View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15531_high_21 (Length: 240)
Name: NF15531_high_21
Description: NF15531
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15531_high_21 |
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Alignment Details
Target: chr7 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 11 - 224
Target Start/End: Complemental strand, 30280145 - 30279932
Alignment:
| Q |
11 |
cataggaatttggattagctataagtttgagccacacacgcttcatcaattggaagaaaggaagcctactacttgtatattctactatgttatttgcttc |
110 |
Q |
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| T |
30280145 |
cataggaatttggatttgctataagtttgagccacacacgcttcatcaattgtaagaaaggaagcctactacttgtatattctactatgttatttgcttc |
30280046 |
T |
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| Q |
111 |
aacatctttactttcttcaccttcacatgtcacattactaatgctactagccttcggtttcaaagtggttatagtcccctctattcccgttcttctaaac |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30280045 |
aacatctttactttcttcaccttcacatgtcacattactaatgctactagccttcggtttcaaagtggttatagtcccctctattcccgttcttctaaac |
30279946 |
T |
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| Q |
211 |
tccaacacaaatag |
224 |
Q |
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|||||||||||||| |
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| T |
30279945 |
tccaacacaaatag |
30279932 |
T |
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