6612 tcaacaacaagacatatcaataacaacatcaattgatcattaaacttatcacaattcaacaacaacaaaacataattcacgaattaagcatattttcaac 6513  T
200 ataaaccaacttctcatac 218  Q
    ||| |||||||||||||||    
6512 atataccaacttctcatac 6494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 6666 - 6603
Alignment:
1 caaacttcttcattatcaacccattttacaaaaccactaacaacaattcatttcttgacaacaa 64  Q
    ||||||||||||||||||||||||||||||||||||| || ||||| ||| ||||  |||||||    
6666 caaacttcttcattatcaacccattttacaaaaccaccaagaacaactcaattctcaacaacaa 6603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 155; Significance: 2e-82; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 21455 - 21673
Alignment:
1 caaacttcttcattatcaacccattttacaaaaccactaacaacaattcatttcttgacaacaat-catgaatcatgcaaacccaagccatgaattatca 99  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
21455 caaacttcttcattatcaacccattttacaaaaccaccaacaacaactcatttcttaacaacaattcatgaatcatgcaaacccaagccatgaattatca 21554  T
100 tcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatattttcaac 199  Q
    ||||||||||||| || ||| ||||||||||| | ||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||    
21555 tcaacaacatgacttagcaacaacaacatcaaataatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcatattttcaac 21654  T
200 ataaaccaacttctcatac 218  Q
    ||| ||||  |||||||||    
21655 atataccattttctcatac 21673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 31154 - 31372
Alignment:
1 caaacttcttcattatcaacccattttacaaaaccactaacaacaattcatttcttgacaacaat-catgaatcatgcaaacccaagccatgaattatca 99  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||  |||||||| ||||||||||||||||||||||||||||||||||    
31154 caaactttttcattatcaacccattttacaaaaccaccaacaacaactcatttctcaacaacaattcatgaatcatgcaaacccaagccatgaattatca 31253  T
100 tcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatattttcaac 199  Q
    ||||||||||||| || ||| || ||||||||||||| |||||||||||||||||||| ||||||||  | |||||| ||||||||||||||||||||||    
31254 tcaacaacatgacttagcaacaaaaacatcaattgataatgaaacttatcacaattcatcaacaacatagtataatttaccaattgagcatattttcaac 31353  T
200 ataaaccaacttctcatac 218  Q
    ||| ||||  |||||||||    
31354 atataccattttctcatac 31372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 154; Significance: 7e-82; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 24903 - 25103
Alignment:
1 caaacttcttcattatcaacccattttacaaaaccactaacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagccatgaattatcat 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||  |||||||||||||||||||||| ||||||||||||||||||||    
24903 caaacttcttcattatcaacccattttacaaaaccaccaacaacaactcatttctcaacaacaatcatgaatcatgcaa-cccaagccatgaattatcat 25001  T
101 caacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatattttcaaca 200  Q
    |||||||||| |||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
25002 caacaacatgccatatcaacaacaacaacaattgatcgtgaaacttatcacaattcaacaacaacaaaacataattcaccaattgagcatattttcaaca 25101  T
201 ta 202  Q
    ||    
25102 ta 25103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 58 - 202
Target Start/End: Original strand, 25213 - 25356
Alignment:
58 acaacaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattca 157  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||| |||||||||||||||||||    
25213 acaacaatcatgaatcatgcaa-cccaagccatgaattatcatcaacaacatgccatatcaacaacaacaacaattgatcgtgaaacttatcacaattca 25311  T
158 acaacaacaatgcataattcaccaattgagcatattttcaacata 202  Q
    ||||||||||  |||||||||||||||||||||||||||||||||    
25312 acaacaacaaaacataattcaccaattgagcatattttcaacata 25356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0833 (Bit Score: 141; Significance: 4e-74; HSPs: 1)
Name: scaffold0833
Description:

