View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15531_high_26 (Length: 221)

Name: NF15531_high_26
Description: NF15531
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15531_high_26
NF15531_high_26
[»] chr6 (40 HSPs)
chr6 (1-206)||(32959774-32959985)
chr6 (95-197)||(8320767-8320875)
chr6 (21-203)||(9402522-9402710)
chr6 (21-167)||(13769005-13769152)
chr6 (95-170)||(28079701-28079776)
chr6 (51-166)||(256501-256617)
chr6 (95-208)||(14410817-14410935)
chr6 (47-170)||(20349023-20349147)
chr6 (95-195)||(29199859-29199965)
chr6 (71-169)||(32853827-32853926)
chr6 (96-206)||(7393850-7393966)
chr6 (96-169)||(32532549-32532622)
chr6 (71-169)||(12141368-12141467)
chr6 (71-169)||(12309555-12309654)
chr6 (47-169)||(34346011-34346134)
chr6 (95-169)||(2367334-2367408)
chr6 (95-169)||(5863389-5863463)
chr6 (71-169)||(27738755-27738854)
chr6 (95-169)||(3483929-3484003)
chr6 (71-196)||(24602829-24602961)
chr6 (96-196)||(14506095-14506201)
chr6 (103-170)||(20610987-20611054)
chr6 (98-153)||(24225709-24225764)
chr6 (95-150)||(27534692-27534747)
chr6 (106-169)||(34178335-34178398)
chr6 (98-156)||(9442441-9442499)
chr6 (95-169)||(10142524-10142598)
chr6 (71-156)||(11762428-11762514)
chr6 (95-169)||(32053096-32053170)
chr6 (95-164)||(9458671-9458740)
chr6 (47-83)||(1947884-1947920)
chr6 (95-155)||(10925463-10925523)
chr6 (163-203)||(30816352-30816392)
chr6 (95-166)||(12678103-12678174)
chr6 (99-169)||(15498336-15498406)
chr6 (163-196)||(27534778-27534811)
chr6 (163-203)||(3483877-3483917)
chr6 (163-203)||(5863337-5863377)
chr6 (163-203)||(10188034-10188074)
chr6 (163-203)||(32053176-32053216)
[»] chr3 (48 HSPs)
chr3 (21-156)||(30904835-30904970)
chr3 (95-169)||(44639282-44639356)
chr3 (96-169)||(7469784-7469857)
chr3 (46-170)||(42243345-42243470)
chr3 (95-166)||(23580835-23580906)
chr3 (71-169)||(44172609-44172708)
chr3 (71-169)||(44179309-44179408)
chr3 (95-166)||(48305650-48305721)
chr3 (95-169)||(23546948-23547022)
chr3 (95-169)||(48390823-48390897)
chr3 (92-156)||(3385875-3385939)
chr3 (95-170)||(4016049-4016124)
chr3 (95-170)||(4557310-4557385)
chr3 (95-170)||(10043287-10043362)
chr3 (95-170)||(42758382-42758457)
chr3 (71-169)||(49580047-49580146)
chr3 (96-166)||(22535850-22535920)
chr3 (95-169)||(34025962-34026036)
chr3 (95-169)||(39655279-39655353)
chr3 (72-169)||(44953441-44953539)
chr3 (95-153)||(52198163-52198221)
chr3 (96-166)||(53631913-53631983)
chr3 (96-153)||(17146172-17146229)
chr3 (96-169)||(23154071-23154143)
chr3 (96-169)||(29842317-29842389)
chr3 (71-167)||(44106800-44106897)
chr3 (61-156)||(4553163-4553259)
chr3 (95-150)||(29284344-29284399)
chr3 (95-170)||(30616286-30616361)
chr3 (95-166)||(34154422-34154493)
chr3 (95-169)||(44252755-44252829)
chr3 (72-156)||(34119640-34119725)
chr3 (96-153)||(52572618-52572675)
chr3 (163-203)||(39655227-39655267)
chr3 (98-166)||(54317155-54317223)
chr3 (71-153)||(39728654-39728737)
chr3 (163-206)||(44252841-44252884)
chr3 (163-208)||(831096-831141)
chr3 (163-196)||(34154508-34154541)
chr3 (163-196)||(39728765-39728798)
chr3 (163-196)||(48390778-48390811)
chr3 (163-203)||(7469732-7469772)
chr3 (163-203)||(10371227-10371267)
chr3 (163-203)||(29858529-29858569)
chr3 (163-203)||(34119750-34119790)
chr3 (163-203)||(42758468-42758508)
chr3 (163-203)||(44953389-44953429)
chr3 (114-170)||(49025707-49025763)
[»] chr8 (45 HSPs)
chr8 (21-170)||(8545354-8545504)
chr8 (95-203)||(17469263-17469377)
chr8 (21-156)||(29918540-29918676)
chr8 (63-166)||(45236040-45236144)
chr8 (71-169)||(27932396-27932495)
chr8 (46-170)||(14155490-14155615)
chr8 (21-156)||(30903979-30904115)
chr8 (56-170)||(9642356-9642471)
chr8 (63-206)||(14186295-14186445)
chr8 (95-169)||(24927957-24928031)
chr8 (47-152)||(28345450-28345556)
chr8 (95-169)||(32303069-32303143)
chr8 (21-82)||(6388599-6388660)
chr8 (95-168)||(15068595-15068667)
chr8 (86-203)||(36131883-36132007)
chr8 (67-170)||(14687378-14687482)
chr8 (22-170)||(17084112-17084263)
chr8 (98-170)||(20399603-20399675)
chr8 (86-172)||(43113629-43113716)
chr8 (47-156)||(5700315-5700425)
chr8 (92-170)||(10297463-10297541)
chr8 (71-166)||(24870033-24870129)
chr8 (71-166)||(40248380-40248476)
chr8 (86-156)||(24568936-24569007)
chr8 (71-153)||(34777049-34777132)
chr8 (95-169)||(1063515-1063589)
chr8 (95-169)||(29108828-29108902)
chr8 (95-169)||(39445582-39445656)
chr8 (95-144)||(2075866-2075915)
chr8 (95-156)||(27777217-27777278)
chr8 (95-170)||(1012627-1012701)
chr8 (95-170)||(30481426-30481501)
chr8 (95-170)||(37960967-37961042)
chr8 (95-170)||(40789597-40789672)
chr8 (47-156)||(9476032-9476142)
chr8 (21-170)||(12468224-12468373)
chr8 (163-196)||(5858613-5858646)
chr8 (163-203)||(2075788-2075828)
chr8 (163-203)||(24569032-24569071)
chr8 (163-203)||(24928043-24928083)
chr8 (163-203)||(27932507-27932547)
chr8 (163-203)||(29108776-29108816)
chr8 (163-203)||(30481375-30481415)
chr8 (163-203)||(32303155-32303195)
chr8 (106-170)||(35215555-35215618)
[»] chr1 (46 HSPs)
chr1 (21-170)||(48125688-48125838)
chr1 (21-170)||(39219192-39219342)
chr1 (46-170)||(13798197-13798322)
chr1 (71-169)||(24236767-24236866)
chr1 (95-196)||(10450038-10450139)
chr1 (92-169)||(23490777-23490854)
chr1 (96-156)||(10778586-10778646)
chr1 (97-169)||(16408953-16409025)
chr1 (96-167)||(3627993-3628064)
chr1 (71-169)||(29936400-29936499)
chr1 (95-170)||(34673287-34673362)
chr1 (95-169)||(36187226-36187300)
chr1 (95-169)||(50426667-50426741)
chr1 (96-169)||(19572518-19572591)
chr1 (95-150)||(28297943-28297998)
chr1 (95-170)||(44615480-44615555)
chr1 (95-170)||(44793014-44793089)
chr1 (95-166)||(49250782-49250853)
chr1 (95-169)||(5181048-5181122)
chr1 (95-165)||(9982900-9982970)
chr1 (95-169)||(17134956-17135030)
chr1 (72-156)||(12494995-12495080)
chr1 (95-156)||(23058475-23058536)
chr1 (95-170)||(16237309-16237384)
chr1 (95-170)||(34085244-34085319)
chr1 (95-196)||(16433140-16433244)
chr1 (95-169)||(18354086-18354160)
chr1 (100-168)||(19003673-19003741)
chr1 (163-203)||(20774661-20774701)
chr1 (163-203)||(23968674-23968714)
chr1 (97-153)||(42439692-42439748)
chr1 (163-206)||(16409037-16409080)
chr1 (114-169)||(24710875-24710930)
chr1 (21-151)||(41476976-41477107)
chr1 (71-153)||(51421842-51421925)
chr1 (47-156)||(8880408-8880518)
chr1 (95-157)||(16903532-16903594)
chr1 (51-156)||(25154846-25154952)
chr1 (116-170)||(33293536-33293590)
chr1 (96-166)||(35069898-35069968)
chr1 (100-170)||(35936834-35936904)
chr1 (95-156)||(34060044-34060105)
chr1 (95-156)||(42707856-42707916)
chr1 (163-203)||(19572466-19572506)
chr1 (96-132)||(23966883-23966919)
chr1 (71-170)||(29871290-29871390)
[»] chr4 (64 HSPs)
chr4 (21-156)||(21956834-21956969)
chr4 (47-170)||(25298839-25298963)
chr4 (26-170)||(25941082-25941227)
chr4 (64-170)||(19883062-19883169)
chr4 (95-170)||(29527826-29527901)
chr4 (21-151)||(33516097-33516228)
chr4 (95-170)||(47103752-47103827)
chr4 (95-169)||(48459495-48459569)
chr4 (95-170)||(1724316-1724391)
chr4 (103-170)||(37107433-37107499)
chr4 (95-169)||(5902621-5902695)
chr4 (95-153)||(6382295-6382353)
chr4 (95-169)||(7608984-7609058)
chr4 (95-169)||(11028087-11028161)
chr4 (47-156)||(36306750-36306860)
chr4 (21-154)||(42907826-42907959)
chr4 (95-169)||(44317549-44317623)
chr4 (95-156)||(30266350-30266411)
chr4 (95-156)||(30285777-30285838)
chr4 (71-166)||(47550363-47550459)
chr4 (95-170)||(6482041-6482116)
chr4 (72-150)||(11122895-11122974)
chr4 (95-170)||(14605931-14606006)
chr4 (95-170)||(31782627-31782702)
chr4 (21-170)||(35304522-35304672)
chr4 (95-169)||(1866556-1866630)
chr4 (47-156)||(8843825-8843934)
chr4 (47-156)||(8856789-8856898)
chr4 (72-169)||(21423851-21423949)
chr4 (72-169)||(55826630-55826728)
chr4 (95-168)||(3737790-3737863)
chr4 (95-156)||(21544593-21544654)
chr4 (95-156)||(26564845-26564906)
chr4 (95-156)||(32585503-32585564)
chr4 (59-166)||(9929177-9929285)
chr4 (95-170)||(12825467-12825542)
chr4 (95-166)||(15987272-15987343)
chr4 (103-150)||(43893250-43893297)
chr4 (163-206)||(44317635-44317678)
chr4 (47-167)||(10302048-10302170)
chr4 (13-83)||(21714069-21714139)
chr4 (95-169)||(31752470-31752544)
chr4 (95-169)||(39046966-39047040)
chr4 (115-168)||(32596192-32596245)
chr4 (95-156)||(47239405-47239466)
chr4 (95-208)||(10574381-10574500)
chr4 (58-156)||(16575088-16575187)
chr4 (21-108)||(30034613-30034700)
chr4 (47-82)||(33616210-33616245)
chr4 (102-156)||(15733546-15733600)
chr4 (95-169)||(31918565-31918639)
chr4 (99-156)||(31415951-31416008)
chr4 (163-196)||(39086257-39086290)
chr4 (21-82)||(40420680-40420741)
chr4 (96-165)||(42299805-42299872)
chr4 (114-166)||(3505301-3505353)
chr4 (96-156)||(4741236-4741296)
chr4 (163-203)||(31918513-31918553)
chr4 (95-135)||(37349137-37349177)
chr4 (47-166)||(37384238-37384357)
chr4 (106-170)||(39375303-39375367)
chr4 (118-170)||(41915002-41915054)
chr4 (118-170)||(43309520-43309572)
chr4 (163-203)||(43893327-43893367)
[»] chr7 (63 HSPs)
chr7 (17-135)||(3774003-3774122)
chr7 (26-167)||(3157026-3157168)
chr7 (95-169)||(10072479-10072553)
chr7 (71-166)||(30650619-30650715)
chr7 (95-156)||(32546205-32546266)
chr7 (98-203)||(24425396-24425507)
chr7 (95-170)||(18825877-18825952)
chr7 (95-194)||(26622964-26623069)
chr7 (96-169)||(3226952-3227025)
chr7 (95-168)||(18683987-18684060)
chr7 (21-165)||(29292640-29292787)
chr7 (95-170)||(5377098-5377173)
chr7 (71-169)||(16866157-16866256)
chr7 (71-169)||(27850332-27850431)
chr7 (95-170)||(28309505-28309580)
chr7 (71-169)||(38152875-38152974)
chr7 (71-169)||(41103644-41103743)
chr7 (95-169)||(21702672-21702746)
chr7 (95-169)||(45380120-45380194)
chr7 (95-167)||(12980390-12980462)
chr7 (101-169)||(39456021-39456089)
chr7 (71-166)||(45885774-45885870)
chr7 (95-170)||(3920551-3920626)
chr7 (95-170)||(31426021-31426096)
chr7 (95-169)||(35074483-35074557)
chr7 (72-169)||(38139798-38139896)
chr7 (71-156)||(44734376-44734462)
chr7 (21-206)||(43550380-43550571)
chr7 (59-170)||(4101518-4101630)
chr7 (95-170)||(10995839-10995914)
chr7 (95-150)||(18125253-18125308)
chr7 (95-170)||(22973401-22973476)
chr7 (95-170)||(27896480-27896555)
chr7 (95-169)||(7780021-7780095)
chr7 (107-165)||(10990871-10990929)
chr7 (95-169)||(17885478-17885552)
chr7 (95-169)||(25905642-25905715)
chr7 (95-169)||(43507458-43507532)
chr7 (95-153)||(45708887-45708945)
chr7 (93-170)||(26004479-26004556)
chr7 (95-167)||(27063347-27063419)
chr7 (118-170)||(42908046-42908098)
chr7 (163-203)||(44985872-44985912)
chr7 (95-170)||(2630579-2630653)
chr7 (95-170)||(5565312-5565387)
chr7 (95-170)||(16079026-16079101)
chr7 (95-149)||(17851867-17851921)
chr7 (113-167)||(26874355-26874409)
chr7 (96-166)||(33841092-33841162)
chr7 (66-156)||(37217986-37218079)
chr7 (71-156)||(39316983-39317069)
chr7 (96-170)||(44845140-44845214)
chr7 (163-196)||(7780107-7780140)
chr7 (95-156)||(27063151-27063212)
chr7 (96-169)||(48327459-48327532)
chr7 (138-170)||(3909278-3909310)
chr7 (163-203)||(16866268-16866308)
chr7 (163-203)||(17885564-17885604)
chr7 (163-203)||(18825820-18825860)
chr7 (163-203)||(21702758-21702798)
chr7 (163-203)||(30650730-30650770)
chr7 (163-203)||(38139746-38139786)
chr7 (97-169)||(41741456-41741527)
[»] chr5 (42 HSPs)
chr5 (71-169)||(4920809-4920908)
chr5 (17-135)||(7350448-7350567)
chr5 (21-170)||(6810091-6810241)
chr5 (22-166)||(8020549-8020694)
chr5 (17-156)||(16311313-16311452)
chr5 (95-170)||(28569027-28569102)
chr5 (63-170)||(38006475-38006583)
chr5 (47-170)||(38972881-38973005)
chr5 (92-167)||(23045000-23045075)
chr5 (95-169)||(4583127-4583201)
chr5 (17-170)||(40187663-40187816)
chr5 (21-156)||(27900421-27900557)
chr5 (21-156)||(29664904-29665040)
chr5 (47-170)||(32574944-32575068)
chr5 (95-170)||(2681224-2681299)
chr5 (95-170)||(10822532-10822607)
chr5 (95-169)||(15890215-15890288)
chr5 (95-169)||(20973503-20973577)
chr5 (71-135)||(6092559-6092624)
chr5 (71-208)||(35193951-35194095)
chr5 (163-203)||(17853248-17853288)
chr5 (163-203)||(33727956-33727996)
chr5 (95-170)||(12712563-12712638)
chr5 (63-169)||(12834581-12834688)
chr5 (96-170)||(12773827-12773901)
chr5 (71-170)||(6155926-6156024)
chr5 (95-156)||(12866571-12866632)
chr5 (96-169)||(40517815-40517888)
chr5 (10-82)||(457467-457539)
chr5 (163-203)||(4583213-4583253)
chr5 (95-135)||(18116547-18116587)
chr5 (96-156)||(35311831-35311891)
chr5 (95-135)||(43523767-43523807)
chr5 (99-150)||(13402030-13402081)
chr5 (106-153)||(33728024-33728071)
chr5 (71-153)||(42987502-42987585)
chr5 (95-169)||(17853300-17853373)
chr5 (95-165)||(28045664-28045732)
chr5 (56-156)||(17153137-17153238)
chr5 (163-203)||(5908643-5908683)
chr5 (71-150)||(5908714-5908794)
chr5 (163-203)||(16311248-16311288)
[»] scaffold0244 (1 HSPs)
scaffold0244 (47-167)||(4589-4709)
[»] scaffold0036 (1 HSPs)
scaffold0036 (95-170)||(33401-33476)
[»] chr2 (41 HSPs)
chr2 (21-151)||(25210311-25210442)
chr2 (95-169)||(37106701-37106775)
chr2 (72-170)||(35248390-35248489)
chr2 (96-203)||(6027855-6027968)
chr2 (95-169)||(9632395-9632469)
chr2 (95-169)||(30846955-30847029)
chr2 (95-167)||(24414140-24414212)
chr2 (97-156)||(3547177-3547236)
chr2 (95-170)||(6164478-6164553)
chr2 (71-153)||(8915959-8916042)
chr2 (95-166)||(13705370-13705441)
chr2 (95-166)||(38342528-38342599)
chr2 (13-142)||(11958941-11959071)
chr2 (50-166)||(35965298-35965414)
chr2 (21-132)||(13531883-13531995)
chr2 (95-170)||(30978936-30979009)
chr2 (163-203)||(36128060-36128100)
chr2 (71-169)||(37999467-37999566)
chr2 (95-166)||(43371562-43371633)
chr2 (95-169)||(7314654-7314728)
chr2 (95-169)||(14331536-14331610)
chr2 (95-165)||(37472769-37472839)
chr2 (96-169)||(10208436-10208509)
chr2 (95-156)||(18485657-18485718)
chr2 (86-170)||(35510448-35510533)
chr2 (62-166)||(45256798-45256903)
chr2 (71-122)||(10920629-10920681)
chr2 (163-203)||(24414086-24414126)
chr2 (102-170)||(34458838-34458906)
chr2 (96-152)||(42798011-42798067)
chr2 (95-170)||(15546753-15546828)
chr2 (95-170)||(22900803-22900878)
chr2 (26-156)||(30696863-30696994)
chr2 (95-150)||(36128131-36128186)
chr2 (97-156)||(45115569-45115628)
chr2 (47-112)||(29656798-29656864)
chr2 (163-196)||(7314609-7314642)
chr2 (96-153)||(13830746-13830802)
chr2 (163-203)||(30847041-30847081)
chr2 (163-203)||(44746063-44746103)
chr2 (63-170)||(44746114-44746222)
[»] scaffold0013 (2 HSPs)
scaffold0013 (95-170)||(128126-128201)
scaffold0013 (95-146)||(105498-105549)
[»] scaffold0005 (1 HSPs)
scaffold0005 (95-170)||(211372-211447)
[»] scaffold0184 (1 HSPs)
scaffold0184 (96-170)||(2978-3052)
[»] scaffold0022 (2 HSPs)
scaffold0022 (71-169)||(90580-90679)
scaffold0022 (163-196)||(90685-90718)
[»] scaffold0015 (1 HSPs)
scaffold0015 (95-170)||(55903-55977)
[»] scaffold1322 (1 HSPs)
scaffold1322 (47-96)||(1070-1119)
[»] scaffold0264 (1 HSPs)
scaffold0264 (100-156)||(17474-17530)
[»] scaffold0198 (1 HSPs)
scaffold0198 (61-156)||(20758-20854)


Alignment Details
Target: chr6 (Bit Score: 181; Significance: 6e-98; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 32959774 - 32959985
Alignment:
Q  1 ggaccgatactctgtaagtaaaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttggtatg 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32959774 ggaccgatactatgtaagtaaaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttggtatg 32959873  T
Q  101 ggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattaggga------aaacccaatcaaaacggggaaaatccgtcaaa 194  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      |||||||||||||||| |||||||||||||||    
T  32959874 ggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaaacccaatcaaaacgaggaaaatccgtcaaa 32959973  T
Q  195 ttaggtttgatt 206  Q
    ||||||||||||    
T  32959974 ttaggtttgatt 32959985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 95 - 197
Target Start/End: Complemental strand, 8320875 - 8320767
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa------tcaaaacggggaaaatcc 188  Q
    |||||||||||||||| |||| ||||||||| |||||| |||||||||||||||||||||||| ||||||||||||      ||||| ||||||||||||    
T  8320875 ggtatgggttcggggtcgatatctatatccctgttacctgttccgtacccgtgttttgaaattggggaaaacccaaacctagtcaaagcggggaaaatcc 8320776  T
Q  189 gtcaaatta 197  Q
    |||||||||    
T  8320775 gtcaaatta 8320767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 203
Target Start/End: Original strand, 9402522 - 9402710
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttg-gtatgggttcggggtggataccta 119  Q
    |||| |||||||||||||||| ||  ||||||||  |||||| |||||||||||||||||||   ||| | |||| |||||||||| ||||||| |||||    
T  9402522 aaatgatttagggtttgggtttctatttatataaatggggtactaaattgattttctacattcgagacaggtttgagtatgggttc-gggtggacaccta 9402620  T
Q  120 tatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa------tcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    |||||  ||||||||| | |||||| |||||||||||  ||||||||||||      ||||| |||||||||||| ||||||| ||||||    
