View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15531_high_19 (Length: 249)
Name: NF15531_high_19
Description: NF15531
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15531_high_19 |
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Alignment Details
Target: chr4 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 13 - 232
Target Start/End: Complemental strand, 37025016 - 37024796
Alignment:
| Q |
13 |
ataattctatcactaatattaataacacatgcatctagttag----atagctggtgcatgtgccacaccttaattagcggggggacccttagtttcctat |
108 |
Q |
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| T |
37025016 |
ataattctatcactaatattaataacacatgcatctagttagttagatagctggtgcatgtgccacaccttaattagcggggggacccttagtttcctat |
37024917 |
T |
|
| Q |
109 |
taacttcttcttccatacgattacaactttagaatataccaccaatgttcatattttctattccatttctttcacaataatgacccttgaggaagctgat |
208 |
Q |
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|||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
37024916 |
taacttcttc---catacgattactactttagaatataccaccaatgttcatattttctattccatttctttcacaataacgacccttgaggaagctgat |
37024820 |
T |
|
| Q |
209 |
gcatagtctcttccatgcctcctt |
232 |
Q |
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|||||||||||||||||||||||| |
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| T |
37024819 |
gcatagtctcttccatgcctcctt |
37024796 |
T |
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