View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1553-Insertion-12 (Length: 552)
Name: NF1553-Insertion-12
Description: NF1553
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1553-Insertion-12 |
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Alignment Details
Target: chr1 (Bit Score: 448; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 448; E-Value: 0
Query Start/End: Original strand, 8 - 519
Target Start/End: Original strand, 4065165 - 4065675
Alignment:
| Q |
8 |
ctttctaaatcatataaagggacatattttatcaacaccccttctaagttggtggtgatagcatgttaaacaagtgcatgcatgagccaaataattcgag |
107 |
Q |
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| T |
4065165 |
ctttctacatcatataaagggacatattttatcaacaccccttctaagttggtggtgatagcatgttaaacaagtgcatgcatgagccaaataattcgag |
4065264 |
T |
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| Q |
108 |
taatcaacagagtaaagctaagccctaaattctgttcacatttattttgcagatgtacaatatttctactaaacagttttcttcctttaaccctagcagg |
207 |
Q |
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| T |
4065265 |
taatcaacagagtaaagctaagccctaaattctattcacatttattttgcagatgtgcaatatttctactaaacagttttcttcctgtaaccctagcagg |
4065364 |
T |
|
| Q |
208 |
caaaactacaatctagcttgaggatgcgatcaatgcaactaatttgagttgcaaatcgaagacctaaaactgctcccatgaattcggcaactaatttgta |
307 |
Q |
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| T |
4065365 |
caaaactacaatctagcttgaggatgcgatcaatgcaactaatttgagttgcaaatcgaagacctaaaactgctcccataaattcagcaactaatttgta |
4065464 |
T |
|
| Q |
308 |
aggtgaaaaatatcattcttgataaactcattcctaactttgtctcaagataatgtgagacttgaatttttcctcataaaaataaaacatattttgaatt |
407 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||| ||||||||| |
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| T |
4065465 |
aggtgaaaaatatcattcttgataaactcattcctaactttgtctcaagacaatgtgagactttagtttttcctcataaaaataaaacatgttttgaatt |
4065564 |
T |
|
| Q |
408 |
aataaacatgcctattaggaaacttgttggagatacaaatcaagacaatctacggctttaaagttacaataaagaagaaaaatcttactttgagaaacaa |
507 |
Q |
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| T |
4065565 |
aataaacatgcctattaggaaacttgttgatgatacaaatcaagactctctacggctttaaagttacaataaagaag-aaaatcttactttgagaaacaa |
4065663 |
T |
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| Q |
508 |
catgttgtcaag |
519 |
Q |
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| T |
4065664 |
catgttgtcaag |
4065675 |
T |
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