T  9402621 tatccatgttacccgtcctgtacccatgttttgaaatcggggaaaacccaaatccagtcaaagcggggaaaatccatcaaattgggtttg 9402710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 21 - 167
Target Start/End: Original strand, 13769005 - 13769152
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggataccta 119  Q
    |||||||||| |||||| ||| |   |||||||| ||| ||||||||||||||||||||||| | ||||| ||||| ||||||||| |||||| ||||||    
T  13769005 aaataatttatggtttgagtttcaatttatataaaaggagtaataaattgattttctacattcaggacgggtttggatatgggttctgggtgggtaccta 13769104  T
Q  120 tatccccgttacccgttccgtacccgtgttttgaaattagggaaaacc 167  Q
    |||  ||||||||||| || ||||| ||||||||| |  |||||||||    
T  13769105 tatgtccgttacccgtcccatacccatgttttgaagtcggggaaaacc 13769152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 28079776 - 28079701
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||  ||||||||||||    
T  28079776 ggtatgggttcggggtgggtacctatatccccgttacccgtcccgtacccatgttttgaaatcggggaaaacccaa 28079701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 51 - 166
Target Start/End: Complemental strand, 256617 - 256501
Alignment:
Q  51 ataataggggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgtt 149  Q
    |||| ||||||| ||||||||||||||||||||| || || ||||| |||||||| ||||||| ||||||||| ||| ||||||||  ||||||| ||||    
T  256617 ataaaaggggtagtaaattgattttctacatttaggaggggtttgggtatgggtttggggtgggtacctatatgcccattacccgtctcgtacccatgtt 256518  T
Q  150 ttgaaattagggaaaac 166  Q
    |||||||  ||||||||    
T  256517 ttgaaatcggggaaaac 256501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 95 - 208
Target Start/End: Complemental strand, 14410935 - 14410817
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa------tcaaaacggggaaaatcc 188  Q
    |||||||||||||||||| ||||||||| |||||||||||| || |||||||||||||||||  |||||||| |||      ||||||| ||||||||||    
T  14410935 ggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatctgggaaaactcaaacctagtcaaaac-gggaaaatcc 14410837  T
Q  189 gtcaaattaggtttgatttg 208  Q
    |||||||||| |||| ||||    
T  14410836 gtcaaattagatttggtttg 14410817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 47 - 170
Target Start/End: Original strand, 20349023 - 20349147
Alignment:
Q  47 ttatataataggggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccg 145  Q
    |||||||| | | |||||||||| ||||| |||||||   |||||||||| |||| ||||||||||| |||||||||||||||||| ||| || ||||||    
T  20349023 ttatataaaaagtgtaataaattaattttttacatttgcaacggatttgggtatgagttcggggtgggtacctatatccccgttactcgtcccatacccg 20349122  T
Q  146 tgttttgaaattagggaaaacccaa 170  Q
    |||||||||||  ||||||| ||||    
T  20349123 tgttttgaaatcggggaaaatccaa 20349147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 95 - 195
Target Start/End: Complemental strand, 29199965 - 29199859
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattaggga------aaacccaatcaaaacggggaaaatcc 188  Q
    |||||||||||||||| ||||| |||||||| ||||||||| |||||||||| |||||||||  ||||      ||||||||||||| ||||||||||||    
T  29199965 ggtatgggttcggggtagatacatatatccctgttacccgtcccgtacccgtattttgaaatcggggaaaatccaaacccaatcaaatcggggaaaatcc 29199866  T
Q  189 gtcaaat 195  Q
    |||||||    
T  29199865 gtcaaat 29199859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 32853827 - 32853926
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||| |||||||  ||||| ||||| |||||||||||||||| ||||||||| |||||||||||| || |||||||||||||| ||  |||||||||||    
T  32853827 attttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaaccca 32853926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 206
Target Start/End: Complemental strand, 7393966 - 7393850
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattaggga------aaacccaatcaaaacggggaaaatccg 189  Q
    ||||||||||||||||||||||||||| ||| ||| ||||  | ||| |||||||||||||  ||||      |||||||||||||| ||||||||||||    
T  7393966 gtatgggttcggggtggatacctatatacccattatccgtctcttactcgtgttttgaaatcggggaaaatccaaacccaatcaaaatggggaaaatccg 7393867  T
Q  190 tcaaattaggtttgatt 206  Q
    ||||||| | |||||||    
T  7393866 tcaaattggatttgatt 7393850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 169
Target Start/End: Original strand, 32532549 - 32532622
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||||||||||||| ||||||||| ||| |||||||| || |||||||||||||||||  |||||||||||    
T  32532549 gtatgggttcggggtgggtacctatatacccattacccgtcccatacccgtgttttgaaatcggggaaaaccca 32532622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 12141368 - 12141467
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||| |||||||  ||||| ||||| |||||||||||||||| ||||||||| ||||| |||||| || || ||||||||||| ||| |||||||||||    
T  12141368 attttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgtcacccgtcccatatccgtgttttgagattggggaaaaccca 12141467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 12309555 - 12309654
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||| |||||||  ||||| ||||| ||| |||||||||||| ||| ||||| || |||||||||||| ||||||||||||||||| |||||| |||||    
T  12309555 attttttacatttgggacgggtttgggtatcggttcggggtgggtacatatatacctgttacccgttccatacccgtgttttgaaatcagggaataccca 12309654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 47 - 169
Target Start/End: Complemental strand, 34346134 - 34346011
Alignment:
Q  47 ttatataataggggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccg 145  Q
    |||||||| ||| |||||||||| ||||||||||||    |||||||||| ||| | |||||||||| |||||||||||||||||| || |||| |||||    
T  34346134 ttatataaaaggagtaataaattaattttctacattcggaacggatttgggtatagattcggggtgggtacctatatccccgttactcgctccgaacccg 34346035  T
Q  146 tgttttgaaattagggaaaaccca 169  Q
    | |||| ||||  || ||||||||    
T  34346034 tattttaaaatcgggaaaaaccca 34346011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 2367334 - 2367408
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||||| ||| ||||| |||||||||||| || |||||||||||||| ||  |||||||||||    
T  2367334 ggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgagatcggggaaaaccca 2367408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 169
Target Start/End: Complemental strand, 5863463 - 5863389
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||| ||||| || |||||| |||||||||||| || |||||||||||||||||  |||||||||||    
T  5863463 ggtatgggttcgaggtgggtatctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaaccca 5863389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 27738755 - 27738854
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||| |||||||  ||||| ||||| |||||||||||||||| ||| |||||  | ||||||||| || |||||||||||||||||  |||||||||||    
T  27738755 attttttacatttgggacgggtttgggtatgggttcggggtgggtacatatatatctgttacccgtcccatacccgtgttttgaaatcggggaaaaccca 27738854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 169
Target Start/End: Complemental strand, 3484003 - 3483929
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||||| ||||||||| |||||||||| | || ||||||||||| || ||  |||||||||||    
T  3484003 ggtatgggttcggggtgggtacctatatacccgttacccatcccatacccgtgtttcgagatcggggaaaaccca 3483929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 24602961 - 24602829
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||||||||  ||| || ||||| |||||||||||||||| || |||||| || |||||||||  | ||||| |||||||||||  |||||||||||    
T  24602961 attttctacattcgtgatgggtttgggtatgggttcggggtgggtatctatatacctgttacccgtcacatacccatgttttgaaatctgggaaaaccca 24602862  T
Q  170 a------tcaaaacggggaaaatccgtcaaatt 196  Q
    |      ||||||| ||||||| ||||||||||    
T  24602861 aacccagtcaaaacagggaaaaaccgtcaaatt 24602829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 196
Target Start/End: Original strand, 14506095 - 14506201
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa------tcaaaacggggaaaatccg 189  Q
    ||||||||||||||||| |||||| || |  ||||||||| || |||| ||||||||||||  ||||||||||||      |||||| |||||||| |||    
T  14506095 gtatgggttcggggtgggtacctaaatacttgttacccgtcccatacctgtgttttgaaatcggggaaaacccaaacccagtcaaaatggggaaaacccg 14506194  T
Q  190 tcaaatt 196  Q
    |||||||    
T  14506195 tcaaatt 14506201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 170
Target Start/End: Complemental strand, 20611054 - 20610987
Alignment:
Q  103 ttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||| ||||| |||||||||||| || ||||||| |||||||||  |||||| |||||    
T  20611054 ttcggggtggatacatatattcccgttacccgtcccctacccgtattttgaaatcggggaaaccccaa 20610987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 153
Target Start/End: Original strand, 24225709 - 24225764
Alignment:
Q  98 atgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttga 153  Q
    ||||||||||||||| ||||||||| |||||||||||| || || |||||||||||    
T  24225709 atgggttcggggtgggtacctatatacccgttacccgtcccatatccgtgttttga 24225764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 150
Target Start/End: Original strand, 27534692 - 27534747
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttt 150  Q
    ||||||| |||||||||| ||||||||| |||||||||||| || |||||||||||    
T  27534692 ggtatggattcggggtgggtacctatatacccgttacccgtcccatacccgtgttt 27534747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 169
Target Start/End: Complemental strand, 34178398 - 34178335
Alignment:
Q  106 ggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||| |||||||||||  |||||||||  ||||||||||||||||||| |||| |||||||    
T  34178398 ggggtgggtacctatatccttgttacccgtctcgtacccgtgttttgaaatcaggggaaaccca 34178335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 9442441 - 9442499
Alignment:
Q  98 atgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||||||| |||| ||||| ||| |||||||||||| || |||||||||||||||||    
T  9442441 atgggttcggagtgggtacctctatacccgttacccgtcccatacccgtgttttgaaat 9442499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 169
Target Start/End: Complemental strand, 10142598 - 10142524
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||| ||||||||||| ||||||||| ||||||||| || || ||||||| |||||| ||  |||||||||||    
T  10142598 ggtatgagttcggggtgggtacctatatacccgttacctgtcccatacccgttttttgagatcggggaaaaccca 10142524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 71 - 156
Target Start/End: Original strand, 11762428 - 11762514
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||||||||||  || || ||||| |||| |||||||||||| |||||||| |||||||||||| || ||||| ||||| |||||    
T  11762428 attttctacatttgggatgggtttgggtatgagttcggggtggacacctatatacccgttacccgtcccatacccttgtttagaaat 11762514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 32053096 - 32053170
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||| ||||||| ||| ||||| |||||||||||| || || || |||||||||||  |||||||||||    
T  32053096 ggtatgggtttggggtgggtacatatatacccgttacccgtcccatatccatgttttgaaatcggggaaaaccca 32053170  T

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Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 164
Target Start/End: Original strand, 9458671 - 9458740
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaa 164  Q
    |||||| ||||| ||||| ||| ||||||||||||| | || |||||||||| |||||||||| ||||||    
T  9458671 ggtatgagttcgaggtgggtacatatatccccgttatctgtcccgtacccgtattttgaaattggggaaa 9458740  T

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Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 83
Target Start/End: Complemental strand, 1947920 - 1947884
Alignment:
Q  47 ttatataataggggtaataaattgattttctacattt 83  Q
    |||||||| ||||||||||||||||||||||||||||    
T  1947920 ttatataaaaggggtaataaattgattttctacattt 1947884  T

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Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 155
Target Start/End: Complemental strand, 10925523 - 10925463
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaa 155  Q
    |||||||||||||||||||||| |||||| || |||||| |  ||||||| ||||||||||    
T  10925523 ggtatgggttcggggtggatacttatatctccattacccatctcgtacccatgttttgaaa 10925463  T

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Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 30816352 - 30816392
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    |||||||||||||||||||||||||| ||||||| ||||||    
T  30816352 aaacccaatcaaaacggggaaaatccatcaaattgggtttg 30816392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 166
Target Start/End: Complemental strand, 12678174 - 12678103
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaac 166  Q
    ||||||||||| |||||| ||||||||| ||| |||||||| || |||| |||| |||||||  ||||||||    
T  12678174 ggtatgggttcagggtgggtacctatataccctttacccgtcccatacctgtgtcttgaaatcggggaaaac 12678103  T

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Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 15498336 - 15498406
Alignment:
Q  99 tgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||| ||| ||||||||| ||| ||||| ||  | |||||||||||||||||  |||||||||||    
T  15498336 tgggttcgggatgggtacctatatacccattacctgtctcatacccgtgttttgaaatcggggaaaaccca 15498406  T

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Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 196
Target Start/End: Original strand, 27534778 - 27534811
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaatt 196  Q
    ||||||||||||||||||||||| ||||||||||    
T  27534778 aaacccaatcaaaacggggaaaacccgtcaaatt 27534811  T

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Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 3483917 - 3483877
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| ||||||||||||||| |||||||||| ||||||    
T  3483917 aaacccagtcaaaacggggaaaacccgtcaaattgggtttg 3483877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 5863377 - 5863337
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| ||||||||||||||| |||||||||| ||||||    
T  5863377 aaacccagtcaaaacggggaaaacccgtcaaattgggtttg 5863337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 10188074 - 10188034
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| ||||||||||||||| |||||||||| ||||||    
T  10188074 aaacccagtcaaaacggggaaaacccgtcaaattgggtttg 10188034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 32053176 - 32053216
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| ||||||||||||||| |||||||||| ||||||    
T  32053176 aaacccagtcaaaacggggaaaacccgtcaaattgggtttg 32053216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 4e-31; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 21 - 156
Target Start/End: Complemental strand, 30904970 - 30904835
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggattt-ggtatgggttcggggtggataccta 119  Q
    |||| ||| |||||||||||| ||  |||||||| ||||||| ||||||||||| |||||||   ||||||||| |||||||||||||||||| ||||||    
T  30904970 aaatgattaagggtttgggtttctatttatataaaaggggtagtaaattgatttcctacattcgagacggatttgggtatgggttcggggtgggtaccta 30904871  T
Q  120 tatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||||| ||||||| ||||||||||||||||||||    
T  30904870 tatccccg-tacccgtcccgtacccgtgttttgaaat 30904835  T

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Target: chr3; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 44639282 - 44639356
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||||| ||||||||| |||||||||||| || |||||||||||||| ||  |||||||||||    
T  44639282 ggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatatgggaaaaccca 44639356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 169
Target Start/End: Complemental strand, 7469857 - 7469784
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||||||||||||| ||||||||| |||||||||||| || ||||||||||| || || ||||||||||||    
T  7469857 gtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcagggaaaaccca 7469784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 170
Target Start/End: Original strand, 42243345 - 42243470
Alignment:
Q  46 cttatataataggggtaataaattgattttctacatttatgacggattt-ggtatgggttcggggtggatacctatatccccgttacccgttccgtaccc 144  Q
    ||||||||| ||||||||||||||||||||||||||||| || || ||| ||||||  || ||||||||||  ||||||| |||||||| |  | |||||    
T  42243345 cttatataaaaggggtaataaattgattttctacatttaggatgggtttgggtatgaatttggggtggataaatatatcctcgttacccatctcataccc 42243444  T
Q  145 gtgttttgaaattagggaaaacccaa 170  Q
    |||| |||||||  || |||||||||    
T  42243445 gtgtattgaaatcgggaaaaacccaa 42243470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 95 - 166
Target Start/End: Original strand, 23580835 - 23580906
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaac 166  Q
    ||||||||||||| |||| ||||||||| ||||||||||||| | ||| |||||||||||||| ||||||||    
T  23580835 ggtatgggttcggagtgggtacctatatacccgttacccgtttcatactcgtgttttgaaattggggaaaac 23580906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 44172609 - 44172708