Target: scaffold0833; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 3243 - 3407
Alignment:
1 caaacttcttcattatcaacccattttacaaaaccactaacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagccatgaattatcat 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||    
3243 caaacttcttcattatcaacccattttacaaaaccaccaacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcat 3342  T
101 caacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaac 165  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
3343 caacaacatgacatatcaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaac 3407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 141; Significance: 4e-74; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 39 - 218
Target Start/End: Original strand, 31628249 - 31628429
Alignment:
39 aacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatc 137  Q
    |||||||  ||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
31628249 aacaacatctcatttctccacaacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaacaacaacatcaattgatc 31628348  T
138 atgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatattttcaacataaaccaacttctcatac 218  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||    
31628349 atgaaacttatcacaattcaacaacaacaaagcataattcaccaattaagcatattttcaacatataccaacttctcatac 31628429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 70 - 202
Target Start/End: Original strand, 18432656 - 18432788
Alignment:
70 aatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatg 169  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |    
18432656 aatcatgcaaacccaagccatgaattatcatcaacaacataacatatcaacaacatcatcaattgatcatgaaacttatcacaattcaacaacaacaaag 18432755  T
170 cataattcaccaattgagcatattttcaacata 202  Q
    ||||||||||||||| |||||||||||||||||    
18432756 cataattcaccaattaagcatattttcaacata 18432788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 18583277 - 18583451
Alignment:
1 caaacttcttcattatcaacccattttacaaaaccactaacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagccatgaattatcat 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||    
18583277 caaacttcttcattatcaacccattttacaaaaccaccaacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcat 18583376  T
101 caacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcata 191  Q
    ||||                |||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||    
18583377 caac----------------aacaacatcaattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 18583451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 63 - 200
Target Start/End: Original strand, 16086023 - 16086160
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||    
16086023 aatcatgaatcatgcaaacccaagtcatgaattatcattaacaacatgacatatcaacaacaacatcaaatgatcatgaaacttatcataattcaacaac 16086122  T
163 aacaatgcataattcaccaattgagcatattttcaaca 200  Q
    ||||| | |||||||||||||| |||||||||||||||    
16086123 aacaaggtataattcaccaattaagcatattttcaaca 16086160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 66 - 200
Target Start/End: Original strand, 32898799 - 32898933
Alignment:
66 catgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaac 165  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||  | ||| |||||| |||||||||||||||||||||||||||||| ||||||     
32898799 catgaatcatgcaaacccaagccattaattatcatcaacaacatgactaaacaacaacaacttcaattgatcatgaaacttatcacaattcatcaacaat 32898898  T
166 aatgcataattcaccaattgagcatattttcaaca 200  Q
    |||||||||||||||||||||||||||||||||||    
32898899 aatgcataattcaccaattgagcatattttcaaca 32898933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 63 - 199
Target Start/End: Original strand, 22440941 - 22441076
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| || ||| ||||||| ||||||||||||||||||||||||| |||  |||    
22440941 aatcatgaatcatgcaa-cccaagccatgaattatcatcaacaacatgacttaacaacaacaacaacaattgatcatgaaacttatcacaaatcatgaac 22441039  T
163 aacaatgcataattcaccaattgagcatattttcaac 199  Q
    |||||||||||||||||||||||||||||||||||||    
22441040 aacaatgcataattcaccaattgagcatattttcaac 22441076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 18823699 - 18823565
Alignment:
1 caaacttcttcattatcaacccattttacaaaaccactaacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagccatgaattatcat 100  Q
    ||||||||||| ||||||| ||||||||||||||||| | |||||| ||||||||  |||||||||||||||||||||||||||||||||| ||||||||    
18823699 caaacttcttctttatcaagccattttacaaaaccaccaccaacaactcatttctccacaacaatcatgaatcatgcaaacccaagccatggattatcat 18823600  T
101 caacaacatgacatatcaaaaacaacatcaattga 135  Q
    ||||||||||||||||||| |||||||||||||||    
18823599 caacaacatgacatatcaacaacaacatcaattga 18823565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 18839554 - 18839420
Alignment:
1 caaacttcttcattatcaacccattttacaaaaccactaacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagccatgaattatcat 100  Q
    ||||||||||| || ||||| |||||||||||||||| | |||||| ||||||||  |||||||||||||||||||||||||||||||||| ||||||||    
18839554 caaacttcttctttttcaactcattttacaaaaccaccaccaacaactcatttctccacaacaatcatgaatcatgcaaacccaagccatggattatcat 18839455  T
101 caacaacatgacatatcaaaaacaacatcaattga 135  Q
    ||||||||||||||||||| |||||||||||||||    
18839454 caacaacatgacatatcaacaacaacatcaattga 18839420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 23 - 191
Target Start/End: Complemental strand, 35015447 - 35015278
Alignment:
23 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaa 121  Q
    |||| |||||||||| ||||||||| |||||||  ||||||| ||||||||||||||||||||||||||| || ||||||||||| |||||  | ||| |    
35015447 atttcacaaaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagccatgtatcatcatcaacaatatgactaaacaaca 35015348  T
122 acaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcata 191  Q
    |||||| | |||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||    
35015347 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 35015278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 63 - 200
Target Start/End: Original strand, 16106527 - 16106659
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    ||||||||||||||||||     | ||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
16106527 aatcatgaatcatgcaaa-----gtcatgaattatcattaacaacatgacatatcaacaacaacatcaaatgatcatgaaacttatcacaattcaacaac 16106621  T
163 aacaatgcataattcaccaattgagcatattttcaaca 200  Q
    ||||| | |||||||||||||| |||||||||||||||    
16106622 aacaaggtataattcaccaattaagcatattttcaaca 16106659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 10 - 194
Target Start/End: Original strand, 18398890 - 18399076
Alignment:
10 tcattatcaacccatttt-acaaaaccactaacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaacaaca 108  Q
    |||| ||||||||||||| |||||||||  |||||||| |||||||||  ||  | |||||||| ||||| |||||||||||||||||||||||||||||    
18398890 tcataatcaacccatttttacaaaaccaacaacaacaactcatttcttatcacaattcatgaattatgcacacccaagccatgaattatcatcaacaaca 18398989  T
109 tgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaa-ttgagcatattt 194  Q
    | || || ||| ||||||||||||||| |||||| || ||||||||||||||||||||  |||||||||| ||| ||||||||||||    
18398990 tcacttagcaacaacaacatcaattgaacatgaatctcatcacaattcaacaacaacatagcataattcaacaatttgagcatattt 18399076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 63 - 199
Target Start/End: Complemental strand, 13014949 - 13014814
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    ||||| ||||||||||| ||||||||| |||||||||||||||||||||| || ||  | ||||| ||||||||| ||||||||||||||||||| ||||    
13014949 aatcaagaatcatgcaa-cccaagccacgaattatcatcaacaacatgacttaacatcagcaacaacaattgatcttgaaacttatcacaattcatcaac 13014851  T
163 aacaatgcataattcaccaattgagcatattttcaac 199  Q
    |||||||||||||||||||||||||||||||| ||||    
13014850 aacaatgcataattcaccaattgagcatatttccaac 13014814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 58 - 191
Target Start/End: Original strand, 26089736 - 26089869
Alignment:
58 acaacaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattca 157  Q
    |||||||| |||||||||||| |||||| |||||||||| |||| | ||||| || || ||| ||||||||| |||||||||||||||||||||||||||    
26089736 acaacaattatgaatcatgcatacccaaaccatgaattagcatccataacatcacttaacaacaacaacatctattgatcatgaaacttatcacaattca 26089835  T
158 acaacaacaatgcataattcaccaattgagcata 191  Q
     ||||||| |||||||||||||||||||||||||    
26089836 tcaacaaccatgcataattcaccaattgagcata 26089869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 67 - 200
Target Start/End: Original strand, 18777156 - 18777289
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||||||| ||||||||||||||||| |||| | ||||| || || ||| ||||||||  ||||||||||||||||||||||||||| ||||||||    
18777156 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacattcattgatcatgaaacttatcacaattcatcaacaaca 18777255  T
167 atgcataattcaccaattgagcatattttcaaca 200  Q
      |||||||||||||||||| |||||||||||||    
18777256 tagcataattcaccaattgaacatattttcaaca 18777289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 69 - 186
Target Start/End: Complemental strand, 25744448 - 25744331
Alignment:
69 gaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaat 168  Q
    |||| |||||||||||||||||||||||||||||||||||||||  | ||| ||||||| || ||||||||||||| |||||||||||| ||||||||||    
25744448 gaattatgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaacaacatttgatcatgaaacatatcacaattcatcaacaacaat 25744349  T
169 gcataattcaccaattga 186  Q
    ||||||||||||| ||||    
25744348 gcataattcaccacttga 25744331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 23 - 184
Target Start/End: Complemental strand, 18381965 - 18381803
Alignment:
23 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaa 121  Q
    |||| |||||||||| |||||||| ||||||||   |||||| |||||||| ||| | ||||||||||||||| |||| ||||||||| || || ||| |    
18381965 atttcacaaaaccaccaacaacaactcatttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaacaacaacatcacttagcaaca 18381866  T
122 acaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaatt 184  Q
    |||||||||||||| |||||  |||||||||||||||||||||||| |||||||||| |||||    
18381865 acaacatcaattgaacatgactcttatcacaattcaacaacaacaaagcataattcaacaatt 18381803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 67 - 200
Target Start/End: Original strand, 18570289 - 18570422
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||||||| ||||| ||||||||||| |||| | ||||| || || ||| ||| || || ||||||||||||||||||||||||||| ||||||||    
18570289 atgaatcatgcatacccaggccatgaattagcatccataacatcacttaacaacaactacttctattgatcatgaaacttatcacaattcatcaacaaca 18570388  T
167 atgcataattcaccaattgagcatattttcaaca 200  Q
      ||||||||||||||||||||||||||||||||    
18570389 tagcataattcaccaattgagcatattttcaaca 18570422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 31 - 218
Target Start/End: Complemental strand, 25367511 - 25367323
Alignment:
31 aaaccactaacaacaattcatttcttgacaacaat-catgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatc 129  Q
    |||| ||||||||||  ||||||||   ||||||| ||||||||||||| |||||||||||||||||||   |||||||| || || ||| |||||||||    
25367511 aaactactaacaacatctcatttctcatcaacaattcatgaatcatgcacacccaagccatgaattatcgataacaacatcacttagcaacaacaacatc 25367412  T
130 aattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaa-ttgagcatattttcaacataaaccaacttctcatac 218  Q
    |||||| |||||| |||||||||||||||||||||||   || |||||| ||| ||||||||| |||||||||||||||  |||||||||    
25367411 aattgaacatgaatcttatcacaattcaacaacaacataacacaattcaacaatttgagcata-tttcaacataaaccactttctcatac 25367323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 67 - 191
Target Start/End: Original strand, 23994933 - 23995057
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||||||| ||||||||||||||||| |||  | ||||| || || ||| ||||||||| |||||||||||||| |||||||||||| |||||||     
23994933 atgaatcatgcatacccaagccatgaattagcattcataacatcacttaacaacaacaacatctattgatcatgaaacatatcacaattcatcaacaacc 23995032  T
167 atgcataattcaccaattgagcata 191  Q
    |||||||||||||||||||||||||    
23995033 atgcataattcaccaattgagcata 23995057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 58 - 191
Target Start/End: Complemental strand, 18002750 - 18002617
Alignment:
58 acaacaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattca 157  Q
    |||||||  |||||||||||| ||||||||||||||||| |||| | ||| | || || ||| ||||||||| |||||||||||||| ||||||||||||    
18002750 acaacaagtatgaatcatgcatacccaagccatgaattagcatccataacgtcacttaacaacaacaacatctattgatcatgaaacatatcacaattca 18002651  T
158 acaacaacaatgcataattcaccaattgagcata 191  Q
     ||||||| |||||||||||| ||||||||||||    
18002650 tcaacaaccatgcataattcatcaattgagcata 18002617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 23 - 191
Target Start/End: Complemental strand, 19983581 - 19983412
Alignment:
23 attttacaaaaccactaacaacaattcatttcttgacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaa 121  Q
    |||| |||||||||| ||||||||| |||||||  ||||||| | ||||||||||||||||||||||||| || ||||||||||| |||||  | ||| |    
19983581 atttcacaaaaccaccaacaacaatccatttctcaacaacaaaccatgaatcatgcaaacccaagccatgtatcatcatcaacaatatgactaaacaaca 19983482  T
122 acaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcata 191  Q
    |||||| | | | | |||||||| |||||||||||| ||||||  ||||||||||||| |||||||||||    
19983481 acaacaaccactaaccatgaaacatatcacaattcatcaacaatcatgcataattcactaattgagcata 19983412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 67 - 191
Target Start/End: Complemental strand, 15742468 - 15742341
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgac---atatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaaca 163  Q
    |||||||||||| ||||||||||||||||| |||  | ||||| ||   | | ||| ||||||||| |||||||||||||| |||||||||||| |||||    
15742468 atgaatcatgcatacccaagccatgaattagcattcataacatcacttaacaacaacaacaacatctattgatcatgaaacatatcacaattcatcaaca 15742369  T
164 acaatgcataattcaccaattgagcata 191  Q
    || |||||||||||||||||||||||||    
15742368 accatgcataattcaccaattgagcata 15742341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 16 - 184
Target Start/End: Complemental strand, 22362054 - 22361885
Alignment:
16 tcaacccattttacaaaaccactaacaacaattcatttcttgacaacaat-catgaatcatgcaaacccaagccatgaattatcatcaacaacatgacat 114  Q
    ||||||||||||||||||| |  |||||||| ||| ||||   || |||| ||||||| ||| | ||||||||||||||| |||| |||||| || || |    
22362054 tcaacccattttacaaaactaacaacaacaactcaattctcatcatcaattcatgaattatgaacacccaagccatgaatcatcaacaacaatatcactt 22361955  T
115 atcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaatt 184  Q
    | ||| ||||||||||||||| ||||||  | ||||||||||||||||||||  |||||||||| |||||    
22361954 agcaacaacaacatcaattgaacatgaatttcatcacaattcaacaacaacatagcataattcatcaatt 22361885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 74 - 194
Target Start/End: Complemental strand, 28195324 - 28195202
Alignment:
74 atgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaa-cttatcacaattcaacaacaacaatgcat 172  Q
    |||||||| ||||||||||||||||||||||||||| || || ||| ||| ||| ||||||||||| ||| || ||||||||||||||||| ||  ||||    
28195324 atgcaaactcaagccatgaattatcatcaacaacatcacttagcaacaaccacaacaattgatcataaaatctcatcacaattcaacaacatcatggcat 28195225  T
173 aattc-accaattgagcatattt 194  Q
    ||||| || ||||||||| ||||    
28195224 aattcaactaattgagcacattt 28195202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 62 - 166
Target Start/End: Original strand, 25651242 - 25651346
Alignment:
62 caatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaa 161  Q
    ||||||||| | ||| | ||||||||||||||| |||| |||||| || || || ||| ||||||||||||||| |||||| || |||| ||||||||||    
25651242 caatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatgaatctcatcataattcaacaa 25651341  T
162 caaca 166  Q
    |||||    
25651342 caaca 25651346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 4991015 - 4991150
Alignment:
1 caaacttcttcattatcaacccattttacaaaaccactaacaacaattca-tttcttgacaacaatcatgaatcatgcaaacccaagccatgaattatca 99  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||| ||| |||||  |||||||||||||   ||| | ||||||||||  | | || |    
4991015 caaacttcttctttatcaacccattttacaaaaccaccaacaacaactcattttctcaacaacaatcatgatatatgaacacccaagccaaaattcatga 4991114  T
100 tcaacaacatgacatatcaaaaacaacatcaattga 135  Q
    ||||||||||  |  | ||| |||||||||||||||    
4991115 tcaacaacatatctcagcaacaacaacatcaattga 4991150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 63 - 166
Target Start/End: Original strand, 25919619 - 25919722
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||| ||| | ||||||||||||||| |||| ||||||||| | ||| ||| ||||||||||||||| ||||   || |||| |||||||||||    
25919619 aatcatgaattatgaatacccaagccatgaatcatcaacaacaacatcatatagcaacaacaacatcaattgaacatggttctcatcataattcaacaac 25919718  T
163 aaca 166  Q
    ||||    
25919719 aaca 25919722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 65 - 191
Target Start/End: Original strand, 33324701 - 33324828
Alignment:
65 tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaa 164  Q
    |||||||| ||| | ||||||||||||||| |||| ||||||||| || || ||| ||||||||||||||| ||||   || |||| |||||||| ||||    
33324701 tcatgaattatgaatacccaagccatgaatcatcaacaacaacatcacttagcaataacaacatcaattgaacatggttctcatcataattcaaccacaa 33324800  T
165 caatgcataattca-ccaattgagcata 191  Q
     |  |||||||||| |||||||||||||    
33324801 tatagcataattcatccaattgagcata 33324828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 65 - 191
Target Start/End: Complemental strand, 35136251 - 35136124
Alignment:
65 tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaa 164  Q
    |||||||| ||| | ||||||||||||||| |||| ||||||||| || || ||| ||||||||||||||| ||||   || |||| |||||||| ||||    
35136251 tcatgaattatgaatacccaagccatgaatcatcaacaacaacatcacttagcaataacaacatcaattgaacatggttctcatcataattcaaccacaa 35136152  T
165 caatgcataattca-ccaattgagcata 191  Q
     |  |||||||||| |||||||||||||    
35136151 tatagcataattcatccaattgagcata 35136124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 63 - 184
Target Start/End: Original strand, 21623174 - 21623295
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||| ||| | ||||||||||||| | || | || |||||| || || ||| |||||||||||| || |||||  |||| ||||||||||||||    
21623174 aatcatgaattatgaatacccaagccatgactcattaacatcaacatcacttagcaacaacaacatcaatagaacatgattcttaccacaattcaacaac 21623273  T
163 aacaatgcataattcaccaatt 184  Q
    ||||  |||||||||| |||||    
21623274 aacatagcataattcaacaatt 21623295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 189
Target Start/End: Complemental strand, 35009692 - 35009569
Alignment:
65 tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaa 164  Q
    |||||||| ||||| |||||||| |||| | |||| ||||||||| |  || ||| ||||||||||||||| ||||   || |||| |||||||||||||    
35009692 tcatgaat-atgcatacccaagcaatgattcatcaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatcataattcaacaacaa 35009594  T
165 caatgcataattcaccaattgagca 189  Q
    ||  ||| |||||||||||||||||    
35009593 catagcaaaattcaccaattgagca 35009569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 17083483 - 17083373
Alignment:
1 caaacttcttcattatcaacccatttt-acaaaaccactaacaacaattcatttcttgacaac-aatcatgaatcatgcaaacccaagccatgaattatc 98  Q
    ||||||||||||||||||||||||||| |||||| ||  |||||||| ||||||||   || | |||||||| | ||| | ||||||||||||||| |||    
17083483 caaacttcttcattatcaacccattttcacaaaaacaacaacaacaactcatttctaatcatcaaatcatgatttatgaacacccaagccatgaatcatc 17083384  T
99 atcaacaacat 109  Q
    | |||||||||    
17083383 aacaacaacat 17083373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 191
Target Start/End: Complemental strand, 15079932 - 15079820
Alignment:
80 acccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattca- 178  Q
    |||||| |||||||| |||| ||||||||| || || ||| ||||| ||||||||| ||||   || |||| ||||||||||||| |  ||||||||||     
15079932 acccaaaccatgaatcatcaacaacaacatcacttagcaataacaatatcaattgaacatggttctcatcataattcaacaacaatatagcataattcac 15079833  T
179 ccaattgagcata 191  Q
    |||||||||||||    
15079832 ccaattgagcata 15079820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 166
Target Start/End: Complemental strand, 33538647 - 33538507
Alignment:
27 tacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaa 125  Q
    ||||||||||  |||||||| ||||||||   || ||| |||||| | ||| | || |||||||||||| |||| |||||| || || || ||| |||||    
33538647 tacaaaaccaacaacaacaactcatttctcatcatcaaatcatgatttatgaacactcaagccatgaatcatcaacaacaatatcacttagcaataacaa 33538548  T
126 catcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||| | |||||  || ||||||||||||||| ||||    
33538547 catcaattaaacatgattctcatcacaattcaacaataaca 33538507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 184
Target Start/End: Original strand, 34966890 - 34966994
Alignment:
80 acccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcac 179  Q
    |||||||| |||||| |||| |||||| ||  | || ||| ||||||||||||| | |||||  || ||||||| ||||||||||||  ||||||||||     
34966890 acccaagctatgaatcatcaacaacaatatctcttaacaacaacaacatcaattaaacatgattctcatcacaaatcaacaacaacatagcataattcaa 34966989  T
180 caatt 184  Q
    |||||    
34966990 caatt 34966994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 191
Target Start/End: Complemental strand, 16888031 - 16887904
Alignment:
65 tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaa 164  Q
    |||||||| ||| | ||||||||||||||| || | ||| ||||| |||||   | ||||| ||||||||| ||||   || |||| |||||||||||||    
16888031 tcatgaattatgtatacccaagccatgaatcattaacaataacatcacatagtgacaacaaaatcaattgaacatggttctcatcataattcaacaacaa 16887932  T
165 caatgcataattca-ccaattgagcata 191  Q
    ||   ||||||||| |||||||||||||    
16887931 cataacataattcacccaattgagcata 16887904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 166
Target Start/End: Complemental strand, 17083386 - 17083335
Alignment:
115 atcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    ||||| ||||||||||||| | |||||| || ||||||||||||||||||||    
17083386 atcaacaacaacatcaattaaacatgaatctcatcacaattcaacaacaaca 17083335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 187
Target Start/End: Original strand, 29665938 - 29666004
Alignment:
121 aacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgag 187  Q
    ||||||||||||||| |||||| | |||| || ||||||||||||   ||| |||||||||||||||    
29665938 aacaacatcaattgaacatgaatcatatctcatttcaacaacaacttagcaaaattcaccaattgag 29666004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 189
Target Start/End: Original strand, 27740907 - 27740971
Alignment:
125 acatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagca 189  Q
    ||||||||||| |||||| | |||| |||||||||||| ||   ||| |||||||||||||||||    
27740907 acatcaattgaacatgaatcatatctcaattcaacaacgacttagcaaaattcaccaattgagca 27740971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 135; Significance: 2e-70; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 23 - 200
Target Start/End: Original strand, 34395222 - 34395400
Alignment:
23 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaa 121  Q
    |||| |||||||||| ||||||||| |||||||  ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |    
34395222 atttcacaaaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaactcaagccatgaattatcatcaacaacatgacatagcaaca 34395321  T
122 acaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatattttcaaca 200  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
34395322 acaacatcaattgatcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcatattttcaaca 34395400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 39 - 218
Target Start/End: Original strand, 16732150 - 16732330
Alignment:
39 aacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatc 137  Q
    |||||||  ||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||| |||||||||||||    
16732150 aacaacatctcatttctcaacaacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttagcaacaacgacatcaattgatc 16732249  T
138 atgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatattttcaacataaaccaacttctcatac 218  Q
    |||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||    
16732250 atgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcatattttcaacatataccaacttctcatac 16732330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 63 - 217
Target Start/End: Complemental strand, 45459096 - 45458942
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
45459096 aatcatgaatcatgcaaacccaagccatggattatcttcaacaacatgacatatcaacaacaacatcaattggtcatgaaacttatcacaattcaacaac 45458997  T
163 aacaatgcataattcaccaattgagcatattttcaacataaaccaacttctcata 217  Q
    | ||| |||||||||||||||||| ||||| || |||||| || |||||||||||    
45458996 agcaaagcataattcaccaattgaacatatctttaacatatacaaacttctcata 45458942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 66 - 200
Target Start/End: Complemental strand, 23270172 - 23270038
Alignment:
66 catgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaac 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||| ||||||||||||||| |||||||    
23270172 catgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttaacaacaacaacatcaattgatcatgatacttatcacaattcatcaacaac 23270073  T
166 aatgcataattcaccaattgagcatattttcaaca 200  Q
    ||||||||||||| |||||||| ||||||||||||    
23270072 aatgcataattcatcaattgagtatattttcaaca 23270038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 66 - 200
Target Start/End: Original strand, 44055924 - 44056058
Alignment:
66 catgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaac 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |  | | | ||||||||||||||||||||||||||||||||||||| ||||||     
44055924 catgaatcatgcaaacccaagccatgaattatcatcaacaacatggctaaaccacaacaacatcaattgatcatgaaacttatcacaattcatcaacaat 44056023  T
166 aatgcataattcaccaattgagcatattttcaaca 200  Q
    |||||||||||||||||||||||||||||||||||    
44056024 aatgcataattcaccaattgagcatattttcaaca 44056058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 67 - 200
Target Start/End: Complemental strand, 21959700 - 21959567
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||  | ||| ||||||||||||||||||||||||||||||||||||| ||||||||    
21959700 atgaatcatgcaagcccaagccatgaattatcatcaacaacatgactaaacaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaaca 21959601  T
167 atgcataattcaccaattgagcatattttcaaca 200  Q
      ||||||||||||||||||||||||||||||||    
21959600 tagcataattcaccaattgagcatattttcaaca 21959567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 63 - 200
Target Start/End: Complemental strand, 820153 - 820020
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| || ||| |||||||   ||||||||||||||||||||||||||| ||||    
820153 aatcatgaatcatgcaa-cccaagccatgaattatcatcaacaacatgacttaacaacaacaaca---attgatcatgaaacttatcacaattcatcaac 820058  T
163 aacaatgcataattcaccaattgagcatattttcaaca 200  Q
    ||||||||||||||||||||||||||||||||||||||    
820057 aacaatgcataattcaccaattgagcatattttcaaca 820020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 63 - 197
Target Start/End: Complemental strand, 55376838 - 55376704
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |  || ||| ||||||| ||||||||||||||||||||||||||||| ||||    
55376838 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacataatttaacaacaacaacaacaattgatcatgaaacttatcacaattcatcaac 55376739  T
163 aacaatgcataattcaccaattgagcatattttca 197  Q
    ||||||| ||||||||||||||||| |||||||||    
55376738 aacaatgtataattcaccaattgagtatattttca 55376704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 63 - 218
Target Start/End: Complemental strand, 12837441 - 12837286
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||||||||| ||||||||||||||||| |||| | ||||| || || ||| ||||||||| ||||| ||||||||||||||||||| ||||||    
12837441 aatcatgaatcatgcatacccaagccatgaattaacatccataacatcacttaacaacaacaacatccattgaccatgaaacttatcacaatttaacaac 12837342  T
163 aacaatgcataattcaccaattgagcatattttcaacataaaccaacttctcatac 218  Q
    ||||  |||||||||||||||||||||||||||||||||| ||||| |||||||||    
12837341 aacatagcataattcaccaattgagcatattttcaacatataccaatttctcatac 12837286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 79 - 200
Target Start/End: Original strand, 30457925 - 30458046
Alignment:
79 aacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattca 178  Q
    |||||||||||||||||||||||||| ||||||| || ||| ||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||    
30457925 aacccaagccatgaattatcatcaaccacatgacttaacaacaacaacaacaattgatcatgaaacttatcacaattcatcaacaacaatgcgtaattca 30458024  T
179 ccaattgagcatattttcaaca 200  Q
    ||||||||||||||||||||||    
30458025 ccaattgagcatattttcaaca 30458046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 24 - 218
Target Start/End: Complemental strand, 13809791 - 13809596
Alignment:
24 ttttacaaaaccactaacaacaattcatttcttgacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaa 122  Q
    |||||| |||| ||||||||||  ||||||||  ||||| |||||||||||||||| | |||||||||||||||||||||||||||| |  || ||| ||    
13809791 ttttaccaaactactaacaacatctcatttctcaacaaccaatcatgaatcatgcatatccaagccatgaattatcatcaacaacatcaattagcaacaa 13809692  T
123 caacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattc-accaattgagcatattttcaacataaaccaacttctcatac 218  Q
    |||||||||||||||||||| |||||||||||||||||||||||  ||||||||| || ||||||||||| |||||||||| ||||  |||||||||    
13809691 caacatcaattgatcatgaatcttatcacaattcaacaacaacatagcataattcaactaattgagcata-tttcaacatataccattttctcatac 13809596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 69 - 197
Target Start/End: Complemental strand, 53704968 - 53704840
Alignment:
69 gaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaat 168  Q
    |||| |||||||||||||||||||||||||||||||||||||||  | ||| ||||||| |||||||||||||||| |||||||||||| ||||||| ||    
53704968 gaattatgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaaccat 53704869  T
169 gcataattcaccaattgagcatattttca 197  Q
    |||||||||||||||||||||||||||||    
53704868 gcataattcaccaattgagcatattttca 53704840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 10 - 191
Target Start/End: Original strand, 14951713 - 14951896
Alignment:
10 tcattatcaacccatttt-acaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaac 107  Q
    |||| ||||||||||||| || ||| ||| ||||||||| |||||||  ||||||| ||||||||||||||||||||||||||  || |||||||||||     
14951713 tcataatcaacccattttcaccaaaacaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagccatatatcatcatcaacaat 14951812  T
108 atgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcata 191  Q
    |||||  |  || ||||||| | |||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||    
14951813 atgactaaataacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 14951896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 69 - 197
Target Start/End: Complemental strand, 53907931 - 53907806
Alignment:
69 gaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaat 168  Q
    |||| |||||||||||||||||||||||||||||||||||||||  ||||| |||||||   |||||||||||||| | |||||||||| ||||||||||    
53907931 gaattatgcaaacccaagccatgaattatcatcaacaacatgactaatcaacaacaaca---attgatcatgaaacatttcacaattcatcaacaacaat 53907835  T
169 gcataattcaccaattgagcatattttca 197  Q
    ||||||||||||||||| |||||||||||    
53907834 gcataattcaccaattgggcatattttca 53907806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 67 - 197
Target Start/End: Complemental strand, 30232733 - 30232603
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||| ||||| ||||||||||||||||| |||| | ||||| || || ||| ||||||||| ||||||||||||||||||||||||| ||||||||||    
30232733 atgaataatgcatacccaagccatgaattaacatccataacatcacttaacaacaacaacatccattgatcatgaaacttatcacaatttaacaacaaca 30232634  T
167 atgcataattcaccaattgagcatattttca 197  Q
      |||||||||||||||||||||||||||||    
30232633 tagcataattcaccaattgagcatattttca 30232603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 69 - 197
Target Start/End: Original strand, 44346839 - 44346967
Alignment:
69 gaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaat 168  Q
    |||| ||||||||||||||||||||||||||||||| |||| ||  | ||| ||||||| || ||||||||||||| ||||||||||||  |||||||||    
44346839 gaattatgcaaacccaagccatgaattatcatcaacgacatcactaaacaacaacaacaacatttgatcatgaaacatatcacaattcatgaacaacaat 44346938  T
169 gcataattcaccaattgagcatattttca 197  Q
    | |||||||||||||||||||||||||||    
44346939 gtataattcaccaattgagcatattttca 44346967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 79 - 197
Target Start/End: Complemental strand, 8872699 - 8872578
Alignment:
79 aacccaagccatgaattatcatcaacaacatgac---atatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataat 175  Q
    |||||||||||||| |||||||||||||||||||   | | ||| ||||||| |||||||||||||||| |||||||||||| ||||||||| |||||||    
8872699 aacccaagccatgagttatcatcaacaacatgactaaacaacaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaacaacgcataat 8872600  T
176 tcaccaattgagcatattttca 197  Q
    ||||||||||||||||||||||    
8872599 tcaccaattgagcatattttca 8872578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 23 - 191
Target Start/End: Complemental strand, 25119498 - 25119328
Alignment:
23 attttacaaaaccactaacaacaattcatttcttgacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaa 120  Q
    |||| |||||||||| ||||||||| |||||||  |||||||  | ||||||||||||||||||||||||| || || |||||||| |||||  | |||     
25119498 atttcacaaaaccaccaacaacaatccatttctcaacaacaaaattatgaatcatgcaaacccaagccatgtatcattatcaacaatatgactaaacaac 25119399  T
121 aacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcata 191  Q
    ||||||| | |||||||||||||| |||||||||||| ||| ||| |||||||||||||||||||| ||||    
25119398 aacaacaaccattgatcatgaaacatatcacaattcatcaaaaaccatgcataattcaccaattgatcata 25119328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 23 - 191
Target Start/End: Complemental strand, 5682817 - 5682648
Alignment:
23 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaa- 120  Q
    |||| |||||||||| ||||||||| |||||||  ||||||| |||||||||||||||||||||| |||  || ||||||||||| |||| |||  |||     
5682817 atttcacaaaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagacatatatcatcatcaacaatatga-ataaaaaac 5682719  T
121 aacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcata 191  Q
    ||||||| | | | |||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||    
5682718 aacaacaaccaataatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 5682648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 67 - 191
Target Start/End: Complemental strand, 15272557 - 15272433
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||||||| ||||||||||||||||| |||  | ||||| || || ||| ||||||||| |||||||||| ||| |||||||||||| |||||||     
15272557 atgaatcatgcatacccaagccatgaattagcattcataacatcacttaacaacaacaacatctattgatcatggaacatatcacaattcatcaacaacc 15272458  T
167 atgcataattcaccaattgagcata 191  Q
    |||||||||||||||||||||||||    
15272457 atgcataattcaccaattgagcata 15272433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 63 - 218
Target Start/End: Complemental strand, 52265749 - 52265594
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||| ||| | ||||||||||||||| |||| || ||| || || || ||| ||||||||||||||| |||||| |||||||||||||||||||    
52265749 aatcatgaattatgaacacccaagccatgaatcatcaacatcaatatcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaac 52265650  T
163 aacaatgcataattcaccaa-ttgagcatattttcaacataaaccaacttctcatac 218  Q
    |||| ||||||||||| ||| ||||||||| |||||||||| ||||  |||||||||    
52265649 aacattgcataattcaacaatttgagcata-tttcaacatataccactttctcatac 52265594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 31 - 207
Target Start/End: Complemental strand, 18494602 - 18494425
Alignment:
31 aaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatc 129  Q
    ||||||| |||||||  ||||||||  ||||||| |||||||||||||| ||||||||||||| ||| |||||||||||| || || ||| |||| || |    
18494602 aaaccaccaacaacatctcatttctcaacaacaagtcatgaatcatgcatacccaagccatgagttaccatcaacaacatcacttaacaacaacagcaac 18494503  T
130 aattgatcatgaaacttatcacaattcaacaacaacaatgcataattc-accaattgagcatattttcaacataaacca 207  Q
    ||||||||||||| |||| ||||||||||||||||||  |||| || | |||||||||||| | |||||||||| ||||    
18494502 aattgatcatgaatcttaacacaattcaacaacaacatagcatcatccaaccaattgagcaca-tttcaacatatacca 18494425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 70 - 207
Target Start/End: Original strand, 27960984 - 27961121
Alignment:
70 aatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatg 169  Q
    ||||||||| |||||| ||||||||||||||||||||||| || || ||| |||||||||||||||||||||| ||||| ||||||||||||||| |       
27960984 aatcatgcatacccaaaccatgaattatcatcaacaacatcacttaacaacaacaacatcaattgatcatgaatcttataacaattcaacaacaatataa 27961083  T
170 cataattc-accaattgagcatattttcaacataaacca 207  Q
    |||||||| ||||||| |||||| |||||||||| ||||    
27961084 cataattcaaccaatttagcata-tttcaacatatacca 27961121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 63 - 184
Target Start/End: Original strand, 15044834 - 15044955
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||| | ||| | ||||||||||||||| |||||||||||||| || || ||| ||||||||||||||| |||||| |||||||||||||||||||    
15044834 aatcatgatttatgaacacccaagccatgaatcatcatcaacaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaac 15044933  T
163 aacaatgcataattcaccaatt 184  Q
    ||||  |||||||||| |||||    
15044934 aacatagcataattcatcaatt 15044955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 63 - 176
Target Start/End: Complemental strand, 15109590 - 15109477
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||| | ||| | ||||||||||||||| |||||||||||||| || || ||| ||||||||||||||| |||||| |||||||||||||||||||    
15109590 aatcatgatttatgaacacccaagccatgaatcatcatcaacaacattacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaac 15109491  T
163 aacaatgcataatt 176  Q
    ||||  ||||||||    
15109490 aacatagcataatt 15109477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 16522761 - 16522896
Alignment:
1 caaacttcttcattatcaacccattttacaaaaccactaacaacaattca-tttcttgacaacaatcatgaatcatgcaaacccaagccatgaattatca 99  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||| ||| |||||  |||||||||||||   ||| | ||||||||||| | | || |    
16522761 caaacttcttctttatcaacccattttacaaaaccaccaacaacaactcattttctcaacaacaatcatgatatatgaacacccaagccataattcataa 16522860  T
100 tcaacaacatgacatatcaaaaacaacatcaattga 135  Q
    ||||||||||  |  | ||| |||||||||||||||    
16522861 tcaacaacatatctcagcaacaacaacatcaattga 16522896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 166
Target Start/End: Complemental strand, 19822065 - 19821914
Alignment:
16 tcaacccattttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacat 114  Q
    ||||| |||||||||||  ||| || ||||| ||||||||   |||||| |||||||| ||| | ||||||||||||||| |||| ||||||||| ||||    
19822065 tcaactcattttacaaagtcaccaaaaacaactcatttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaacaacaacatcacat 19821966  T
115 atcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    | ||| ||||||||||||||| ||||   || |||| |||||||||| ||||    
19821965 agcaacaacaacatcaattgaacatggttctcatcataattcaacaataaca 19821914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 23 - 184
Target Start/End: Complemental strand, 41166228 - 41166066
Alignment:
23 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaa 121  Q
    |||| ||||||||||  ||||||| ||||||||   |||||| |||| | | ||| | ||||||||||||| | |||| ||||||||| || || ||| |    
41166228 atttcacaaaaccacccacaacaactcatttctcatcaacaaatcataagttatgaatacccaagccatgattcatcaacaacaacatcacttagcaaca 41166129  T
122 acaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaatt 184  Q
    |||||||||||||| |||||  |||  ||||||||||||||||||  |||||||||| |||||    
41166128 acaacatcaattgaacatgactcttgccacaattcaacaacaacatagcataattcaacaatt 41166066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 166
Target Start/End: Complemental strand, 37957314 - 37957163
Alignment:
16 tcaacccattttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacat 114  Q
    |||||||||||||||||  ||| |||||||| |||||| |   |||||| |||||||| ||||| ||||||||| ||||||||||  |||||||| || |    
37957314 tcaacccattttacaaagtcaccaacaacaactcatttatcatcaacaaatcatgaattatgcacacccaagccgtgaattatcaataacaacatcactt 37957215  T
115 atcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    | ||  ||| ||||||||||| |||||| || | || ||||||||| |||||    
37957214 agcagcaaccacatcaattgaacatgaatctcagcataattcaacatcaaca 37957163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 9295637 - 9295772
Alignment:
1 caaacttcttcattatcaacccattttacaaaaccactaacaacaattca-tttcttgacaacaatcatgaatcatgcaaacccaagccatgaattatca 99  Q
    ||||||||||| |||||||| ||||||||| |||||| |||||||| ||| |||||  |||||||||||||   ||| | ||||||||||| | | || |    
9295637 caaacttcttctttatcaactcattttacataaccaccaacaacaactcattttctcaacaacaatcatgatatatgaacacccaagccataattcatta 9295736  T
100 tcaacaacatgacatatcaaaaacaacatcaattga 135  Q
    ||||||||||  |  | ||| |||||||||||||||    
9295737 tcaacaacatatctcagcaacaacaacatcaattga 9295772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 115 - 189
Target Start/End: Complemental strand, 10104454 - 10104380
Alignment:
115 atcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagca 189  Q
    ||||| ||||||||||||||| |||||| | |||| |||||||||||||||   ||| |||||||||||||||||    
10104454 atcaacaacaacatcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagca 10104380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 7186146 - 7185982
Alignment:
1 caaacttcttcattatcaacccatttt-acaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatc 98  Q
    ||||||||||||||||||||||||||| |||||| ||   ||||||| |||| |||   || ||| |||||| | ||  | ||||||||||||||| |||    
7186146 caaacttcttcattatcaacccattttcacaaaaaca---acaacaactcatatctcatcatcaaatcatgatttataaacacccaagccatgaatcatc 7186050  T
99 atcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    | ||| || ||  | || ||| ||||||||||||| | |||||| || ||||||||||||||||||||    
7186049 aacaataatatctcttagcaacaacaacatcaattaaacatgaatctcatcacaattcaacaacaaca 7185982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 194
Target Start/End: Original strand, 14901197 - 14901370
Alignment:
23 attttacaaaaccactaacaacaattcatttcttgacaacaat-catgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaa 121  Q
    ||||||||||||||| ||||||||  |||||||   || |||| ||||||| ||||| ||||| | ||||||| |||| ||||| ||| || || ||| |    
14901197 attttacaaaaccaccaacaacaacccatttctcatcatcaattcatgaattatgcacacccatgtcatgaatcatcaacaacagcatcacttagcaaca 14901296  T
122 acaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcacca-attgagcatattt 194  Q
    ||||||||||||||  ||||  |||| |||||||||| || ||||   ||||||||| ||  ||||||||||||    
14901297 acaacatcaattgaatatgattcttaccacaattcaataataacatatcataattcaacattttgagcatattt 14901370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 189
Target Start/End: Complemental strand, 15675328 - 15675219
Alignment:
80 acccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcac 179  Q
    |||||||| |||| | |||| ||||||||| |  || ||| || |||||||||||| |||||| | |||| |||||||||||||||   ||| |||||||    
15675328 acccaagcaatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcac 15675229  T
180 caattgagca 189  Q
    ||||||||||    
15675228 caattgagca 15675219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 164
Target Start/End: Original strand, 18276440 - 18276541
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||| | ||| | ||||||||||| ||| |||| |||||| || || |  ||| ||||||||||||||| |||||| || ||||||||||||||||    
18276440 aatcatgatttatgaacacccaagccatcaatcatcaacaacaatatcactttgcaacaacaacatcaattgaacatgaatctcatcacaattcaacaac 18276539  T
163 aa 164  Q
    ||    
18276540 aa 18276541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 115 - 194
Target Start/End: Complemental strand, 47535254 - 47535174
Alignment:
115 atcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaa-ttgagcatattt 194  Q
    ||||| |||||| |||||||| |||||  ||||||| |||||||||||||||  |||||||||| ||| ||||||||||||    
47535254 atcaacaacaacgtcaattgaacatgattcttatcataattcaacaacaacatagcataattcatcaatttgagcatattt 47535174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 191
Target Start/End: Original strand, 31115653 - 31115764
Alignment:
80 acccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcac 179  Q
    |||||||| |||| | |||| ||||||||| |  || ||| || |||||||||||| |||||| | |||| |||||||||||||||   | | |||||||    
