View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15529_low_7 (Length: 270)
Name: NF15529_low_7
Description: NF15529
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15529_low_7 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 82 - 270
Target Start/End: Complemental strand, 43031961 - 43031773
Alignment:
| Q |
82 |
cgtaatgaaaattacatttccgatcttctcaaacgcgccactcctcttcccacgataggcaaaatcgaagaagtacaagaacacgatgaaacctatttgg |
181 |
Q |
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| T |
43031961 |
cgtaatgaaaattacatttccgatcttctcaaacgcgccactcctcttcccacgataggcaaaatcgaagaagtacaagaacacgatgaaacctatttgg |
43031862 |
T |
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| Q |
182 |
gatatgatagatggcttccaactccacctaaagttgttaagcctcgttctgtttttaatgccgctaccttagcttatattggtgattgc |
270 |
Q |
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| T |
43031861 |
gatatgatagatggcttccaactccacctaaagttgttaagcctcgttctgtttttaatgccgctaccttagcttatattggtgattgc |
43031773 |
T |
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