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||| |||||||  ||||| ||||| |||||||||||||||| ||| ||||| |||||||||||| || |||||||||||||| ||  |||||||||||    
T  44172609 attttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgagatcggggaaaaccca 44172708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 44179309 - 44179408
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||| |||||||  ||||| ||||| |||||||||||||||| ||| ||||| |||||||||||| || |||||||||||||| ||  |||||||||||    
T  44179309 attttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgagatcggggaaaaccca 44179408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 95 - 166
Target Start/End: Complemental strand, 48305721 - 48305650
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaac 166  Q
    ||||| |||||||||||| ||||||||| |||| ||| |||||| |||||||||||||||||| ||||||||    
T  48305721 ggtataggttcggggtgggtacctatatacccgatactcgttccatacccgtgttttgaaattggggaaaac 48305650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 169
Target Start/End: Complemental strand, 23547022 - 23546948
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||||| ||||||||| |||||||||||| || ||||||||||| || ||  |||||||||||    
T  23547022 ggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaaccca 23546948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 169
Target Start/End: Complemental strand, 48390897 - 48390823
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||||||| || ||| ||||||||| |||||||||||| || |||||||||||||||||  |||||||||||    
T  48390897 ggtatgggttcaggatgggtacctatattcccgttacccgtcccatacccgtgttttgaaatcggggaaaaccca 48390823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 3385939 - 3385875
Alignment:
Q  92 tttggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||||||| |||| ||||| ||||||||||| ||||||| || ||||||||||||||||||||    
T  3385939 tttggtatggattcgtggtggctacctatatcctcgttacctgtcccgtacccgtgttttgaaat 3385875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 4016124 - 4016049
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||||||||||| |||| ||||||||| ||||||| |||| || ||||| |||||||||||  ||||||||||||    
T  4016124 ggtatgggttcggagtgggtacctatatacccgttatccgtcccatacccatgttttgaaatcggggaaaacccaa 4016049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 4557385 - 4557310
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||| ||||||||| | |||||||||| || ||||| ||||||||||   ||||||||||||    
T  4557385 ggtatgggttcggggtgggtacctatatactcgttacccgtcccatacccatgttttgaaaacggggaaaacccaa 4557310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 10043362 - 10043287
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||| | | |||| ||||||||||||| || ||||| ||||||||||  |||||||||||||    
T  10043362 ggtatgggttcggggtgggtgcatataaccccgttacccgtcccatacccatgttttgaaaccagggaaaacccaa 10043287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 42758382 - 42758457
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||||||||||||||| |||||||||| || ||||||||| || |||| ||||||||||||  ||| ||||||||    
T  42758382 ggtatgggttcggggtgcatacctatatacctgttacccgtcccatacctgtgttttgaaatcgggggaaacccaa 42758457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 49580047 - 49580146
Alignment:
Q  71 attttctacatttatgacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||| |||||||  ||||| |||| ||||||||||| ||||| ||||||||| | |||||||||| || |||||||||||||| ||  |||||||||||    
T  49580047 attttttacatttgggacgggtttgagtatgggttcgaggtgggtacctatatactcgttacccgtcccatacccgtgttttgagatcggggaaaaccca 49580146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 96 - 166
Target Start/End: Complemental strand, 22535920 - 22535850
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaac 166  Q
    ||||||||||||||||| | ||| ||| |||||||||||| || || ||||||||||||||| ||||||||    
T  22535920 gtatgggttcggggtgggtgcctgtatacccgttacccgtcccatatccgtgttttgaaattggggaaaac 22535850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 34025962 - 34026036
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||| |||||||||||| |||||||| | |||||||||| || |||| ||||||||||||  |||||||||||    
T  34025962 ggtatgagttcggggtggaaacctatatactcgttacccgtcccatacctgtgttttgaaatcggggaaaaccca 34026036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 169
Target Start/End: Complemental strand, 39655353 - 39655279
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||| ||||||| ||||||||| || ||||||||| || |||||||||||||| ||  |||||||||||    
T  39655353 ggtatgggtttggggtgggtacctatatacctgttacccgtcccatacccgtgttttgagatcggggaaaaccca 39655279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 169
Target Start/End: Complemental strand, 44953539 - 44953441
Alignment:
Q  72 ttttctacatttatgacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||| |||||||  ||||| |||| ||||| ||||||||||  ||||||||| |||||||||||| || |||||||||||||| ||  |||||||||||    
T  44953539 ttttttacatttgggacgggtttgagtatgagttcggggtgagtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaaccca 44953441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 153
Target Start/End: Original strand, 52198163 - 52198221
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttga 153  Q
    |||||||||||||||||| ||||||||| |||||||||||| || |||| |||||||||    
T  52198163 ggtatgggttcggggtgggtacctatatacccgttacccgtcccatacctgtgttttga 52198221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 96 - 166
Target Start/End: Original strand, 53631913 - 53631983
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaac 166  Q
    ||||||||||||||||| ||||||||| ||||||||||||  | ||| |||||||| ||||| ||||||||    
T  53631913 gtatgggttcggggtgggtacctatatacccgttacccgtctcatacacgtgttttaaaatttgggaaaac 53631983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 153
Target Start/End: Complemental strand, 17146229 - 17146172
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttga 153  Q
    |||||||||||||||||||||||||||  | |||||||||||| ||||| ||||||||    
T  17146229 gtatgggttcggggtggatacctatataactgttacccgttccatacccatgttttga 17146172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 169
Target Start/End: Complemental strand, 23154143 - 23154071
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||| |||| ||||||||| | ||||||||||||| |||||||| ||||||||  |||||||||||    
T  23154143 gtatgggttcggagtgggtacctatatactcgttacccgttccatacccgtg-tttgaaatcggggaaaaccca 23154071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 169
Target Start/End: Original strand, 29842317 - 29842389
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||||||||||||| ||||||||| ||||||||| || || |||||||||||| ||| | |||||||||||    
T  29842317 gtatgggttcggggtgggtacctatattcccgttaccagtcccatacccgtgtttt-aaaatcgggaaaaccca 29842389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 167
Target Start/End: Complemental strand, 44106897 - 44106800
Alignment:
Q  71 attttctacatttatgacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacc 167  Q
    ||||| |||||||  ||||| |||| ||||||||||||||| |||||||||||  ||||||| ||| || |||||||||||| | ||| |||||||||    
T  44106897 attttttacatttgggacgggtttgagtatgggttcggggtagatacctatatatccgttacgcgtcccatacccgtgttttaagattggggaaaacc 44106800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 61 - 156
Target Start/End: Original strand, 4553163 - 4553259
Alignment:
Q  61 taataaattgattttctacatttatgacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    ||||||||||||||| ||||||   ||||| |||| ||||||||||||||||  ||  ||||||||  |||||||||||| |||| |||||||||||    
T  4553163 taataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtatttatatccctattacccgttccgcacccatgttttgaaat 4553259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 150
Target Start/End: Original strand, 29284344 - 29284399
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttt 150  Q
    |||||||||||||| ||| ||||||||| |||||||||||| || |||||||||||    
T  29284344 ggtatgggttcgggctgggtacctatatacccgttacccgtcccatacccgtgttt 29284399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 30616361 - 30616286
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||| ||  |||| || |||||||||| || || ||||||||||||||  ||||||||||||    
T  30616361 ggtatgggttcggggtggttatatataacctcgttacccgtcccatatccgtgttttgaaatcggggaaaacccaa 30616286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 166
Target Start/End: Original strand, 34154422 - 34154493
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaac 166  Q
    |||||||||||||||||| ||||||||| |  |||||||||| | ||||| |||||||||||  ||||||||    
T  34154422 ggtatgggttcggggtgggtacctatattcttgttacccgtttcatacccatgttttgaaatcggggaaaac 34154493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 44252755 - 44252829
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||||| ||||||||| || ||||| ||| || ||||||||||| || ||  |||||||||||    
T  44252755 ggtatgggttcggggtgggtacctatatacctgttacacgtcccatacccgtgtttcgagatcggggaaaaccca 44252829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 156
Target Start/End: Original strand, 34119640 - 34119725
Alignment:
Q  72 ttttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||| |||||  ||||||||||| |||||||||||||||| ||||||||| || |||| ||||  | |||||||||||| ||||    
T  34119640 ttttctgcatttgggacggatttgggtatgggttcggggtgggtacctatatacctgttatccgtctcatacccgtgttttaaaat 34119725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 153
Target Start/End: Original strand, 52572618 - 52572675
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttga 153  Q
    |||||| |||||||||| | ||||||| |||||||||||| || ||||||||||||||    
T  52572618 gtatggattcggggtgggtccctatatacccgttacccgtcccatacccgtgttttga 52572675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 39655267 - 39655227
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||||||||||||||||||| |||||||||| ||||||    
T  39655267 aaacccaatcaaaacggggaaaacccgtcaaattgggtttg 39655227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 54317155 - 54317223
Alignment:
Q  98 atgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaac 166  Q
    ||||||||||||||| ||||||||| |||||||||||| |  |||  ||||||||||||  ||||||||    
T  54317155 atgggttcggggtgggtacctatatacccgttacccgtcctatacttgtgttttgaaatcggggaaaac 54317223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 153
Target Start/End: Original strand, 39728654 - 39728737
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttga 153  Q
    ||||| |||||||  ||||| ||||| |||||||||||||||| ||| ||||| |||||||||| | || ||||||| ||||||    
T  39728654 attttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccatcccatacccgtattttga 39728737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 206
Target Start/End: Original strand, 44252841 - 44252884
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttgatt 206  Q
    ||||||| ||||||||||||||| |||||||||| |||||||||    
T  44252841 aaacccagtcaaaacggggaaaacccgtcaaatttggtttgatt 44252884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 831096 - 831141
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttgatttg 208  Q
    ||||||| ||||||||||||||| |||||||||| |||||| ||||    
T  831096 aaacccagtcaaaacggggaaaacccgtcaaatttggtttggtttg 831141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 196
Target Start/End: Original strand, 34154508 - 34154541
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaatt 196  Q
    ||||||| ||||||||||||||||||||||||||    
T  34154508 aaacccagtcaaaacggggaaaatccgtcaaatt 34154541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 196
Target Start/End: Original strand, 39728765 - 39728798
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaatt 196  Q
    ||||||| ||||||||||||||||||||||||||    
T  39728765 aaacccagtcaaaacggggaaaatccgtcaaatt 39728798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 196
Target Start/End: Complemental strand, 48390811 - 48390778
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaatt 196  Q
    ||||||| ||||||||||||||||||||||||||    
T  48390811 aaacccagtcaaaacggggaaaatccgtcaaatt 48390778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 7469772 - 7469732
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| ||||||||||||||| |||||||||| ||||||    
T  7469772 aaacccagtcaaaacggggaaaacccgtcaaattgggtttg 7469732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 10371267 - 10371227
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| ||||||||||||||| |||||||||| ||||||    
T  10371267 aaacccagtcaaaacggggaaaacccgtcaaattgggtttg 10371227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 29858569 - 29858529
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| |||||||||||||||||||| ||||| ||||||    
T  29858569 aaacccagtcaaaacggggaaaatccgttaaattgggtttg 29858529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 34119750 - 34119790
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    |||||||||||||| |||||||| |||||||||||| ||||    
T  34119750 aaacccaatcaaaatggggaaaacccgtcaaattagatttg 34119790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 42758468 - 42758508
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| | |||||||||||||||||||||||| ||||||    
T  42758468 aaacccagttaaaacggggaaaatccgtcaaattgggtttg 42758508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 44953429 - 44953389
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| ||||||||||||||| |||||||||| ||||||    
T  44953429 aaacccagtcaaaacggggaaaacccgtcaaattgggtttg 44953389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 170
Target Start/End: Original strand, 49025707 - 49025763
Alignment:
Q  114 tacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||||||| || ||||||||| || |||||||||||||| ||  ||||||||||||    
T  49025707 tacctatatacctgttacccgtcccatacccgtgttttgagatcggggaaaacccaa 49025763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 6e-30; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 21 - 170
Target Start/End: Complemental strand, 8545504 - 8545354
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttg-gtatgggttcggggtggataccta 119  Q
    |||| ||||||||||||| || ||| |||||||| ||| ||  ||||||||||||||||||||  ||||  |||| ||||||||||||||||| || |||    
T  8545504 aaatgatttagggtttggatttctgtttatataaaaggagttgtaaattgattttctacatttgggacgagtttgagtatgggttcggggtgggtatcta 8545405  T
Q  120 tatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||| |||||| |||||||||||||||||  | ||||||||||    
T  8545404 tatccccgttactcgttccatacccgtgttttgaaatcggagaaaacccaa 8545354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 95 - 203
Target Start/End: Original strand, 17469263 - 17469377
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa------tcaaaacggggaaaatcc 188  Q
    |||||||||| ||||||| ||||||||| |||||||||||| || |||||||||||||||||  ||||||||||||      ||||||||||||||||||    
T  17469263 ggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaacccagtcaaaacggggaaaatcc 17469362  T
Q  189 gtcaaattaggtttg 203  Q
    |||||||| ||||||    
T  17469363 gtcaaattgggtttg 17469377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 21 - 156
Target Start/End: Original strand, 29918540 - 29918676
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttg-gtatgggttcggggtggataccta 119  Q
    |||| |||||||||||| ||| ||  |||||||| || ||||||||||||||||| |||||||  ||||| |||| |||||| |||||||||| ||| ||    
T  29918540 aaatgatttagggtttgagtttctatttatataaaagaggtaataaattgattttttacatttgggacgggtttgtgtatggtttcggggtgggtacata 29918639  T
Q  120 tatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    ||||   ||||||||||| ||||  ||||||||||||    
T  29918640 tatctttgttacccgttctgtacatgtgttttgaaat 29918676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 63 - 166
Target Start/End: Original strand, 45236040 - 45236144
Alignment:
Q  63 ataaattgattttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattaggg 161  Q
    ||||||| ||||| |||||||  ||||| | ||| |||||||||||||||| ||||||||| ||| |||||||| || ||||||||||||||||| ||||    
T  45236040 ataaattaattttttacatttgggacgggtatggatatgggttcggggtgggtacctatatacccattacccgtcccatacccgtgttttgaaatcaggg 45236139  T
Q  162 aaaac 166  Q
    |||||    
T  45236140 aaaac 45236144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 27932396 - 27932495
Alignment:
Q  71 attttctacatttatgacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||| |||||||  ||||||| || ||||||||||||||||| ||||||||| |||||||| ||| || |||||||||||||||||  |||||||||||    
T  27932396 attttttacatttgggacggatatgagtatgggttcggggtgggtacctatatacccgttactcgtcccatacccgtgttttgaaatcggggaaaaccca 27932495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 170
Target Start/End: Original strand, 14155490 - 14155615
Alignment:
Q  46 cttatataataggggtaataaattgattttctacatttatgacggattt-ggtatgggttcggggtggatacctatatccccgttacccgttccgtaccc 144  Q
    ||||||||| ||||||||||||||||||||||||||||| || || ||| ||||||  || ||||||||||  ||||||| |||||||| |    |||||    