31115653 acccaagcaatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaattcaacaacaacttaggaaaattcac 31115752  T
180 caattgagcata 191  Q
    ||||||||||||    
31115753 caattgagcata 31115764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 197
Target Start/End: Complemental strand, 40885758 - 40885676
Alignment:
115 atcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatattttca 197  Q
    ||||| ||||||||||||||| |||||| | |||| ||||||||||| |||   ||| | ||||||||||||||||| |||||    
40885758 atcaacaacaacatcaattgaacatgaatcatatctcaattcaacaataacttagcaaagttcaccaattgagcataatttca 40885676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 184
Target Start/End: Original strand, 38764715 - 38764836
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||| | ||| | ||||||||||||||| |||| |||||| ||  | || ||| ||||||||||||| | |||||  || |||| |||| ||||||    
38764715 aatcatgatttatgaacacccaagccatgaatcatcaacaacaatattccttaacaacaacaacatcaattaaacatgattctcatcataattgaacaac 38764814  T
163 aacaatgcataattcaccaatt 184  Q
    ||||  |||||||||| |||||    
38764815 aacatcgcataattcaacaatt 38764836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 184
Target Start/End: Complemental strand, 18238381 - 18238277
Alignment:
80 acccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcac 179  Q
    |||||||| |||||| |||| |||||| ||  | || ||| ||||||||||||| | |||||  || ||||||||||||||||||||  ||| ||||||     
18238381 acccaagctatgaatcatcaacaacaatatctcttaacaacaacaacatcaattaaacatgattctcatcacaattcaacaacaacatagcacaattcaa 18238282  T
180 caatt 184  Q
    |||||    
18238281 caatt 18238277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 165
Target Start/End: Complemental strand, 15013523 - 15013421
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||| | ||| | ||||||||||||||| |||| |||||| ||  | || ||| ||||| ||||||| | |||||  || ||||||||||||||||    
15013523 aatcatgatttatgaacacccaagccatgaatcatcaacaacaatatctcttaacaacaacaatatcaattaaacatgattctcatcacaattcaacaac 15013424  T
163 aac 165  Q
    |||    
15013423 aac 15013421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 166
Target Start/End: Original strand, 54398406 - 54398492
Alignment:
80 acccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    ||||||||||||||| |||| |||||| ||  | || ||| ||||||||||||| | |||||  || ||||||| ||||||||||||    
54398406 acccaagccatgaatcatcaacaacaatatctcttaacaacaacaacatcaattaaacatgattctcatcacaaatcaacaacaaca 54398492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 184
Target Start/End: Complemental strand, 13590298 - 13590194
Alignment:
80 acccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcac 179  Q
    |||||||| |||||| |||| ||| || ||  | || ||| ||||||||||||| | |||||| || ||||||| ||||||||||||  ||| ||||||     
13590298 acccaagctatgaatcatcaacaataatatctcttaacaacaacaacatcaattaaacatgaatctcatcacaaatcaacaacaacatagcacaattcaa 13590199  T
180 caatt 184  Q
    |||||    
13590198 caatt 13590194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 24 - 202
Target Start/End: Original strand, 9903 - 10082
Alignment:
24 ttttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaa 122  Q
    |||||| ||| ||| |||||||  ||||||||  ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||    
9903 ttttaccaaaacaccaacaacatctcatttctccacaacaaatcatgaatcatgcaaacccaagccatgaataatcatcaacaacatgacatatcaacaa 10002  T
123 caacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatattttcaacata 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
10003 caacatcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattgagcatattttcaacata 10082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 129; Significance: 6e-67; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 23 - 218
Target Start/End: Complemental strand, 253271 - 253075
Alignment:
23 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaa 121  Q
    |||| |||||||||| ||||||||| |||||||   ||| || |||||||||||||||||||||||| ||||||||||||||||||||||| || |||||    
253271 atttcacaaaaccaccaacaacaatccatttctcatcaagaaatcatgaatcatgcaaacccaagccttgaattatcatcaacaacatgacttaacaaaa 253172  T
122 acaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatattttcaacataaaccaacttctcatac 218  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||| |||||||||    
253171 acaacaacaattgatcatgaaacttatcacaattcaacaacaacaaagcatgattcaccaattgagcatattttcaacatataccaatttctcatac 253075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 127; Significance: 1e-65; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 33341825 - 33342015
Alignment:
1 caaacttcttcattatcaacccattttacaaaaccactaacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagccatgaattatcat 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||    
33341825 caaacttcttcattatcaacccattttacaaaaccaccaacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcat 33341924  T
101 caacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcata 191  Q
    |||| | |||||  | ||| ||||||| | |||||||||||||| ||||| |||||| ||||||| |||||||||||||||||||||||||    
33341925 caaccatatgactaaacaacaacaacaaccattgatcatgaaacatatcataattcatcaacaaccatgcataattcaccaattgagcata 33342015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 63 - 200
Target Start/End: Original strand, 14298427 - 14298564
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||    
14298427 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatattaataacaacatcaattgatcatgaaacttatcacaattcgacaac 14298526  T
163 aacaatgcataattcaccaattgagcatattttcaaca 200  Q
    ||||| ||||||||||||||||||||||||||||||||    
14298527 aacaaagcataattcaccaattgagcatattttcaaca 14298564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 63 - 200
Target Start/End: Original strand, 14304054 - 14304191
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||    
14304054 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatattaataacaacatcaattgatcatgaaacttatcacaattcgacaac 14304153  T
163 aacaatgcataattcaccaattgagcatattttcaaca 200  Q
    ||||| ||||||||||||||||||||||||||||||||    
14304154 aacaaagcataattcaccaattgagcatattttcaaca 14304191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 63 - 200
Target Start/End: Original strand, 35123702 - 35123839
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||    
35123702 aatcatgaatcatgcaaacccaaaccatgaattatcatcaacaacatgacatatcaacaacaacatcaattgatcatgaaacttatcacaattcaataac 35123801  T
163 aacaatgcataattcaccaattgagcatattttcaaca 200  Q
    ||||| ||||||||||||||||||||||||||||||||    
35123802 aacaaagcataattcaccaattgagcatattttcaaca 35123839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 7853926 - 7854116
Alignment:
1 caaacttcttcattatcaacccattttacaaaaccactaacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagccatgaattatcat 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||  ||||||||||||| |||||||||||||||||||||||||||||    
7853926 caaacttcttcattatcaacccattttacaaaaccaccaacaacaactcatttctcaacaacaatcatgattcatgcaaacccaagccatgaattatcat 7854025  T
101 caacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcata 191  Q
    |||| | |||||  | ||| ||||||| | |||||||||||||| |||||||||||| ||||||  |||||||||||||||||||| ||||    
7854026 caaccatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaatcatgcataattcaccaattgaacata 7854116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 54685612 - 54685422
Alignment:
1 caaacttcttcattatcaacccattttacaaaaccactaacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagccatgaattatcat 100  Q
    ||||||||||||||||||||||||||||||||||||  |||| ||| ||||||||  ||||||||||||||||||||||| |||||||||||||||||||    
54685612 caaacttcttcattatcaacccattttacaaaaccagcaacagcaactcatttctcaacaacaatcatgaatcatgcaaatccaagccatgaattatcat 54685513  T
101 caacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcata 191  Q
    |||| | |||||  | ||| ||||||| | |||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||    
54685512 caaccatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 54685422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 63 - 200
Target Start/End: Complemental strand, 53898696 - 53898559
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||    
53898696 aatcatgaatcttgcaaacccaagccatgaattatcaccaacaacatgacatatcaacaacaacattaattgatcatgaaacttatcacaatgcaacaac 53898597  T
163 aacaatgcataattcaccaattgagcatattttcaaca 200  Q
    ||||||||||||||||||||||||||||||||||||||    
53898596 aacaatgcataattcaccaattgagcatattttcaaca 53898559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 66 - 200
Target Start/End: Complemental strand, 50112289 - 50112155
Alignment:
66 catgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaac 165  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||  | ||| ||||||||||||||||||||||||||||||||||||| |||||||    
50112289 catgaatcatgcaaactcaagccatgaattatcatcaacaacatgactaaacaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaac 50112190  T
166 aatgcataattcaccaattgagcatattttcaaca 200  Q
    |||||||||||||||||||||||||||||||||||    
50112189 aatgcataattcaccaattgagcatattttcaaca 50112155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 67 - 215
Target Start/End: Complemental strand, 12349781 - 12349628
Alignment:
67 atgaatcatgcaaac-----ccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaa 161  Q
    |||||||||||||||     ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
12349781 atgaatcatgcaaaccatggccaagccatgatttatcatctacaacatgacatatcaacaacaacatcaattgatcatgaaacttatcacaattcaacaa 12349682  T
162 caacaatgcataattcaccaattgagcatattttcaacataaaccaacttctca 215  Q
    |||||| |||||||||||||||||||||||||||||||||| | ||||||||||    
12349681 caacaaagcataattcaccaattgagcatattttcaacatataacaacttctca 12349628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 39 - 218
Target Start/End: Original strand, 14295419 - 14295600
Alignment:
39 aacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatc 137  Q
    |||||||  ||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||  || |||||||||||||||||    
14295419 aacaacatctcatttctcaacaacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatcacttagaaacaacaacatcaattgatc 14295518  T
138 atgaaacttatcacaattcaacaacaacaatgcataattc-accaattgagcatattttcaacataaaccaacttctcatac 218  Q
    ||||| |||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||| ||||  |||||||||    
14295519 atgaatcttatcacaattcaacaacaacatagcataattcaaccaattgagcatattttcaacatataccattttctcatac 14295600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 68 - 215
Target Start/End: Original strand, 8631801 - 8631948
Alignment:
68 tgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaa 167  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||  | ||||||||||||||||| ||||||||||||    
8631801 tgaatcatgcaaacccaagccatgaatgatcatcaacaacatgacatatcaacaacaacatcaatttgttatgaaacttatcacaatccaacaacaacaa 8631900  T
168 tgcataattcaccaattgagcatattttcaacataaaccaacttctca 215  Q
     ||||||||||| || | ||||||||||||||||| ||||||||||||    
8631901 agcataattcactaaataagcatattttcaacatataccaacttctca 8631948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 19946642 - 19946776
Alignment:
1 caaacttcttcattatcaacccattttacaaaaccactaacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagccatgaattatcat 100  Q
    |||||||||  |||||||||||||||||||||||||| |||||||| ||||||||  |||||||||||||||||||||||||||||||||| ||||||||    
19946642 caaacttctatattatcaacccattttacaaaaccaccaacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatggattatcat 19946741  T
101 caacaacatgacatatcaaaaacaacatcaattga 135  Q
    ||||||||||||||||||| |||||||||||||||    
19946742 caacaacatgacatatcaacaacaacatcaattga 19946776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 66 - 200
Target Start/End: Complemental strand, 22144510 - 22144376
Alignment:
66 catgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaac 165  Q
    |||||||||||||||||||||||||| |||||||||||||||||| | || ||| ||||||| ||||||||||||||||||||||||||||| |||||||    
22144510 catgaatcatgcaaacccaagccatgtattatcatcaacaacatggcttaacaacaacaacaacaattgatcatgaaacttatcacaattcatcaacaac 22144411  T
166 aatgcataattcaccaattgagcatattttcaaca 200  Q
    |||||||| ||||||||||||||||||||||||||    
22144410 aatgcatacttcaccaattgagcatattttcaaca 22144376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 67 - 200
Target Start/End: Complemental strand, 6154567 - 6154435
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| || ||| ||||||| ||||||||||||||||||||||||||||| ||| ||||    
6154567 atgaatcatgcaa-cccaagccatgaattatcatcaacaacatgacttaacaataacaacaacaattgatcatgaaacttatcacaattcatcaataaca 6154469  T
167 atgcataattcaccaattgagcatattttcaaca 200  Q
    ||||||||||||||||||||||||||||||||||    
6154468 atgcataattcaccaattgagcatattttcaaca 6154435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 65 - 218
Target Start/End: Original strand, 17938582 - 17938735
Alignment:
65 tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaa 164  Q
    |||||||||||| ||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||| | | |||||| |||||||||    
17938582 tcatgaatcatgtaaacccaagccatgaatgattatcaacaacatgacatatcaacaacaacatcaattgatcatgaaaataaccacaatccaacaacaa 17938681  T
165 caatgcataattcaccaattgagcatattttcaacataaaccaacttctcatac 218  Q
    ||| |||||||||| ||||| ||||||||||||||||| | |||||||||||||    
17938682 caaagcataattcatcaattaagcatattttcaacatatatcaacttctcatac 17938735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 39 - 194
Target Start/End: Complemental strand, 19570953 - 19570798
Alignment:
39 aacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatca 138  Q
    |||||||  ||||||||  ||||||| || |||| |||||||| ||||||||||||||||||||||||||||||  | ||| ||||||| ||||||||||    
19570953 aacaacatctcatttctcaacaacaaccaagaattatgcaaactcaagccatgaattatcatcaacaacatgactaaacaacaacaacaacaattgatca 19570854  T
139 tgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatattt 194  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
19570853 tgaaacttatcacaattcaccaacaacaatgcataattcaccaattgagcatattt 19570798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 63 - 218
Target Start/End: Original strand, 54424018 - 54424173
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||||||||| ||||||||||||||| |||||| ||||| | || || ||| ||||||||||||||||||||||||||||||||||||| ||||    
54424018 aatcatgaatcatgcatacccaagccatgaataatcatccacaacgtcacttagcaataacaacatcaattgatcatgaaacttatcacaattcatcaac 54424117  T
163 aacaatgcataattcaccaattgagcatattttcaacataaaccaacttctcatac 218  Q
    ||||  |||||||||||||||||||||||||||||||||| | ||| |||||||||    
54424118 aacatagcataattcaccaattgagcatattttcaacatatatcaatttctcatac 54424173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 63 - 200
Target Start/End: Complemental strand, 12349970 - 12349834
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| || ||| ||||||| ||||||||||||||||||||||||||||| ||||    
12349970 aatcatgaatcatgcaa-cccaagccatgaattatcatcaacaacatgacttaacaacaacaacaacaattgatcatgaaacttatcacaattcatcaac 12349872  T
163 aacaatgcataattcaccaattgagcatattttcaaca 200  Q
     || ||||||||||||||||||||||||||| ||||||    
12349871 tacgatgcataattcaccaattgagcatattatcaaca 12349834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 19 - 207
Target Start/End: Complemental strand, 17523176 - 17522986
Alignment:
19 acccatttt-acaaaaccactaacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacat-gacatat 116  Q
    ||||||||| || ||| ||| |||||||  ||||||||  |||  |||||| ||||||||||||||||||||||||||||||||||||| || ||| ||     
17523176 acccattttcaccaaaacaccaacaacatctcatttctcaacacaaatcataaatcatgcaaacccaagccatgaattatcatcaacaaaattgacttag 17523077  T
117 caaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatattttcaacataaacca 207  Q
    ||| |||||||||||||| |||||||||||||||||||||| ||| ||||  |||||||||||||||||||||||||||||||||| ||||    
17523076 caacaacaacatcaattggtcatgaaacttatcacaattcatcaataacatagcataattcaccaattgagcatattttcaacatatacca 17522986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 63 - 200
Target Start/End: Complemental strand, 6146986 - 6146850
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||| || ||| |||| || ||||||| ||||||||||||||||||||| ||||    
6146986 aatcatgaatcatg-aaacccaagccatgaattattatcaacaacatgacttaacaacaacagcaacaattgaccatgaaacttatcacaattcatcaac 6146888  T
163 aacaatgcataattcaccaattgagcatattttcaaca 200  Q
    |||||||||| |||||||||||||||||||||||||||    
6146887 aacaatgcatgattcaccaattgagcatattttcaaca 6146850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 63 - 218
Target Start/End: Complemental strand, 11329202 - 11329047
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| || || ||| |||||||||||||||||||||| |||||||||||||||||||    
11329202 aatcatgaatcatgcatacccaagccatgaattatcatcaacaacatcacttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaac 11329103  T
163 aacaatgcataattcaccaa-ttgagcatattttcaacataaaccaacttctcatac 218  Q
    ||||  |||||||||| ||| ||||||||| |||||||||| ||||  |||||||||    
11329102 aacatagcataattcaacaatttgagcata-tttcaacatataccactttctcatac 11329047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 69 - 197
Target Start/End: Complemental strand, 16996294 - 16996166
Alignment:
69 gaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaat 168  Q
    |||| |||||||| ||||||||||||||||||||||||||||||  | ||| ||||||| |||||||||||||||| |||||||||||| ||||||||||    
16996294 gaattatgcaaactcaagccatgaattatcatcaacaacatgactaaacaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaacaat 16996195  T
169 gcataattcaccaattgagcatattttca 197  Q
    |||||||||||||||||||||||||||||    
16996194 gcataattcaccaattgagcatattttca 16996166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 69 - 194
Target Start/End: Original strand, 13817527 - 13817649
Alignment:
69 gaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaat 168  Q
    |||| |||||||||||||||||||||||||||||||||||||||   | || ||||||| ||||||||||||||||||||||||||||| ||||||||||    
13817527 gaattatgcaaacccaagccatgaattatcatcaacaacatgac---taaacaacaacaacaattgatcatgaaacttatcacaattcaccaacaacaat 13817623  T
169 gcataattcaccaattgagcatattt 194  Q
    ||||||||||||||||||||||||||    
13817624 gcataattcaccaattgagcatattt 13817649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 63 - 217
Target Start/End: Original strand, 17139514 - 17139668
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| || || ||| |||||||||||||||||||||| |||||||||||||||||||    
17139514 aatcatgaatcatgcatacccaagccatgaattatcatcaacaacatcacttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaac 17139613  T
163 aacaatgcataattc-accaattgagcatattttcaacataaaccaacttctcata 217  Q
    ||||  |||| |||| |||||||||||||| |||||||||| ||||  ||||||||    
17139614 aacatagcatgattcaaccaattgagcata-tttcaacatataccattttctcata 17139668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 66 - 218
Target Start/End: Original strand, 14301074 - 14301227
Alignment:
66 catgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaac 165  Q
    ||||||||||||||||| ||| ||||||| |||||||||||||| || ||  || |||||||||||||||||||||| ||||||||||||||||||||||    
14301074 catgaatcatgcaaaccaaagacatgaataatcatcaacaacatcacttagaaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaac 14301173  T
166 aatgcataattc-accaattgagcatattttcaacataaaccaacttctcatac 218  Q
    |  ||||||||| ||||||||||||||||||||||||| ||||  |||||||||    
14301174 atagcataattcaaccaattgagcatattttcaacatataccattttctcatac 14301227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 31 - 197
Target Start/End: Complemental strand, 14528286 - 14528118
Alignment:
31 aaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatc 129  Q
    ||||||| |||||||  ||||||||  ||||||| ||||||||||| || ||||||||||||||||| |||||||||||| || || ||| |||||||||    
14528286 aaaccaccaacaacatctcatttctcaacaacaaatcatgaatcattcatacccaagccatgaattaccatcaacaacatcacttagcaacaacaacatc 14528187  T
130 aattgatcatgaaacttatcacaattcaacaacaacaatgcataattc-accaattgagcatattttca 197  Q
    ||||||||||||| |||||||||||||||||||||||  |||| |||| ||||||||||||||||||||    
14528186 aattgatcatgaatcttatcacaattcaacaacaacatagcatgattcaaccaattgagcatattttca 14528118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 10 - 191
Target Start/End: Original strand, 30152893 - 30153076
Alignment:
10 tcattatcaacccatttt-acaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaac 107  Q
    |||| ||||||||||||| || ||| ||| ||||||||| |||||||  ||||||| ||||||||||||||||||||||||||  || |||||||||||     
30152893 tcataatcaacccattttcaccaaaacaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagccatatatcatcatcaacaat 30152992  T
108 atgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcata 191  Q
    |||||  | ||| ||||||| | |||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||    
30152993 atgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 30153076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 67 - 200
Target Start/End: Original strand, 17100663 - 17100796
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||||||| ||||||||||||||||| |||| | ||||| || || ||| || |||||||||||||||||||||||||||||||||| ||||||||    
17100663 atgaatcatgcatacccaagccatgaattaacatccataacatcacttaacaacaataacatcaattgatcatgaaacttatcacaattcatcaacaaca 17100762  T
167 atgcataattcaccaattgagcatattttcaaca 200  Q
      ||||||||||||||||||||||||||||||||    
17100763 tagcataattcaccaattgagcatattttcaaca 17100796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 67 - 200
Target Start/End: Original strand, 17101348 - 17101481
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||||||| ||||||||||||||||| |||| | ||||| || || ||| || |||||||||||||||||||||||||||||||||| ||||||||    
17101348 atgaatcatgcatacccaagccatgaattaacatccataacatcacttaacaacaataacatcaattgatcatgaaacttatcacaattcatcaacaaca 17101447  T
167 atgcataattcaccaattgagcatattttcaaca 200  Q
      ||||||||||||||||||||||||||||||||    
17101448 tagcataattcaccaattgagcatattttcaaca 17101481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 77 - 197
Target Start/End: Complemental strand, 317735 - 317615
Alignment:
77 caaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataatt 176  Q
    ||||| ||||||||||||||||||||||||||||||  | ||| ||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||    
317735 caaactcaagccatgaattatcatcaacaacatgactaaacaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaacaatgcataatt 317636  T
177 caccaattgagcatattttca 197  Q
    |||||||| ||||||||||||    
317635 caccaatttagcatattttca 317615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 48 - 197
Target Start/End: Complemental strand, 16182202 - 16182052
Alignment:
48 tcatttcttgacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaactt 146  Q
    ||||||||  ||||||||| | |||| |||||||||||||||||||||||||||||||||||||||  |  || ||||||| ||||||||||| ||||||    
16182202 tcatttctcaacaacaatccaagaattatgcaaacccaagccatgaattatcatcaacaacatgactaaaaaacaacaacaacaattgatcattaaactt 16182103  T
147 atcacaattcaacaacaacaatgcataattcaccaattgagcatattttca 197  Q
    ||||||||||| |||| |||||||||||||||||||||  |||||||||||    
16182102 atcacaattcatcaacgacaatgcataattcaccaatttggcatattttca 16182052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 23 - 187
Target Start/End: Complemental strand, 17956274 - 17956109
Alignment:
23 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaa 121  Q
    |||| |||||||||| ||||||||| |||||||  ||||||| |||||||||||||||||||||| |||| || ||||||||||| |||||  | ||| |    
17956274 atttcacaaaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagtcatgtatcatcatcaacaatatgactaaacaaca 17956175  T
122 acaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgag 187  Q
    |||||| | |||||||||||||| |||||||||||| ||||||| ||||||||| |||||||||||    
17956174 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataatacaccaattgag 17956109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 67 - 191
Target Start/End: Original strand, 3992560 - 3992684
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||||||| ||||||||||||||||| |||| | ||||| || || ||| ||||||||| ||||||||||||||||||||||||||| |||||||     
3992560 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaacc 3992659  T
167 atgcataattcaccaattgagcata 191  Q
    |||||||||||||||||||||||||    
3992660 atgcataattcaccaattgagcata 3992684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 64 - 194
Target Start/End: Complemental strand, 14059453 - 14059322
Alignment:
64 atcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaaca 163  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||| || |||||||||||| ||||||  |||||||||||||||||||    
14059453 atcatgaattatgcaaacccaagccatgaattatcatcaacaacatcacatagcaacaataacatcaattgaacatgaatattatcacaattcaacaaca 14059354  T
164 acaatgcataattca-ccaattgagcatattt 194  Q
    |||  |||||||||| | ||||||||||||||    
14059353 acatagcataattcatcaaattgagcatattt 14059322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 202
Target Start/End: Complemental strand, 55441123 - 55440950
Alignment:
31 aaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatc 129  Q
    ||||||| |||||||  ||||||||  |||| || |||||||| ||||| ||||||| |||||||||||||||||||||| || || ||  |||||||||    
55441123 aaaccaccaacaacatctcatttctcaacaaaaaatcatgaattatgcatacccaagtcatgaattatcatcaacaacatcacttagcatcaacaacatc 55441024  T
130 aattgatcatgaaacttatcacaattcaacaacaacaatgcataattc-accaattgagcatattttcaacata 202  Q
    |||||||||||||||||||||||||||||| ||||||  | ||||||| |||| ||||||||||||||| ||||    
55441023 aattgatcatgaaacttatcacaattcaaccacaacatagtataattcaaccagttgagcatattttcatcata 55440950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 67 - 191
Target Start/End: Original strand, 2844201 - 2844325
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||||||| ||||||||||||||||| |||| | ||||| || || ||| ||||||||| ||||||||||||||||||||||||||| ||| |||     
2844201 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattgatcatgaaacttatcacaattcatcaagaacc 2844300  T
167 atgcataattcaccaattgagcata 191  Q
    |||||||||||||||||||||||||    
2844301 atgcataattcaccaattgagcata 2844325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 67 - 191
Target Start/End: Original strand, 16261463 - 16261587
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||||||| ||||||||||||||||| |||| | ||||| || || ||| ||||||||| |||||||||||||| |||||||||||| |||||||     
16261463 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattgatcatgaaacatatcacaattcatcaacaacc 16261562  T
167 atgcataattcaccaattgagcata 191  Q
    |||||||||||||||||||||||||    
16261563 atgcataattcaccaattgagcata 16261587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 191
Target Start/End: Original strand, 45581591 - 45581765
Alignment:
19 acccatttt-acaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatat 116  Q
    ||||||||| || ||||||  |||||||||| ||||||  ||||||| | |||||||||||| ||||||||||||||||||||||||| | |||||  |     
45581591 acccattttcaccaaaccaacaacaacaatttatttctcaacaacaaattatgaatcatgcatacccaagccatgaattatcatcaaccatatgactaaa 45581690  T
117 caaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcata 191  Q
    ||| ||||||| | ||| |||||||||| |||||||||||| ||||||  |||||||||||||||||||||||||    
45581691 caacaacaacaaccattaatcatgaaacatatcacaattcatcaacaatcatgcataattcaccaattgagcata 45581765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 63 - 184
Target Start/End: Complemental strand, 12488967 - 12488846
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||| ||| | |||||||||||||||||||||||||||||| || || ||| |||||||||||||||||||||| |||||||||||||||||||    
12488967 aatcatgaattatgaacacccaagccatgaattatcatcaacaacatcacttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaac 12488868  T
163 aacaatgcataattcaccaatt 184  Q
    ||||   ||||||||| |||||    
12488867 aacataacataattcatcaatt 12488846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 36 - 200
Target Start/End: Complemental strand, 19261108 - 19260943
Alignment:
36 actaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattg 134  Q
    ||||||||||| | ||||| | ||||||| | |||||||||||| ||||||||||||||||| |||  | ||||| |  || ||| ||||||||| ||||    
19261108 actaacaacaacttatttcataacaacaaattatgaatcatgcatacccaagccatgaattaacattcataacatcatttaacaacaacaacatctattg 19261009  T
135 atcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatattttcaaca 200  Q
    ||||||||||||||||||||||| |||||||   | ||||||||||||||||||||||||||||||    
19261008 atcatgaaacttatcacaattcatcaacaacttagtataattcaccaattgagcatattttcaaca 19260943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 39 - 191
Target Start/End: Complemental strand, 54038398 - 54038245
Alignment:
39 aacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatc 137  Q
    |||||||||| ||||||| ||||||| | |||||||||||| ||||||||||||||||||||||||| | |||||  | ||| ||||||| | ||| |||    
54038398 aacaacaatttatttcttaacaacaaattatgaatcatgcatacccaagccatgaattatcatcaactatatgactaaacaacaacaacaaccattaatc 54038299  T
138 atgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcata 191  Q
    ||||||| ||||||| |||| ||||||| |||||||||||||||||| ||||||    
54038298 atgaaacatatcacatttcatcaacaaccatgcataattcaccaatttagcata 54038245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 67 - 191
Target Start/End: Original strand, 38167924 - 38168048
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||||||| ||||||||||||||||| |||| | ||||| || || ||| ||||||||| |||||||||||||||||| |||||||| ||||||||    
38167924 atgaatcatgcatacccaagccatgaattaacatccataacatcacttaacaacaacaacatctattgatcatgaaacttattacaattcatcaacaaca 38168023  T
167 atgcataattcaccaattgagcata 191  Q
      |||||||||||||||||||||||    
38168024 tagcataattcaccaattgagcata 38168048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 67 - 191
Target Start/End: Original strand, 53771051 - 53771175
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||||||| ||||||||||||||||| |||  | ||||| || || ||| ||||||||| |||||||||||||| |||||||||||| |||||||     
53771051 atgaatcatgcatacccaagccatgaattagcattcataacatcacttaacaacaacaacatctattgatcatgaaacatatcacaattcatcaacaacc 53771150  T
167 atgcataattcaccaattgagcata 191  Q
    |||||||||||||||||||||||||    
53771151 atgcataattcaccaattgagcata 53771175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 65 - 218
Target Start/End: Original strand, 16880131 - 16880284
Alignment:
65 tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaa 164  Q
    |||||||| ||||| |||||||||||||||||||||| ||||||| || || ||| || |||||||||||| |||||| |||||||||||||||||||||    
16880131 tcatgaattatgcacacccaagccatgaattatcatccacaacatcacttagcaacaataacatcaattgaacatgaatcttatcacaattcaacaacaa 16880230  T
165 caatgcataa-ttcaccaattgagcatattttcaacataaaccaacttctcatac 218  Q
    ||  |||||| ||||| ||||||||||||| | |||||| ||||  |||||||||    
16880231 catagcataatttcacaaattgagcatattct-aacatataccactttctcatac 16880284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 63 - 218
Target Start/End: Complemental strand, 11061247 - 11061091
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||| ||| | ||||||||||||||| |||| |||||| || || || ||  ||||||||||||||| |||||   ||||||||||||||||||    
11061247 aatcatgaattatgaacacccaagccatgaatcatcaacaacaatatcacttagcaccaacaacatcaattgaacatgactattatcacaattcaacaac 11061148  T
163 aacaatgcataattc-accaattgagcatattttcaacataaaccaacttctcatac 218  Q
    ||||  ||||||||| ||||||||||||||||||||||||| ||||  |||||||||    
11061147 aacatagcataattcaaccaattgagcatattttcaacatataccattttctcatac 11061091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 63 - 218
Target Start/End: Complemental strand, 12560477 - 12560322
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||||||||| |||||||||| |||||| |||| ||||||| || || ||| ||||||||| |||||||||||| | |||||||||||||||||    
12560477 aatcatgaatcatgcatacccaagccaggaattaacatccacaacatcacttagcaacaacaacatccattgatcatgaatcatatcacaattcaacaac 12560378  T
163 aacaatgcataattc-accaattgagcatattttcaacataaaccaacttctcatac 218  Q
    ||||  ||||||||| |||| ||| |||||||||| ||||| ||||  |||||||||    
12560377 aacatagcataattcaaccagttgggcatattttc-acatataccactttctcatac 12560322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 67 - 191
Target Start/End: Original strand, 23492383 - 23492507
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||||||| ||||||||||||||||| |||| | ||||| || || ||| ||||||||| |||||||||||||| |||||||||||| |||||||     
23492383 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattgatcatgaaacatatcacaattcatcaacaacc 23492482  T
167 atgcataattcaccaattgagcata 191  Q
    || |||||||||||| |||||||||    
23492483 atccataattcaccatttgagcata 23492507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 47785051 - 47784873
Alignment:
1 caaacttcttcattatcaacccattttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatca 99  Q
    |||||||||||||||||||||||||||||| || ||| |||||||| ||||||||   |||||| |||||||| ||| | ||||||||||||||| || |    
47785051 caaacttcttcattatcaacccattttacagaatcaccaacaacaactcatttctcaccaacaaatcatgaattatgaacacccaagccatgaatcatta 47784952  T
100 tcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattca 178  Q
     ||||||||| || || ||| ||||||||||| ||| ||||   ||||  |||||||||||||||||  ||||||||||    
47784951 acaacaacatcacttaacaacaacaacatcaactgaacatgtttcttactacaattcaacaacaacatagcataattca 47784873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 63 - 202
Target Start/End: Original strand, 3578097 - 3578234
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||||||||| ||| ||||||  | || | |||||||||||||| || ||| ||||| ||||||||||||||||||||||| ||||||||| ||    
3578097 aatcatgaatcatgcatacctaagcca--atttttaatcaacaacatgacttagcaacaacaa-atcaattgatcatgaaacttatcgcaattcaaccac 3578193  T
163 aacaatgcataattc-accaattgagcatattttcaacata 202  Q
    ||||  || |||||| |||| ||||||||||||||||||||    
3578194 aacatagcgtaattcaaccagttgagcatattttcaacata 3578234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 16 - 166
Target Start/End: Complemental strand, 38811297 - 38811146
Alignment:
16 tcaacccattttacaaaaccactaacaacaattcatttcttgacaacaat-catgaatcatgcaaacccaagccatgaattatcatcaacaacatgacat 114  Q
    |||||||||||||||||  ||| |||||||| ||||||||   || |||  ||||||| ||||| ||||||||||||||| |||||||||||||| || |    
38811297 tcaacccattttacaaagtcaccaacaacaactcatttctgatcatcaaaacatgaattatgcacacccaagccatgaatcatcatcaacaacatcactt 38811198  T
115 atcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    | ||| ||||||||||||||| |||||| || | || ||||||||| |||||    
38811197 agcaacaacaacatcaattgaacatgaatctcagcataattcaacatcaaca 38811146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 63 - 165
Target Start/End: Original strand, 15876074 - 15876176
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||| ||| | ||| ||||||||||| ||||| |||||||| || || ||| ||||||||||||||| |||||| |||||||||||||||||||    
15876074 aatcatgaattatgaatacctaagccatgaatcatcattaacaacatcacttaccaacaacaacatcaattgaacatgaatcttatcacaattcaacaac 15876173  T
163 aac 165  Q
    |||    
15876174 aac 15876176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 134 - 200
Target Start/End: Complemental strand, 34439513 - 34439447
Alignment:
134 gatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatattttcaaca 200  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||    
34439513 gatcatgaaacttatcataattcatcaacaacaatgcataattcaccaattgagcatattttaaaca 34439447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 25 - 178
Target Start/End: Original strand, 17204667 - 17204821
Alignment:
25 tttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaac 123  Q
    |||||||||||||||||||||| ||||||||   |||||| |||||||| ||  | ||||||||||||||| |||| |||||| || || || ||| |||    
17204667 tttacaaaaccactaacaacaactcatttctcatcaacaaatcatgaattataaacacccaagccatgaatcatcaacaacaatattacttagcaacaac 17204766  T
124 aacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattca 178  Q
    |||||| ||| | |||||  | ||||||||||||||||||| |  ||||||||||    
17204767 aacatccattaaacatgattcctatcacaattcaacaacaatatagcataattca 17204821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 218
Target Start/End: Original strand, 17191511 - 17191702
Alignment:
25 tttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaac 123  Q
    ||||||||||||| ||||||   ||||||||   |||||| |||||||| ||| | || |||||||||||| |||| ||||||||| || || ||| | |    
17191511 tttacaaaaccaccaacaac---tcatttctcatcaacaaatcatgaattatgaacactcaagccatgaatcatcaacaacaacattacttagcaacagc 17191607  T
124 aacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaa-ttgagcatattttcaacataaaccaacttctcatac 218  Q
    |||||||||| | |||||  |||||||||||||| ||||||||   ||||||||| ||| |||||||||  ||||||||||| ||  |||||||||    
17191608 aacatcaattaaacatgattcttatcacaattcagcaacaacataacataattcatcaatttgagcata-attcaacataaatcactttctcatac 17191702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 184
Target Start/End: Complemental strand, 3576704 - 3576558
Alignment:
39 aacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatc 137  Q
    |||||||| ||||||||   |||||| |||||||| ||| | ||||||||||||||| |||| | |||| || || || ||| ||||||||||||  | |    
3576704 aacaacaactcatttctcatcaacaaatcatgaattatgaacacccaagccatgaatcatcaaccacaatattacttagcaacaacaacatcaatcaaac 3576605  T
138 atgaaacttatcacaattcaacaacaacaatgcataattcaccaatt 184  Q
    ||||  |||||||||||||||||||||||  ||||||| || |||||    
3576604 atgactcttatcacaattcaacaacaacatagcataatccatcaatt 3576558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 166
Target Start/End: Original strand, 12952915 - 12953073
Alignment:
10 tcattatcaacccatttt-acaaaaccactaacaacaattcatttcttgacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaacaac 107  Q
    |||| ||||||||||||| |||||||||  |||||||| ||||||||   || | |||||||| | ||| | ||||||||||||||| |||| ||||||     
12952915 tcataatcaacccatttttacaaaaccaacaacaacaactcatttctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaat 12953014  T
108 atgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    ||  | || ||| ||||||||||||| | ||| || || ||||||||||||||||||||    
12953015 atctcttagcaacaacaacatcaattaaacataaatctcatcacaattcaacaacaaca 12953073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 194
Target Start/End: Original strand, 39656556 - 39656664
Alignment:
87 ccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaa-ttg 185  Q
    |||||||| |||| |||||| || || || ||| ||| ||||||||||| |||||| ||||  |||||||||||||||||  |||||||||| ||| |||    
39656556 ccatgaatcatcaacaacaatatcacttagcaacaaccacatcaattgaacatgaatcttacaacaattcaacaacaacatagcataattcaacaatttg 39656655  T
186 agcatattt 194  Q
    |||||||||    
39656656 agcatattt 39656664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 191
Target Start/End: Original strand, 1990759 - 1990937
Alignment:
15 atcaacccattttacaaaaccactaacaacaattcatttcttgacaac-aatcatgaatcatgca-aacccaagccatgaattatcatcaacaacatgac 112  Q
    ||||||||||||||||||||||| |||||||| ||||||||   || | |||||||| | ||| | || ||||||||||||| |||| |||||| ||  |    
1990759 atcaacccattttacaaaaccaccaacaacaactcatttctcatcatcaaatcatgatttatgaacaaaccaagccatgaatcatcaacaacaatatctc 1990858  T
113 atatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcata 191  Q
     || ||| |||||||||| || | |||||  || |||||| |||||||||||||   || ||||||| | |||||||||    
1990859 ttaacaacaacaacatcatttaaacatgattctcatcacagttcaacaacaacataacacaattcacaatttgagcata 1990937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 104
Target Start/End: Original strand, 28558187 - 28558253
Alignment:
39 aacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaac 104  Q
    |||||||||| ||||||  ||||||| | |||||||||||| |||||||||||||||||||||||||    
28558187 aacaacaatttatttctcaacaacaaattatgaatcatgcatacccaagccatgaattatcatcaac 28558253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 9303412 - 9303343
Alignment:
1 caaacttcttcattatcaacccattttacaaaaccactaacaacaattca-tttcttgacaacaatcatg 69  Q
    ||||||||||| |||||||||| |||||||||||||| |||||||| ||| |||||  ||||||||||||    
9303412 caaacttcttctttatcaacccgttttacaaaaccaccaacaacaactcattttctcaacaacaatcatg 9303343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 9591035 - 9590866
Alignment:
24 ttttacaaaaccactaacaacaattcatttcttgacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaa 122  Q
    |||||||||||||  |||||||| ||||||||   || | |||||||||  ||| | ||||||| ||||||| |||| |||||| || || || ||| ||    
9591035 ttttacaaaaccaacaacaacaactcatttctcatcatcaaatcatgaactatgaacacccaagtcatgaatcatcaacaacaatatcacttaacaacaa 9590936  T
123 caacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattc-accaattgagcata 191  Q
    ||||||||||||| ||||   || |||| || ||||||||||||  ||||||||| || |||||||||||    
9590935 caacatcaattgaacatggttctcatcagaactcaacaacaacatagcataattcaacaaattgagcata 9590866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 34559857 - 34560004
Alignment:
16 tcaacccattttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacat 114  Q
    |||||||||||||||||||||  |||||||| ||| ||||   || ||| | |||| | ||| | || |||||||||||| |||| |||||| || || |    
34559857 tcaacccattttacaaaaccaacaacaacaactcaattctcatcatcaaattatgatttatgaacactcaagccatgaatcatcaacaacaatatcactt 34559956  T
115 atcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    | ||| |||||||||||| || |||||| || |||| |||||||||||    
34559957 agcaacaacaacatcaatcgaacatgaatctcatcataattcaacaac 34560004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 191
Target Start/End: Original strand, 14080515 - 14080644
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||| ||| | ||||||||| | ||| |||| ||||||||| || |  ||| ||||||||||||||| ||||   || |||| |||||||||||    
14080515 aatcatgaattatgaatacccaagccgtaaatcatcaacaacaacattacttcgcaataacaacatcaattgaacatggttctcatcataattcaacaac 14080614  T
163 aacaatgcataattca-ccaattgagcata 191  Q
    || |  ||| |||||| |||||||||||||    
14080615 aatatagcacaattcacccaattgagcata 14080644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 184
Target Start/End: Complemental strand, 14814948 - 14814885
Alignment:
121 aacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaatt 184  Q
    ||||||||||||| | |||||  |||||||||||||||||||||||  ||| |||||| |||||    
14814948 aacaacatcaattaaacatgattcttatcacaattcaacaacaacatagcacaattcaacaatt 14814885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 166
Target Start/End: Complemental strand, 17960602 - 17960451
Alignment:
16 tcaacccattttacaaaaccactaacaacaattcatttcttgacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacat 114  Q
    |||||||||||||||||  ||| |||||||| |||||||    |||| |||||||||| ||||| ||||||| |||||||||| |  |||||||| || |    
17960602 tcaacccattttacaaagtcaccaacaacaactcatttcccatcaacaaatcatgaattatgcacacccaagtcatgaattattaataacaacatcactt 17960503  T
115 atcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    | ||  ||  |||||||||||  ||||| || | || ||||||||| |||||    
17960502 agcagcaaacacatcaattgaatatgaatctcagcataattcaacatcaaca 17960451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 167
Target Start/End: Complemental strand, 51961361 - 51961276
Alignment:
80 acccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaa 167  Q
    |||||| |||||||| |||| |||||||||  |||||||| ||||||||||||| | |||| || | ||||||| |||||||||||||    
51961361 acccaaaccatgaatcatcaacaacaacatctcatatcaacaacaacatcaattaagcatg-aattcatcacaa-tcaacaacaacaa 51961276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 126; Significance: 4e-65; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 63 - 200
Target Start/End: Complemental strand, 20573433 - 20573296
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
20573433 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaacaacaacatcaattgatcatgaaacttatcacaattcaacaac 20573334  T
163 aacaatgcataattcaccaattgagcatattttcaaca 200  Q
    ||||| | ||||||||||||||||||||||||||||||    
20573333 aacaaaggataattcaccaattgagcatattttcaaca 20573296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 39 - 194
Target Start/End: Original strand, 41246639 - 41246795
Alignment:
39 aacaacaattcatttcttgacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatc 137  Q
    ||||||| |||||||||  ||||||| | |||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||    
41246639 aacaacatttcatttctcaacaacaaaccatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttaacaacaacaacatcaattgatc 41246738  T
138 atgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatattt 194  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
