View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15531_high_14 (Length: 291)
Name: NF15531_high_14
Description: NF15531
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15531_high_14 |
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Alignment Details
Target: chr7 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 14 - 273
Target Start/End: Complemental strand, 24656484 - 24656228
Alignment:
| Q |
14 |
atgaatacaattattttgaagatcttcatcccaacatgaaagtcaaacctaattaggctatgtgtatgctacaaaatctctgtcacattaaaattctcat |
113 |
Q |
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| T |
24656484 |
atgaatacaattattttgaagatcttcatgccaacatgaaagtcaaacctaa---ggctatgtctattctacaaaatctctgtcacattaaaactctcat |
24656388 |
T |
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| Q |
114 |
cacaaatagaacaacaatttctacctctaatagaatgtttaatcccttgattaaacatgccaagattttttctatcttctctctaatcacattatctacc |
213 |
Q |
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||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24656387 |
cacaaatagaacaacaacttcttcctctaataaaatgtttaatcccttgattaaacatgccaagattttttctatcttctctctaatcacattatctacc |
24656288 |
T |
|
| Q |
214 |
atattttttctcatacaaggtgatcatgttatctaccatgattcccttatactccatgct |
273 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
24656287 |
atattttttctcatacaaggtgatcatgttatctatcatgattcccttatactccatgct |
24656228 |
T |
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