T  14155490 cttatataaaaggggtaataaattgattttctacatttaggatgggtttgggtatgaatttggggtggataaatatatcctcgttacccatcttataccc 14155589  T
Q  145 gtgttttgaaattagggaaaacccaa 170  Q
    ||||||||||||  || |||||||||    
T  14155590 gtgttttgaaatcgggaaaaacccaa 14155615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 21 - 156
Target Start/End: Original strand, 30903979 - 30904115
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggataccta 119  Q
    |||| ||||| ||||| |||| ||  |||||||| | | |||||||||||||||||||||||   ||| ||||||| |||||||  ||||||| ||| ||    
T  30903979 aaatgatttaaggttttggtttctatttatataaaatgtgtaataaattgattttctacattcgggactgatttgggtatgggtatggggtgggtactta 30904078  T
Q  120 tatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||| || ||||||||  |||||||||||||||||||    
T  30904079 tatctccattacccgtctcgtacccgtgttttgaaat 30904115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 56 - 170
Target Start/End: Complemental strand, 9642471 - 9642356
Alignment:
Q  56 aggggtaataaattgattttctacatttatgacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaa 154  Q
    |||||||| ||| | ||||| |||||||  ||||| | || ||||||||||||| ||||||  |||| ||||||||||||| || |||||||||||||||    
T  9642471 aggggtaaaaaaataattttttacatttgggacgggtatgagtatgggttcgggatggatatatataaccccgttacccgtcccatacccgtgttttgaa 9642372  T
Q  155 attagggaaaacccaa 170  Q
    ||  ||||||||||||    
T  9642371 atcggggaaaacccaa 9642356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 63 - 206
Target Start/End: Original strand, 14186295 - 14186445
Alignment:
Q  63 ataaattgattttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattaggg 161  Q
    ||||||| |||||||||||| | ||||| ||||| ||||||||| |||||  |||||||||  ||||||||| | || |||||||||||||||||   |     
T  14186295 ataaattaattttctacattcaggacgggtttgggtatgggttcagggtgagtacctatatatccgttacccatcccatacccgtgttttgaaatcgaga 14186394  T
Q  162 a------aaacccaatcaaaacggggaaaatccgtcaaattaggtttgatt 206  Q
    |      ||||||||||||||||| ||||| ||||||||| ||||||||||    
T  14186395 aaaactcaaacccaatcaaaacggagaaaacccgtcaaatcaggtttgatt 14186445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 24927957 - 24928031
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||||| ||||||||| ||||||||||||  | ||||||||||| || || ||||||||||||    
T  24927957 ggtatgggttcggggtgggtacctatatacccgttacccgtctcatacccgtgtttcgagatcagggaaaaccca 24928031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 152
Target Start/End: Original strand, 28345450 - 28345556
Alignment:
Q  47 ttatataataggggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccg 145  Q
    |||||||| |||||||||| ||| |||||||||||| | |||   ||||| |||||||||||||||| | ||||||||| |||||||| | | |||||||    
T  28345450 ttatataaaaggggtaatatatttattttctacattcaggacaagtttgggtatgggttcggggtgggtgcctatatcctcgttacccatcctgtacccg 28345549  T
Q  146 tgttttg 152  Q
    |||||||    
T  28345550 tgttttg 28345556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 32303069 - 32303143
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||||| ||||||||| |||||||||||| || ||||||||||| || ||  |||||||||||    
T  32303069 ggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaaccca 32303143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 6388660 - 6388599
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatt 82  Q
    |||| |||||||||||||||| ||| |||||||| | |||||||||||||||||||||||||    
T  6388660 aaatgatttagggtttgggtttctgtttatataaaatgggtaataaattgattttctacatt 6388599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 95 - 168
Target Start/End: Complemental strand, 15068667 - 15068595
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccc 168  Q
    |||||||||||||||||||||| ||||| ||||||||| || |||||||||| |||||||||  ||||||||||    
T  15068667 ggtatgggttcggggtggatacatatat-cccgttacctgtcccgtacccgtattttgaaatcggggaaaaccc 15068595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 86 - 203
Target Start/End: Complemental strand, 36132007 - 36131883
Alignment:
Q  86 gacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattaggga------aaacccaatcaaaacg 178  Q
    |||||||||| ||||| ||||||||||||||||| ||| ||| |||||| | || ||| |||||||||||||  ||||      ||||||||||||||||    
T  36132007 gacggatttgtgtatgagttcggggtggatacctgtatgccctttacccatcccatactcgtgttttgaaataggggaaaactcaaacccaatcaaaacg 36131908  T
Q  179 gggaaaatccgtcaaattaggtttg 203  Q
    |  ||||||| ||||||||||||||    
T  36131907 gaaaaaatccatcaaattaggtttg 36131883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 170
Target Start/End: Original strand, 14687378 - 14687482
Alignment:
Q  67 attgattttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaa 165  Q
    |||||||||| ||||| | ||||  ||||| |||||||||||||||||||| |||||||| ||| | ||| || |||| ||||||||||||  |||||||    
T  14687378 attgattttccacattcaggacgagtttgggtatgggttcggggtggatacatatatccctgtttctcgtcccatacctgtgttttgaaatcggggaaaa 14687477  T
Q  166 cccaa 170  Q
    |||||    
T  14687478 cccaa 14687482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 170
Target Start/End: Complemental strand, 17084263 - 17084112
Alignment:
Q  22 aataatttagggtttgggttactgcttatataataggggtaataaattgattttct--acatttatgacggatttgg-tatgggttcggggtggatacct 118  Q
    |||||||||||| |||||||  |  |||||||| | ||  |||||||||||||| |  |||||  ||| || ||||| |||| ||||||||||| || ||    
T  17084263 aataatttagggcttgggtttatatttatataaaaaggacaataaattgattttttttacattcgtgatgggtttggatatgagttcggggtgggtatct 17084164  T
Q  119 atatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||  |||||||||||||| ||||  | ||||||||||    
T  17084163 atatccccgttacccgtctcgtacccgtgttttaaaatcggagaaaacccaa 17084112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 20399603 - 20399675
Alignment:
Q  98 atgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||||||||||||| || |||||| |||||||||||| || |||||||||||||||||  | ||||||||||    
T  20399603 atgggttcggggtgggtatctatatacccgttacccgtcccatacccgtgttttgaaatcggagaaaacccaa 20399675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 86 - 172
Target Start/End: Complemental strand, 43113716 - 43113629
Alignment:
Q  86 gacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaatc 172  Q
    ||||||||||| |||| ||||||||||| ||||||||| || ||||||||| || | |||||||||||||||  || |||||||||||    
T  43113716 gacggatttgggtatgagttcggggtgggtacctatatacctgttacccgtcccatgcccgtgttttgaaatcgggaaaaacccaatc 43113629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 156
Target Start/End: Original strand, 5700315 - 5700425
Alignment:
Q  47 ttatataataggggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccg 145  Q
    |||||||| |||||||| ||||| ||||| ||||||   || |||||||| |||||||||| ||||| || |||||||||||||||| ||  | |||| |    
T  5700315 ttatataaaaggggtaaaaaattaattttatacattcgggatggatttgggtatgggttcgaggtgggtatctatatccccgttaccagtctcatacctg 5700414  T
Q  146 tgttttgaaat 156  Q
    |||||||||||    
T  5700415 tgttttgaaat 5700425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 170
Target Start/End: Original strand, 10297463 - 10297541
Alignment:
Q  92 tttggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||| |||| | ||| ||||||||||||||| || |||| ||||| |||||||||  ||||||||||||    
T  10297463 tttggtatgggttcagggtaggtacatatatccccgttacctgtcccgtccccgtattttgaaatcggggaaaacccaa 10297541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 71 - 166
Target Start/End: Complemental strand, 24870129 - 24870033
Alignment:
Q  71 attttctacatttatgacggattt-ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaac 166  Q
    ||||| |||||||  ||||| ||| |||||||| ||||||||| ||||||||| ||||||||||||  | |||||||||||| ||||  ||||||||    
T  24870129 attttttacatttgggacgggtttaggtatgggctcggggtgggtacctatatacccgttacccgtcacatacccgtgttttaaaatcggggaaaac 24870033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 71 - 166
Target Start/End: Complemental strand, 40248476 - 40248380
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaac 166  Q
    ||||| |||||||  ||||||| ||| |||||||||||| ||| ||||||||| ||||||| ||||  | |||||||||||||||||  ||||||||    
T  40248476 attttttacatttgggacggatatgggtatgggttcgggatgggtacctatatacccgttatccgtctcatacccgtgttttgaaatcggggaaaac 40248380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 156
Target Start/End: Original strand, 24568936 - 24569007
Alignment:
Q  86 gacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||||||| ||||||||||||||||||||||||||| |||| |||| || || ||||| |||| ||||||    
T  24568936 gacggatttgagtatgggttcggggtggatacctatatacccgctacctgtcccatacccatgttgtgaaat 24569007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 153
Target Start/End: Original strand, 34777049 - 34777132
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttga 153  Q
    ||||| |||||||  || |||||||| |||||||||||||||| |||||| || || ||||| |||||| ||||||||||||||    
T  34777049 attttttacatttgggatggatttgggtatgggttcggggtgggtacctaaatacctgttactcgttccatacccgtgttttga 34777132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 1063515 - 1063589
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||| ||||||||||| ||| ||||| ||||||| |||| || |||||||||||||||||  || ||||||||    
T  1063515 ggtatgagttcggggtgggtacttatatacccgttaaccgtcccatacccgtgttttgaaatcgggaaaaaccca 1063589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 169
Target Start/End: Complemental strand, 29108902 - 29108828
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||||| ||| ||||| |||||||||||| || ||||| |||||| ||||  || ||||||||    
T  29108902 ggtatgggttcggggtgggtacatatatacccgttacccgtcccatacccatgttttaaaatcgggaaaaaccca 29108828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 169
Target Start/End: Complemental strand, 39445656 - 39445582
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||| ||||||||||| ||||||||  ||||||||| || || |||||||||||||||||  || ||||||||    
T  39445656 ggtatgagttcggggtgggtacctataaacccgttacctgtcccatacccgtgttttgaaatcgggaaaaaccca 39445582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 144
Target Start/End: Original strand, 2075866 - 2075915
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtaccc 144  Q
    |||||||||||||||||| ||||||||| |||||||||||| || |||||    
T  2075866 ggtatgggttcggggtgggtacctatatacccgttacccgtcccataccc 2075915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 156
Target Start/End: Complemental strand, 27777278 - 27777217
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||||||||||||||| ||||| |||| | |||||| || ||||||| ||||||||||||    
T  27777278 ggtatgggttcggggtgggtacctgtatctctgttacctgtcccgtacctgtgttttgaaat 27777217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 1012627 - 1012701
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||| ||||||||| ||| |||||||| || ||| | |||||| ||||  ||||||||||||    
T  1012627 ggtatgggttcggggtgggtacctatatacccattacccgtcccatactcatgtttt-aaatcggggaaaacccaa 1012701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 30481501 - 30481426
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||| ||||||||||| | |||| |||  | ||| ||| ||||||||| ||| |||||||||    
T  30481501 ggtatgggttcggggtgggtacctatatcctcattactcgtctcatactcgtattttgaaatcaggaaaaacccaa 30481426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 37961042 - 37960967
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||| ||||||||||  ||||||||| || |||||| || || |||||||||||| ||||  ||||||||||||    
T  37961042 ggtatgagttcggggtgtgtacctatatacctgttacctgtcccatacccgtgtttttaaatcggggaaaacccaa 37960967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 40789597 - 40789672
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||| |||||||||||| ||| |||||||| ||||||||| | |||||  | || ||||||| ||||||||||||    
T  40789597 ggtataggttcggggtgggtacatatatccctgttacccgtccagtacctatattatgaaattggggaaaacccaa 40789672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 156
Target Start/End: Complemental strand, 9476142 - 9476032
Alignment:
Q  47 ttatataataggggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccg 145  Q
    |||||||  ||||||||||| || ||||||||||||   || || ||||| |||||||||| ||||| ||  ||||||||||||||  || ||||| |||    
T  9476142 ttatatataaggggtaataatttaattttctacattcgggatgggtttgggtatgggttcgaggtgggtatttatatccccgttacttgtcccgtatccg 9476043  T
Q  146 tgttttgaaat 156  Q
    | |||||||||    
T  9476042 ttttttgaaat 9476032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 170
Target Start/End: Complemental strand, 12468373 - 12468224
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttg-gtatgggttcggggtggataccta 119  Q
    |||||||||||| |||| ||| ||  |||||||| | ||||||||| |||||||||||||||    ||| ||||| ||||| ||||||||| | ||||||    
T  12468373 aaataatttaggatttgcgtttctctttatataaaaagggtaataagttgattttctacattcggaacgaatttgagtatgagttcggggttggtaccta 12468274  T
Q  120 tatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
     || ||| ||||  ||  ||||||||||||| |||||   |||||||||||    
T  12468273 cat-cccattacatgtctcgtacccgtgtttcgaaatcgaggaaaacccaa 12468224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 196
Target Start/End: Complemental strand, 5858646 - 5858613
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaatt 196  Q
    ||||||||||||||||||||||| ||||||||||    
T  5858646 aaacccaatcaaaacggggaaaacccgtcaaatt 5858613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 2075828 - 2075788
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| ||||||||| |||||||||||||||| ||||||    
T  2075828 aaacccagtcaaaacggagaaaatccgtcaaattgggtttg 2075788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 24569032 - 24569071
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||||||||| ||||||||| |||||||||||||||||    
T  24569032 aaacccaatcaaa-cggggaaaacccgtcaaattaggtttg 24569071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 24928043 - 24928083
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| ||||||||||||||| |||||||||| ||||||    
T  24928043 aaacccagtcaaaacggggaaaacccgtcaaattgggtttg 24928083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 27932507 - 27932547
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| ||||||||||||||| |||||||||| ||||||    
T  27932507 aaacccagtcaaaacggggaaaacccgtcaaattgggtttg 27932547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 29108816 - 29108776
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| ||||||||||||||| |||||||||| ||||||    
T  29108816 aaacccagtcaaaacggggaaaacccgtcaaattgggtttg 29108776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 30481415 - 30481375
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||||||||||| |||||||||| |||| |||||||||    
T  30481415 aaacccaatcaaaacagggaaaatccatcaatttaggtttg 30481375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 32303155 - 32303195
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| ||||||||||||||| |||||||||| ||||||    
T  32303155 aaacccagtcaaaacggggaaaacccgtcaaattgggtttg 32303195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 35215555 - 35215618
Alignment:
Q  106 ggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||||| ||||||||| | ||||||||||  | |||||||||||||||| | ||||||||||||    
T  35215555 ggggtgggtacctatatactcgttacccgtctcatacccgtgttttgaaa-tcgggaaaacccaa 35215618  T

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Target: chr1 (Bit Score: 67; Significance: 6e-30; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 21 - 170
Target Start/End: Complemental strand, 48125838 - 48125688
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggataccta 119  Q
    ||||||||||| ||||| ||| ||  |||||||| || |||| |||||||||||||||||||   ||||  ||||| |||||||||||||||||||||||    
T  48125838 aaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcggggtggataccta 48125739  T
Q  120 tatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||| |||||||||| ||||||||||||||| |||| ||| |||| ||||    
T  48125738 tatcctcgttacccgtcccgtacccgtgttttaaaatcaggaaaaatccaa 48125688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 170
Target Start/End: Original strand, 39219192 - 39219342
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggataccta 119  Q
    |||| |||||||||||| ||| ||  |||||||| || ||||||||||| ||||||||||||||  |||  ||||| |||||||||||||||| ||| |     
T  39219192 aaatgatttagggtttgagtttctatttatataaaagaggtaataaattaattttctacatttagaacgagtttgggtatgggttcggggtgggtacatg 39219291  T
Q  120 tatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||||||||||  |||||||||||||||||| ||||  ||||||||||||    
T  39219292 tatccccgttacttgttccgtacccgtgttttaaaatcggggaaaacccaa 39219342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 46 - 170
Target Start/End: Original strand, 13798197 - 13798322
Alignment:
Q  46 cttatataataggggtaataaattgattttctacatttatgacggattt-ggtatgggttcggggtggatacctatatccccgttacccgttccgtaccc 144  Q
    ||||||||| ||||||||||||||||||||||||||||| || || ||| ||||||  || ||||||||||  ||||||| |||||||| |  | |||||    