41246739 atgaaacttatcacaattcatcaacaacaatgcataattcaccaattaagcatattt 41246795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 63 - 202
Target Start/End: Original strand, 21681008 - 21681148
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||  ||||||||||||||||||||||||| ||||||||||||||||    
21681008 aatcatgaatcatgcatacccaagccatgaattatcatcaacaacatcacataccagtaacaacatcaattgatcatgaaactaatcacaattcaacaac 21681107  T
163 aacaatgcataa-ttcaccaattgagcatattttcaacata 202  Q
    ||||| |||||| || |||||||||||||||||||||||||    
21681108 aacaaagcataatttaaccaattgagcatattttcaacata 21681148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 63 - 218
Target Start/End: Complemental strand, 20648070 - 20647915
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||| || ||| ||| ||||||||||||||||||||||||||||||||| ||||    
20648070 aatcatgaatcatgcaaacccaagccatggattaacatcaacaacatgacctagcaacaacgacatcaattgatcatgaaacttatcacaattcatcaac 20647971  T
163 aacaatgcataattcaccaattgagcatattttcaacataaaccaacttctcatac 218  Q
    ||||  |||||||||||||||| | |||| |||||||||| ||||| |||||||||    
20647970 aacatagcataattcaccaattaaacataatttcaacatataccaatttctcatac 20647915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 63 - 218
Target Start/End: Complemental strand, 20654146 - 20653991
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||| || ||| ||| ||||||||||||||||||||||||||||||||| ||||    
20654146 aatcatgaatcatgcaaacccaagcaatgaattaacatcaacaacatgacctagcaacaacgacatcaattgatcatgaaacttatcacaattcatcaac 20654047  T
163 aacaatgcataattcaccaattgagcatattttcaacataaaccaacttctcatac 218  Q
    |||   |||||||||||||||| ||||||||||||| ||| ||||| |||||||||    
20654046 aacttagcataattcaccaattaagcatattttcaatatataccaatttctcatac 20653991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 31 - 191
Target Start/End: Complemental strand, 41507091 - 41506930
Alignment:
31 aaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatc 129  Q
    ||||||| ||||||||| |||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||  | ||| ||||||| |    
41507091 aaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaatatgactaaacaacaacaacaac 41506992  T
130 aattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcata 191  Q
     |||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||    
41506991 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 41506930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 67 - 200
Target Start/End: Original strand, 20481615 - 20481748
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||| || ||| |||||||||||||||||||| |||||||||||||||| ||||||||    
20481615 atgaatcatgcatacccaagccatgaattaacatcaacaacatgacttaacaacaacaacatcaattgatcatgcaacttatcacaattcatcaacaaca 20481714  T
167 atgcataattcaccaattgagcatattttcaaca 200  Q
    | | ||||||||||||||||||||||| ||||||    
20481715 aagtataattcaccaattgagcatattatcaaca 20481748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 63 - 200
Target Start/End: Original strand, 37611675 - 37611811
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||| |||||| |||||||||||||||||||||||| ||||||| || ||| ||||||| |||||||||||||||||| |||||||||| ||||    
37611675 aatcatgaattatgcaa-cccaagccatgaattatcatcaaccacatgacttaacaacaacaacaacaattgatcatgaaacttttcacaattcatcaac 37611773  T
163 aacaatgcataattcaccaattgagcatattttcaaca 200  Q
    ||||| ||||||||||||||||||||||||||||||||    
37611774 aacaaagcataattcaccaattgagcatattttcaaca 37611811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 69 - 197
Target Start/End: Complemental strand, 22235038 - 22234910
Alignment:
69 gaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaat 168  Q
    |||| |||||||||||| ||||||||||||||||||||||||||  | ||| ||||||| |||||||||||||||| |||||||||||| ||||||||||    
22235038 gaattatgcaaacccaatccatgaattatcatcaacaacatgactaaacaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaacaat 22234939  T
169 gcataattcaccaattgagcatattttca 197  Q
    |||||||||||||||||||||||||||||    
22234938 gcataattcaccaattgagcatattttca 22234910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 39 - 197
Target Start/End: Complemental strand, 19993320 - 19993161
Alignment:
39 aacaacaattcatttcttgacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatc 137  Q
    |||||||  ||||||||  ||||||||| | |||| |||||||||| ||||||||||||||||||||||||||||  | ||| ||||||| ||||||||     
19993320 aacaacatctcatttctcaacaacaatccaagaattatgcaaaccctagccatgaattatcatcaacaacatgactaaacaacaacaacaacaattgatg 19993221  T
138 atgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatattttca 197  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
19993220 atgaaatttatcacaattcatcaacaacaatgcataattcaccaattgagcatattttca 19993161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 218
Target Start/End: Original strand, 38533607 - 38533810
Alignment:
16 tcaacccattttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacat 114  Q
    |||||||||||||||||  | | |||||||  ||||||||   |||||| |||||||| ||||| |||||||||||||||||||||||||||||| || |    
38533607 tcaacccattttacaaagtctccaacaacatctcatttctcatcaacaaatcatgaattatgcacacccaagccatgaattatcatcaacaacatcacct 38533706  T
115 atcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaa-ttgagcatattttcaacataaaccaacttct 213  Q
    | ||| ||||||||||||||| |||||| || ||||||||||||||||||||  ||||||||||  || ||||||||| |||||||||| ||||  ||||    
38533707 agcaacaacaacatcaattgaacatgaatctcatcacaattcaacaacaacatagcataattcaataatttgagcata-tttcaacatataccattttct 38533805  T
214 catac 218  Q
    |||||    
38533806 catac 38533810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 24 - 194
Target Start/End: Complemental strand, 39447046 - 39446875
Alignment:
24 ttttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaa 122  Q
    |||||| |||| || |||||||  ||||||||  ||||||| |||| ||||||||| |||||||||||||||||| ||||||||||| || || ||| ||    
39447046 ttttaccaaactaccaacaacatctcatttctcaacaacaaatcat-aatcatgcatacccaagccatgaattattatcaacaacatcacttagcaacaa 39446948  T
123 caacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattc-accaattgagcatattt 194  Q
    |||||||||||||||||||| |||||||||||||||||||||||  ||||||||| ||||||| |||||||||    
39446947 caacatcaattgatcatgaatcttatcacaattcaacaacaacatagcataattcaaccaatttagcatattt 39446875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 23 - 191
Target Start/End: Complemental strand, 24717152 - 24716983
Alignment:
23 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaa 121  Q
    ||||||||||||||| ||||||||| ||||| |  ||||||| | ||||||||||||||||||||||||| || ||||||||||| |||||  | ||  |    
24717152 attttacaaaaccaccaacaacaatccatttatcaacaacaaattatgaatcatgcaaacccaagccatgtatcatcatcaacaatatgactaaacatca 24717053  T
122 acaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcata 191  Q
    |||||| | ||||| ||||||||  ||||||||||| ||||||| |||||||||||||||||||||||||    
24717052 acaacaaccattgaacatgaaacaaatcacaattcatcaacaaccatgcataattcaccaattgagcata 24716983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 67 - 191
Target Start/End: Original strand, 274453 - 274577
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||| ||||||| ||||||||||||||||| |||| | ||||| || || ||| ||||||||| ||||||||||||||||||||||||||| |||||||     
274453 atgattcatgcatacccaagccatgaattagcatccataacatcacttaacaataacaacatctattgatcatgaaacttatcacaattcatcaacaacc 274552  T
167 atgcataattcaccaattgagcata 191  Q
    |||||||||||||||||||| ||||    
274553 atgcataattcaccaattgaacata 274577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 67 - 191
Target Start/End: Complemental strand, 641396 - 641272
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||| ||||||| ||||||||||||||||| |||| | ||||| || || ||| ||||||||| ||||||||||||||||||||||||||| |||||||     
641396 atgattcatgcatacccaagccatgaattagcatccataacatcacttaacaataacaacatctattgatcatgaaacttatcacaattcatcaacaacc 641297  T
167 atgcataattcaccaattgagcata 191  Q
    |||||||||||||||||||| ||||    
641296 atgcataattcaccaattgaacata 641272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 67 - 191
Target Start/End: Complemental strand, 827202 - 827078
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||| ||||||| ||||||||||||||||| |||| | ||||| || || ||| ||||||||| ||||||||||||||||||||||||||| |||||||     
827202 atgattcatgcatacccaagccatgaattagcatccataacatcacttaacaataacaacatctattgatcatgaaacttatcacaattcatcaacaacc 827103  T
167 atgcataattcaccaattgagcata 191  Q
    |||||||||||||||||||| ||||    
827102 atgcataattcaccaattgaacata 827078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 67 - 191
Target Start/End: Complemental strand, 16039126 - 16039002
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||||||| | ||||||||| ||||| |||| | ||||| || || ||| ||||||||| ||||||||||||||||||||||||||| |||||||     
16039126 atgaatcatgcatatccaagccataaattagcatccataacatcacttaacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaacc 16039027  T
167 atgcataattcaccaattgagcata 191  Q
    ||||||||||||| |||||||||||    
16039026 atgcataattcactaattgagcata 16039002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 63 - 133
Target Start/End: Complemental strand, 20567399 - 20567329
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaatt 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
20567399 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaacaacaacatcaatt 20567329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 63 - 133
Target Start/End: Complemental strand, 20573592 - 20573522
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaatt 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
20573592 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaacaacaacatcaatt 20573522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 16 - 184
Target Start/End: Complemental strand, 22736127 - 22735958
Alignment:
16 tcaacccattttacaaaaccactaacaacaattcatttcttgacaacaat-catgaatcatgcaaacccaagccatgaattatcatcaacaacatgacat 114  Q
    |||||||||||||||||  ||| |||||||| |||||| |   ||||||| ||||||| ||||| ||||||||||||||||| || ||||||||| |  |    
22736127 tcaacccattttacaaagtcaccaacaacaactcatttttcatcaacaattcatgaattatgcacacccaagccatgaattaacaacaacaacatcagtt 22736028  T
115 atcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaatt 184  Q
    | ||| ||||||||||||||| |||||| ||||||||||| |||||||||||  | |||||||| |||||    
22736027 agcaagaacaacatcaattgaacatgaatcttatcacaatccaacaacaacatagtataattcatcaatt 22735958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 67 - 191
Target Start/End: Original strand, 39115285 - 39115409
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||||||| || |||| ||||||||||||||||| | |||||  | ||| ||||||| | |||||||||||||| |||||| ||||| |||||||     
39115285 atgaatcatgcatacacaagtcatgaattatcatcaaccatatgactaaacaacaacaacaaccattgatcatgaaacatatcacgattcatcaacaact 39115384  T
167 atgcataattcaccaattgagcata 191  Q
    |||||||||||||||||||||||||    
39115385 atgcataattcaccaattgagcata 39115409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 23 - 184
Target Start/End: Original strand, 23837163 - 23837325
Alignment:
23 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaa 121  Q
    |||| |||||||||| | |||||| ||||||||   |||||| |||||||| ||| | ||||||||||||||| |||| ||||||||| || || ||| |    
23837163 atttcacaaaaccaccaccaacaactcatttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaacaacaacatcacttagcaaca 23837262  T
122 acaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaatt 184  Q
    |||||||||||||| |||||  |||| ||||||||||||||||||  |||||||||| |||||    
23837263 acaacatcaattgaacatgactcttaccacaattcaacaacaacatagcataattcaacaatt 23837325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 125 - 218
Target Start/End: Complemental strand, 20561810 - 20561717
Alignment:
125 acatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatattttcaacataaaccaacttctcatac 218  Q
    ||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||| | |||| |||||||||| ||||| |||||||||    
20561810 acatcaattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattaaacataatttcaacatataccaatttctcatac 20561717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 20567240 - 20567184
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaa 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
20567240 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaa 20567184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 16 - 166
Target Start/End: Original strand, 5854572 - 5854723
Alignment:
16 tcaacccattttacaaaaccactaacaacaattcatttcttgacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacat 114  Q
    |||||||||||||||||||||  |||||||| ||| ||||   || | |||||||| | ||| | ||||||||||||||| |||| |||||| || || |    
5854572 tcaacccattttacaaaaccaacaacaacaactcaattctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcactt 5854671  T
115 atcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    | ||| ||||||||||||||| |||||| || ||||||||||||||||||||    
5854672 agcaacaacaacatcaattgaacatgaatctcatcacaattcaacaacaaca 5854723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 23 - 184
Target Start/End: Complemental strand, 21198434 - 21198272
Alignment:
23 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaa 121  Q
    ||||||| ||||||| |||||||| ||||||||   | |||| |||||||| ||| | ||||||||||||||| || | || |||||| || || ||| |    
21198434 attttaccaaaccaccaacaacaactcatttctcatccacaaatcatgaattatgaacacccaagccatgaatcattaacagcaacatcacttagcaaca 21198335  T
122 acaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaatt 184  Q
    |||||||||||||| |||||  |||| ||||||||||||||||||   ||||||||| |||||    
21198334 acaacatcaattgaacatgattcttaccacaattcaacaacaacataacataattcaacaatt 21198272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 63 - 139
Target Start/End: Original strand, 25122543 - 25122618
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcat 139  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||  | ||| ||||||||| |||||||||    
25122543 aatcatgaatcatgcaa-cccaagccatgaattatcatcaacaacatgactaaacaacaacaacatctattgatcat 25122618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 166
Target Start/End: Original strand, 26011452 - 26011603
Alignment:
16 tcaacccattttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacat 114  Q
    |||||||||||||||||||||  |||||||| | | ||||   || ||| |||||| | ||| | ||||||||||||||| |||| |||||| || || |    
26011452 tcaacccattttacaaaaccaacaacaacaacttaattctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcactt 26011551  T
115 atcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    | ||| ||||||||||||| | |||||| || ||||||||||||||||||||    
26011552 agcaacaacaacatcaattcaacatgaatctcatcacaattcaacaacaaca 26011603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 166
Target Start/End: Original strand, 15933321 - 15933407
Alignment:
80 acccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    ||||||||||||||| |||| |||||| || || || ||| ||||||||||||||| |||||| || |||| |||||||||||||||    
15933321 acccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatgaatctcatcataattcaacaacaaca 15933407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 218
Target Start/End: Original strand, 22981351 - 22981434
Alignment:
135 atcatgaaacttatcacaattcaacaacaacaatgcataattcaccaa-ttgagcatattttcaacataaaccaacttctcatac 218  Q
    |||||||| |||||||||||||||||||||||  |||||||||| ||| ||||||||| |||||||||| ||||  |||||||||    
22981351 atcatgaatcttatcacaattcaacaacaacatagcataattcaacaatttgagcata-tttcaacatataccactttctcatac 22981434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 191
Target Start/End: Complemental strand, 24385988 - 24385873
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||||||| ||||||||||||||||| |||| | || || || || ||| ||||||||| ||||||||| |         ||||||| ||||||||    
24385988 atgaatcatgcatacccaagccatgaattagcatccataaaatcacttaacaacaacaacatctattgatcatta---------caattcatcaacaaca 24385898  T
167 atgcataattcaccaattgagcata 191  Q
    |||| ||||||||||||||||||||    
24385897 atgcttaattcaccaattgagcata 24385873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 63 - 166
Target Start/End: Complemental strand, 23226317 - 23226214
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||| ||| | ||||||||||||||| |||| |||||| || || || ||| ||||||||||||||| ||||   || |||| |||||||||||    
23226317 aatcatgaattatgaatacccaagccatgaatcatcaacaacaatatcacttaacaacaacaacatcaattgaacatggttctcatcataattcaacaac 23226218  T
163 aaca 166  Q
    ||||    
23226217 aaca 23226214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 159
Target Start/End: Original strand, 15969800 - 15969920
Alignment:
39 aacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatca 138  Q
    |||||||| ||||||||   | |||||||||||| ||||| ||||||||||||||||||||  | |||||| || || ||| ||| ||| ||||||| ||    
15969800 aacaacaactcatttctcctctacaatcatgaattatgcacacccaagccatgaattatcaatagcaacatcacttaacaacaactacaccaattgaaca 15969899  T
139 tgaaacttatcacaattcaac 159  Q
    |||| || | || ||||||||    
15969900 tgaatctcagcataattcaac 15969920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 112
Target Start/End: Original strand, 29759893 - 29759997
Alignment:
10 tcattatcaacccatttt-acaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaac 107  Q
    |||| ||||||||||||  || ||| ||| ||||||||  |||||||  ||||||| ||||||||||||||||||||||||||  || |||||||||||     
29759893 tcataatcaacccatttacaccaaaacaccaacaacaaaccatttctcaacaacaaatcatgaatcatgcaaacccaagccatatatcatcatcaacaat 29759992  T
108 atgac 112  Q
    |||||    
29759993 atgac 29759997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 166
Target Start/End: Original strand, 33528383 - 33528534
Alignment:
15 atcaacccattttacaaaaccactaacaacaattcatttcttgacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgaca 113  Q
    ||||||||||||||||||| ||  ||||||||  |||||||   || | |||||||| | ||| | ||||||||||||||| |||| ||| || ||  |     
33528383 atcaacccattttacaaaatcaacaacaacaacccatttctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaa-aatatctct 33528481  T
114 tatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    || ||| ||||||||||||| | |||||| || ||||||||||||||||||||    
33528482 tagcaacaacaacatcaattaaacatgaatctcatcacaattcaacaacaaca 33528534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 166
Target Start/End: Complemental strand, 27233308 - 27233205
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||| | ||| | ||||||||||||||| |||| |||||| ||  | || ||| ||||||||||||| | |||||  || ||||||||||||||||    
27233308 aatcatgatttatgaacacccaagccatgaatcatcaacaacaatatctcttaacaacaacaacatcaattaaacatgattctcatcacaattcaacaac 27233209  T
163 aaca 166  Q
    ||||    
27233208 aaca 27233205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 29306450 - 29306544
Alignment:
90 tgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaatt 184  Q
    ||||| |||| |||||| || || || ||| ||||||||||||| | |||||| || ||||||||||||||||||||  ||| |||||| |||||    
29306450 tgaatcatcaacaacaatatcacttagcaacaacaacatcaattaaacatgaatctcatcacaattcaacaacaacatagcacaattcaacaatt 29306544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 166
Target Start/End: Complemental strand, 23152072 - 23151971
Alignment:
65 tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaa 164  Q
    |||||||| ||| | ||||||||||||||| |||| |||||| || ||||| ||| |||| |||||||||| || |   || |||| |||||||||||||    
23152072 tcatgaattatgaacacccaagccatgaatcatcaacaacaatatcacatagcaacaacagcatcaattgaacacggttctcatcataattcaacaacaa 23151973  T
165 ca 166  Q
    ||    
23151972 ca 23151971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 184
Target Start/End: Complemental strand, 18261695 - 18261591
Alignment:
80 acccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcac 179  Q
    |||||||| |||||| |||| |||||| ||  | || ||| ||||||||||||| | |||||  || ||||||||||||||||||||  ||| ||||||     
18261695 acccaagctatgaatcatcaacaacaatatctcttaacaacaacaacatcaattaaacatgattctcatcacaattcaacaacaacatagcacaattcaa 18261596  T
180 caatt 184  Q
    |||||    
18261595 caatt 18261591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 184
Target Start/End: Complemental strand, 45559161 - 45559057
Alignment:
80 acccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcac 179  Q
    |||||||| |||||| |||| |||||| ||  | || ||| ||||||||||||| | |||||  || ||||||||||||||||||||  ||| ||||||     
45559161 acccaagctatgaatcatcaacaacaatatcccttaacaacaacaacatcaattaaacatgattctcatcacaattcaacaacaacatagcacaattcaa 45559062  T
180 caatt 184  Q
    |||||    
45559061 caatt 45559057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 191
Target Start/End: Original strand, 23158169 - 23158295
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||| ||| | |||||||||||||   |||||||||||||| || ||  || ||||||| | ||||| ||||   || |||| |||||||||||    
23158169 aatcatgaattatgaacacccaagccatga---atcatcaacaacatcacttaggaacaacaacaactattgaacatggttctcatcataattcaacaac 23158265  T
163 aacaatgcataattc-accaattgagcata 191  Q
    ||||   |||||||| ||||||||||||||    
23158266 aacataacataattcaaccaattgagcata 23158295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 178
Target Start/End: Complemental strand, 33611274 - 33611179
Alignment:
83 caagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattca 178  Q
    |||||||||||| |||| |||||| || || || ||| ||||||||||||| | ||||   || | ||||||||||||||||||  ||||||||||    
33611274 caagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattaaacatggttctcaacacaattcaacaacaacatagcataattca 33611179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 166
Target Start/End: Complemental strand, 38635885 - 38635786
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||| ||||| | ||||||||||||||| |||| |||||| ||  | || ||| ||||||||||||| | |||||  || |||| |||||||||||||||    
38635885 atgattcatgaacacccaagccatgaatcatcaacaacaatatctcttaacaacaacaacatcaattaaacatgattctcatcataattcaacaacaaca 38635786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 135
Target Start/End: Original strand, 2544916 - 2545024
Alignment:
23 attttacaaaaccactaacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaa 122  Q
    |||| |||||||||||||||||| | |||||||  |||||||||||||   ||  | ||||||||||| ||| || | ||||||||||   |||||| ||    
2544916 atttcacaaaaccactaacaacagtccatttctcaacaacaatcatgatatatcaacacccaagccat-aatcataaacaacaacatg---tatcaacaa 2545011  T
123 caacatcaattga 135  Q
    |||||||||||||    
2545012 caacatcaattga 2545024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 184
Target Start/End: Complemental strand, 22497399 - 22497329
Alignment:
114 tatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaatt 184  Q
    |||||| ||||||||||||| | |||||| || ||||||| ||||||||||||  ||| |||||| |||||    
22497399 tatcaacaacaacatcaattaaacatgaatctcatcacaaatcaacaacaacatagcacaattcaacaatt 22497329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 124; Significance: 6e-64; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 11583994 - 11584199
Alignment:
1 caaacttcttcattatcaacccattttacaaaaccactaacaacaattcatttcttgacaacaatcatgaatcatgc-aaacccaagccatgaattatca 99  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||  |||||||||||||||||||| ||||||||||||||||||||||    
11583994 caaacttcttcatcatcaacccattttacaaaaccacgaacaacaactcatttctcaacaacaatcatgaatcatgcaaaacccaagccatgaattatca 11584093  T
100 tcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaatt---caacaacaacaatgcataattcaccaattgagcatattttc 196  Q
    ||||| | |||||  | ||| ||||||| | |||||||||||||| ||||||||||   |||||||||||| ||||||||||||||||||||||||||||    
11584094 tcaaccatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcaacaacaacaacaaagcataattcaccaattgagcatattttc 11584193  T
197 aacata 202  Q
    ||||||    
11584194 aacata 11584199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 10 - 202
Target Start/End: Complemental strand, 1168500 - 1168306
Alignment:
10 tcattatcaacccatttt-acaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaac 107  Q
    |||| ||||||||||||| |  ||| ||| |||||||  ||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||    
1168500 tcataatcaacccattttcatcaaaacaccaacaacatctcatttctcaacaacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaac 1168401  T
108 atgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatattttcaacata 202  Q
    ||||| || ||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
1168400 atgacttagcaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacattgcataattcaccaattgagcatattttcaacata 1168306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 63 - 202
Target Start/End: Complemental strand, 24183370 - 24183234
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||||||||||||||||||||| ||||||||||||||   ||||||||||| |||| |||||||||||||||||||| ||||||||||||||||    
24183370 aatcatgaatcatgcaaacccaagccattaattatcatcaaca---tgacatatcaacaacaccatcaattgatcatgaaactcatcacaattcaacaac 24183274  T
163 aacaatgcataattcaccaattgagcatattttcaacata 202  Q
    ||||| ||||||||||||||||||||||||||||||||||    
24183273 aacaaagcataattcaccaattgagcatattttcaacata 24183234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 39 - 218
Target Start/End: Complemental strand, 11337451 - 11337272
Alignment:
39 aacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatca 138  Q
    |||||||  ||||||||  ||||||||||||||||||| |||| |||||||||||||||||||||| ||||||| || ||| ||||||||||||||||||    
11337451 aacaacatctcatttctcaacaacaatcatgaatcatgtaaactcaagccatgaattatcatcaacgacatgacttagcaacaacaacatcaattgatca 11337352  T
139 tgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatattttcaacataaaccaacttctcatac 218  Q
    ||||||||||||||||||| ||||||||   ||||||||||||| ||||||||||||||||||  ||||  |||||||||    
11337351 tgaaacttatcacaattcatcaacaacataacataattcaccaaatgagcatattttcaacatttaccatattctcatac 11337272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 66 - 200
Target Start/End: Original strand, 21397098 - 21397235
Alignment:
66 catgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaa---caacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||   ||||| ||||||||||||||||||||||||||||| ||||    
21397098 catgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttaacaacaataacaacaacaattgatcatgaaacttatcacaattcatcaac 21397197  T
163 aacaatgcataattcaccaattgagcatattttcaaca 200  Q
    ||||||||||||||||||||||||||||||||||||||    
21397198 aacaatgcataattcaccaattgagcatattttcaaca 21397235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 31 - 191
Target Start/End: Original strand, 2031783 - 2031944
Alignment:
31 aaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatc 129  Q
    ||||||| ||||||||| |||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||  | ||| ||||||| |    
2031783 aaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaatatgactaaacaacaacaacaac 2031882  T
130 aattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcata 191  Q
     |||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||    
2031883 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 2031944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 67 - 200
Target Start/End: Original strand, 20712086 - 20712219
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||| || ||| |||||||||||||||||||| |||||||||||||||| ||||||||    
20712086 atgaatcatgcatacccaagccatgaattaacatcaacaacatgacttaacaacaacaacatcaattgatcatgcaacttatcacaattcatcaacaaca 20712185  T
167 atgcataattcaccaattgagcatattttcaaca 200  Q
    | ||||||||||||||||||||||||| ||||||    
20712186 aagcataattcaccaattgagcatattatcaaca 20712219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 24 - 202
Target Start/End: Original strand, 19405503 - 19405683
Alignment:
24 ttttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaa 122  Q
    |||||| ||| ||| |||||||  ||||||||  ||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||| ||  ||    
19405503 ttttaccaaaacaccaacaacatctcatttctccacaacaaatcatgaatcatgcatacccaagccatgaattatcatcaacaacatcacataccagtaa 19405602  T
123 caacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattc-accaattgagcatattttcaacata 202  Q
    ||| ||||||||||||||||||||||||||||||||||||||| |  |||||||| || ||||||||||||||||||||||    
19405603 caatatcaattgatcatgaaacttatcacaattcaacaacaacgaatcataattcaactaattgagcatattttcaacata 19405683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 66 - 197
Target Start/End: Original strand, 21906729 - 21906857
Alignment:
66 catgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaac 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||   ||||||||||||||||||||||||||||||||||| |||||||    
21906729 catgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttaacaa---caacatcaattgatcatgaaacttatcacaattcatcaacaac 21906825  T
166 aatgcataattcaccaattgagcatattttca 197  Q
    |  |||||||||| ||||||| ||||||||||    
21906826 atagcataattcatcaattgaacatattttca 21906857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 69 - 197
Target Start/End: Original strand, 28261533 - 28261661
Alignment:
69 gaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaat 168  Q
    |||| ||||||||||||||||||||||||||||| |||||||||  | ||| ||||||| ||||||||||| |||| |||||||||| | ||||||||||    
28261533 gaattatgcaaacccaagccatgaattatcatcagcaacatgactaaacaacaacaacaacaattgatcataaaacatatcacaatttatcaacaacaat 28261632  T
169 gcataattcaccaattgagcatattttca 197  Q
    |||||||||||||||||||||||||||||    
28261633 gcataattcaccaattgagcatattttca 28261661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 191
Target Start/End: Original strand, 11342635 - 11342819
Alignment:
10 tcattatcaacccatttt-acaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaac 107  Q
    |||| ||||||||||||| || ||  ||| ||||||||| |||||||  ||||||| ||||||||||||||||||||||||||  || |||||||||||     
11342635 tcataatcaacccattttcaccaagacaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagccatatatcatcatcaacaat 11342734  T
108 atgacatatcaaa-aacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcata 191  Q
    |||||  | |||| ||||||| | |||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||    
11342735 atgactaaacaaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 11342819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 69 - 197
Target Start/End: Original strand, 24475595 - 24475718
Alignment:
69 gaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaat 168  Q
    |||| |||||||||||||||||||||||||||||||||||||||   | || ||||||| |||||||||||||||| ||  |||||||| ||||||||||    
24475595 gaattatgcaaacccaagccatgaattatcatcaacaacatgac---taaacaacaacaacaattgatcatgaaacata--acaattcatcaacaacaat 24475689  T
169 gcataattcaccaattgagcatattttca 197  Q
    |||||||||||||||||||||||||||||    
24475690 gcataattcaccaattgagcatattttca 24475718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 67 - 191
Target Start/End: Original strand, 21650705 - 21650829
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||||||| |||||| |||||||||| |||  | ||||| || || ||| ||||||||| |||||||||||||||||||||||||||||||||||     
21650705 atgaatcatgcatacccaaaccatgaattagcattcataacatcacttaacaacaacaacatctattgatcatgaaacttatcacaattcaacaacaacc 21650804  T
167 atgcataattcaccaattgagcata 191  Q
    |||||||||||||||||||||||||    
21650805 atgcataattcaccaattgagcata 21650829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 69 - 197
Target Start/End: Original strand, 4865274 - 4865403
Alignment:
69 gaatcatgcaaacccaagccatgaa-ttatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaa 167  Q
    |||| |||||||||||||||||||| ||||||||||||||||||   | |||  | |||| |||||||||||||||| |||||||||||| |||| ||||    
4865274 gaattatgcaaacccaagccatgaaattatcatcaacaacatgaataaacaaccataacaacaattgatcatgaaacatatcacaattcatcaaccacaa 4865373  T
168 tgcataattcaccaattgagcatattttca 197  Q
    ||||||||||||||||||||||||||||||    
4865374 tgcataattcaccaattgagcatattttca 4865403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 194
Target Start/End: Original strand, 7728378 - 7728558
Alignment:
16 tcaacccattttacaaaaccactaacaacaattcatttcttgacaacaat-catgaatcatgcaaacccaagccatgaattatcatcaacaacatgacat 114  Q
    |||||||||||| ||||  ||| |||||||  |||| |||   ||||||| ||||||| ||||| |||||||| || |||||||||||||||||| || |    
7728378 tcaacccatttttcaaagtcaccaacaacacctcatctctcaccaacaattcatgaattatgcacacccaagcgataaattatcatcaacaacatcactt 7728477  T
115 atcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaa-ttgagcatattt 194  Q
    | ||| ||||||||||||||| |||||| |||||||||||||||||||||||  |||||||||| ||| ||||||||||||    
7728478 agcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacatagcataattcaacaatttgagcatattt 7728558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 77 - 197
Target Start/End: Complemental strand, 21646966 - 21646846
Alignment:
77 caaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataatt 176  Q
    ||||||||||||||||||||||||||||| ||||||  | ||| |||| || |||||||||||||||| |||||||||||| ||||||| || |||||||    
21646966 caaacccaagccatgaattatcatcaacatcatgactaaacaacaacagcaacaattgatcatgaaacatatcacaattcatcaacaacgatacataatt 21646867  T
177 caccaattgagcatattttca 197  Q
    |||||||||| ||||||||||    
21646866 caccaattgaacatattttca 21646846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 63 - 159
Target Start/End: Original strand, 23466463 - 23466559
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaac 159  Q
    |||||||||||||||| |||||||||||||| ||||||||||| ||| || || ||| |||||||||||||||||||||||||||||||||||||||    
23466463 aatcatgaatcatgcatacccaagccatgaactatcatcaacatcatcacttagcaacaacaacatcaattgatcatgaaacttatcacaattcaac 23466559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 80 - 218
Target Start/End: Original strand, 3673885 - 3674023
Alignment:
80 acccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcac 179  Q
    ||||||||||||||| ||||||||| || |  | || ||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||     
3673885 acccaagccatgaatcatcatcaaccacctcgcttagcaacaacaacatcaattgatcatgaaacttatcacaattcaacaacaacatagcataattcaa 3673984  T
180 caa-ttgagcatattttcaacataaaccaacttctcatac 218  Q
    ||| ||||||||| |||||||||| ||||  |||||||||    
3673985 caatttgagcata-tttcaacatataccactttctcatac 3674023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 63 - 178
Target Start/End: Original strand, 23493925 - 23494040
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||| ||| | ||||||||||||||| |||||||||||||| || || ||| ||||||||||||||| |||||| |||||||||||||||||||    
23493925 aatcatgaattatgaacacccaagccatgaatcatcatcaacaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaac 23494024  T
163 aacaatgcataattca 178  Q
    ||||  ||||||||||    
23494025 aacatagcataattca 23494040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 67 - 191
Target Start/End: Original strand, 21204936 - 21205060
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||||||| |||||||||||||||||  || || ||||| || || ||| |||||||   |||||||||||||| |||||||||||| |||||||     
21204936 atgaatcatgcatacccaagccatgaattagaataaataacatcacttaacaacaacaacaaatattgatcatgaaacatatcacaattcatcaacaacc 21205035  T
167 atgcataattcaccaattgagcata 191  Q
    |||||||||||||||||||||||||    
21205036 atgcataattcaccaattgagcata 21205060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 82 - 184
Target Start/End: Complemental strand, 5451065 - 5450963
Alignment:
82 ccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcacca 181  Q
    |||||||| |||| |||||||||||||| || || ||| |||||||||| |||| ||||||  ||||||||||||||||||||||  |||||||||| ||    
5451065 ccaagccaagaatcatcatcaacaacatcacttagcaacaacaacatcagttgaacatgaattttatcacaattcaacaacaacatagcataattcatca 5450966  T
182 att 184  Q
    |||    
5450965 att 5450963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 63 - 166
Target Start/End: Original strand, 21617022 - 21617125
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||| ||| | ||||||||||||||| | || |||||| || || || ||| ||||||||||||||| |||||| || ||||||||||||||||    
21617022 aatcatgaattatgaacacccaagccatgaatcaacaacaacaatatcacttagcaacaacaacatcaattgaacatgaatctcatcacaattcaacaac 21617121  T
163 aaca 166  Q
    ||||    
21617122 aaca 21617125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 184
Target Start/End: Original strand, 19862215 - 19862336
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||| ||| | ||||||| ||||||| |||| ||| || || || || ||| ||||||||||||||  |||||  |||||||||||||||||||    
19862215 aatcatgaattatgaacacccaagtcatgaatcatcaacaataatatcacttagcaacaacaacatcaattgcacatgattcttatcacaattcaacaac 19862314  T
163 aacaatgcataattcaccaatt 184  Q
    ||||  |||||||||| |||||    
19862315 aacatagcataattcaacaatt 19862336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 109145 - 109010
Alignment:
1 caaacttcttcattatcaacccattttacaaaaccactaacaacaattca-tttcttgacaacaatcatgaatcatgcaaacccaagccatgaattatca 99  Q
    |||||||||||  |||||||||||||||||||||||| |||||||| ||| |||||  |||||||||||||   ||| | ||||||||||| | | || |    
109145 caaacttcttctctatcaacccattttacaaaaccaccaacaacaactcattttctcaacaacaatcatgatatatgaacacccaagccataattcataa 109046  T
100 tcaacaacatgacatatcaaaaacaacatcaattga 135  Q
    ||||||||||  |  | ||| |||||||||||||||    
109045 tcaacaacatatctcagcaacaacaacatcaattga 109010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 16105586 - 16105721
Alignment:
1 caaacttcttcattatcaacccattttacaaaaccactaacaacaattca-tttcttgacaacaatcatgaatcatgcaaacccaagccatgaattatca 99  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||| ||| |||||  |||||||||||||   ||| | ||| ||||||| | | || |    
16105586 caaacttcttctttatcaacccattttacaaaaccaccaacaacaactcattttctcaacaacaatcatgatatatgaacacctaagccataattcataa 16105685  T
100 tcaacaacatgacatatcaaaaacaacatcaattga 135  Q
    ||||||||||  |  | ||| |||||||||||||||    
16105686 tcaacaacatatctcagcaacaacaacatcaattga 16105721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 218
Target Start/End: Original strand, 16595474 - 16595668
Alignment:
24 ttttacaaaaccactaacaacaattcatttcttgacaacaat-catgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaa 122  Q
    |||||| |||| || |||||||  ||||||||   ||||||| ||||||||||||| ||||||| ||||||||||||  |||| ||| |  || ||| |     
16595474 ttttaccaaactaccaacaacatctcatttctcatcaacaattcatgaatcatgcacacccaagtcatgaattatcaataacatcatcatttaacaacat 16595573  T
123 caacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatattttcaacataaaccaacttctcatac 218  Q
    | ||||||||||| |||||| || | || ||||||||| |||||   |||||||||| | ||||||||| |||||||||| ||||  |||||||||    
16595574 ctacatcaattgaacatgaatctcaacataattcaacatcaacataacataattcacaatttgagcata-tttcaacatataccactttctcatac 16595668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 63 - 184
Target Start/End: Original strand, 432469 - 432590
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||| ||| ||| | |||||||||| |||| |||| |||||| || || || ||| ||||||||||||||| |||||| |||| |||||| |||||||    
432469 aatcataaattatgaatacccaagccaggaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatgaatcttaccacaatccaacaac 432568  T
163 aacaatgcataattcaccaatt 184  Q
    ||||  | |||||||| |||||    
432569 aacatagtataattcatcaatt 432590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 87 - 166
Target Start/End: Complemental strand, 21222825 - 21222746
Alignment:
87 ccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||| |||| |||||| || || || ||| |||||||| |||||| |||||| |||||||||||||||||||||||    
21222825 ccatgaatcatcaacaacaatatcacttagcaacaacaacattaattgaacatgaatcttatcacaattcaacaacaaca 21222746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 191
Target Start/End: Complemental strand, 23981806 - 23981628
Alignment:
15 atcaacccatttt-acaaaaccactaacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgaca 113  Q
    ||||||||||| | ||||||||| ||||||||| | |||||    ||  |||||||| | ||| | ||||||||||||||| |||| |||||| || ||     
23981806 atcaacccattctcacaaaaccaataacaacaacttatttcacatcacaaatcatgagttatgaacacccaagccatgaatcatcaacaacaatatcact 23981707  T
114 tatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattc-accaattgagcata 191  Q
    || ||| ||||||||||||||| ||||   || |||| |||||||||||||||   |||||||| |||| |||||||||    
23981706 tagcaacaacaacatcaattgaacatggttctcatcataattcaacaacaacatatcataattcaaccatttgagcata 23981628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 166
Target Start/End: Original strand, 6456630 - 6456733
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||| ||||| | ||||||||||||||| |||| |||| | ||  | || ||| ||||||||||||| | |||||  || ||||||||||||||||    
6456630 aatcatgattcatgaacacccaagccatgaatcatcaacaacgatatctcttaacaacaacaacatcaattaaacatgattctcatcacaattcaacaac 6456729  T
163 aaca 166  Q
    ||||    
6456730 aaca 6456733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 28902255 - 28902310
Alignment:
121 aacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataatt 176  Q
    |||||| |||||||| |||||| |||||||||||||||||||||||  ||||||||    
28902255 aacaacttcaattgaacatgaatcttatcacaattcaacaacaacatagcataatt 28902310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 28938650 - 28938705
Alignment:
121 aacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataatt 176  Q
    |||||| |||||||| |||||| |||||||||||||||||||||||  ||||||||    
28938650 aacaacttcaattgaacatgaatcttatcacaattcaacaacaacatagcataatt 28938705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 189
Target Start/End: Complemental strand, 22054028 - 22053963
Alignment:
124 aacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagca 189  Q
    |||||||||||| |||||| | |||| |||||||||||||||   ||| |||||||||||||||||    
22054028 aacatcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagca 22053963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 186
Target Start/End: Complemental strand, 18531262 - 18531200
Alignment:
124 aacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattga 186  Q
    |||||||||||| |||||| | |||| |||||||||||||||   ||| ||||||||||||||    
18531262 aacatcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattga 18531200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 108
Target Start/End: Complemental strand, 32966436 - 32966343
Alignment:
16 tcaacccattttacaaaaccactaacaacaattcatttcttgacaa-caatcatgaatcatgcaaacccaagccatgaattatcatcaacaaca 108  Q
    |||||||||||||||||  ||| |||||||| ||||||||   ||| |||| |||||| |||||  | |||||||||||||||||  |||||||    
32966436 tcaacccattttacaaagtcaccaacaacaactcatttctcatcaaccaattatgaattatgcacgctcaagccatgaattatcaataacaaca 32966343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 166
Target Start/End: Complemental strand, 16835521 - 16835437
Alignment:
82 ccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||| |||||| |||| |||||||||  | || ||| |||||||| |||| | |||||| || ||||||| ||||||||||||    
16835521 ccaagctatgaatcatcaacaacaacatctcttaacaacaacaacattaattaaacatgaatctcatcacaaatcaacaacaaca 16835437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 123; Significance: 2e-63; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 66 - 200
Target Start/End: Complemental strand, 255052 - 254918
Alignment:
66 catgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaac 165  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
255052 catgaatcatgcaaactcaagccatgaattatcatcaacaacatgacatatcaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaac 254953  T
166 aatgcataattcaccaattgagcatattttcaaca 200  Q
    |||||||||||||||||||||||||||||||||||    
254952 aatgcataattcaccaattgagcatattttcaaca 254918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 66 - 200
Target Start/End: Complemental strand, 261658 - 261524
Alignment:
66 catgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaac 165  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
261658 catgaatcatgcaaactcaagccatgaattatcatcaacaacatgacatatcaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaac 261559  T
166 aatgcataattcaccaattgagcatattttcaaca 200  Q
    |||||||||||||||||||||||||||||||||||    
261558 aatgcataattcaccaattgagcatattttcaaca 261524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 122; Significance: 9e-63; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 63 - 200
Target Start/End: Original strand, 271176 - 271313
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
271176 aatcatgaatcatgcaaacccaagctatgaattatcatcaacaacatgacatatcaacaacaacatcaattgatcatgaaacttatcacaattcaacaac 271275  T
163 aacaatgcataattcaccaattgagcatattttcaaca 200  Q
    |||||  |||||||||||||||||||||||||||||||    
271276 aacaaaacataattcaccaattgagcatattttcaaca 271313  T

