View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15531_high_18 (Length: 250)
Name: NF15531_high_18
Description: NF15531
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15531_high_18 |
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Alignment Details
Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 26578449 - 26578690
Alignment:
| Q |
1 |
tcgttgtgtttgagggtcttgcctccaagatagctttacccttgttcttgtccaattaaannnnnnnattgtgtactaaggaaccaatgaagttaccaga |
100 |
Q |
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| T |
26578449 |
tcgttgtgtttgagggtcttgcctccaagatagctttacctttgttcttgtccaattaattttttttattgtgtactaaggaaccaatgaagttaccaga |
26578548 |
T |
|
| Q |
101 |
tgatactccaaatgtgcatttaactggattcatctttaaaccatatagcctcatactttttgaaagttttctctagttccaacaaatggttttggaaggg |
200 |
Q |
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||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
26578549 |
tgatactccaaatatgcatttagctggattcatctttaaaccatatagcctcatagtttttgaaagtcttctctagttccaacaaatggttttggaaggg |
26578648 |
T |
|
| Q |
201 |
aatgtatttgaccattacatcatcaatatacacattcatctc |
242 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
26578649 |
aatgtatttgaccattacatcatcaatatacacattcatctc |
26578690 |
T |
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