T  13798197 cttatataaaaggggtaataaattgattttctacatttaggatgggtttaggtatgaatttggggtggataaatatatcctcgttacccatctcataccc 13798296  T
Q  145 gtgttttgaaattagggaaaacccaa 170  Q
    ||||||||||||  || |||||||||    
T  13798297 gtgttttgaaatcgggaaaaacccaa 13798322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 71 - 169
Target Start/End: Complemental strand, 24236866 - 24236767
Alignment:
Q  71 attttctacatttatgacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||| |||||||  ||||| |||| ||||||||||||||||| ||||||||| |||||| |||||||| |||||||||||||| ||  |||||||||||    
T  24236866 attttttacatttgggacgggtttgagtatgggttcggggtgggtacctatatacccgttccccgttccatacccgtgttttgagatcggggaaaaccca 24236767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 10450139 - 10450038
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaatcaaaacggggaaaatccgtcaaa 194  Q
    |||||| ||||||||||| ||| |||||||| ||||||||  |||||||||| |||| ||||| |||||| |||| |||||  |||||||| ||||||||    
T  10450139 ggtatgagttcggggtgggtacatatatccctgttacccgccccgtacccgtattttaaaattggggaaagcccagtcaaattggggaaaacccgtcaaa 10450040  T
Q  195 tt 196  Q
    ||    
T  10450039 tt 10450038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 169
Target Start/End: Complemental strand, 23490854 - 23490777
Alignment:
Q  92 tttggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||||||||||||||||| ||||||||| |||||||||||| || ||||||||||| || ||  |||||||||||    
T  23490854 tttggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaaccca 23490777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 96 - 156
Target Start/End: Complemental strand, 10778646 - 10778586
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||||||||||||||||| ||||| ||||||||||||| || |||||||||||||||||    
T  10778646 gtatgggttcggggtggatatctataaccccgttacccgtcccatacccgtgttttgaaat 10778586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 97 - 169
Target Start/End: Original strand, 16408953 - 16409025
Alignment:
Q  97 tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||| | ||||||||| || ||||||||| || |||||||||||||||||| |||||||||||    
T  16408953 tatgggttcggggtcggtacctatatacctgttacccgtcccatacccgtgttttgaaattggggaaaaccca 16409025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 96 - 167
Target Start/End: Complemental strand, 3628064 - 3627993
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacc 167  Q
    ||||||||||||||||| |||||| || |||||||||||| || |||||||||||||||||  |||||||||    
T  3628064 gtatgggttcggggtgggtacctacatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacc 3627993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 29936400 - 29936499
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||| |||||||  ||||| ||||| |||||||||||||||| ||||||||| |||||||||||| || ||||||| |||||| ||  |||||||||||    
T  29936400 attttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtattttgagatcggggaaaaccca 29936499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 34673362 - 34673287
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||| ||||||||| ||||||||| ||  | |||||||||||||||||| || |||||||||    
T  34673362 ggtatgggttcggggtgggtacctatatacccgttaccagtctcatacccgtgttttgaaattgggaaaaacccaa 34673287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 169
Target Start/End: Complemental strand, 36187300 - 36187226
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||||||| |||||| ||||||||| |||||||||||| || |||||||||||||| ||  |||||||||||    
T  36187300 ggtatgggttcagggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaaccca 36187226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 169
Target Start/End: Complemental strand, 50426741 - 50426667
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||||| ||||||||| ||||||| ||||  | ||||||||||||||||| ||||||| ||||    
T  50426741 ggtatgggttcggggtgggtacctatatacccgttatccgtctcatacccgtgttttgaaatcagggaaagccca 50426667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 169
Target Start/End: Complemental strand, 19572591 - 19572518
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||||||||||||| ||||||||| ||||||||| || || |||||||||||||||||  || ||||||||    
T  19572591 gtatgggttcggggtgggtacctatatacccgttacctgtcccatacccgtgttttgaaatcgggaaaaaccca 19572518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 150
Target Start/End: Original strand, 28297943 - 28297998
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttt 150  Q
    |||||||||||||||||| ||||||||| |||||||||||| || |||||||||||    
T  28297943 ggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttt 28297998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 44615555 - 44615480
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||| ||| ||||||| ||||||||| || ||||||||| || |||||||||||| |||| |||||||||||||    
T  44615555 ggtatgagtttggggtgggtacctatatacctgttacccgtcccatacccgtgtttttaaatcagggaaaacccaa 44615480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 44793014 - 44793089
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||| ||| ||||||| ||||||||| || ||||||||| || |||||||||||| |||| |||||||||||||    
T  44793014 ggtatgagtttggggtgggtacctatatacctgttacccgtcccatacccgtgtttttaaatcagggaaaacccaa 44793089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 166
Target Start/End: Complemental strand, 49250853 - 49250782
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaac 166  Q
    |||||||||||| ||||||||||||||| ||| |||||||| || |||||||||||||| ||  ||||||||    
T  49250853 ggtatgggttcgaggtggatacctatatacccattacccgtcccatacccgtgttttgagatcggggaaaac 49250782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 5181048 - 5181122
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||| ||||||| | ||||||| |||||||||||| || ||||||| |||||||||  |||||||||||    
T  5181048 ggtatgggtttggggtgggtgcctatatacccgttacccgtcccatacccgtattttgaaatcggggaaaaccca 5181122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 165
Target Start/End: Complemental strand, 9982970 - 9982900
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaa 165  Q
    |||||||||||||||||| ||||||||| | |||||||| | || | |||||||||||||||| |||||||    
T  9982970 ggtatgggttcggggtgggtacctatatactcgttacccatcccattcccgtgttttgaaattggggaaaa 9982900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 17134956 - 17135030
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||  | ||||||||| ||||||||||||  | |||||||||||||||||  |||||||||||    
T  17134956 ggtatgggttcggggatggtacctatatacccgttacccgtctcatacccgtgttttgaaatcggggaaaaccca 17135030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 156
Target Start/End: Original strand, 12494995 - 12495080
Alignment:
Q  72 ttttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    ||||||||||||  ||||| ||||| |||||||||| ||||| ||||||||| |||||||| ||| || || ||||||||||||||    
T  12494995 ttttctacatttgggacgggtttgggtatgggttcgaggtgggtacctatatacccgttacacgtcccatatccgtgttttgaaat 12495080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 156
Target Start/End: Original strand, 23058475 - 23058536
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||||||||||||||| ||||||||||||||||||||||  ||||| ||  |||||||||    
T  23058475 ggtatgggttcggggtgggtacctatatccccgttacccgtctcgtactcgcattttgaaat 23058536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 16237384 - 16237309
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||||||||||||||   ||| ||||||| |||||||||| || ||||||| |||||||||  ||||||||||||    
T  16237384 ggtatgggttcggggttagtacatatatcctcgttacccgtcccttacccgtattttgaaatcggggaaaacccaa 16237309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 34085244 - 34085319
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||| ||| |||| ||||||||||| | || ||| |||||||||||||  || |||||||||    
T  34085244 ggtatgggttcggggtgggtacatataaccccgttacccatcccatactcgtgttttgaaatcgggaaaaacccaa 34085319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 16433244 - 16433140
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaac------ccaatcaaaacggggaaaatcc 188  Q
    |||||||||||||||    |||||||||  ||||||||||| || |||||||||||||||||  | ||||||      |||||||||| |||||||||||    
T  16433244 ggtatgggttcggggg---tacctatatatccgttacccgtcccatacccgtgttttgaaatcggagaaaactcaaacccaatcaaaatggggaaaatcc 16433148  T
Q  189 gtcaaatt 196  Q
    ||||||||    
T  16433147 gtcaaatt 16433140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 169
Target Start/End: Complemental strand, 18354160 - 18354086
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||| ||||||||||||  || ||||| |||||||||||| || ||||| |||||||||||  |||||||||||    
T  18354160 ggtatcggttcggggtgggaacttatatacccgttacccgtcccatacccatgttttgaaatcggggaaaaccca 18354086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 168
Target Start/End: Complemental strand, 19003741 - 19003673
Alignment:
Q  100 gggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccc 168  Q
    ||||| ||||||||||| ||||||||||||| |||| || ||||||| ||||| |||  ||||||||||    
T  19003741 gggtttggggtggatacatatatccccgttatccgtcccatacccgtattttgtaatcggggaaaaccc 19003673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 20774661 - 20774701
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| |||||||||||||||||||||||||| ||||||    
T  20774661 aaacccagtcaaaacggggaaaatccgtcaaattgggtttg 20774701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 23968674 - 23968714
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    |||||||||||||| ||||||||||||||||||| ||||||    
T  23968674 aaacccaatcaaaatggggaaaatccgtcaaattgggtttg 23968714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 42439748 - 42439692
Alignment:
Q  97 tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttga 153  Q
    |||||||||||||||| ||||||||| |||||||| ||| || ||||| ||||||||    
T  42439748 tatgggttcggggtgggtacctatatacccgttactcgtcccatacccatgttttga 42439692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 206
Target Start/End: Original strand, 16409037 - 16409080
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttgatt 206  Q
    ||||||| ||||||||||||||| |||||||||| |||||||||    
T  16409037 aaacccagtcaaaacggggaaaacccgtcaaattgggtttgatt 16409080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 169
Target Start/End: Original strand, 24710875 - 24710930
Alignment:
Q  114 tacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||||| |||||||||||| || |||||||||||||| ||  |||||||||||    
T  24710875 tacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaaccca 24710930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 151
Target Start/End: Complemental strand, 41477107 - 41476976
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggattt-ggtatgggttcggggtggataccta 119  Q
    ||||||||||||||||   || ||  |||||||| | |||||| ||||||||||||| | ||   ||||| ||| ||||||| |||||||||| ||| ||    
T  41477107 aaataatttagggtttccatttctctttatataaaaagggtaacaaattgattttctgctttcgggacgggtttgggtatggattcggggtgggtacata 41477008  T
Q  120 tatccccgttacccgttccgtacccgtgtttt 151  Q
    ||||| ||||| |||| |||||| ||| ||||    
T  41477007 tatccacgttatccgtcccgtactcgtatttt 41476976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 153
Target Start/End: Original strand, 51421842 - 51421925
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttga 153  Q
    ||||| |||||||  ||||| ||||| |||||||||||||||| ||| ||||| |  ||||||||| || ||||||||||||||    
T  51421842 attttttacatttgggacgggtttgggtatgggttcggggtgggtacatatatacatgttacccgtcccatacccgtgttttga 51421925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 156
Target Start/End: Original strand, 8880408 - 8880518
Alignment:
Q  47 ttatataataggggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccg 145  Q
    ||||| || |||||||||||||| |||||   |||||  ||||| ||||| ||||||| | |||||||||||| ||||||| ||||| || | |||| ||    
T  8880408 ttataaaaaaggggtaataaatttatttttagcatttgggacgggtttgggtatgggtccagggtggatacctttatccccattacctgtcctgtactcg 8880507  T
Q  146 tgttttgaaat 156  Q
    |||||| ||||    
T  8880508 tgtttttaaat 8880518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 16903532 - 16903594
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaatt 157  Q
    |||||| ||||||||||| ||||||||||||| |||||  | |||||| |||||||| |||||    
T  16903532 ggtatgagttcggggtgggtacctatatccccattacctatcccgtactcgtgttttaaaatt 16903594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 156
Target Start/End: Complemental strand, 25154952 - 25154846
Alignment:
Q  51 ataataggggtaataaattgattttctacatttatgacggatttggt-atgggttcggggtggatacctatatccccgttacccgttccgtacccgtgtt 149  Q
    |||| ||||||| | ||||||||||||| ||| | ||||| |||||  ||| |||||  |||| ||| ||||||||| |||| ||| |||||| ||||||    
T  25154952 ataaaaggggtagtgaattgattttctaaattcaggacgggtttgggcatgagttcgaagtgggtacttatatccccattactcgtcccgtactcgtgtt 25154853  T
Q  150 ttgaaat 156  Q
    |||||||    
T  25154852 ttgaaat 25154846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 33293590 - 33293536
Alignment:
Q  116 cctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||||||||| |||||||| || |||||||||||||||||  || |||||||||    
T  33293590 cctatatccccattacccgtcccatacccgtgttttgaaatcgggaaaaacccaa 33293536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 166
Target Start/End: Complemental strand, 35069968 - 35069898
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaac 166  Q
    ||||||||||||||||| ||| |||||||| |||||||||   |||||||| || ||||||  ||||||||    
T  35069968 gtatgggttcggggtgggtacatatatccctgttacccgtcttgtacccgtattatgaaatcggggaaaac 35069898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 170
Target Start/End: Complemental strand, 35936904 - 35936834
Alignment:
Q  100 gggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||| ||||||| ||||||||| ||||||| |||| || ||| |||| ||||||||  ||||||||||||    
T  35936904 gggtttggggtgggtacctatatacccgttatccgtcccatactcgtgatttgaaatcggggaaaacccaa 35936834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 95 - 156
Target Start/End: Complemental strand, 34060105 - 34060044
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    ||||||||||||| |||| ||||||||| || |||| ||||  | |||||||||||||||||    
T  34060105 ggtatgggttcggagtgggtacctatatacctgttatccgtctcatacccgtgttttgaaat 34060044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 95 - 156
Target Start/End: Complemental strand, 42707916 - 42707856
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||||||||||| ||  ||| ||||| |||||||||||| || |||||||||||||||||    
T  42707916 ggtatgggttcggg-tgagtacttatattcccgttacccgtcccatacccgtgttttgaaat 42707856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 19572506 - 19572466
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| |||||| |||||||| |||||||||||||||||    
T  19572506 aaacccagtcaaaatggggaaaacccgtcaaattaggtttg 19572466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 23966883 - 23966919
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacc 132  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  23966883 gtatgggttcggggtgggtacctatatacccgttacc 23966919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 170
Target Start/End: Complemental strand, 29871390 - 29871290
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||||||||   ||||| ||||| |||| |||| |||||| ||||||||| || |||||| || || ||||| |||||||||||  | |||||||||    
T  29871390 attttctacattcgggacgggtttgggtatgagttcagggtgggtacctatataccagttacctgtcccatacccatgttttgaaatcggagaaaaccca 29871291  T
Q  170 a 170  Q
    |    
T  29871290 a 29871290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 6e-24; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 156
Target Start/End: Complemental strand, 21956969 - 21956834
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggataccta 119  Q
    |||| ||||||||||||||||  |  |||||||| |||| ||||||||||||||||||||||  | |||  ||||| ||||||||||||||||  |||||    
T  21956969 aaatgatttagggtttgggtttttatttatataaaaggg-taataaattgattttctacattcgtaacgagtttgggtatgggttcggggtgggcaccta 21956871  T
Q  120 tatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||||||||| | ||||||||||||||||| ||||    
T  21956870 tatccccgttactcattccgtacccgtgttttaaaat 21956834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 47 - 170
Target Start/End: Complemental strand, 25298963 - 25298839
Alignment:
Q  47 ttatataataggggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccg 145  Q
    ||||| || |||||| |||||||||||||| ||||||   |||| ||||| ||||||||||||||||| | |||||||||| |||||| | |||||||||    
T  25298963 ttataaaaaaggggtgataaattgattttcaacatttggtacgggtttgggtatgggttcggggtggacagctatatccccattacccatcccgtacccg 25298864  T
Q  146 tgttttgaaattagggaaaacccaa 170  Q
    |||||||||||  || |||||||||    
T  25298863 tgttttgaaatccggaaaaacccaa 25298839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 25941082 - 25941227
Alignment:
Q  26 atttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggatacctatatcc 124  Q