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Target: chr2; HSP #2
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 63 - 206
Target Start/End: Complemental strand, 4448374 - 4448231
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
4448374 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaacaacaacatcaattgatcatgaaacttatcataattcaacaac 4448275  T
163 aacaatgcataattcaccaattgagcatattttcaacataaacc 206  Q
    ||||| |||| ||||||||||||| ||||||||||||| |||||    
4448274 aacaaagcatcattcaccaattgaacatattttcaacacaaacc 4448231  T

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Target: chr2; HSP #3
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 23 - 218
Target Start/End: Original strand, 25601989 - 25602185
Alignment:
23 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaa 121  Q
    |||| |||||||||| ||||||||| |||||||  ||||||| |||||||||||||||||| ||||||||| ||||||| |||||||||||||| ||| |    
25601989 atttcacaaaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacctaagccatgatttatcataaacaacatgacatagcaaca 25602088  T
122 acaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatattttcaacataaaccaacttctcatac 218  Q
    |||||||||||||||||||||||||||||||||||| |||| |||  |||||| ||||||||||||||||||||||||||| | ||| |||||||||    
25602089 acaacatcaattgatcatgaaacttatcacaattcatcaaccacatagcataactcaccaattgagcatattttcaacatatatcaatttctcatac 25602185  T

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Target: chr2; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 63 - 218
Target Start/End: Original strand, 28974055 - 28974210
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||| ||||||||| ||||    
28974055 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttagcaacaacaacatcaattgatcatgaaacttaccacaattcatcaac 28974154  T
163 aacaatgcataattcaccaattgagcatattttcaacataaaccaacttctcatac 218  Q
    ||||  ||||||||| |||| ||||||||||||||||||| ||||  |||||||||    
28974155 aacatagcataattcgccaaatgagcatattttcaacatataccattttctcatac 28974210  T

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Target: chr2; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 66 - 197
Target Start/End: Original strand, 32465867 - 32465998
Alignment:
66 catgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaac 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  | ||| ||||||||||||||||||||||||||||||||||||| ||| |||    
32465867 catgaatcatgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaacatcaattgatcatgaaacttatcacaattcatcaagaac 32465966  T
166 aatgcataattcaccaattgagcatattttca 197  Q
    ||||||||||||||||||||||||||||||||    
32465967 aatgcataattcaccaattgagcatattttca 32465998  T

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Target: chr2; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 24 - 194
Target Start/End: Complemental strand, 22580140 - 22579971
Alignment:
24 ttttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaa 122  Q
    |||||| ||| ||| |||||||  ||||||||  ||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||  |     
22580140 ttttaccaaaacaccaacaacatctcatttctccacaacaaatcatgaatcatgcatacccaagccatgaattatcatcaacaacatcacatatcagcag 22580041  T
123 caacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattc-accaattgagcatattt 194  Q
    ||||||||||||||||||||||||||||||||||||||   |||| ||||||||| |||||||||||||||||    
22580040 caacatcaattgatcatgaaacttatcacaattcaaca---acaaagcataattcaaccaattgagcatattt 22579971  T

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Target: chr2; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 39 - 195
Target Start/End: Complemental strand, 23836971 - 23836814
Alignment:
39 aacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatc 137  Q
    |||||||  ||||||||  ||||||| ||| |||| ||||||||||||| ||||||||||||||||||| |||||  | ||| ||||||| |||||||||    
23836971 aacaacatctcatttctcaacaacaaatcaagaattatgcaaacccaagtcatgaattatcatcaacaaaatgactaaacaacaacaacaacaattgatc 23836872  T
138 atgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatatttt 195  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
23836871 atgaaacatatcacaattcatcaacaacaatgcataattcaccaattgagcatatttt 23836814  T

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Target: chr2; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 69 - 197
Target Start/End: Complemental strand, 25876154 - 25876026
Alignment:
69 gaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaat 168  Q
    |||| |||||||||||||||||||||||||||||||||||||||  | ||| ||||||| || ||||||||||| | |||||||||||| ||||||||||    
25876154 gaattatgcaaacccaagccatgaattatcatcaacaacatgactaaacaataacaacaacatttgatcatgaagcatatcacaattcatcaacaacaat 25876055  T
169 gcataattcaccaattgagcatattttca 197  Q
    |||||||||||||||||||||||||||||    
25876054 gcataattcaccaattgagcatattttca 25876026  T

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Target: chr2; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 202
Target Start/End: Complemental strand, 36890972 - 36890787
Alignment:
19 acccatttt-acaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatat 116  Q
    ||||||||| || ||||||  |||||||| | ||||||  ||||||| ||| |||||||||| ||||||||||||||| |||||| ||||||| || ||     
36890972 acccattttcaccaaaccaacaacaacaacttatttctcaacaacaaatcaagaatcatgcatacccaagccatgaataatcatccacaacatcacttag 36890873  T
117 caaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatattttcaacata 202  Q
    ||| ||||||| ||||||||||||||||||||||||||| | ||||||||  |||||||||||||||| |||||||||||||||||    
36890872 caacaacaacaacaattgatcatgaaacttatcacaatttatcaacaacatagcataattcaccaattaagcatattttcaacata 36890787  T

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Target: chr2; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 19433636 - 19433452
Alignment:
1 caaacttcttcattatcaacccattttacaaaaccactaacaacaattcatttcttgacaac-aatcatgaatcatgcaaacccaagccatgaattatca 99  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||   |||| |||||||||| ||| | ||||||||||||||| ||||    
19433636 caaacttcttcattatcaacccattttacaaaaccaccaacaacaactcatttctcatcaacaaatcatgaattatgaacacccaagccatgaatcatca 19433537  T
100 tcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaatt 184  Q
     |||||| ||  | || ||| ||||||||||||||| |||||  ||||  ||||||||| |||||||  |||||||||| |||||    
19433536 acaacaatatctcttagcaacaacaacatcaattgaacatgattcttacaacaattcaataacaacatagcataattcaacaatt 19433452  T

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Target: chr2; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 39 - 218
Target Start/End: Original strand, 27261787 - 27261964
Alignment:
39 aacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatc 137  Q
    |||||||  ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| |||||||||||    
27261787 aacaacatctcatttcttaacaacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttagcaacaacaatatcaattgatc 27261886  T
138 atgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatattttcaacataaaccaacttctcatac 218  Q
    ||||||||||||| | |||    ||    | ||||||||||||||| |||||||||||||||||| ||||| |||||||||    
27261887 atgaaacttatca-atttctcatactttga-gcataattcaccaat-gagcatattttcaacatataccaatttctcatac 27261964  T

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Target: chr2; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 23 - 191
Target Start/End: Original strand, 22274688 - 22274856
Alignment:
23 attttacaaaaccactaacaacaattcatttcttgacaacaat-catgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaa 121  Q
    |||| |||||||||| ||||||||| |||||||  |||||||| |||||||||||||| ||||||||||  || ||||||||||| |||||  | ||  |    
22274688 atttcacaaaaccaccaacaacaatccatttctcaacaacaattcatgaatcatgcaa-cccaagccatctatcatcatcaacaatatgactaaacatca 22274786  T
122 acaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcata 191  Q
    |||||| | ||||||||||||||  ||||||||||| ||||||| |||||||||||||||||||||||||    
22274787 acaacaaccattgatcatgaaacacatcacaattcatcaacaaccatgcataattcaccaattgagcata 22274856  T

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Target: chr2; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 194
Target Start/End: Complemental strand, 24571572 - 24571401
Alignment:
24 ttttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaa 122  Q
    |||||| ||||||| |||||||  ||||||||  ||||||| ||||||||||| || | |||||| |||| |||||||||||||||| || || ||| ||    
24571572 ttttaccaaaccaccaacaacatctcatttctcaacaacaaatcatgaatcatacatagccaagc-atgagttatcatcaacaacatcacttaacaacaa 24571474  T
123 caacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattc-accaattgagcatattt 194  Q
    |||||||||||||||||||| |||| ||||||||||||| ||||  ||||||||| |||||||||||||||||    
24571473 caacatcaattgatcatgaatcttaacacaattcaacaaaaacatagcataattcaaccaattgagcatattt 24571401  T

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Target: chr2; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 23 - 191
Target Start/End: Original strand, 22283921 - 22284089
Alignment:
23 attttacaaaaccactaacaacaattcatttcttgacaacaat-catgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaa 121  Q
    |||| |||||||||| |||||||||||||||||  ||| |||| |||||||||||||| ||||||||||| || ||||||||||| | |||  | ||  |    
22283921 atttcacaaaaccaccaacaacaattcatttctcaacagcaattcatgaatcatgcaa-cccaagccatgtatcatcatcaacaataagactaaacatca 22284019  T
122 acaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcata 191  Q
    | |||| | ||||||||||||||  ||||||||||| ||||||| |||||||||||||||||||||||||    
22284020 aaaacaacgattgatcatgaaacacatcacaattcatcaacaaccatgcataattcaccaattgagcata 22284089  T

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Target: chr2; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 78 - 197
Target Start/End: Original strand, 6879458 - 6879577
Alignment:
78 aaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattc 177  Q
    ||||||||| |||| ||||||||||||||||||||  |  || ||||||| ||||||||||| |||| |||||||||||| ||| |||||||||||||||    
6879458 aaacccaagacatgtattatcatcaacaacatgactaaataacaacaacaacaattgatcattaaacatatcacaattcatcaataacaatgcataattc 6879557  T
178 accaattgagcatattttca 197  Q
    |||||||||| |||||||||    
6879558 accaattgagtatattttca 6879577  T

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Target: chr2; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 16 - 160
Target Start/End: Complemental strand, 3529 - 3385
Alignment:
16 tcaacccattttacaaaaccactaacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacata 115  Q
    |||||||||||||||||  ||| |||||||| ||||||||   | |||||||||||| ||| | ||||||||||||||| |||||||||||||| || ||    
3529 tcaacccattttacaaagtcaccaacaacaactcatttctcatctacaatcatgaattatgaacacccaagccatgaatcatcatcaacaacatcactta 3430  T
116 tcaaaaacaacatcaattgatcatgaaacttatcacaattcaaca 160  Q
     ||| ||||||||||||||| |||||| || | || |||||||||    
3429 gcaacaacaacatcaattgaacatgaacctaagcataattcaaca 3385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 67 - 187
Target Start/End: Complemental strand, 9653141 - 9653021
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||||||| ||||||||||||||||| |||| | ||||| || || ||| | ||||||| |||||||||||||  |||| ||||||| |||||||     
9653141 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacatcaacatctattgatcatgaaaaatatcgcaattcatcaacaacc 9653042  T
167 atgcataattcaccaattgag 187  Q
    |||||||||||||||||||||    
9653041 atgcataattcaccaattgag 9653021  T

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Target: chr2; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 67 - 187
Target Start/End: Complemental strand, 21274293 - 21274174
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    ||||||||||| | |||||||||||||||| |||| | ||||| || || ||| ||||||||| |||||||||||||| ||| |||||||| |||||||     
21274293 atgaatcatgcta-cccaagccatgaattagcatccataacatcacttaacaacaacaacatctattgatcatgaaacatattacaattcatcaacaacc 21274195  T
167 atgcataattcaccaattgag 187  Q
    |||||||||||||||||||||    
21274194 atgcataattcaccaattgag 21274174  T

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Target: chr2; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 63 - 194
Target Start/End: Original strand, 67998 - 68130
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||| ||| | || |||||||||||| | || |||||| || || || ||| ||||||||||||||| |||||| |||| ||||||||||||||    
67998 aatcatgaattatgaacacgcaagccatgaatcaccaacaacaatatcacttagcaacaacaacatcaattgaacatgaatcttaccacaattcaacaac 68097  T
163 aacaatgcataattcaccaa-ttgagcatattt 194  Q
    ||||  |||||||||| ||| ||||||||||||    
68098 aacatagcataattcaacaatttgagcatattt 68130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 43645837 - 43646020
Alignment:
1 caaacttcttcattatcaacccattttacaaaaccactaacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagccatgaattatcat 100  Q
    ||||||| ||||||| ||||||||||||||||||||| | |||||| |||  |     ||  |||||||||| ||| | ||||||| ||||||| |||      
43645837 caaactttttcattaccaacccattttacaaaaccaccaccaacaactcaaatgacatcacaaatcatgaattatgaacacccaagtcatgaatcatcga 43645936  T
101 caacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaatt 184  Q
    ||||||||| || || ||| ||||||||||||||| |||||  |||| |||| |||||||||||||  |||||||||| |||||    
43645937 caacaacatcacttagcaacaacaacatcaattgaacatgattcttaccacagttcaacaacaacatagcataattcaacaatt 43646020  T

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Target: chr2; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 29 - 184
Target Start/End: Original strand, 25305416 - 25305573
Alignment:
29 caaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaaca 127  Q
    |||||| || |||||||| ||||||||   |||||| |||||||| ||| | ||||| ||||||||| |||| ||||||||| || || | | |||||||    
25305416 caaaactaccaacaacaactcatttctcatcaacaaatcatgaattatgaatacccaggccatgaatcatcaacaacaacatcacttagccacaacaaca 25305515  T
128 tcaattgatcatgaaacttatcacaattcaacaa-caacaatgcataattcaccaatt 184  Q
    |||||||| |||||  |||| ||||||||||||| |||||  |||||||||| |||||    
25305516 tcaattgaacatgactcttaccacaattcaacaatcaacatagcataattcaacaatt 25305573  T