    |||||||  ||||||| ||  |||||||| |||||| |||||||||||||||||||    |||   ||||| |||||||||||||||| ||||||| | |    
T  25941082 atttaggccttgggtttctatttatataaaaggggttataaattgattttctacatccgagacatgtttgggtatgggttcggggtgggtacctatcttc 25941181  T
Q  125 ccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||| || ||||||||||||||||||||  || |||||||||    
T  25941182 ccgttacctgtcccgtacccgtgttttgaaatcgggaaaaacccaa 25941227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 64 - 170
Target Start/End: Complemental strand, 19883169 - 19883062
Alignment:
Q  64 taaattgattttctacatttatgacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattaggga 162  Q
    |||||||||||| ||||||   ||||  |||| |||| ||||||||||||||||||||||||||||||||| | ||||| ||||||||| ||||  ||||    
T  19883169 taaattgattttatacattcgggacgagtttgtgtatcggttcggggtggatacctatatccccgttacccttcccgtatccgtgttttaaaatcgggga 19883070  T
Q  163 aaacccaa 170  Q
    ||||||||    
T  19883069 aaacccaa 19883062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 29527826 - 29527901
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||| ||| ||||||||||||||||||  ||||||||| |||||||||  ||||||||||||    
T  29527826 ggtatgggttcggggtgggtacatatatccccgttacccgtcacgtacccgtattttgaaatcggggaaaacccaa 29527901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 151
Target Start/End: Complemental strand, 33516228 - 33516097
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggataccta 119  Q
    |||| |||||||||||| |||  |  |||||||| |||||||||| ||||||||| |||||||  ||||| ||||| ||| |||||||||||| ||| ||    
T  33516228 aaatgatttagggtttgagtttttatttatataaaaggggtaatacattgattttttacatttgagacgggtttgggtataggttcggggtgggtactta 33516129  T
Q  120 tatccccgttacccgttccgtacccgtgtttt 151  Q
    |||||| ||||||| |  ||||||||||||||    
T  33516128 tatccctgttacccatctcgtacccgtgtttt 33516097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 47103752 - 47103827
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||| ||| ||||||| |||||||||  |||||||||| |||||||||| ||||||||||||    
T  47103752 ggtatgggttcggggtgggtacatatatccgcgttacccgccccgtacccgtattttgaaattggggaaaacccaa 47103827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 48459495 - 48459569
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||||| ||||||||| || |||||||||||| ||||| |||||||||||  |||||||||||    
T  48459495 ggtatgggttcggggtgggtacctatatacctgttacccgttccatacccatgttttgaaatcggggaaaaccca 48459569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 1724391 - 1724316
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||| |||||||||  ||||||||||| || ||||| |||||||||||  ||||||||||||    
T  1724391 ggtatgggttcggggtgggtacctatataaccgttacccgtcccatacccatgttttgaaatcggggaaaacccaa 1724316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 103 - 170
Target Start/End: Original strand, 37107433 - 37107499
Alignment:
Q  103 ttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||| ||||||||| |||||||||||| || |||||||||||||||||| ||||||||||||    
T  37107433 ttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatt-gggaaaacccaa 37107499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 169
Target Start/End: Complemental strand, 5902695 - 5902621
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||||| ||||||||| |||||||||||| || ||||||||||| || ||  |||||||||||    
T  5902695 ggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaaccca 5902621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 153
Target Start/End: Complemental strand, 6382353 - 6382295
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttga 153  Q
    |||||||||||||||||| ||||||||| |||||||||||| || ||||||||||||||    
T  6382353 ggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttga 6382295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 7608984 - 7609058
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||||| ||||||||| |||||||||||| || ||||||||||| || ||  |||||||||||    
T  7608984 ggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaaccca 7609058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 11028087 - 11028161
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||| ||||||||||| ||||||||| |||||||||||| || |||||||||||||| ||  |||||||||||    
T  11028087 ggtatgagttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaaccca 11028161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 156
Target Start/End: Original strand, 36306750 - 36306860
Alignment:
Q  47 ttatataataggggtaataaattgattttctacatttatgacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccg 145  Q
    |||||||| |||||||||||||||||||||||||||   ||||| |||| || | | |||||| | | ||||||||||||||||| ||||  | ||||||    
T  36306750 ttatataaaaggggtaataaattgattttctacattcgggacgggtttgagtgtagcttcgggttaggtacctatatccccgttaaccgtctcatacccg 36306849  T
Q  146 tgttttgaaat 156  Q
    |||||||||||    
T  36306850 tgttttgaaat 36306860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 154
Target Start/End: Original strand, 42907826 - 42907959
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggataccta 119  Q
    |||| |||||||||||| ||| ||  |||||||| || | || |||||||||||||||||||   ||||  ||||| |||||| ||||||||| ||||||    
T  42907826 aaatgatttagggtttgagtttctatttatataaaagag-tagtaaattgattttctacattcgggacgagtttgggtatgggctcggggtgggtaccta 42907924  T
Q  120 tatccccgttacccgttccgtacccgtgttttgaa 154  Q
    ||||||| |||| ||| ||||| ||||||||||||    
T  42907925 tatccccattactcgtcccgtatccgtgttttgaa 42907959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 44317549 - 44317623
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||||| ||||||||| |||||||||||| || ||||||||||| || ||  |||||||||||    
T  44317549 ggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaaccca 44317623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 95 - 156
Target Start/End: Complemental strand, 30266411 - 30266350
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||||||||||||||||||| |||||||||||||||||| | |||||||| || ||||||    
T  30266411 ggtatgggttcggggtggatacatatatccccgttacccgtcctgtacccgtattatgaaat 30266350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 95 - 156
Target Start/End: Original strand, 30285777 - 30285838
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||||||||||||||||||| |||||||||||||||||| | |||||||| || ||||||    
T  30285777 ggtatgggttcggggtggatacatatatccccgttacccgtcctgtacccgtattatgaaat 30285838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 166
Target Start/End: Complemental strand, 47550459 - 47550363
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaac 166  Q
    ||||| |||||||  ||||| ||||| |||||||||||||||| ||||||||| || ||||||||| || |||||||||||||| ||  ||||||||    
T  47550459 attttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacctgttacccgtcccatacccgtgttttgagatcggggaaaac 47550363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 6482116 - 6482041
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||| ||| ||||| ||| |||| ||| || |||||||||||| ||||| ||||||||||||    
T  6482116 ggtatgggttcggggtgggtacatatataccctttactcgtcccatacccgtgtttttaaattggggaaaacccaa 6482041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 72 - 150
Target Start/End: Complemental strand, 11122974 - 11122895
Alignment:
Q  72 ttttctacatttatgacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttt 150  Q
    |||| |||||||  ||||| |||| ||||||||||||||||| ||||||||| |||||||||||| || |||||||||||    
T  11122974 ttttttacatttgggacgggtttgagtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttt 11122895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 14606006 - 14605931
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||| ||| |||||||| |||||||||  ||||||||| |||||||||  | ||||||||||    
T  14606006 ggtatgggttcggggtgggtacatatatccctgttacccgtctcgtacccgtattttgaaatcggagaaaacccaa 14605931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 31782627 - 31782702
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||| ||| ||||||| ||| ||||||||||||||| || |||||||||| |||||||||  ||||||||||||    
T  31782627 ggtatgagtttggggtgggtacatatatccccgttacctgtaccgtacccgtattttgaaatcggggaaaacccaa 31782702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 21 - 170
Target Start/End: Complemental strand, 35304672 - 35304522
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatt-tatgacggatttgg-tatgggttcggggtggatacct 118  Q
    |||| |||||| ||||| ||| ||  |||||||| |||| |||||||||||||| ||||||| | ||| |  ||||| |||| ||| ||||| | |||||    
T  35304672 aaatgatttagagtttgagtttctttttatataaaaggg-taataaattgatttcctacattctttgatgagtttgggtatgagtttggggtaggtacct 35304574  T
Q  119 atatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||||||||||||||| ||||||   |||||| ||||||| ||||||||||    
T  35304573 atatccccgttacccgtcccgtacttatgttttaaaattagagaaaacccaa 35304522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 169
Target Start/End: Complemental strand, 1866630 - 1866556
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||||||||| ||||||| | ||||||||  ||||||||| |||||||||  || ||||||||    
T  1866630 ggtatgggttcggggtggatacatatatccgcattacccgtctcgtacccgtattttgaaatcgggaaaaaccca 1866556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 156
Target Start/End: Complemental strand, 8843934 - 8843825
Alignment:
Q  47 ttatataataggggtaataaattgattttctacatttatgacggattt-ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccg 145  Q
    |||||| | |||||||||||||| |||||||||||| | ||||| ||| |||||| |||| |||||| || ||||||||||| ||||||| ||| ||| |    
T  8843934 ttatatgaaaggggtaataaattaattttctacattcacgacgggtttgggtatgagttc-gggtgggtatctatatccccgctacccgtcccgcacctg 8843836  T
Q  146 tgttttgaaat 156  Q
    |||||| ||||    
T  8843835 tgttttaaaat 8843825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 156
Target Start/End: Complemental strand, 8856898 - 8856789
Alignment:
Q  47 ttatataataggggtaataaattgattttctacatttatgacggattt-ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccg 145  Q
    |||||| | |||||||||||||| |||||||||||| | ||||| ||| |||||| |||| |||||| || ||||||||||| ||||||| ||| ||| |    
T  8856898 ttatatgaaaggggtaataaattaattttctacattcacgacgggtttgggtatgagttc-gggtgggtatctatatccccgctacccgtcccgcacctg 8856800  T
Q  146 tgttttgaaat 156  Q
    |||||| ||||    
T  8856799 tgttttaaaat 8856789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 169
Target Start/End: Original strand, 21423851 - 21423949
Alignment:
Q  72 ttttctacatttatgacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||| |||||||  ||||| |||| ||||||||| ||||||| ||||||||| ||||||||||||  | ||||||||||| || ||| |||||||||||    
T  21423851 ttttttacatttgggacgggtttgtgtatgggtttggggtgggtacctatatacccgttacccgtctcatacccgtgtttcgagattggggaaaaccca 21423949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 169
Target Start/End: Complemental strand, 55826728 - 55826630
Alignment:
Q  72 ttttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||| |||||||  ||||| ||||| |||||||||||||||| ||||||||| |||||||||||| || |||| |||||| || ||  |||||||||||    
T  55826728 ttttttacatttgggacgggtttggatatgggttcggggtgggtacctatatacccgttacccgtcccatacctgtgtttcgagatcggggaaaaccca 55826630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 168
Target Start/End: Original strand, 3737790 - 3737863
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccc 168  Q
    |||||||||||||| ||| ||| |||| || |||||||||| || |||||||||||||||||| || |||||||    
T  3737790 ggtatgggttcgggatgggtacatataacctcgttacccgtcccatacccgtgttttgaaattgggaaaaaccc 3737863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 156
Target Start/End: Original strand, 21544593 - 21544654
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||||||||||||||| ||| ||||||||| ||||| || |||||||||| |||||||||    
T  21544593 ggtatgggttcggggtgggtacatatatccccattacctgtcccgtacccgtattttgaaat 21544654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 156
Target Start/End: Original strand, 26564845 - 26564906
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    ||||||| |||||||||| ||||||||| |||||||||||| || |||||| ||||||||||    
T  26564845 ggtatggtttcggggtgggtacctatatacccgttacccgtcccatacccgcgttttgaaat 26564906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 156
Target Start/End: Original strand, 32585503 - 32585564
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    ||||||||||| |||||| ||||||||| ||||||||| || || |||||||||||||||||    
T  32585503 ggtatgggttcagggtgggtacctatatacccgttacctgtcccatacccgtgttttgaaat 32585564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 166
Target Start/End: Complemental strand, 9929285 - 9929177
Alignment:
Q  59 ggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaatt 157  Q
    ||||||||||||||||||||| || | ||||  ||||| || | ||||||||||| |||||||||||  ||||||||| |  ||||||| |||||||||     
T  9929285 ggtaataaattgattttctactttcaggacgattttgggtaagagttcggggtgggtacctatatccatgttacccgtactatacccgtattttgaaatc 9929186  T
Q  158 agggaaaac 166  Q
    ||| |||||    
T  9929185 aggaaaaac 9929177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 12825542 - 12825467
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||| ||||| |||||| ||| |||||  ||||||||||| || |||||||||||||||||  ||||||||||||    
T  12825542 ggtataggttcagggtgggtacgtatatatccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaa 12825467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 166
Target Start/End: Complemental strand, 15987343 - 15987272
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaac 166  Q
    |||||||||||||||||| || |||||| |||||||||| | || |||||||||||| ||||  ||||||||    
T  15987343 ggtatgggttcggggtgggtatctatatacccgttacccatcccatacccgtgttttaaaatctgggaaaac 15987272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 150
Target Start/End: Original strand, 43893250 - 43893297
Alignment:
Q  103 ttcggggtggatacctatatccccgttacccgttccgtacccgtgttt 150  Q
    |||||||||||||||||||| |||||||||||| || |||||||||||    
T  43893250 ttcggggtggatacctatatacccgttacccgtcccatacccgtgttt 43893297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 206
Target Start/End: Original strand, 44317635 - 44317678
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttgatt 206  Q
    ||||||| |||||||||||||||||||||||||| |||||||||    
T  44317635 aaacccagtcaaaacggggaaaatccgtcaaattgggtttgatt 44317678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 47 - 167
Target Start/End: Original strand, 10302048 - 10302170
Alignment:
Q  47 ttatataatagg-ggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtaccc 144  Q
    |||||||| ||| ||||| ||| | ||||| |||||||  ||||||| ||| |||||||||||||||| ||| |||| |||||||||||||  | |||||    
T  10302048 ttatataaaaggtggtaaaaaagtaattttttacatttgggacggatatgggtatgggttcggggtgggtacatataaccccgttacccgtctcataccc 10302147  T
Q  145 gtgttttgaaattagggaaaacc 167  Q
    ||  ||||||||  |||||||||    
T  10302148 gtactttgaaatcggggaaaacc 10302170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 21714139 - 21714069
Alignment:
Q  13 tgtaagtaaaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacattt 83  Q
    ||||||| |||| |||||||||||| ||| ||  |||||||| || ||||||||||| |||||||||||||    
T  21714139 tgtaagtgaaatgatttagggtttgagtttctatttatataaaagaggtaataaattaattttctacattt 21714069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 31752470 - 31752544
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||||||||||||||  |||||||| | |||||| |||  | |||||||||||||||||  |||||||||||    
T  31752470 ggtatgggttcggggtgggaacctatatactcgttactcgtctcatacccgtgttttgaaatcggggaaaaccca 31752544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 39046966 - 39047040
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||| || |||| ||||||||| ||||||||  || || ||||||||||| |||||| |||||||||||    
T  39046966 ggtatgggtttggagtgggtacctatatacccgttacatgtcccatacccgtgtttggaaattggggaaaaccca 39047040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 168
Target Start/End: Complemental strand, 32596245 - 32596192
Alignment:
Q  115 acctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccc 168  Q
    |||||||| |||||||||||| || |||||||||||||||||  ||||||||||    
T  32596245 acctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaaccc 32596192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 156
Target Start/End: Complemental strand, 47239466 - 47239405
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    ||||||||||| ||||||  |||||||| |||||||||||| || |||||||||||| ||||    
T  47239466 ggtatgggttcagggtgggaacctatatacccgttacccgtcccatacccgtgttttaaaat 47239405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 208
Target Start/End: Complemental strand, 10574500 - 10574381
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattaggga------aaacccaatcaaaacggggaaaatcc 188  Q
    |||||| |||||||| || ||| |||||||||||||||||| ||||||| || || ||||||  ||||      ||||||| ||||| ||||||||| ||    