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Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 194
Target Start/End: Complemental strand, 31146419 - 31146290
Alignment:
65 tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaa 164  Q
    |||||||| ||||| ||| | ||||||| |||||||||||||||| || || ||| |  |||||||||||| || ||| ||||| ||||||||||||| |    
31146419 tcatgaattatgcacacctaggccatgatttatcatcaacaacatcacttagcaacagtaacatcaattgaacaggaatcttattacaattcaacaac-a 31146321  T
165 caatgcataattcaccaa-ttgagcatattt 194  Q
    ||  |||||||||| ||| ||||||||||||    
31146320 catagcataattcaacaatttgagcatattt 31146290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 166
Target Start/End: Original strand, 24884643 - 24884795
Alignment:
15 atcaacccattttacaaaaccactaacaacaattcatttcttgacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgaca 113  Q
    ||||||||||||||||||||||  |||||||| ||||||||   || | |||||||| | ||| | ||||||| ||||||| |||| |||||| ||        
24884643 atcaacccattttacaaaaccaacaacaacaactcatttctcctcatcaaatcatgatttatgaacacccaagtcatgaatcatcaacaacaatatctat 24884742  T
114 tatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    || ||| ||||||||||||| | |||||| || ||||||||||||||| ||||    
24884743 tagcaacaacaacatcaattaaacatgaatctcatcacaattcaacaataaca 24884795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 189
Target Start/End: Complemental strand, 25265643 - 25265520
Alignment:
65 tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaa 164  Q
    |||||||| ||||| ||||||||||||| | || | ||||||||| |  || ||| ||||||||||||||| ||||   || |||| |||||||||||||    
25265643 tcatgaat-atgcatacccaagccatgattcataaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatcataattcaacaacaa 25265545  T
165 caatgcataattcaccaattgagca 189  Q
    ||  ||| |||||||||||||||||    
25265544 catagcaaaattcaccaattgagca 25265520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 63 - 166
Target Start/End: Complemental strand, 23821846 - 23821743
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||| ||| | ||||| ||||||||| |||| |||||| || || || ||| ||||||||||||||| |||||| || |||| ||||||||||     
23821846 aatcatgaattatgaacacccatgccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatgaatctcatcataattcaacaat 23821747  T
163 aaca 166  Q
    ||||    
23821746 aaca 23821743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 63 - 166
Target Start/End: Complemental strand, 23830925 - 23830822
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||| ||| | ||||| ||||||||| |||| |||||| || || || ||| ||||||||||||||| |||||| || |||| ||||||||||     
23830925 aatcatgaattatgaacacccatgccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatgaatctcatcataattcaacaat 23830826  T
163 aaca 166  Q
    ||||    
23830825 aaca 23830822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 63 - 166
Target Start/End: Complemental strand, 24294764 - 24294661
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||| ||| | || |||||||||||| |||||||||| ||| || || ||| ||||||||||||||| |||||| || | || ||||||||| |    
24294764 aatcatgaattatgaatactcaagccatgaatcatcatcaacatcatcacttagcaacaacaacatcaattgaacatgaatctcagcataattcaacatc 24294665  T
163 aaca 166  Q
    ||||    
24294664 aaca 24294661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 24827031 - 24826961
Alignment:
1 caaacttcttcattatcaacccattttacaaaaccactaacaacaattca-tttcttgacaacaatcatga 70  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||  ||| |||||  |||||||||||||    
24827031 caaacttcttctttatcaacccattttacaaaaccaccaacaacagctcattttctcaacaacaatcatga 24826961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 25212990 - 25213126
Alignment:
1 caaacttcttcattatcaacccattttacaaaaccactaacaacaattca--tttcttgacaacaatcatgaatcatgcaaacccaagccatgaattatc 98  Q
    |||| |||||| ||||||||||||||||||||||||| | |||||| |||  |||||  |||||||||||||   ||| | ||||||||||| | | ||     
25212990 caaatttcttctttatcaacccattttacaaaaccaccaccaacaactcatttttctcaacaacaatcatgatatatgaacacccaagccataattcatt 25213089  T
99 atcaacaacatgacatatcaaaaacaacatcaattga 135  Q
    |||||||||||  |  | ||| |||||||||||||||    
25213090 atcaacaacatatctcagcaacaacaacatcaattga 25213126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 191
Target Start/End: Original strand, 19666495 - 19666663
Alignment:
25 tttacaaaaccactaacaacaattcatttcttgacaacaat-catgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaac 123  Q
    ||||||||||||  ||||||||| |||||||   || |||  ||||||| ||| | ||||||||||||||| |||| | |||| || || || ||| |||    
19666495 tttacaaaaccaacaacaacaatccatttctcatcatcaaaacatgaattatgaatacccaagccatgaatcatcaacgacaatatcacttagcaacaac 19666594  T
124 aacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattc-accaattgagcata 191  Q
    |||||||||||| ||||   || |||| ||||||| |||||||  ||||||||| |||| |||||||||    
19666595 aacatcaattgaacatggttctcatcataattcaataacaacatagcataattcaaccatttgagcata 19666663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 166
Target Start/End: Original strand, 722401 - 722504
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||| ||||| ||||||||||||||||||||  |||||||| || || ||  ||| || |||||||| |||||| || | || ||||||||| |    
722401 aatcatgaattatgcacacccaagccatgaattatcaataacaacatcacttagcagcaactacttcaattgaacatgaatctcagcataattcaacatc 722500  T
163 aaca 166  Q
    ||||    
722501 aaca 722504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 65 - 190
Target Start/End: Complemental strand, 19669348 - 19669222
Alignment:
65 tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaa 164  Q
    |||||||| ||| | ||||||||||||||| |||| ||| ||||| || || ||| ||||||||||||||| ||||   |  |||| |||||||||||||    
19669348 tcatgaattatgaatacccaagccatgaatcatcaacaataacatcacttagcaacaacaacatcaattgaacatggttcacatcataattcaacaacaa 19669249  T
165 caatgcataattc-accaattgagcat 190  Q
    ||   |||||||| ||||||| |||||    
19669248 catatcataattcaaccaattaagcat 19669222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 22775393 - 22775331
Alignment:
116 tcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattca 178  Q
    |||| |||||| |||||||| |||||| |||||||||||||||| ||||||  ||||||||||    
22775393 tcaacaacaacttcaattgaacatgaatcttatcacaattcaactacaacatagcataattca 22775331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 22780771 - 22780709
Alignment:
116 tcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattca 178  Q
    |||| |||||| |||||||| |||||| |||||||||||||||| ||||||  ||||||||||    
22780771 tcaacaacaacttcaattgaacatgaatcttatcacaattcaactacaacatagcataattca 22780709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 189
Target Start/End: Complemental strand, 24341584 - 24341519
Alignment:
124 aacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagca 189  Q
    |||||||||||| |||||| | |||| |||||||||||||||   ||| |||||||||||||||||    
24341584 aacatcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagca 24341519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 166
Target Start/End: Complemental strand, 24560955 - 24560869
Alignment:
80 acccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||| |||||| |||| |||||| ||  |||| ||| ||||||||||||| | |||||| || | |||| |||||||||||||    
24560955 acccaagctatgaatcatcaacaacaatatctcataacaacaacaacatcaattaaacatgaatctcaccacatttcaacaacaaca 24560869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 184
Target Start/End: Original strand, 9636768 - 9636872
Alignment:
80 acccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcac 179  Q
    |||||| | |||||| |||| |||||| ||  | || ||| ||||||||||||| | |||||  || ||||||||||||||||||||  ||| ||||||     
9636768 acccaaactatgaatcatcaacaacaatatctcttaacaacaacaacatcaattaaacatgattctcatcacaattcaacaacaacatagcacaattcaa 9636867  T
180 caatt 184  Q
    |||||    
9636868 caatt 9636872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 189
Target Start/End: Complemental strand, 36982694 - 36982571
Alignment:
65 tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaa 164  Q
    |||||||| ||||| |||||| | |||| | |||| ||||||||| |  || ||| || |||||||||||| || ||| | || | ||||||||||||||    
36982694 tcatgaat-atgcatacccaaacaatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacaggaatcataactcaattcaacaacaa 36982596  T
165 caatgcataattcaccaattgagca 189  Q
    |   ||| |||||||||||||||||    
36982595 cttggcaaaattcaccaattgagca 36982571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 121; Significance: 4e-62; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 31 - 218
Target Start/End: Complemental strand, 118237 - 118049
Alignment:
31 aaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatc 129  Q
    ||||||| |||||||  ||||||||  ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| || ||| |||||||||    
118237 aaaccaccaacaacatctcatttctcaacaacaaatcatgaatcatgcaaccccaagccatgaattatcatcaacaacatgacttagcaacaacaacatc 118138  T
130 aattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatattttcaacataaaccaacttctcatac 218  Q
    || ||||||||||||||||||||||||| ||||||||  |||||||||||||||||| ||||||||||||||| |||||||||||||||    
118137 aactgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgaacatattttcaacatataccaacttctcatac 118049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 31 - 218
Target Start/End: Complemental strand, 109736 - 109548
Alignment:
31 aaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatc 129  Q
    ||||||| |||||||  ||||||||  ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| || ||| |||||||||    
109736 aaaccaccaacaacatctcatttctcaacaacaaatcatgaatcatgcaatcccaagccatgaattatcatcaacaacatgacttagcaacaacaacatc 109637  T
130 aattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatattttcaacataaaccaacttctcatac 218  Q
    |||||||||||||||||||||||||||| |||||||   |||||||||||||||| | ||||||||||| ||| ||||| |||||||||    
109636 aattgatcatgaaacttatcacaattcatcaacaacttagcataattcaccaatttatcatattttcaatatataccaatttctcatac 109548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 120; Significance: 1e-61; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 39 - 218
Target Start/End: Original strand, 21718210 - 21718389
Alignment:
39 aacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatca 138  Q
    |||||||  ||||||||  | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
21718210 aacaacatctcatttctcaagaacaaccatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaacaacaacatcaattgatca 21718309  T
139 tgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatattttcaacataaaccaacttctcatac 218  Q
    ||||||||||||||| ||| ||||||||  ||||||||||||||||||||||||||| |||| | ||||| |||||||||    
21718310 tgaaacttatcacaaatcatcaacaacatagcataattcaccaattgagcatattttgaacacataccaatttctcatac 21718389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 63 - 191
Target Start/End: Complemental strand, 35522560 - 35522432
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
35522560 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacgtatcaacaacaacatcaattgatcatgaaacttatcacaattcaacaac 35522461  T
163 aacaatgcataattcaccaattgagcata 191  Q
    ||||| |||||||||||||||||||||||    
35522460 aacaaagcataattcaccaattgagcata 35522432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 58 - 200
Target Start/End: Original strand, 49967651 - 49967793
Alignment:
58 acaacaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattca 157  Q
    ||||||| ||||||||||||||||| |||| |||||||||||||||||||||||| || ||| |||||||||||||||||||||||| ||||||||||||    
49967651 acaacaaccatgaatcatgcaaaccgaagcaatgaattatcatcaacaacatgacttaacaacaacaacatcaattgatcatgaaacgtatcacaattca 49967750  T
158 acaacaacaatgcataattcaccaattgagcatattttcaaca 200  Q
     ||||||||||| ||||||||||||||||||||||||||||||    
49967751 tcaacaacaatgtataattcaccaattgagcatattttcaaca 49967793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 63 - 200
Target Start/End: Complemental strand, 22403350 - 22403214
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| || ||| ||||||| || || ||||||||||||||||||||||| ||||    
22403350 aatcatgaatcatg-aaacccaagccatgaattatcatcaacaacatgacttaacaacaacaacaacagttaatcatgaaacttatcacaattcatcaac 22403252  T
163 aacaatgcataattcaccaattgagcatattttcaaca 200  Q
    ||||||||||||||||||||||||||||||||||||||    
22403251 aacaatgcataattcaccaattgagcatattttcaaca 22403214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 63 - 166
Target Start/End: Complemental strand, 9784341 - 9784238
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
9784341 aatcatgaatcatgcaagcccaagccatgaatgatcatcaacaacatgacatatcaacaacaacatcaattgatcttgaaacttatcacaattcaacaac 9784242  T
163 aaca 166  Q
    ||||    
9784241 aaca 9784238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 24 - 218
Target Start/End: Complemental strand, 51627945 - 51627750
Alignment:
24 ttttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaa 122  Q
    |||||| ||||||| |||||||  ||||||||  ||| ||| |||||||||||||| |||||||||||||||||||||||||| ||| || || ||| ||    
51627945 ttttaccaaaccaccaacaacatctcatttctcaacagcaaatcatgaatcatgcatacccaagccatgaattatcatcaacatcatcacttagcaacaa 51627846  T
123 caacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattc-accaattgagcatattttcaacataaaccaacttctcatac 218  Q
    |||||||||||||||||||| |||||||||||||||||||| ||   |||||||| ||||||||| |||| |||||||||| ||||  |||||||||    
51627845 caacatcaattgatcatgaatcttatcacaattcaacaacaccatatcataattcaaccaattgaacata-tttcaacatataccattttctcatac 51627750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 55 - 197
Target Start/End: Complemental strand, 27330005 - 27329862
Alignment:
55 ttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaa 153  Q
    |||||||||| | |||||||||||| ||||||||||||||||| |||| | ||||| || || ||| ||||||||| |||||||||||||||||||||||    
27330005 ttgacaacaaattatgaatcatgcatacccaagccatgaattaacatccataacatcacttaacaacaacaacatccattgatcatgaaacttatcacaa 27329906  T
154 ttcaacaacaacaatgcataattcaccaattgagcatattttca 197  Q
    || ||||||||||  |||||||||||||||||||||||||||||    
27329905 tttaacaacaacatagcataattcaccaattgagcatattttca 27329862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 191
Target Start/End: Complemental strand, 15861728 - 15861547
Alignment:
10 tcattatcaacccatttt-acaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaac 107  Q
    |||| ||||||||||||| || ||| ||| ||||||||| |||||||  ||||||| |||||||||||||||||||||| |||| || |||||||||||     
15861728 tcataatcaacccattttcaccaaaacaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagtcatgcatcatcatcaacaat 15861629  T
108 atgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcata 191  Q
    |||||  |  | |||||||| | |||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||    
15861628 atgactaa--acaaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 15861547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 191
Target Start/End: Original strand, 22366970 - 22367152
Alignment:
10 tcattatcaacccatttt-acaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaac 107  Q
    |||| ||||||||||||| || ||| ||| ||||||||| |||||||  ||||||| |||||||||||||||||||||| |||| || |||||||||||     
22366970 tcataatcaacccattttcaccaaaacaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagtcatgtatcatcatcaacaat 22367069  T
108 atgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcata 191  Q
    |||||  | ||| ||||||| | |||||||||||||| |||||||||||| ||||||| |||||| ||||||||||||||||||    
22367070 atgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcat-attcaccaattgagcata 22367152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 69 - 195
Target Start/End: Original strand, 41212081 - 41212210
Alignment:
69 gaatcatgcaaacccaagccatgaattatcatcaacaacatgac---atatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaac 165  Q
    |||| |||||||||||||||||||||||||||||||||||||||   | | ||| ||||||| |||||||||||||||| |||||||||||| |||||||    
41212081 gaattatgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaac 41212180  T
166 aatgcataattcaccaattgagcatatttt 195  Q
    | |||||||||||| |||||||||||||||    
41212181 agtgcataattcactaattgagcatatttt 41212210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 39 - 191
Target Start/End: Original strand, 21859992 - 21860145
Alignment:
39 aacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatc 137  Q
    |||||||||||||||||  ||||||| | ||||||||||||||||| ||||||| || ||||||||||| |||||  | ||| ||||||| | ||| |||    
21859992 aacaacaattcatttctcaacaacaaattatgaatcatgcaaacccgagccatgtatcatcatcaacaatatgactaaacaacaacaacaaccattaatc 21860091  T
138 atgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcata 191  Q
    ||||||| |||||||||||| ||||||| |||||||||||||||||||||||||    
21860092 atgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 21860145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 67 - 200
Target Start/End: Original strand, 35054766 - 35054899
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||||||| ||||||||||||||||| |||| | ||||| || || ||| ||||||||| |||||||||||||||||||||| |||| |||| |||    
35054766 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatccattgatcatgaaacttatcacagttcatcaactaca 35054865  T
167 atgcataattcaccaattgagcatattttcaaca 200  Q
      ||||||||||||||||||||||||||||||||    
35054866 tagcataattcaccaattgagcatattttcaaca 35054899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 116 - 218
Target Start/End: Complemental strand, 9784249 - 9784150
Alignment:
116 tcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatattttcaacataaaccaacttctca 215  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||| ||||||||||||||||| ||||||||||||    
9784249 tcaacaacaacatcaattgatcatgaaacttatcacaattcaacaacaaa---gcataattcaccaattaagcatattttcaacatataccaacttctca 9784153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 28 - 191
Target Start/End: Complemental strand, 44035255 - 44035092
Alignment:
28 acaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaac 126  Q
    |||||||||| ||||||||| |||||||  ||||||| | ||||||||||||||| |||||||| | | ||||||||| | |||||  | ||| ||||||    
44035255 acaaaaccaccaacaacaatccatttctcaacaacaaattatgaatcatgcaaactcaagccatta-tcatcatcaactatatgactaaacaacaacaac 44035157  T
127 atcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcata 191  Q
    | | |||||||||||||| |||||||||||| ||||||| |||||||||||||||| ||||||||    
44035156 aaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaaatgagcata 44035092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 23 - 184
Target Start/End: Original strand, 20177140 - 20177302
Alignment:
23 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaa 121  Q
    |||| |||||||||| |||||||| ||||||||   |||||| |||||||| ||| | | ||||||||||||| |||||||||||||| || || ||| |    
20177140 atttcacaaaaccaccaacaacaactcatttctcttcaacaaatcatgaattatgaatatccaagccatgaatcatcatcaacaacatcacttagcaaca 20177239  T
122 acaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaatt 184  Q
    |||||||||||||| | |||   ||| ||||||||||||||||||  |||||||||| |||||    
20177240 acaacatcaattgaacttgacttttaccacaattcaacaacaacatagcataattcaacaatt 20177302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 16 - 159
Target Start/End: Original strand, 27674755 - 27674898
Alignment:
16 tcaacccattttacaaaaccactaacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacata 115  Q
    |||||||||||||||||  ||| |||||||| ||||||||   ||| |||||||||| ||||| ||||||||||||||||||||  |||||||| || ||    
27674755 tcaacccattttacaaagtcaccaacaacaactcatttctcatcaaaaatcatgaattatgcacacccaagccatgaattatcaataacaacatcactta 27674854  T
116 tcaaaaacaacatcaattgatcatgaaacttatcacaattcaac 159  Q
     ||| ||| ||| ||||||| |||||| || | || ||||||||    
27674855 acaacaactacaccaattgaacatgaatctcagcataattcaac 27674898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 23 - 166
Target Start/End: Complemental strand, 13377122 - 13376978
Alignment:
23 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaa 121  Q
    |||| |||||||| | |||||||||||||||||   |||||| |||||||| ||| | || |||||||||||| | |||||||||||| || || ||| |    
13377122 atttcacaaaaccgccaacaacaattcatttctcatcaacaaatcatgaattatgaatactcaagccatgaatcaacatcaacaacatcacttagcaaca 13377023  T
122 acaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||||||||| |||||   | | || |||||||||||||||    
13377022 acaacatcaattgagcatgactttcaccataattcaacaacaaca 13376978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 63 - 178
Target Start/End: Complemental strand, 37234101 - 37233986
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||| | ||| | ||||||| ||||||| |||| |||||| || || || ||| ||||||||||||||| |||||| || ||||||||||||| ||    
37234101 aatcatgatttatggacacccaagtcatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatgaatctcatcacaattcaaccac 37234002  T
163 aacaatgcataattca 178  Q
    ||||  ||||||||||    
37234001 aacatagcataattca 37233986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 63 - 191
Target Start/End: Complemental strand, 22143602 - 22143473
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||| ||| | ||||||||||||||| |||| |||||| || || || ||  ||||||||||||||| ||||   || |||| |||||||||||    
22143602 aatcatgaattatgaatacccaagccatgaatcatcaacaacaatatcacttagcagcaacaacatcaattgagcatggttctcatcataattcaacaac 22143503  T
163 aacaatgcataattc-accaattgagcata 191  Q
    ||||  ||||||||| |||| |||||||||    
22143502 aacatagcataattcaaccatttgagcata 22143473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 16645976 - 16646031
Alignment:
121 aacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataatt 176  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||  ||||||||    
16645976 aacaacatcaattgaacatgaatcttatcacaattcaacaacaacatagcataatt 16646031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 63 - 166
Target Start/End: Original strand, 17608934 - 17609037
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||| | ||| | ||||||||||||||| |||| |||||| || || || ||| ||||||| ||||||| |||||| || |||| |||||||||||    
17608934 aatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcacttaacaacaacaacaacaattgaacatgaatctcatcataattcaacaac 17609033  T
163 aaca 166  Q
    ||||    
17609034 aaca 17609037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 22829712 - 22829629
Alignment:
17 caacccattttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatca 99  Q
    ||||||||||||||||  ||| |||||||| ||||||||   |||||| |||||||| ||||| ||||||||||||||||||||    
22829712 caacccattttacaaagtcaccaacaacaactcatttctcatcaacaaatcatgaattatgcacacccaagccatgaattatca 22829629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 160
Target Start/End: Complemental strand, 38033962 - 38033818
Alignment:
16 tcaacccattttacaaaaccactaacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacata 115  Q
    |||||||||||||||||  ||| |||||||| | ||||||   |||||||| ||||  ||||| ||||||||||||||||| || || |||||| || ||    
38033962 tcaacccattttacaaagtcaccaacaacaacttatttctcatcaacaatcgtgaactatgcacacccaagccatgaattaacaacagcaacatcactta 38033863  T
116 tcaaaaacaacatcaattgatcatgaaacttatcacaattcaaca 160  Q
     ||  ||  ||||||||||| |||||| || | || |||||||||    
38033862 gcagcaatcacatcaattgaacatgaatctcaacataattcaaca 38033818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 16656702 - 16656757
Alignment:
121 aacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataatt 176  Q
    |||||| |||||||| |||||| |||||||||||||||||||||||  ||||||||    
16656702 aacaacttcaattgaacatgaatcttatcacaattcaacaacaacatagcataatt 16656757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 142
Target Start/End: Original strand, 19603055 - 19603182
Alignment:
16 tcaacccattttacaaaaccactaacaacaattcatttcttgacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacat 114  Q
    |||||||||||||||||  ||| |||||||| ||||||||   |||| |||||||||| || || ||||||| ||||||||||||  ||| |||| || |    
19603055 tcaacccattttacaaagtcaccaacaacaactcatttctcatcaacaaatcatgaattattcacacccaagtcatgaattatcaataaccacatcactt 19603154  T
115 atcaaaaacaacatcaattgatcatgaa 142  Q
    | ||  ||| ||||||||||| ||||||    
19603155 agcagcaactacatcaattgaacatgaa 19603182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 142
Target Start/End: Complemental strand, 36356534 - 36356455
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaa 142  Q
    |||||||||| ||| | ||||||||||| ||| |||||||||||||| || ||  || ||||||||||||||| ||||||    
36356534 aatcatgaattatgaacacccaagccataaatcatcatcaacaacatcacttagaaacaacaacatcaattgaacatgaa 36356455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 189
Target Start/End: Original strand, 20445747 - 20445812
Alignment:
124 aacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagca 189  Q
    ||||||||||||||| ||| | || |||||||||||||||||   ||| |||||||||||||||||    
20445747 aacatcaattgatcaagaatcataacacaattcaacaacaacttagcaaaattcaccaattgagca 20445812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 189
Target Start/End: Original strand, 20531512 - 20531577
Alignment:
124 aacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagca 189  Q
    ||||||||||||||| ||| | || |||||||||||||||||   ||| |||||||||||||||||    
20531512 aacatcaattgatcaagaatcataacacaattcaacaacaacttagcaaaattcaccaattgagca 20531577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 141
Target Start/End: Complemental strand, 41229221 - 41229102
Alignment:
23 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaa 121  Q
    ||||||| |||| || |||||||| ||||||||   | |||| |||||||| ||| | || |||||||||||| || | ||||||||| || || ||| |    
41229221 attttaccaaactaccaacaacaactcatttctcatccacaaatcatgaattatgaacactcaagccatgaatcattaacaacaacatcacttagcaaca 41229122  T
122 acaacatcaattgatcatga 141  Q
    |||||||||||||| |||||    
41229121 acaacatcaattgaacatga 41229102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 166
Target Start/End: Complemental strand, 8538134 - 8538048
Alignment:
80 acccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    ||||||||||||||| |||| |||||| ||  | || ||| ||||||||||||| | |||||  || |||| |||||||||||||||    
8538134 acccaagccatgaatcatcaacaacaatattccttaacaacaacaacatcaattaaacatgattctcatcataattcaacaacaaca 8538048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 166
Target Start/End: Complemental strand, 8603373 - 8603287
Alignment:
80 acccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    ||||||||||||||| |||| |||||| ||  | || ||| ||||||||||||| | |||||  || |||| |||||||||||||||    
8603373 acccaagccatgaatcatcaacaacaatattccttaacaacaacaacatcaattaaacatgattctcatcataattcaacaacaaca 8603287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 165
Target Start/End: Original strand, 21195020 - 21195122
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||| | ||| | ||||||||||||||| |||| |||||| ||  | || ||| |||||||| |||| | |||||  || ||||||||||||||||    
21195020 aatcatgatttatgaacacccaagccatgaatcatcaacaacaatatctcttaacaacaacaacattaattaaacatgattctcatcacaattcaacaac 21195119  T
163 aac 165  Q
    |||    
21195120 aac 21195122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 119; Significance: 6e-61; HSPs: 2)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 63 - 197
Target Start/End: Original strand, 1323 - 1457
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
1323 aatcatgaatcatgcaaacccaagccatgaatgatcatcaacaacatgacatatcaacaacaacatcaattgatcatgaaacttatcacaattcaacaac 1422  T
163 aacaatgcataattcaccaattgagcatattttca 197  Q
    ||||| |||||||||||||||| ||||||||||||    
1423 aacaaagcataattcaccaattaagcatattttca 1457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359; HSP #2
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 79 - 200
Target Start/End: Complemental strand, 11876 - 11758
Alignment:
79 aacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattca 178  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||   |||||||||||||||| |||||||||| ||||||||||||||||||||    
11876 aacccaagccatgaattatcatcaacaacatgacttaacaacaacaaca---attgatcatgaaacttttcacaattcatcaacaacaatgcataattca 11780  T
179 ccaattgagcatattttcaaca 200  Q
    | ||||||||||||||||||||    
11779 ctaattgagcatattttcaaca 11758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 119; Significance: 6e-61; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 39 - 200
Target Start/End: Complemental strand, 132516 - 132354
Alignment:
39 aacaacaattcatttcttgacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatc 137  Q
    ||||||| |||||||||  ||||||| | |||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||    
132516 aacaacatttcatttctcaacaacaaaccatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttaacaacaacaacatcaattgatc 132417  T
138 atgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatattttcaaca 200  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
132416 atgaaacttatcacaattcatcaacaacgatgcataattcaccaattgagcatattttcaaca 132354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 31 - 199
Target Start/End: Original strand, 11660 - 11830
Alignment:
31 aaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatc 129  Q
    ||||||| |||||||  ||||||||  ||||||| |||||||||||||| | |||||||||||||||||||||||||| | || || ||| |||||||||    
11660 aaaccaccaacaacatctcatttctcaacaacaaatcatgaatcatgcataaccaagccatgaattatcatcaacaacgtcacttagcaacaacaacatc 11759  T
130 aattgatcatgaaacttatcacaattcaacaacaacaatgcataattc-accaattgagcatattttcaac 199  Q
    ||||||||||||||||||||||||||| |||||||||  ||||||||| ||||||||||||| ||||||||    
11760 aattgatcatgaaacttatcacaattctacaacaacatagcataattcaaccaattgagcatgttttcaac 11830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 71 - 200
Target Start/End: Original strand, 88289 - 88418
Alignment:
71 atcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgc 170  Q
    |||||||| |||||||||| |||||| |||| | ||||| || || ||| | ||||||| ||||||||||||||||||||||||||| ||||||||  ||    
88289 atcatgcatacccaagccaagaattagcatccataacatcacttaacaacagcaacatctattgatcatgaaacttatcacaattcatcaacaacatagc 88388  T
171 ataattcaccaattgagcatattttcaaca 200  Q
    |||||||||||||||| |||||||||||||    
88389 ataattcaccaattgatcatattttcaaca 88418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 117; Significance: 9e-60; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 31 - 218
Target Start/End: Original strand, 8960 - 9148
Alignment:
31 aaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatc 129  Q
    ||||||| |||||||  ||||||||  ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| || ||| |||||||||    
8960 aaaccaccaacaacatctcatttctcaacaacaaatcatgaatcaagcaaacccaagccatgaattatcatcaacaacatgacttagcaacaacaacatc 9059  T
130 aattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatattttcaacataaaccaacttctcatac 218  Q
    || ||||| ||||||||||||||| ||| ||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||    
9060 aagtgatcttgaaacttatcacaaatcatcaacaacatagcataattcaccaattgagcatattttcaacatataccaacttctcatac 9148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 117; Significance: 9e-60; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 23 - 218
Target Start/End: Original strand, 4906 - 5102
Alignment:
23 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaa 121  Q
    |||| |||||||||| ||||||||| |||||||   || ||| |||||||| ||| | | ||||||||||||||||||||||||||||||| || ||| |    
4906 atttcacaaaaccaccaacaacaatccatttctcatcagcaaatcatgaattatgaacaaccaagccatgaattatcatcaacaacatgacttagcaaca 5005  T
122 acaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatattttcaacataaaccaacttctcatac 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||| |||||||||||||||    
5006 acaacatcaattgatcatgaaacttatcacaattcaacaacaacaaatcataattcaccaattaagcatattttcaacatataccaacttctcatac 5102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 115; Significance: 1e-58; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 66 - 200
Target Start/End: Original strand, 22700 - 22834
Alignment:
66 catgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaac 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||| ||||||     
22700 catgaatcatgcaaacccaagccatgaattatcatcaacaacatgacaaaacaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaaa 22799  T
166 aatgcataattcaccaattgagcatattttcaaca 200  Q
    |||||||||||||||||||||||||||||||||||    
22800 aatgcataattcaccaattgagcatattttcaaca 22834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673 (Bit Score: 114; Significance: 5e-58; HSPs: 2)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 66 - 199
Target Start/End: Complemental strand, 1060 - 927
Alignment:
66 catgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaac 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||| ||| |||    
1060 catgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaacaacaacaacaattgatcatgaaacttatcacaaatcatcaataac 961  T
166 aatgcataattcaccaattgagcatattttcaac 199  Q
    ||||||||||||||||||||||||||||||||||    
960 aatgcataattcaccaattgagcatattttcaac 927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 69 - 197
Target Start/End: Complemental strand, 7083 - 6952
Alignment:
69 gaatcatgcaaacccaagccatgaattatcatcaacaacatgac---atatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaac 165  Q
    |||| |||||||||||||||||||||||||||||||||||||||   | | ||| ||||||| ||||||||||||||||||||||||||||| |||||||    
7083 gaattatgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaacaacaacaattgatcatgaaacttatcacaattcatcaacaac 6984  T
166 aatgcataattcaccaattgagcatattttca 197  Q
    ||||||||||||||||||||||||||||||||    
6983 aatgcataattcaccaattgagcatattttca 6952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 114; Significance: 5e-58; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 63 - 200
Target Start/End: Original strand, 60812 - 60949
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
60812 aatcatgaatcatgcaaacccaagtcatgaattatcatcaacaacatgacatatcaacaacaacatcaattgatcatgaaacttatcacaattcaacaac 60911  T
163 aacaatgcataattcaccaattgagcatattttcaaca 200  Q
    ||||| |||||||||||||||| || ||||||| ||||    
60912 aacaaagcataattcaccaattaagtatatttttaaca 60949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 66 - 218
Target Start/End: Complemental strand, 70860 - 70708
Alignment:
66 catgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaac 165  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||  | ||| ||||||||| | ||||||||||||||||||||||||| ||||||     
70860 catgaatcatgcaaacccaagtcatgaattatcatcaacaacatgactaaacaacaacaacatccaatgatcatgaaacttatcacaattcatcaacaat 70761  T
166 aatgcataattcaccaattgagcatattttcaacataaaccaacttctcatac 218  Q
    ||||||||||||||||||||||||||||||||||| | ||| |||| ||||||    
70760 aatgcataattcaccaattgagcatattttcaacacatacctacttttcatac 70708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 39 - 218
Target Start/End: Complemental strand, 842 - 662
Alignment:
39 aacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatc 137  Q
    |||||||  ||||||||  ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||    
842 aacaacatctcatttctcaacaacaaatcatgaatcatgccaacccaagccatgaattatcatcaacaacatgacttagcaacaacaacatcaattgatc 743  T
138 atgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatattttcaacataaaccaacttctcatac 218  Q
    |||||||||||||||||||| ||||||||  |||||||||||||| ||||||||||||||||||| ||||  |||||||||    
742 atgaaacttatcacaattcatcaacaacatagcataattcaccaaatgagcatattttcaacatataccattttctcatac 662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 112; Significance: 9e-57; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 48 - 199
Target Start/End: Complemental strand, 11964 - 11813
Alignment:
48 tcatttcttgacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaactta 147  Q
    ||||||||  ||| |||||||||| ||||||||| |||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||    
11964 tcatttctcaacaccaatcatgaaccatgcaaactcaagccatgaattatcatcaacaacatgacttagcaacaacaacatcaattgatcatgaaactta 11865  T
148 tcacaattcaacaacaacaatgcataattcaccaattgagcatattttcaac 199  Q
    ||| |||||| |||||||||||||||||||||||||||||||||||||||||    
11864 tcaaaattcatcaacaacaatgcataattcaccaattgagcatattttcaac 11813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 110; Significance: 1e-55; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 63 - 200
Target Start/End: Complemental strand, 11809 - 11672
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||    
11809 aatcatgaattatgcaaacccaagtcatgaattatcatcaacaacatgacatatcaacaacaacataaattgatcatgaaactgatcacaattcaacaac 11710  T
163 aacaatgcataattcaccaattgagcatattttcaaca 200  Q
    ||||| |||||||||||||||| |||||||||||||||    
11709 aacaaagcataattcaccaattaagcatattttcaaca 11672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 109; Significance: 5e-55; HSPs: 2)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 39 - 218
Target Start/End: Original strand, 2 - 182
Alignment:
39 aacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatc 137  Q
    ||||||||| |||||||  ||||||| | ||||| |||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||    
2 aacaacaatccatttctcaacaacaaataatgaaacatgcaaacccaagccatgaattatcatcaacaagatgacatagcaacaacaacatcaattgatc 101  T
138 atgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatattttcaacataaaccaacttctcatac 218  Q
    |||||||||||||||||||| |||| ||   ||||||||||| |||||||||||||||||||||| ||||| |||||||||    
102 atgaaacttatcacaattcatcaaccacgtagcataattcacgaattgagcatattttcaacatataccaatttctcatac 182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 31 - 131
Target Start/End: Original strand, 3492 - 3593
Alignment:
31 aaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatc 129  Q
    ||||||| ||||||| | |||||||  ||||||| | ||||| |||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||    
3492 aaaccaccaacaacattccatttctcaacaacaaataatgaaacatgcaaacccaagccatgaattatcatcaacaagatgacatagcaacaacaacatc 3591  T
130 aa 131  Q
    ||    
3592 aa 3593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 108; Significance: 2e-54; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 63 - 218
Target Start/End: Original strand, 85338 - 85493
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||| ||||    
85338 aatcatgaatcatgcaaacccaaaccatgaattatcatcaacaacatgacttagcaacaacaacatcaattgatcatgaaacttatcacaattcatcaac 85437  T
163 aacaatgcataattcaccaattgagcatattttcaacataaaccaacttctcatac 218  Q
    |||   |||||||||||||||| ||||||||||||| ||| ||||| |||||||||    
85438 aacctagcataattcaccaattaagcatattttcaatatataccaatttctcatac 85493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 31 - 199
Target Start/End: Original strand, 159275 - 159442
Alignment:
31 aaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatc 129  Q
    ||||||| |||||||  ||||||||  ||||||| |||||||||||||| ||||||||||  |||||||||||||| ||   | || ||| |||||||||    
159275 aaaccaccaacaacatctcatttctcaacaacaaatcatgaatcatgcatacccaagccaaaaattatcatcaacatca---cttagcaacaacaacatc 159371  T
130 aattgatcatgaaacttatcacaattcaacaacaacaatgcataattc-accaattgagcatattttcaac 199  Q
    ||||||||||||||||||||||||||||||| |||||  ||||||||| |||||||||||||| |||||||    
159372 aattgatcatgaaacttatcacaattcaacatcaacatagcataattcaaccaattgagcataatttcaac 159442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 69 - 202
Target Start/End: Original strand, 7581 - 7714
Alignment:
69 gaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaat 168  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||| |||| | ||||||||||    
7581 gaatcatgcaaacccaagccatgaattatcatcaacaacatgacttaacaacaacaacatcaattgatcatgaaacttatcataatttatcaacaacaat 7680  T
169 gcataattcaccaattgagcatattttcaacata 202  Q
    ||||||||||||||||||||||||||||| ||||    
7681 gcataattcaccaattgagcatattttcatcata 7714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 105; Significance: 1e-52; HSPs: 3)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 39 - 202
Target Start/End: Complemental strand, 784 - 620
Alignment:
39 aacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatc 137  Q
    |||||||  ||||||||  ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||  || |||||||||||||||||    
784 aacaacatctcatttctcaacaacaaatcatgaatcatgccaacccaagccatgaattatcatcaacaacatgacttagtaacaacaacatcaattgatc 685  T
138 atgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatattttcaacata 202  Q
    |||||||||||||||||||| ||||||||  |||||||||||||| |||||||||||||||||||    
684 atgaaacttatcacaattcatcaacaacatagcataattcaccaaatgagcatattttcaacata 620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 189
Target Start/End: Original strand, 19216 - 19339
Alignment:
65 tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaa 164  Q
    |||||||| ||||| |||||||| |||| | |||| ||||||||| |  || ||  || |||||||||||| || ||| | || | ||||||||||||||    
19216 tcatgaat-atgcatacccaagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacaggaatcataactcaattcaacaacaa 19314  T
165 caatgcataattcaccaattgagca 189  Q
    |   ||| |||||||||||||||||    
19315 cttagcaaaattcaccaattgagca 19339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 189
Target Start/End: Original strand, 21300 - 21423
Alignment:
65 tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaa 164  Q
    |||||||| ||||| |||||||| |||| | |||| ||||||||| |  || ||  || |||||||||||| || ||| | || | ||||||||||||||    
21300 tcatgaat-atgcatacccaagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacaggaatcataactcaattcaacaacaa 21398  T
165 caatgcataattcaccaattgagca 189  Q
    |   ||| |||||||||||||||||    
21399 cttagcaaaattcaccaattgagca 21423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 10 - 218
Target Start/End: Original strand, 1332 - 1542
Alignment:
10 tcattatcaacccatttt-acaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaac 107  Q
    |||| ||||||||||||| || ||| ||| |||||||  ||||||||  ||||||| |||||||||||||||||||||||||||| ||||||||||||||    
1332 tcataatcaacccattttcaccaaaacaccaacaacatctcatttctcaacaacaaatcatgaatcatgcaaacccaagccatgatttatcatcaacaac 1431  T
108 atgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatattttcaacataaacca 207  Q
    |||||||| ||| | ||||||  ||||||||||||||||||||||||||| |||  |||   ||||||||| ||||||||||||||||||||||| ||||    
1432 atgacatagcaacagcaacatttattgatcatgaaacttatcacaattcatcaatcacataacataattcaacaattgagcatattttcaacatatacca 1531  T
208 acttctcatac 218  Q
    | |||||||||    
1532 atttctcatac 1542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 103; Significance: 2e-51; HSPs: 2)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 66 - 196
Target Start/End: Complemental strand, 5484 - 5354
Alignment:
66 catgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaac 165  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| || ||| |||||||||||||||||||||||| |||||||||||| |||||||    
5484 catgaatcatgcaaacccaaaccatgaattatcatcaacaacatgacttagcaacaacaacatcaattgatcatgaaacatatcacaattcatcaacaac 5385  T
166 aatgcataattcaccaattgagcatattttc 196  Q
    ||||| |||||||||||||||||||||||||    
5384 aatgcctaattcaccaattgagcatattttc 5354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 31 - 192
Target Start/End: Complemental strand, 9156 - 8993
Alignment:
31 aaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatc 129  Q
    |||||||  ||||||  ||||||||  ||||||| |||||||||||||| ||| |||||||||||||||||||||||||| || || ||| |||||||||    
9156 aaaccaccgacaacatctcatttctcaacaacaaatcatgaatcatgcatacctaagccatgaattatcatcaacaacatcacttagcaacaacaacatc 9057  T
130 aattgatcatgaaacttatcacaattcaacaacaacaatgcataattc-accaattgagcatat 192  Q
    |||||||||||||||||||||||||| ||||||||||  ||||||||| |||||||||||||||    
9056 aattgatcatgaaacttatcacaatttaacaacaacatagcataattcaaccaattgagcatat 8993  T

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Target: scaffold0044 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 66 - 202
Target Start/End: Original strand, 38307 - 38443
Alignment:
66 catgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaac 165  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||  | ||| |||||| |||||||||||||||||||||||||||||| |||||||    
38307 catgaatcatgcaaacccaagttatgaattatcatcaacaacatgactaaacaacaacaacgtcaattgatcatgaaacttatcacaattcatcaacaac 38406  T
166 aatgcataattcaccaattgagcatattttcaacata 202  Q
    |||||||||||| ||||||||||||||||||||||||    
38407 aatgcataattcgccaattgagcatattttcaacata 38443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 99; Significance: 5e-49; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 39 - 218
Target Start/End: Complemental strand, 112808 - 112631
Alignment:
39 aacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatc 137  Q
    |||||||  ||||||||  ||||||| |||||||||||||||||||||||||||||||||||   |||||||||| || ||| |||||||| ||||||||    
112808 aacaacatctcatttctcaacaacaaatcatgaatcatgcaaacccaagccatgaattatca---acaacatgacttaacaacaacaacataaattgatc 112712  T
138 atgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatattttcaacataaaccaacttctcatac 218  Q
    |||||||||||||||||||| |||| |||  ||||||||||| |||||||||||||||||||||| ||||| |||||||||    
112711 atgaaacttatcacaattcatcaaccacatagcataattcactaattgagcatattttcaacatataccaatttctcatac 112631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 63 - 218
Target Start/End: Original strand, 109596 - 109751
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||| || || ||| ||||||||||| |||||||||| |||||||||||||||||||    
109596 aatcatgaatcgtgcatacccaagccatgaattatcatcaacaacatcacttagcaacaacaacatcaactgatcatgaatcttatcacaattcaacaac 109695  T
163 aacaatgcataattcaccaa-ttgagcatattttcaacataaaccaacttctcatac 218  Q
    ||||  ||| |||||| ||| ||||||||| |||||||||| ||||  |||||||||    
109696 aacatagcaaaattcaacaatttgagcata-tttcaacatataccactttctcatac 109751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 178
Target Start/End: Complemental strand, 103211 - 103048
Alignment:
16 tcaacccattttacaaaaccactaacaacaattcatttcttgacaacaat-catgaatcatgcaaacccaagccatgaattatcatcaacaacatgacat 114  Q
    |||||||||||||||||  ||| |||||||| |||||| |   ||||||| ||||||| ||||| |||||| ||||||||||||||||||||||| || |    
103211 tcaacccattttacaaagtcaccaacaacaactcatttatcaccaacaattcatgaattatgcacacccaaaccatgaattatcatcaacaacatcactt 103112  T
115 atcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattca 178  Q
    |  || || |||||||||||| ||||||  ||||||||||||||||||||||  ||||||||||    
103111 agaaacaataacatcaattgaacatgaatgttatcacaattcaacaacaacatagcataattca 103048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 74 - 198
Target Start/End: Original strand, 32220 - 32344
Alignment:
74 atgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcata 173  Q
    |||||||||||||||||||||||||||||||||||||||  | ||| ||||||| |||||||||||||||| |||||||||||| |||||||||| ||||    
32220 atgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaacaattcata 32319  T
174 attcaccaattgagcatattttcaa 198  Q
    |||||||||||||||||||||||||    
32320 attcaccaattgagcatattttcaa 32344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 74 - 198
Target Start/End: Complemental strand, 42083 - 41959
Alignment:
74 atgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcata 173  Q
    |||||||||||||||||||||||||||||||||||||||  | ||| ||||||| |||||||||||||||| |||||||||||| |||||||||| ||||    
42083 atgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaacaattcata 41984  T
174 attcaccaattgagcatattttcaa 198  Q
    |||||||||||||||||||||||||    
41983 attcaccaattgagcatattttcaa 41959  T

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Target: scaffold0083 (Bit Score: 91; Significance: 3e-44; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 69 - 197
Target Start/End: Original strand, 14889 - 15014
Alignment:
69 gaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaat 168  Q
    |||| |||||||||||||||||||||||||||||||||||||||   | || ||||||| |||||||||||||||| |||||||||||| ||||||||||    
14889 gaattatgcaaacccaagccatgaattatcatcaacaacatgac---taaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaacaat 14985  T
169 gcataattcaccaattgagcatattttca 197  Q
    |||||||||||||||||||||||||||||    
14986 gcataattcaccaattgagcatattttca 15014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 69 - 112
Target Start/End: Original strand, 14229 - 14272
Alignment:
69 gaatcatgcaaacccaagccatgaattatcatcaacaacatgac 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
14229 gaattatgcaaacccaagccatgaattatcatcaacaacatgac 14272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 23 - 191
Target Start/End: Complemental strand, 6373 - 6204
Alignment:
23 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaa 121  Q
    |||| |||||||||| ||||||||| |||||||  ||||||| |||||||||||||||||||||| |||| || ||||||||||| || ||  | ||| |    
6373 atttcacaaaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagtcatgtatcatcatcaacaatattactaaacaaca 6274  T
122 acaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcata 191  Q
    |||||| | |||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||    
6273 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 6204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 23 - 191
Target Start/End: Complemental strand, 31570 - 31401
Alignment:
23 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaa 121  Q
    |||| |||||||||| ||||||||| |||||||  ||||||| | |||||||||||||||| |||||||| || ||||||||||| |||||  | ||| |    
31570 atttcacaaaaccaccaacaacaatccatttctcaacaacaaattatgaatcatgcaaacctaagccatgtatcatcatcaacaatatgactaaacaaca 31471  T
122 acaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcata 191  Q
    |||||| | |||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||    
31470 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 31401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 23 - 191
Target Start/End: Original strand, 41274 - 41443
Alignment:
23 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaa 121  Q
    |||| |||||||||| ||||||||| |||||||  ||||||| | |||||||||||||||| |||||||| || ||||||||||| |||||  | ||| |    
41274 atttcacaaaaccaccaacaacaatccatttctcaacaacaaattatgaatcatgcaaacctaagccatgtatcatcatcaacaatatgactaaacaaca 41373  T
122 acaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcata 191  Q
    |||||| | |||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||    
41374 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 41443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 85; Significance: 1e-40; HSPs: 4)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 69 - 197
Target Start/End: Original strand, 164227 - 164355
Alignment:
69 gaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaat 168  Q
    |||| ||||||||||||||||||||||| |||||||||||||||  | ||| ||||||| || ||||||||||||| |||||||||||| ||||||||||    
164227 gaattatgcaaacccaagccatgaattaccatcaacaacatgactaaacaacaacaacaacatttgatcatgaaacatatcacaattcatcaacaacaat 164326  T
169 gcataattcaccaattgagcatattttca 197  Q
    |||||||||||||||||||||||| ||||    
164327 gcataattcaccaattgagcatatcttca 164355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 23 - 191
Target Start/End: Complemental strand, 162469 - 162299
Alignment:
23 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaa- 120  Q
    |||| |||||||||| ||||||||| |||||||  ||||||| ||||||||||||||||||||||||||  || ||||||||||| |||||  | ||||     
162469 atttcacaaaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagccatatatcatcatcaacaatatgactaaacaaac 162370  T
121 aacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcata 191  Q
    ||||||| | |||||||||||||| |||||||||||| ||||||| ||||| |||||||||||||||||||    
162369 aacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcagaattcaccaattgagcata 162299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 23 - 191
Target Start/End: Complemental strand, 166547 - 166385
Alignment:
23 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaa 121  Q
    |||| |||||||||| ||||||||| ||||| |  ||||||| ||||||||||||||||||||||||||| || |||||||||||       ||| || |    
166547 atttcacaaaaccaccaacaacaatccatttttcaacaacaaatcatgaatcatgcaaacccaagccatgtatcatcatcaacaa-------tattaaca 166455  T
122 acaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcata 191  Q
    |||||| | |||||||||||||| |||||||||||| ||||||| ||||| |||||||||||||||||||    
166454 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcagaattcaccaattgagcata 166385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 116795 - 116687
Alignment:
23 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaa 121  Q
    ||||||||||||||| ||||||||| ||||| |   |||||| |||||||| ||| | ||||||||||||||| |||| |||||| || || || ||| |    
116795 attttacaaaaccaccaacaacaatccatttttcatcaacaaatcatgaattatgaacacccaagccatgaatcatcaacaacaatatcacttagcaaca 116696  T
122 acaacatca 130  Q
    |||||||||    
116695 acaacatca 116687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 31 - 207
Target Start/End: Original strand, 1889 - 2066
Alignment:
31 aaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatc 129  Q
    |||||||||||||||  ||||||||  ||||||| |||||||||||||| || ||||||| |||||||||||| ||||||||| || ||| |||||||||    
1889 aaaccactaacaacatctcatttctcaacaacaaatcatgaatcatgcatactcaagccaagaattatcatcatcaacatgacttagcaacaacaacatc 1988  T
130 aattgatcatgaaacttatcacaattcaacaacaacaatgcataattc-accaattgagcatattttcaacataaacca 207  Q
    ||||||||||||| ||||| |||| |||||||| |||  ||||||||| |||||||||||||||||||| |||| ||||    
1989 aattgatcatgaatcttataacaaatcaacaac-acatagcataattcaaccaattgagcatattttcatcatatacca 2066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 19 - 197
Target Start/End: Complemental strand, 15761 - 15578
Alignment:
19 acccatttt-acaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgac---a 113  Q
    ||||||||| || ||||||  |||||||||| ||||||  |||| || | |||||||||||| ||||||||||||||||| |||| | ||||||||   |    
15761 acccattttcaccaaaccaacaacaacaatttatttctcaacaaaaaattatgaatcatgcatacccaagccatgaattagcatctataacatgactaaa 15662  T
114 tatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatattttca 197  Q
     | ||| ||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
15661 caacaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaacaatgcataattcaccaattgagcatattttca 15578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 82; Significance: 7e-39; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 24 - 207
Target Start/End: Original strand, 31010 - 31194
Alignment:
24 ttttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaa 122  Q
    |||||| ||| ||| |||||||  ||||||||  ||||||| |||||||||||||| ||||||||||| |||||||||||| ||| | ||||||||  ||    
31010 ttttaccaaaacaccaacaacatctcatttctcaacaacaagtcatgaatcatgcatacccaagccataaattatcatcaaaaacctcacatatcagcaa 31109  T
123 caacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataa-ttcaccaattgagcatattttcaacataaacca 207  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||  ||||| || || |||||||||||||||||||||| ||||    
31110 caacatcaattaatcatgaaacttatcacaattcaacaactacaa-acataacttaacaaattgagcatattttcaacatatacca 31194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 98 - 202
Target Start/End: Original strand, 70654 - 70759
Alignment:
98 catcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattc-accaattgagcatattttc 196  Q
    |||||||||||| | ||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||    
70654 catcaacaacatcatatatcagcaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaaccaattaagcatattttc 70753  T
197 aacata 202  Q
    ||||||    
70754 aacata 70759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 178
Target Start/End: Complemental strand, 97487 - 97324
Alignment:
16 tcaacccattttacaaaaccactaacaacaattcatttcttgacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacat 114  Q
    ||||||||||||||||||||| ||||||||| ||| |||||  || | |||||||| | ||| ||||||||| ||||||| |||| ||| || || |  |    
97487 tcaacccattttacaaaaccaataacaacaactcaattcttatcatcaaatcatgatttatgaaaacccaaggcatgaatcatcaacaataatatcaatt 97388  T
115 atcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattca 178  Q
    |  || ||||| ||||||||| |||||| || |||| ||||||||| |||||  ||||||||||    
97387 agtaacaacaatatcaattgaacatgaatctcatcataattcaacaccaacatagcataattca 97324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 67 - 191
Target Start/End: Complemental strand, 17649 - 17525
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||||||| ||||||||||||||||| |||| | ||||| || || ||| ||||||||| ||||||||||||||||||||||||||| |||||||     
17649 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaacc 17550  T
167 atgcataattcaccaattgagcata 191  Q
    |||||||||||||||||||||||||    
17549 atgcataattcaccaattgagcata 17525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 24 - 194
Target Start/End: Complemental strand, 34008 - 33837
Alignment:
24 ttttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaa 122  Q
    |||||| |||| || |||||||  ||||||||  ||||||| |||| ||||||||| |||||||||||||||||| ||||||||||| || || ||| ||    
34008 ttttaccaaactaccaacaacatctcatttctcaacaacaaatcat-aatcatgcatacccaagccatgaattattatcaacaacatcacttagcaacaa 33910  T
123 caacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattc-accaattgagcatattt 194  Q
    |||||||||||||||||||| |||||||||||||||||||||||  ||||||||| ||||||| |||||||||    
33909 caacatcaattgatcatgaatcttatcacaattcaacaacaacatagcataattcaaccaatttagcatattt 33837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 81; Significance: 3e-38; HSPs: 3)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 67 - 191
Target Start/End: Original strand, 55591 - 55715
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||||||| ||||||||||||||||| |||| | ||||| || || ||| ||||||||| ||||||||||||||||||||||||||| |||||||     
55591 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaacc 55690  T
167 atgcataattcaccaattgagcata 191  Q
    |||||||||||||||||||||||||    
55691 atgcataattcaccaattgagcata 55715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 16 - 163
Target Start/End: Complemental strand, 94061 - 93913
Alignment:
16 tcaacccattttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacat 114  Q
    |||||||||||||||||  ||| |||||||  ||||||||   |||||| |||||||| |||   ||||||  |||||||||||||||||||||| || |    
94061 tcaacccattttacaaagtcaccaacaacatctcatttctcaccaacaaatcatgaattatgttcacccaaatcatgaattatcatcaacaacatcactt 93962  T
115 atcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaaca 163  Q
    || || ||||||||||||||| ||||||  | ||||||||| |||||||    
93961 attaataacaacatcaattgaacatgaatttcatcacaatttaacaaca 93913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 133
Target Start/End: Complemental strand, 104861 - 104793
Alignment:
65 tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaatt 133  Q
    |||||||| ||| | ||||||||||||||| |||| |||||| || || || ||| |||||||||||||    
104861 tcatgaattatgaatacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaatt 104793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 23 - 165
Target Start/End: Original strand, 30056 - 30199
Alignment:
23 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaa 121  Q
    |||| |||||||||| ||||||||| |||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||  | ||| |    
30056 atttcacaaaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaatatgactaaacaaca 30155  T
122 acaacatcaattgatcatgaaacttatcacaattcaacaacaac 165  Q
    |||||| | |||||||||||||| |||||||||||| |||||||    
30156 acaacaaccattgatcatgaaacatatcacaattcatcaacaac 30199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 67 - 200
Target Start/End: Original strand, 146611 - 146744
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||||||| ||||||||||||||||| |||  | ||||| || || ||| ||||||||| ||||||||||||||||||||||||||| |||||||     
146611 atgaatcatgcatacccaagccatgaattaacatgcataacatcacttaacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaacc 146710  T
167 atgcataattcaccaattgagcatattttcaaca 200  Q
      ||||||||||||||||||||||||||||||||    
146711 tagcataattcaccaattgagcatattttcaaca 146744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 189
Target Start/End: Original strand, 8917 - 8982
Alignment:
124 aacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagca 189  Q
    |||||||||||| ||| || | |||| |||||||||||||||   ||| |||||||||||||||||    
8917 aacatcaattgaacattaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagca 8982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 77; Significance: 7e-36; HSPs: 2)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 67 - 191
Target Start/End: Complemental strand, 13631 - 13507
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||||||| ||||||||||||||||| |||| | ||||| || || ||| ||||||||| |||||||||||||| |||||||||||| |||||||     
13631 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattgatcatgaaacatatcacaattcatcaacaacc 13532  T
167 atgcataattcaccaattgagcata 191  Q
    |||||||||||||||||||||||||    
13531 atgcataattcaccaattgagcata 13507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 67 - 191
Target Start/End: Complemental strand, 21605 - 21481
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||||||| ||||||||||||||||| |||  | ||||| || || ||| ||||||||| |||||||||||||| |||||||||||| |||||||     
21605 atgaatcatgcatacccaagccatgaattagcattcataacatcacttaacaacaacaacatctattgatcatgaaacatatcacaattcatcaacaacc 21506  T
167 atgcataattcaccaattgagcata 191  Q
    |||||||||||||||||||||||||    
21505 atgcataattcaccaattgagcata 21481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 67 - 191
Target Start/End: Original strand, 14959 - 15083
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||||||| ||||||||||||||||| |||| | ||||| || || ||| ||||||||| |||||||||||||| |||||||||||| |||||||     
14959 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattgatcatgaaacatatcacaattcatcaacaacc 15058  T
167 atgcataattcaccaattgagcata 191  Q
    |||||||||||||||||||||||||    
15059 atgcataattcaccaattgagcata 15083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 63 - 218
Target Start/End: Original strand, 3325 - 3480
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||||||||| ||||||||||||||||| |||| ||||||| || || ||| | |||||||||||||||||||| |||||||||||||||| ||    
3325 aatcatgaatcatgcatacccaagccatgaattaacatccacaacatcacttagcaacatcaacatcaattgatcatgaatcttatcacaattcaactac 3424  T
163 aacaatgcataatt-caccaattgagcatattttcaacataaaccaacttctcatac 218  Q
    ||||  ||||||||  ||||||||||||||||||| ||||| ||||  |||||||||    
3425 aacatagcataattggaccaattgagcatattttc-acatataccactttctcatac 3480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 77; Significance: 7e-36; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 63 - 195
Target Start/End: Original strand, 48154 - 48285
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||| | || ||| || || | |||||||||||||||||| |||||||||| ||||    
48154 aatcatgaattatgcaa-cccaagccatgaattatcatcaacaacatggcttaacaacaataataacaattgatcatgaaacttttcacaattcatcaac 48252  T
163 aacaatgcataattcaccaattgagcatatttt 195  Q
    |||||  ||||||||||||||||||||||||||    
48253 aacaaaacataattcaccaattgagcatatttt 48285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 63 - 195
Target Start/End: Original strand, 61602 - 61733
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||| | || ||| || || | |||||||||||||||||| |||||||||| ||||    
61602 aatcatgaattatgcaa-cccaagccatgaattatcatcaacaacatggcttaacaacaataataacaattgatcatgaaacttttcacaattcatcaac 61700  T
163 aacaatgcataattcaccaattgagcatatttt 195  Q
    |||||  ||||||||||||||||||||||||||    
61701 aacaaaacataattcaccaattgagcatatttt 61733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 77; Significance: 7e-36; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 67 - 191
Target Start/End: Original strand, 94985 - 95109
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||||||| |||||| |||||||||| |||| | ||||| || |||||| ||||||||| ||||||||||||||||||||||||||| |||||||     
94985 atgaatcatgcatacccaaaccatgaattagcatccataacatcacttatcaacaacaacatctattgatcatgaaacttatcacaattcatcaacaacc 95084  T
167 atgcataattcaccaattgagcata 191  Q
    ||||||||||||| |||||||||||    
95085 atgcataattcactaattgagcata 95109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 67 - 200
Target Start/End: Complemental strand, 24965 - 24832
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||||| | |||||||||| |||||| |||| | ||||| || || ||| ||||||||| ||||||||||||||||||||||||||| ||||||||    
24965 atgaatcatgaatacccaagccaagaattaacatccataacatcacttaacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaaca 24866  T
167 atgcataattcaccaattgagcatattttcaaca 200  Q
      |||||||||||||||||||||||| |||||||    
24865 tagcataattcaccaattgagcatatgttcaaca 24832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 63 - 218
Target Start/End: Original strand, 33668 - 33823
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||| ||| | |||| |||||||||| |||| |||||| || || || ||| |||||||||||||||||||||||||||||| |||||| ||||    
33668 aatcatgaattatgaacaccctagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgatcatgaaacttatcaaaattcatcaac 33767  T
163 aacaatgcataattcaccaattgagcatattttcaacataaaccaacttctcatac 218  Q
    ||||  |||||||||||||||| | |||| |||||||||| ||||| |||||||||    
33768 aacatagcataattcaccaattaaacataatttcaacatataccaatttctcatac 33823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 75; Significance: 1e-34; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 63 - 197
Target Start/End: Original strand, 46171 - 46305
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||| ||| | ||||||||||||||| |||| |||||| || || ||  || ||||||||| ||||||||||||||||||||||||| ||||||    
46171 aatcatgaattatgaacacccaagccatgaatcatcaacaacaatatcacttagaaacaacaacatccattgatcatgaaacttatcacaatttaacaac 46270  T
163 aacaatgcataattcaccaattgagcatattttca 197  Q
    ||||  |||||||||||||||||||||||||||||    
46271 aacatagcataattcaccaattgagcatattttca 46305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 63 - 197
Target Start/End: Original strand, 40664 - 40798
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    |||||||||| ||| | ||||||||||||||| |||| |||||| || || || ||| ||||||||| ||||||||||||||||||||||||  ||||||    
40664 aatcatgaattatgaacacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatccattgatcatgaaacttatcacaatgtaacaac 40763  T
163 aacaatgcataattcaccaattgagcatattttca 197  Q
    || |  |||||||||||||||||||||||||||||    
40764 aatatagcataattcaccaattgagcatattttca 40798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 67 - 191
Target Start/End: Original strand, 79874 - 79998
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||||||| ||||||||||||||||||||||||| | |||||  | ||| ||||||| | ||| |||||||||| |||||||||||| ||||||      
79874 atgaatcatgcatacccaagccatgaattatcatcaaccatatgactaaacaacaacaacaaccattaatcatgaaacatatcacaattcatcaacaatc 79973  T
167 atgcataattcaccaattgagcata 191  Q
    |||||||||||||||||||||||||    
79974 atgcataattcaccaattgagcata 79998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 74; Significance: 4e-34; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 39 - 191
Target Start/End: Complemental strand, 12794 - 12641
Alignment:
39 aacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatc 137  Q
    |||||||||| ||||||  ||||||| | |||||||||||| ||||||||||||||||||||||||| | |||||  | ||| ||||||| | ||| |||    
12794 aacaacaatttatttctcaacaacaaattatgaatcatgcatacccaagccatgaattatcatcaaccatatgactaaacaacaacaacaaccattaatc 12695  T
138 atgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcata 191  Q
    ||||||| |||||||||||| ||||||  |||||||||||||||||||||||||    
12694 atgaaacatatcacaattcatcaacaatcatgcataattcaccaattgagcata 12641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 39 - 164
Target Start/End: Complemental strand, 19175 - 19049
Alignment:
39 aacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatc 137  Q
    |||||||||| ||||||  ||||||| | |||||||||||| ||||||||||||||||||||||||| | |||||  | ||| ||||||| | ||| |||    
19175 aacaacaatttatttctcaacaacaaattatgaatcatgcatacccaagccatgaattatcatcaaccatatgactaaacaacaacaacaaccattaatc 19076  T
138 atgaaacttatcacaattcaacaacaa 164  Q
    ||||||| |||||||||||| ||||||    
19075 atgaaacatatcacaattcatcaacaa 19049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 67 - 191
Target Start/End: Complemental strand, 6788 - 6664
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||||||| ||||||||||||||||| |||| | ||||| || || ||| ||||| ||| ||||||||| ||||||||||||||||| |||||||     
6788 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaagatctattgatcatcaaacttatcacaattcatcaacaacc 6689  T
167 atgcataattcaccaattgagcata 191  Q
    |||||||||||||||||||||||||    
6688 atgcataattcaccaattgagcata 6664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 67 - 191
Target Start/End: Complemental strand, 1223 - 1099
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||||||| ||||||||||||||||| |||  | ||||| || || ||| ||||||||| |||||||||||||| |||||||||||| |||||||     
1223 atgaatcatgcatacccaagccatgaattagcattcataacatcacttaacaacaacaacatctattgatcatgaaacatatcacaattcatcaacaacc 1124  T
167 atgcataattcaccaattgagcata 191  Q
    |||||||||||||||||||||||||    
1123 atgcataattcaccaattgagcata 1099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 28479 - 28663
Alignment:
1 caaacttcttcattatcaacccattttacaaaaccactaacaacaattcatttcttgacaa-caatcatgaatcatgcaaacccaagccatgaattatca 99  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||   |||  |||||||||| ||| | ||||||||||||||| || |    
28479 caaacttcttcattatcaacccattttacaaaaccaccaacaacaactcatttctcaccaataaatcatgaattatgaacacccaagccatgaatcatta 28578  T
100 tcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaatt 184  Q
     ||||||||| || || ||| ||||||||||||||| ||| |  ||||  |||||||||||||||||   ||||||||| |||||    
28579 acaacaacatcacttagcaacaacaacatcaattgaacataattcttactacaattcaacaacaacataccataattcaacaatt 28663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 21650 - 21686
Alignment:
1 caaacttcttcattatcaacccattttacaaaaccac 37  Q
    |||||||||||||||||||||||||||||||||||||    
21650 caaacttcttcattatcaacccattttacaaaaccac 21686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 67 - 191
Target Start/End: Complemental strand, 9752 - 9628
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||||||| ||||||||||||||||| |||| | ||| | || || ||| ||||||||| ||||||||||||||||||||||||||| |||||||     
9752 atgaatcatgcatacccaagccatgaattagcatccataacgtcacttaacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaacc 9653  T
167 atgcataattcaccaattgagcata 191  Q
    |||||||| |||| |||||||||||    
9652 atgcataagtcactaattgagcata 9628  T