T  10574500 ggtatgagttcggggcgggtacatatatccccgttacccgtcccgtacctgtattatgaaatcggggaaaattcaaacccagtcaaatcggggaaaaccc 10574401  T
Q  189 gtcaaattaggtttgatttg 208  Q
    |||||||  || ||||||||    
T  10574400 gtcaaatcgggattgatttg 10574381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 156
Target Start/End: Original strand, 16575088 - 16575187
Alignment:
Q  58 gggtaataaattgattttctacatttatgacg-gatttggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||||||||| ||||| |||||||| |||| | || ||||| ||||||| |||| ||| ||||||| ||||| || | ||||||||| ||||| ||||    
T  16575088 gggtaataaattaattttttacatttaagacgagtttgggtataggttcggagtgggtacttatatcctcgttatccatcccgtacccgcgttttaaaat 16575187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 108
Target Start/End: Original strand, 30034613 - 30034700
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttggtatgggttcggg 108  Q
    |||| |||||||||||||||| ||  ||||||||  | |||| ||||||||||||  |||||   ||||||||||||||| |||||||    
T  30034613 aaatgatttagggtttgggtttctatttatataaatgaggtagtaaattgatttttaacattcgagacggatttggtatgagttcggg 30034700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 82
Target Start/End: Complemental strand, 33616245 - 33616210
Alignment:
Q  47 ttatataataggggtaataaattgattttctacatt 82  Q
    |||||||| |||||||||||||||||||||||||||    
T  33616245 ttatataaaaggggtaataaattgattttctacatt 33616210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 156
Target Start/End: Complemental strand, 15733600 - 15733546
Alignment:
Q  102 gttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    ||||||||||| ||| |||||| |||||||||||  ||||||||| |||||||||    
T  15733600 gttcggggtgggtacatatatctccgttacccgtctcgtacccgtattttgaaat 15733546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 169
Target Start/End: Complemental strand, 31918639 - 31918565
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||||| || |||||| ||| |||| ||| || ||||||||||| || ||  |||||||||||    
T  31918639 ggtatgggttcggggtgggtaactatatacccattactcgtcccatacccgtgtttcgagatcggggaaaaccca 31918565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 31416008 - 31415951
Alignment:
Q  99 tgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||||||||||| ||| |||||||| |||| || | |||||||||| |||||||||    
T  31416008 tgggttcggggtgggtacatatatccctgttatccatcccgtacccgtattttgaaat 31415951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 196
Target Start/End: Original strand, 39086257 - 39086290
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaatt 196  Q
    ||||||||||||||||| ||||||||||||||||    
T  39086257 aaacccaatcaaaacggagaaaatccgtcaaatt 39086290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 40420741 - 40420680
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatt 82  Q
    |||| |||| |||||| |||| ||  |||||||| |||||||||||| ||||||||||||||    
T  40420741 aaatgatttggggttttggtttctatttatataaaaggggtaataaagtgattttctacatt 40420680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 165
Target Start/End: Original strand, 42299805 - 42299872
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaa 165  Q
    |||||||||| |||||| ||||||||| ||||||||||| ||| || ||||||||||||||  |||||||    
T  42299805 gtatgggttcagggtgggtacctatatacccgttacccg-tccata-ccgtgttttgaaatcggggaaaa 42299872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 3505301 - 3505353
Alignment:
Q  114 tacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaac 166  Q
    ||||||||||||||| ||||||| ||||||| | |||| ||||| ||||||||    
T  3505301 tacctatatccccgtaacccgtttcgtacccatattttaaaattggggaaaac 3505353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 156
Target Start/End: Complemental strand, 4741296 - 4741236
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    ||||||||||||||||| ||| |||||||| |||| |||| || ||||| |||||| ||||    
T  4741296 gtatgggttcggggtgggtacttatatccctgttatccgtcccatacccatgttttaaaat 4741236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 31918553 - 31918513
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| ||||||||||||||| |||||||||| ||||||    
T  31918553 aaacccagtcaaaacggggaaaacccgtcaaattgggtttg 31918513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 135
Target Start/End: Original strand, 37349137 - 37349177
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgt 135  Q
    ||||||||||| |||||||||||||||| ||| ||||||||    
T  37349137 ggtatgggttcagggtggatacctatatacccattacccgt 37349177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 166
Target Start/End: Original strand, 37384238 - 37384357
Alignment:
Q  47 ttatataataggggtaataaattgattttctacatttatgacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccg 145  Q
    |||||||| |||| ||||||||||| |||||| ||||  ||||| |||| ||||||||| |||||||||   ||||||| |||| |  ||  ||||||||    
T  37384238 ttatataaaagggataataaattga-tttctatatttgggacgggtttgtgtatgggtttggggtggatgaatatatcctcgttgcatgtcacgtacccg 37384336  T
Q  146 tgttttgaaattagggaaaac 166  Q
    |||||| ||||| | ||||||    
T  37384337 tgttttaaaattggagaaaac 37384357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 39375303 - 39375367
Alignment:
Q  106 ggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||| |||||| |||||||||||| |  ||||||| |||||||||  ||||||| ||||    
T  39375303 ggggtggatatctatatacccgttacccgtcctatacccgtattttgaaatcggggaaaagccaa 39375367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 170
Target Start/End: Complemental strand, 41915054 - 41915002
Alignment:
Q  118 tatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||| | |||||||| | |||||||||  ||||||||||||    
T  41915054 tatatccccgttacccttcccgtacccatattttgaaatcggggaaaacccaa 41915002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 170
Target Start/End: Original strand, 43309520 - 43309572
Alignment:
Q  118 tatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||| ||||||||||||| || |||||||||||||||||  || |||||||||    
T  43309520 tataaccccgttacccgtcccatacccgtgttttgaaatcgggaaaaacccaa 43309572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 43893327 - 43893367
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| ||||||||||||||| |||||||||| ||||||    
T  43893327 aaacccagtcaaaacggggaaaacccgtcaaattgggtttg 43893367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 2e-23; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 3774003 - 3774122
Alignment:
Q  17 agtaaaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttg-gtatgggttcggggtggata 115  Q
    |||||||| |||| | ||||||||| ||  |||||||| ||||||||||||||||||||||| |||   |||||||||| |||||||||| |||||| ||    
T  3774003 agtaaaatgattttgcgtttgggttcctaattatataaaaggggtaataaattgattttctaaattcgggacggatttgagtatgggttcagggtgggta 3774102  T
Q  116 cctatatccccgttacccgt 135  Q
    ||||||||| ||||||||||    
T  3774103 cctatatcctcgttacccgt 3774122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 26 - 167
Target Start/End: Original strand, 3157026 - 3157168
Alignment:
Q  26 atttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggattt-ggtatgggttcggggtggatacctatatcc 124  Q
    ||||||| |||||||| ||  ||||||| ||||||||||||||||||||||||  |||  ||||| ||| ||||| ||||||| |||| |||||||||||    
T  3157026 atttaggatttgggtttctatttatatagtaggggtaataaattgattttctatgtttgggacgggtttgggtataggttcggtgtgggtacctatatcc 3157125  T
Q  125 ccgttacccgttccgtacccgtgttttgaaattagggaaaacc 167  Q
    |||||| |||| || ||||| | |||||||||  |||||||||    
T  3157126 ccgttatccgtcccatacccatattttgaaatcggggaaaacc 3157168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 10072479 - 10072553
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||  |||||||||||    
T  10072479 ggtatgggttcggggtgggtacctatatacccgttacccgttccatacccgtgttttgaaatcggggaaaaccca 10072553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 71 - 166
Target Start/End: Original strand, 30650619 - 30650715
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaac 166  Q
    ||||| |||||||  ||||||||||| |||||||||||||||| ||||||||| |||||||||||| || |||||||||||||| ||| ||||||||    
T  30650619 attttttacatttgggacggatttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagattggggaaaac 30650715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 95 - 156
Target Start/End: Original strand, 32546205 - 32546266
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||    
T  32546205 ggtatgggttcggggtgggtacatatatccccgttacccgttccgtacccgtattttgaaat 32546266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 24425396 - 24425507
Alignment:
Q  98 atgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattaggga------aaacccaatcaaaacggggaaaatccgtc 191  Q
    ||||| || |||||| ||||||||| |||||||||||| || ||||||||||||||||| || ||      ||||||||||||||||| |||||||||||    
T  24425396 atggggtcagggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcagagaaaattcaaacccaatcaaaacggagaaaatccgtc 24425495  T
Q  192 aaattaggtttg 203  Q
    ||||| ||||||    
T  24425496 aaattgggtttg 24425507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 18825952 - 18825877
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||| ||||||||||||| ||||||||| |||||||||||| || |||||||||||||||||  ||||||||||||    
T  18825952 ggtacgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaa 18825877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 95 - 194
Target Start/End: Original strand, 26622964 - 26623069
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa------tcaaaacggggaaaatcc 188  Q
    |||||||||||||||||| ||| ||||| ||| |||||| | || ||||||||||||||||| |||||||||||||      ||||||||||||||||||    
T  26622964 ggtatgggttcggggtgggtacttatatacccattacccatcccatacccgtgttttgaaatcagggaaaacccaaacccactcaaaacggggaaaatcc 26623063  T
Q  189 gtcaaa 194  Q
    | ||||    
T  26623064 gacaaa 26623069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 169
Target Start/End: Complemental strand, 3227025 - 3226952
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||||||||||||| ||||||||| || ||||||||| || |||||||||||||||||  |||||||||||    
T  3227025 gtatgggttcggggtgggtacctatattcctgttacccgtcccatacccgtgttttgaaatcggggaaaaccca 3226952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 168
Target Start/End: Original strand, 18683987 - 18684060
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccc 168  Q
    |||||||||||| ||||||||| |||||||| ||||||||| |||||||||| |||||||||  ||||||||||    
T  18683987 ggtatgggttcgaggtggatacatatatccctgttacccgtcccgtacccgtattttgaaatcggggaaaaccc 18684060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 21 - 165
Target Start/End: Original strand, 29292640 - 29292787
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacg-gatttggtatgggttcggggtgg--atacc 117  Q
    |||||||||||||||||| || ||  |||||||| ||||||| |||||||||||||||||||   |||| | || ||||||||||  ||||||   ||||    
T  29292640 aaataatttagggtttggatttctctttatataaaaggggtagtaaattgattttctacattcgagacgagtttaggtatgggtttagggtgggcgtacc 29292739  T
Q  118 tatatccccgttacccgttccgtacccgtgttttgaaattagggaaaa 165  Q
    |||||||  ||||||| |  |||||||||||||||||||  |||||||    
T  29292740 tatatccatgttacccatctcgtacccgtgttttgaaatcggggaaaa 29292787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 5377098 - 5377173
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||| ||||||||| ||| |||||||| || |||| ||||||||||||  ||||||||||||    
T  5377098 ggtatgggttcggggtgggtacctatataccctttacccgtcccatacctgtgttttgaaatcggggaaaacccaa 5377173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 16866157 - 16866256
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||| |||||||  ||||| ||||| |||||||||||||||| ||||||||| |||||||| ||| || |||||||||||||| ||  |||||||||||    
T  16866157 attttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttactcgtcccatacccgtgttttgagatcggggaaaaccca 16866256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 71 - 169
Target Start/End: Complemental strand, 27850431 - 27850332
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||||||||   ||||| ||||| |||||||||||| ||| ||||||||  |||||||||||| || |||||||||||||||||  |||||||||||    
T  27850431 attttctacattcgggacgggtttgggtatgggttcgggatgggtacctatacacccgttacccgtcccatacccgtgttttgaaatcggggaaaaccca 27850332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 28309505 - 28309580
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||| ||||||||| ||||| ||||| |||||||||||| |||||||||| ||||||||| ||||| |||||||    
T  28309505 ggtatgagttcggggtagatacatatattcccgttacccgtcccgtacccgtattttgaaatcagggagaacccaa 28309580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 38152875 - 38152974
Alignment:
Q  71 attttctacatttatgacggattt-ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||| |||||||  ||||| ||| |||||||||||||||||| |||||||||  |||||| ||||||| ||||| |||||||||||  |||||||||||    
T  38152875 attttttacatttgggacgggtttaggtatgggttcggggtgggtacctatatagccgttatccgttccatacccatgttttgaaatcggggaaaaccca 38152974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 41103644 - 41103743
Alignment:
Q  71 attttctacatttatgacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||| |||||||| ||||| |||  ||||||||||||||||| ||| ||||| ||||||| |||| || |||||||||||||||||  |||||||||||    
T  41103644 attttttacatttaggacgggtttatgtatgggttcggggtgggtacttatatacccgttaaccgtcccatacccgtgttttgaaatcggggaaaaccca 41103743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 21702672 - 21702746
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||||| ||||||||| |||||||||||| || ||||||||||| || ||  |||||||||||    
T  21702672 ggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaaccca 21702746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 45380120 - 45380194
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||||| ||||||||| |||||||||||| || ||||||| |||||||||  || ||||||||    
T  45380120 ggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtattttgaaatcgggaaaaaccca 45380194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 167
Target Start/End: Original strand, 12980390 - 12980462
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacc 167  Q
    |||||||||||||||||| ||| ||||| ||| |||||||| || |||||||||||||||||  |||||||||    
T  12980390 ggtatgggttcggggtgggtacttatatacccattacccgtcccatacccgtgttttgaaatcggggaaaacc 12980462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 39456089 - 39456021
Alignment:
Q  101 ggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||| ||||||||| |||||||||||| || ||||| |||||||||||  |||||||||||    
T  39456089 ggttcggggtgggtacctatatacccgttacccgtcccatacccatgttttgaaatcggggaaaaccca 39456021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 166
Target Start/End: Complemental strand, 45885870 - 45885774
Alignment:
Q  71 attttctacatttatgacggattt-ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaac 166  Q
    ||||| |||||||  ||||||||| |||||||||||||||||| ||||||||| |  ||||||||| || |||||||||||||| ||  ||||||||    
T  45885870 attttttacatttgggacggattttggtatgggttcggggtgggtacctatatacttgttacccgtcccatacccgtgttttgagatcggggaaaac 45885774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 3920551 - 3920626
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||| ||||||||| || |||| |||| || |||| ||||||||||||  ||||||||||||    
T  3920551 ggtatgggttcggggtgggtacctatatacctgttatccgtcccataccagtgttttgaaatcggggaaaacccaa 3920626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 31426021 - 31426096
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||| ||||||||||||||| ||||||||||||||||||  | ||||||| |||| ||||  ||||||||||||    
T  31426021 ggtatgcgttcggggtggatacatatatccccgttacccgtctcatacccgtatttttaaatcggggaaaacccaa 31426096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 35074483 - 35074557
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||| ||| ||||||||| |||||||||||| || |||||||||||| | ||  |||||||||||    
T  35074483 ggtatgggttcgggttgggtacctatatacccgttacccgtcccatacccgtgttttaagatcggggaaaaccca 35074557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 169
Target Start/End: Complemental strand, 38139896 - 38139798
Alignment:
Q  72 ttttctacatttatgacggatttggt-atgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||| |||||||  ||||| |||||| ||||||||||||||| ||| ||||| | | |||||||| || ||| |||||||||||||| |||||||||||    
T  38139896 ttttttacatttgagacgggtttggttatgggttcggggtgggtacttatatactcattacccgtcccatactcgtgttttgaaattggggaaaaccca 38139798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 156
Target Start/End: Complemental strand, 44734462 - 44734376
Alignment:
Q  71 attttctacatttatgacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    ||||| |||||||  ||||||| || ||||||||||||||||| ||||||||| ||| ||||| || || |||||||||||||||||    
T  44734462 attttttacatttgggacggatatgtgtatgggttcggggtgggtacctatatacccattaccggtcccatacccgtgttttgaaat 44734376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 206
Target Start/End: Complemental strand, 43550571 - 43550380