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Target: scaffold0342 (Bit Score: 69; Significance: 4e-31; HSPs: 2)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 28 - 191
Target Start/End: Complemental strand, 736 - 572
Alignment:
28 acaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaac 126  Q
    |||||||||| ||||| ||| |||||||  ||||||| | || |||||||||||||||||||||| || ||||||||||| ||||   |  |  ||||||    
736 acaaaaccaccaacaataatccatttctcaacaacaaattattaatcatgcaaacccaagccatgtatcatcatcaacaatatgagtaaatatcaacaac 637  T
127 atcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcata 191  Q
    | | |||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||    
636 aaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 83 - 207
Target Start/End: Original strand, 5966 - 6091
Alignment:
83 caagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataa-ttcacca 181  Q
    |||||||||||| |||| |||||| || || || ||| ||||||||||||||| ||||||  |||||||||||||||||| |||  |||||| || ||||    
5966 caagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatgaatattatcacaattcaacaaccacatagcataatttaacca 6065  T
182 attgagcatattttcaacataaacca 207  Q
    ||||||||||||||||||||| ||||    
6066 attgagcatattttcaacatatacca 6091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 67 - 184
Target Start/End: Complemental strand, 10211 - 10094
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||||||| ||||||||||||||||| |||| | ||||| || || ||| ||||||||| ||||||||||||||||||||||||||| |||||||     
10211 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatccattgatcatgaaacttatcacaattcatcaacaacc 10112  T
167 atgcataattcaccaatt 184  Q
    | ||||||||| ||||||    
10111 aagcataattcgccaatt 10094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 67 - 191
Target Start/End: Complemental strand, 186770 - 186647
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||||||| ||||||||||||||||| |||| | ||||| || || ||| ||||||||| |||||||||||||| |||||||| | | |||||||     
186770 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattgatcatgaaacatatcacaa-taatcaacaacc 186672  T
167 atgcataattcaccaattgagcata 191  Q
    |||||||||||||||||||||||||    
186671 atgcataattcaccaattgagcata 186647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 67 - 191
Target Start/End: Complemental strand, 193732 - 193609
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||||||| ||||||||||||||||| |||| | ||||| || || ||| ||||||||| |||||||||||||| |||||||| | | |||||||     
193732 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattgatcatgaaacatatcacaa-taatcaacaacc 193634  T
167 atgcataattcaccaattgagcata 191  Q
    |||||||||||||||||||||||||    
193633 atgcataattcaccaattgagcata 193609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 31 - 133
Target Start/End: Complemental strand, 24471 - 24368
Alignment:
31 aaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatc 129  Q
    ||||||| ||||||||| |||||||  ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||| |    
24471 aaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagacatgaattatcatcaacaacatgacatagcaacaacaacaac 24372  T
130 aatt 133  Q
    ||||    
24371 aatt 24368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 123 - 197
Target Start/End: Original strand, 4351 - 4425
Alignment:
123 caacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagcatattttca 197  Q
    ||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
4351 caacaacaattgatcataaaacttatcacaattcatcaacaacaatgcataattcaccaattgaacatattttca 4425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 108
Target Start/End: Original strand, 4319 - 4358
Alignment:
69 gaatcatgcaaacccaagccatgaattatcatcaacaaca 108  Q
    |||| |||||||||||| ||||||||||||||||||||||    
4319 gaattatgcaaacccaaaccatgaattatcatcaacaaca 4358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 63 - 200
Target Start/End: Original strand, 4569 - 4707
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    ||||||| || ||| | ||||||||||||||| |||| |||||| || || || ||| |||||||||||||||  |||||  ||||||||||| ||||||    
4569 aatcatggattatgaacacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaaaatgaatattatcacaattaaacaac 4668  T
163 aacaatgcataattc-accaattgagcatattttcaaca 200  Q
    ||||  ||||||||| |||||||||||||||||||||||    
4669 aacatagcataattcaaccaattgagcatattttcaaca 4707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 63 - 200
Target Start/End: Original strand, 9183 - 9321
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaac 162  Q
    ||||||| || ||| | ||||||||||||||| |||| |||||| || || || ||| |||||||||||||||  |||||  ||||||||||| ||||||    
9183 aatcatggattatgaacacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaaaatgaatattatcacaattaaacaac 9282  T
163 aacaatgcataattc-accaattgagcatattttcaaca 200  Q
    ||||  ||||||||| |||||||||||||||||||||||    
9283 aacatagcataattcaaccaattgagcatattttcaaca 9321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 23 - 184
Target Start/End: Complemental strand, 77129 - 76967
Alignment:
23 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaa 121  Q
    |||| |||||||||| |||||||| ||||||||   |||||| |||||||| ||| | ||||||||||||||| ||||  ||||| || || || ||| |    
77129 atttcacaaaaccaccaacaacaactcatttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaataacaatatcacttagcaaca 77030  T
122 acaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaatt 184  Q
    |||||||||||||| |||||| || | ||||||||||||||||||  |||||||||| |||||    
77029 acaacatcaattgaacatgaatctcaccacaattcaacaacaacatagcataattcaacaatt 76967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 67 - 191
Target Start/End: Complemental strand, 273 - 149
Alignment:
67 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||||||| || |||||||||||||| |||| | ||||| || || ||| ||||||||  |||||||||||||||||||| |||||| |||  |      
273 atgaatcatgcatactcaagccatgaattagcatccataacatcacttaacaacaacaacatttattgatcatgaaacttatcataattcatcaattatt 174  T
167 atgcataattcaccaattgagcata 191  Q
    |||||||||||||||||||||||||    
173 atgcataattcaccaattgagcata 149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 57; Significance: 6e-24; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 89652 - 89584
Alignment:
121 aacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagca 189  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
89652 aacaacatcaattgttcatgaaacttatcacaatttaacaacaacaaagcataattcaccaattgagca 89584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 130499 - 130634
Alignment:
1 caaacttcttcattatcaacccattttacaaaaccactaacaacaattca-tttcttgacaacaatcatgaatcatgcaaacccaagccatgaattatca 99  Q
    ||||||||||| |||| |||||||||||||||||||| |||||||| ||| |||||  |||||||||||||   ||| | ||||||||||| | | || |    
130499 caaacttcttctttattaacccattttacaaaaccaccaacaacaactcattttctcaacaacaatcatgatatatgaacacccaagccataattcataa 130598  T
100 tcaacaacatgacatatcaaaaacaacatcaattga 135  Q
    ||||||||||  |  | ||| |||||||||||||||    
130599 tcaacaacatatctcaacaacaacaacatcaattga 130634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 191
Target Start/End: Original strand, 79547 - 79674
Alignment:
65 tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaa 164  Q
    |||||||| ||| | ||||||||||||||| |||| ||| || || || || ||| ||||||||||||||| ||||   |  |||| |||||||||||||    
79547 tcatgaattatgaatacccaagccatgaatcatcaacaataatatcacttagcaacaacaacatcaattgaacatggttcacatcataattcaacaacaa 79646  T
165 caatgcataattc-accaattgagcata 191  Q
    ||   |||||||| ||||||| ||||||    
79647 catatcataattcaaccaattaagcata 79674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1272 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 270 - 436
Alignment:
19 acccattttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatc 117  Q
    ||||| ||||||||||||| |||||||| ||||||||   |||||| |||||||| |||   ||||||| ||||||| |||| ||| ||||| || || |    
270 acccagtttacaaaaccaccaacaacaactcatttctcatcaacaaatcatgaattatgagcacccaaggcatgaataatcaacaaaaacatcacttagc 369  T
118 aaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaatt 184  Q
    || ||||||||||||||| |||||  |||| ||||||||||||| ||||  |||||||||| |||||    
370 aacaacaacatcaattgaacatgactcttaccacaattcaacaataacatagcataattcaacaatt 436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0700 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 16 - 178
Target Start/End: Original strand, 2483 - 2646
Alignment:
16 tcaacccattttacaaaaccactaacaacaattcatttcttgacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacat 114  Q
    ||||||||||||| |||||||  |||||||| ||||||||   || | |||||||| | ||| | |||||| |||||||| |||| |||||| || || |    
2483 tcaacccattttagaaaaccaacaacaacaagtcatttctcatcatcaaatcatgatttatgaacacccaaaccatgaatcatcaacaacaatatcactt 2582  T
115 atcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattca 178  Q
    | ||| ||||||||||||||| |||||| || |||| |||||||||||||||  ||||||||||    
2583 agcaacaacaacatcaattgaacatgaatctcatcataattcaacaacaacatagcataattca 2646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 63 - 200
Target Start/End: Original strand, 7177 - 7316
Alignment:
63 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacat-caattgatcatgaaacttatcacaattcaacaa 161  Q
    ||||||| || ||| | ||||||||||||||| |||| |||||| || || || ||| |||||||| |||||||  |||||  ||||||||||| |||||    
7177 aatcatggattatgaacacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatccaattgaaaatgaatattatcacaattaaacaa 7276  T
162 caacaatgcataattc-accaattgagcatattttcaaca 200  Q
    |||||  ||||||||| |||||||||||||||||||||||    
7277 caacatagcataattcaaccaattgagcatattttcaaca 7316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 81 - 184
Target Start/End: Complemental strand, 2539 - 2436
Alignment:
81 cccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcacc 180  Q
    |||||||||||||| |||||||||||||| || ||  || ||||||||||||||| |||||  ||||||| |||||||||||||||  |||||||||| |    
2539 cccaagccatgaatcatcatcaacaacatcacttaggaacaacaacatcaattgaacatgagtcttatcataattcaacaacaacatagcataattcatc 2440  T
181 aatt 184  Q
    ||||    
2439 aatt 2436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 16 - 166
Target Start/End: Original strand, 69415 - 69566
Alignment:
16 tcaacccattttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacat 114  Q
    |||||||||||||||||||||  |||||||  ||| ||||   || ||| |||||| | ||| | ||||||||||||||| |||| |||||| || || |    
69415 tcaacccattttacaaaaccaacaacaacacctcaattctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcactt 69514  T
115 atcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    | ||| ||||||||||||||| |||||| || ||||||||||||||||||||    
69515 agcaacaacaacatcaattgaacatgaatctcatcacaattcaacaacaaca 69566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 23 - 184
Target Start/End: Original strand, 35444 - 35605
Alignment:
23 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaa 121  Q
    ||||||||||||||| |||| ||| ||||||||   |||||| |||||||| ||| | ||||||||||||||| |||| ||||||||| || || ||| |    
35444 attttacaaaaccaccaaca-caactcatttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaacaacaacatcacttagcaaca 35542  T
122 acaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaatt 184  Q
    | |||||||||||| |||||  |||| |||| |||||||||||||  |||||| ||| |||||    
35543 aaaacatcaattgaacatgactcttaccacatttcaacaacaacatagcataaatcaacaatt 35605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 65 - 191
Target Start/End: Original strand, 8018 - 8145
Alignment:
65 tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaa 164  Q
    |||||||| ||| | |||||||| |||||| |||| ||||||||| ||||| ||| ||||||||||||||| ||||   || |||| ||||| |||||||    
8018 tcatgaattatgaatacccaagctatgaatcatcaacaacaacatcacatagcaacaacaacatcaattgaacatggttctcatcataattccacaacaa 8117  T
165 caatgcataattca-ccaattgagcata 191  Q
    ||  |||||||||| |||||||||||||    
8118 catagcataattcacccaattgagcata 8145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 166
Target Start/End: Complemental strand, 44087 - 43936
Alignment:
16 tcaacccattttacaaaaccactaacaacaattcatttcttgacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacat 114  Q
    |||||||||||||||||||||  |||||||| ||||||||   || | |||||||| | ||| | ||||||||||||||| |||| |||||| || || |    
44087 tcaacccattttacaaaaccaacaacaacaactcatttctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcactt 43988  T
115 atcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    | ||| ||||||||||||| | |||||  || |||| |||||||||||||||    
43987 agcaacaacaacatcaattaaacatgattctcatcataattcaacaacaaca 43936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 7815 - 7913
Alignment:
39 aacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgat 136  Q
    |||||||  ||||||||  ||||||| |||||||||||||| ||||||||||||||||| |||| ||||||| || || ||| ||||||||||||||||    
7815 aacaacatctcatttctcaacaacaaatcatgaatcatgcatacccaagccatgaattaacatccacaacatcacttagcaacaacaacatcaattgat 7913  T

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Target: scaffold0483 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 6622 - 6788
Alignment:
19 acccattttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatc 117  Q
    ||||| ||||||||||||| |||||||| ||||||||   |||||| |||||||| |||   ||||||||||||||| |||| ||| ||||| || ||      
6622 acccagtttacaaaaccaccaacaacaactcatttctcatcaacaaatcatgaattatgaccacccaagccatgaatcatcaacaaaaacatcacttagg 6721  T
118 aaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaatt 184  Q
    |  ||||||||||||||| |||||  |||| ||||||||||||| | ||  |||||||||| |||||    
6722 agtaacaacatcaattgaacatgactcttaccacaattcaacaatagcatagcataattcaacaatt 6788  T

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Target: scaffold0006 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 166
Target Start/End: Complemental strand, 197477 - 197391
Alignment:
80 acccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||| |||||||| |||| |||||| || || || ||| ||||||||||||||| |||||| || ||||||||||||||||||||    
197477 acccaaaccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatgaatctcatcacaattcaacaacaaca 197391  T

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Target: scaffold0389 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 165
Target Start/End: Original strand, 10670 - 10770
Alignment:
65 tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaa 164  Q
    |||||||| ||| | ||||||||||||||| |||| ||||||||| || || ||||||||||||||||||| ||||   || |||| ||||| |||||||    
10670 tcatgaattatgaacacccaagccatgaatgatcaacaacaacatcacttagcaaaaacaacatcaattgaacatggttctcatcataattcgacaacaa 10769  T
165 c 165  Q
    |    
10770 c 10770  T

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Target: scaffold0058 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 65 - 191
Target Start/End: Complemental strand, 70545 - 70418
Alignment:
65 tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaa 164  Q
    |||||||| ||| | |||||||||| |||| |||| ||||||||| || || ||| ||||||||||||||| ||||   || |||| |||||||||||||    
70545 tcatgaattatgaatacccaagccaagaatcatcaacaacaacatcacttagcaataacaacatcaattgaacatggtcctcatcataattcaacaacaa 70446  T
165 caatgcataattca-ccaattgagcata 191  Q
     |   ||||||||| |||||||||||||    
70445 tataacataattcacccaattgagcata 70418  T

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Target: scaffold0970 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 166
Target Start/End: Original strand, 2478 - 2564
Alignment:
80 acccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    ||||||||||||||| |||| ||||||||| || || ||| ||||||||||||||| ||||   || |||| |||||||||||||||    
2478 acccaagccatgaatcatcaacaacaacatcacttagcaacaacaacatcaattgaacatggttctcatcataattcaacaacaaca 2564  T

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Target: scaffold0125 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 186
Target Start/End: Original strand, 41658 - 41778
Alignment:
65 tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaa 164  Q
    |||||||| ||||| |||||||| |||| | |||| ||||||||| |  || ||| ||||||||||||||| ||||   || |||| |||||||||||||    
41658 tcatgaat-atgcatacccaagcaatgattcatcaacaacaacatcatttaacaacaacaacatcaattgaacatggttctcatcataattcaacaacaa 41756  T
165 caatgcataattcaccaattga 186  Q
    ||  ||| ||||||||||||||    
41757 catagcaaaattcaccaattga 41778  T

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Target: scaffold0132 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 65 - 189
Target Start/End: Original strand, 13516 - 13639
Alignment:
65 tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaa 164  Q
    |||||||| ||||| ||||||| ||||| | |||| ||||||||| |  || ||| ||||||||||||||| ||||   || |||| |||||||||||||    
13516 tcatgaat-atgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatcataattcaacaacaa 13614  T
165 caatgcataattcaccaattgagca 189  Q
    ||  ||| |||||| ||||||||||    
13615 catagcaaaattcatcaattgagca 13639  T

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Target: scaffold0049 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 202
Target Start/End: Original strand, 20274 - 20317
Alignment:
159 caacaacaatgcataattcaccaattgagcatattttcaacata 202  Q
    ||||||||| |||||||| |||||||||||||||||||||||||    
20274 caacaacaaagcataattaaccaattgagcatattttcaacata 20317  T

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Target: scaffold0010 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 166
Target Start/End: Original strand, 31046 - 31129
Alignment:
83 caagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    |||||||||||| |||| |||||  || || || ||| ||||||||||||||| |||||| || ||||||||||||||| ||||    
31046 caagccatgaatcatcaacaacagtatcacttagcaacaacaacatcaattgaacatgaatctcatcacaattcaacaagaaca 31129  T

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Target: scaffold0162 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 166
Target Start/End: Complemental strand, 7264 - 7163
Alignment:
65 tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaa 164  Q
    |||||||| ||| | || |||||||||||| |||| |||||| || || || ||  ||||||||||||||| |||||  ||||||||||| ||| |||||    
7264 tcatgaattatgaacactcaagccatgaatcatcaacaacaatatcacttagcagcaacaacatcaattgaacatgattcttatcacaatccaataacaa 7165  T
165 ca 166  Q
    ||    
7164 ca 7163  T

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Target: scaffold0521 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 164
Target Start/End: Original strand, 11121 - 11201
Alignment:
84 aagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaa 164  Q
    ||||||||||| || | ||||||||| ||||| ||| ||||||||||||||| ||||   || |||| |||||||||||||    
11121 aagccatgaatcataaacaacaacatcacatagcaacaacaacatcaattgaacatggttctcatcataattcaacaacaa 11201  T

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Target: scaffold1734 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1734
Description:

Target: scaffold1734; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 1364 - 1422
Alignment:
23 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaa 80  Q
    |||| |||||||||| ||||||||| |||||||  ||||||| ||||||||||||||||    
1364 atttcacaaaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaa 1422  T

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Target: scaffold0367 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 197
Target Start/End: Complemental strand, 17542 - 17428
Alignment:
83 caagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaa 182  Q
    |||||||||||| |||| |||||| ||  | || | | ||||||||||||| | |||||  || ||||||||||||||||||||   ||||| ||| |||    
17542 caagccatgaatcatcaacaacaatatctcttaaccacaacaacatcaattaaacatgattctcatcacaattcaacaacaacatgtcataagtcatcaa 17443  T
183 ttgagcatattttca 197  Q
    || |||||| |||||    
17442 ttaagcataatttca 17428  T

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Target: scaffold0231 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 13038 - 12992
Alignment:
1 caaacttcttcattatcaacccatttt-acaaaaccactaacaacaa 46  Q
    ||||||||||||||||||||||||||| |||||||||  ||||||||    
13038 caaacttcttcattatcaacccattttcacaaaaccatcaacaacaa 12992  T

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Target: scaffold0165 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 166
Target Start/End: Original strand, 22022 - 22108
Alignment:
80 acccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 166  Q
    ||||||||  ||||| |||| |||||| ||  | || ||| ||||||||||||| | |||||| || ||||||||||||||||||||    
22022 acccaagctgtgaatcatcaacaacaatatctcttaacaacaacaacatcaattaaacatgaatctcatcacaattcaacaacaaca 22108  T

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Target: scaffold0165; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 184
Target Start/End: Original strand, 29987 - 30091
Alignment:
80 acccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcac 179  Q
    |||||||| |||||| |||| |||||| ||  | || ||| ||||||||||||| | |||||  || ||||||||||||||| ||||  ||| ||||||     
29987 acccaagctatgaatcatcaacaacaatatcgcttaacaacaacaacatcaattaaacatgattctcatcacaattcaacaaaaacatagcacaattcaa 30086  T
180 caatt 184  Q
    |||||    
30087 caatt 30091  T

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Target: scaffold0023 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 197
Target Start/End: Complemental strand, 61455 - 61341
Alignment:
83 caagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaa 182  Q
    |||||||||||| |||| |||||| ||  | || | | ||||||||||||| | |||||  || ||||||||||||||||||||   ||||| ||| |||    
61455 caagccatgaatcatcaacaacaatatctcttaaccacaacaacatcaattaaacatgattctcatcacaattcaacaacaacatgtcataagtcatcaa 61356  T
183 ttgagcatattttca 197  Q
    || |||||| |||||    
61355 ttaagcataatttca 61341  T

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Target: scaffold0670 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0670
Description:

Target: scaffold0670; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 184
Target Start/End: Complemental strand, 7899 - 7795
Alignment:
80 acccaagccatgaattatcatcaacaacatgacatatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcac 179  Q
    |||||||| |||||| |||| |||||| ||  | || ||| ||||||||||||| | |||||  || ||||||| ||||||||||||  ||| ||||||     
7899 acccaagctatgaatcatcaacaacaatatctcttaacaacaacaacatcaattaaacatgattctcatcacaaatcaacaacaacatagcacaattcaa 7800  T
180 caatt 184  Q
    |||||    
7799 caatt 7795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 178
Target Start/End: Original strand, 107967 - 108130
Alignment:
15 atcaacccatttt-acaaaaccactaacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgaca 113  Q
    ||||||||||||| | |||||||  |||||||| | ||||||   ||| | |||||| | ||| | |||||||| |||||| |||| |||||| ||  |     
107967 atcaacccatttttaaaaaaccaacaacaacaacttatttctcatcaaaattcatgatttatgaacacccaagctatgaatcatcaacaacaatatatct 108066  T
114 tatcaaaaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattca 178  Q
    || ||| ||||||||||||| | |||||   | ||||||||||||||| ||||| ||||||||||    
108067 taacaacaacaacatcaattaaacatgatcttcatcacaattcaacaataacaa-gcataattca 108130  T

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Target: scaffold0018 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 51380 - 51312
Alignment:
121 aacaacatcaattgatcatgaaacttatcacaattcaacaacaacaatgcataattcaccaattgagca 189  Q
    ||||||||||||| | |||||  || ||||||||||| |||| |||   ||||||||||||||||||||    
51380 aacaacatcaattaaacatgattctcatcacaattcatcaaccacataacataattcaccaattgagca 51312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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