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttg-gtatgggttcggggtggataccta 119  Q
    |||| |||||||||||||||| ||  |||||||  ||||||||||||| || |||| ||||| | ||||| |||| ||||| ||||||| ||  ||| ||    
T  43550571 aaatgatttagggtttgggtttctatttatatagaaggggtaataaatagactttccacattcaggacgggtttgtgtatgagttcggg-tgagtacata 43550473  T
Q  120 tatccccgttacccgttccgtacccgtgttttgaaattagggaaaac------ccaatcaaaacggggaaaatccgtcaaattaggtttgatt 206  Q
    ||||||  ||||| ||  |||| | ||||||| |||   ||||||||      |||||||||| |||||||| ||||||||||||||||||||    
T  43550472 tatccctattaccagtctcgtatctgtgttttaaaaacggggaaaactcaaacccaatcaaaatggggaaaacccgtcaaattaggtttgatt 43550380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 170
Target Start/End: Original strand, 4101518 - 4101630
Alignment:
Q  59 ggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaatt 157  Q
    |||||||||||||||||| ||||| | ||||| || || ||||||||| || ||| ||| |||||||| || |||| | | ||||| ||||||||||||     
T  4101518 ggtaataaattgattttcaacattcaggacgggttagggtatgggttcaggatgggtacatatatccctgtaacccatcctgtacctgtgttttgaaatc 4101617  T
Q  158 agggaaaacccaa 170  Q
    | |||||||||||    
T  4101618 atggaaaacccaa 4101630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 10995914 - 10995839
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||| ||  |||| ||| ||||||||| || ||||||||| |||||||  ||||||||||||    
T  10995914 ggtatgggttcggggtgggtatatataaccctgttacccgtcccatacccgtgtcttgaaatcggggaaaacccaa 10995839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 150
Target Start/End: Complemental strand, 18125308 - 18125253
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttt 150  Q
    |||||| ||||||||||| ||||||||| |||||||||||| || |||||||||||    
T  18125308 ggtatgcgttcggggtgggtacctatatacccgttacccgtcccatacccgtgttt 18125253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 22973401 - 22973476
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||| ||||| |||  |||||||| |||||||| |||||||||| |||||||||   |||||||||||    
T  22973401 ggtatgggttcgaggtgggtacagatatccccattacccgtcccgtacccgtattttgaaatcgtggaaaacccaa 22973476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 27896555 - 27896480
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||| ||||||||| | | | |||| ||||||||||||| || ||||| ||||||||||| |||||||||||||    
T  27896555 ggtatgagttcggggttggtgcatataaccccgttacccgtcccatacccatgttttgaaataagggaaaacccaa 27896480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 7780021 - 7780095
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||| |||||||||||| ||||||||| ||| ||| |||| || |||||||||||||| ||  |||||||||||    
T  7780021 ggtataggttcggggtgggtacctatatacccattatccgtcccatacccgtgttttgagatcggggaaaaccca 7780095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 165
Target Start/End: Complemental strand, 10990929 - 10990871
Alignment:
Q  107 gggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaa 165  Q
    |||||||||||||||||||  |||||||| |||||||||| |||||||||  |||||||    
T  10990929 gggtggatacctatatccctattacccgtcccgtacccgtattttgaaatcggggaaaa 10990871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 17885478 - 17885552
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||| |  |||||||| |||||||||||| || ||||| |||||| ||||  |||||||||||    
T  17885478 ggtatgggttcggggttggaacctatatacccgttacccgtcccatacccatgttttaaaatcggggaaaaccca 17885552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 25905642 - 25905715
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||| ||||||||||| ||||||| | |||||||||||| || |||| ||||||||| ||| |||||||||||    
T  25905642 ggtatgagttcggggtgg-tacctatgtacccgttacccgtcccatacctgtgttttgagattggggaaaaccca 25905715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 43507458 - 43507532
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||||||| |||||| | ||||||| ||||||||||||  | ||||| |||||||||||  |||||||||||    
T  43507458 ggtatgggttcagggtgggtgcctatatacccgttacccgtctcatacccatgttttgaaatcggggaaaaccca 43507532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 153
Target Start/End: Complemental strand, 45708945 - 45708887
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttga 153  Q
    |||||| ||||||||||| ||||||||| |||||||||||| |  ||||||||||||||    
T  45708945 ggtatgagttcggggtgggtacctatatacccgttacccgtccaatacccgtgttttga 45708887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 170
Target Start/End: Complemental strand, 26004556 - 26004479
Alignment:
Q  93 ttggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||||| || |||||| || ||||||||| || |||||  ||||||||||   |||||||||||    
T  26004556 ttggtatgggttcggggtgggtatctatatacctgttacccgtcccatacccaagttttgaaatcgaggaaaacccaa 26004479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 167
Target Start/End: Original strand, 27063347 - 27063419
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacc 167  Q
    |||||| ||||||||||| ||| ||||| |||||||||||| |||||||||| || | ||||  |||||||||    
T  27063347 ggtatgagttcggggtgggtacatatattcccgttacccgtcccgtacccgtattattaaatcggggaaaacc 27063419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 170
Target Start/End: Complemental strand, 42908098 - 42908046
Alignment:
Q  118 tatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||||||| |||||||| |||||||||| |||||||||  ||||||||||||    
T  42908098 tatatccccattacccgtcccgtacccgtattttgaaatcggggaaaacccaa 42908046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 44985912 - 44985872
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||||||||||||| |||||||||||||||||| ||||    
T  44985912 aaacccaatcaaaacggagaaaatccgtcaaattagatttg 44985872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 2630653 - 2630579
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||| || |||||| ||||| |||||| || ||||| |||||| ||||  ||||||||||||    
T  2630653 ggtatgggttcggggtgggtatctatatacccgtcacccgtcccatacccatgtttt-aaatcggggaaaacccaa 2630579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 5565387 - 5565312
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||| ||||||| ||| |||| ||||||||||| | || || ||||  |||||||| |||||||||||||    
T  5565387 ggtatgggttaggggtgggtacatataaccccgttacccatcccatatccgtactttgaaatcagggaaaacccaa 5565312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 16079026 - 16079101
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||| |||| |||||||  |||||||| |||||||||||| || |||||||||||||| ||  | ||||||||||    
T  16079026 ggtataggtttggggtgggcacctatatacccgttacccgtcccatacccgtgttttgagatcggagaaaacccaa 16079101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 149
Target Start/End: Original strand, 17851867 - 17851921
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgtt 149  Q
    |||||||||||||| ||| |||||||||  ||||||||||| || ||||||||||    
T  17851867 ggtatgggttcgggatgggtacctatatatccgttacccgtcccatacccgtgtt 17851921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 167
Target Start/End: Original strand, 26874355 - 26874409
Alignment:
Q  113 atacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacc 167  Q
    |||||||||||   |||||| || ||||||||||||||||||||||| |||||||    
T  26874355 atacctatatcattgttacctgtaccgtacccgtgttttgaaattagagaaaacc 26874409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 166
Target Start/End: Original strand, 33841092 - 33841162
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaac 166  Q
    ||||||||||||||||  ||| |||| ||  ||||||||| || |||||||||||||||||  ||||||||    
T  33841092 gtatgggttcggggtgagtacatataaccatgttacccgtcccatacccgtgttttgaaatcggggaaaac 33841162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 156
Target Start/End: Original strand, 37217986 - 37218079
Alignment:
Q  66 aattgattttctacatttatgacggatttgg--tatgggttcggggtggatacctatatcccc-gttacccgttccgtacccgtgttttgaaat 156  Q
    ||||||||||||| ||| | ||||| |||||  |||| ||||||| | | ||| ||||||||| ||||||||| ||||||| ||||||||||||    
T  37217986 aattgattttctatattcaggacgggtttggggtatgagttcgggcttggtacttatatcccccgttacccgtcccgtacctgtgttttgaaat 37218079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 156
Target Start/End: Original strand, 39316983 - 39317069
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    ||||| |||||||  ||||||| ||| |||| |||| || ||||||| ||||| |||| ||||||| || |||||||||||||||||    
T  39316983 attttttacatttgagacggatatgggtatgagttcaggatggatacatatatacccgctacccgtcccatacccgtgttttgaaat 39317069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 170
Target Start/End: Complemental strand, 44845214 - 44845140
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||||||||||||||| ||  ||||||| | ||| |||| |||||||||| || ||||||  ||||||||||||    
T  44845214 gtatgggttcggggtgggtaaatatatcctcattaaccgtcccgtacccgtattatgaaatcggggaaaacccaa 44845140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 196
Target Start/End: Original strand, 7780107 - 7780140
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaatt 196  Q
    ||||||| ||||||||||||||||||||||||||    
T  7780107 aaacccagtcaaaacggggaaaatccgtcaaatt 7780140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 95 - 156
Target Start/End: Original strand, 27063151 - 27063212
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||| ||||||||||  ||| ||||||||||||| |||| | |||||||| |||||||||    
T  27063151 ggtatgagttcggggtgagtacatatatccccgttatccgtcctgtacccgtattttgaaat 27063212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 169
Target Start/End: Original strand, 48327459 - 48327532
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||| ||||| ||||||||||||||||||  |||| | | |||||||||| |||||||||  | |||||||||    
T  48327459 gtatgtgttcgaggtggatacctatatcccaattactcataccgtacccgtattttgaaatcggagaaaaccca 48327532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 170
Target Start/End: Complemental strand, 3909310 - 3909278
Alignment:
Q  138 cgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||||||||||| |||||||||||||||||||    
T  3909310 cgtacccgtgtttcgaaattagggaaaacccaa 3909278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 16866268 - 16866308
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| ||||||||||||||| |||||||||| ||||||    
T  16866268 aaacccagtcaaaacggggaaaacccgtcaaattgggtttg 16866308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 17885564 - 17885604
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| ||||||||||||||| |||||||||| ||||||    
T  17885564 aaacccagtcaaaacggggaaaacccgtcaaattgggtttg 17885604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 18825860 - 18825820
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| ||||||||||||||| |||||||||| ||||||    
T  18825860 aaacccagtcaaaacggggaaaacccgtcaaattgggtttg 18825820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 21702758 - 21702798
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| |||||||||| ||||||||||||||| ||||||    
T  21702758 aaacccagtcaaaacgggaaaaatccgtcaaattgggtttg 21702798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 30650730 - 30650770
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| ||||||||||||||| |||||||||| ||||||    
T  30650730 aaacccagtcaaaacggggaaaacccgtcaaattgggtttg 30650770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 38139786 - 38139746
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| |||||||||||||||||| ||||||| ||||||    
T  38139786 aaacccagtcaaaacggggaaaatccatcaaattgggtttg 38139746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 169
Target Start/End: Complemental strand, 41741527 - 41741456
Alignment:
Q  97 tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||| ||| |||||| || ||||||| ||||  | |||||||||||||||||  |||||||||||    
T  41741527 tatgggttcggg-tgggtacctacatacccgttatccgtctcatacccgtgttttgaaatcggggaaaaccca 41741456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 6e-21; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 4920809 - 4920908
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||| |||||||  ||||| ||||| |||||||||||||||||||||||||| |||||||||||| || |||||||||||||| ||  |||||||||||    
T  4920809 attttttacatttgggacgggtttgggtatgggttcggggtggatacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaaccca 4920908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 7350567 - 7350448
Alignment:
Q  17 agtaaaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttg-gtatgggttcggggtggata 115  Q
    |||||||| ||||||||||| | |||||  |||||||| || | ||||||||| |||||||||||||  ||||| |||  |||||||||||||||||||     
T  7350567 agtaaaatgatttagggtttcgattactatttatataaaagcgataataaattaattttctacatttgagacgggtttaagtatgggttcggggtggatg 7350468  T
Q  116 cctatatccccgttacccgt 135  Q
    ||||||||||| ||||||||    
T  7350467 cctatatccccattacccgt 7350448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 170
Target Start/End: Original strand, 6810091 - 6810241
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggattt-ggtatgggttcggggtggataccta 119  Q
    |||| ||||| |||||||||| ||  | |||||| ||||| |||||||||||||||  ||||   || || ||| |||||||||||||||||  ||| ||    
T  6810091 aaatcatttaaggtttgggtttctattgatataaaaggggcaataaattgattttcaccattcgggatgggtttgggtatgggttcggggtgagtactta 6810190  T
Q  120 tatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||| |||||||||||||||||||||||| | ||||  ||||||||||||    
T  6810191 tatcctcgttacccgttccgtacccgtgttctaaaatcggggaaaacccaa 6810241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 22 - 166
Target Start/End: Original strand, 8020549 - 8020694
Alignment:
Q  22 aataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttg-gtatgggttcggggtggatacctat 120  Q
    ||||||||||||||| ||||     |||||||| ||||||| ||||||||||||||||||| |  |||| |||| ||||| ||||| | ||  |||||||    
T  8020549 aataatttagggtttaggttttcctttatataaaaggggtagtaaattgattttctacattcagaacgggtttgcgtatgagttcgagatgagtacctat 8020648  T
Q  121 atccccgttacccgttccgtacccgtgttttgaaattagggaaaac 166  Q
    ||||| ||||||| ||| ||||||||||||||||||  ||||||||    
T  8020649 atccctgttacccattcagtacccgtgttttgaaatcggggaaaac 8020694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 16311452 - 16311313
Alignment:
Q  17 agtaaaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggata 115  Q
    |||||||| ||||||||||||| || ||  |||||||| |||| |||||||||||||||| |||||   ||| | ||||  |||||||||||||||| ||    
T  16311452 agtaaaatgatttagggtttggttt-ctatttatataaaagggataataaattgattttcaacattcgagacaggtttgaatatgggttcggggtgggta 16311354  T
Q  116 cctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||||||| |||| ||||  ||||| |||||||||||||    
T  16311353 cctatatccctgttatccgtctcgtactcgtgttttgaaat 16311313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 28569102 - 28569027
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||  |||||||||  ||||||| ||||    
T  28569102 ggtatgggttcggggtgggtacctatatccccgttacccgtcccgtacccgcattttgaaatcggggaaaatccaa 28569027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 63 - 170
Target Start/End: Complemental strand, 38006583 - 38006475
Alignment:
Q  63 ataaattgattttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattaggg 161  Q
    ||||||| |||||| |||||   ||||||||||| |||||||||||||||| |||||||||  | ||||| ||| || ||||||| |||||||||| |||    
T  38006583 ataaattaattttcaacattcgggacggatttgggtatgggttcggggtgggtacctatatatctgttacgcgtcccatacccgtattttgaaattgggg 38006484  T
Q  162 aaaacccaa 170  Q
    |||||||||    
T  38006483 aaaacccaa 38006475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 47 - 170
Target Start/End: Original strand, 38972881 - 38973005
Alignment:
Q  47 ttatataataggggtaataaattgattttctacatttatgacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccg 145  Q
    |||||||| |||| ||||||||||||||| | |||||  || || |||| ||||||||||||||||| ||||||||| |||||||||  | || |||||     
T  38972881 ttatataaaagggttaataaattgattttatgcatttgagatgggtttgagtatgggttcggggtgggtacctatattcccgttacctatcccataccca 38972980  T
Q  146 tgttttgaaattagggaaaacccaa 170  Q
    |||||||||||  || |||||||||    
T  38972981 tgttttgaaatcgggaaaaacccaa 38973005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 23045075 - 23045000
Alignment:
Q  92 tttggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacc 167  Q
    ||||||||||||||||||||| ||| |||||| ||||||||| | |||||||||| |||||||||  |||||||||    
T  23045075 tttggtatgggttcggggtgggtacatatatctccgttacccatcccgtacccgtattttgaaatcggggaaaacc 23045000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 4583127 - 4583201
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||| |||||||  |||||||| |||||||||||| || |||||||||||||||||  |||||||||||    
T  4583127 ggtatgggtttggggtgggaacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaaccca 4583201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 170
Target Start/End: Complemental strand, 40187816 - 40187663
Alignment:
Q  17 agtaaaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggata 115  Q
    |||||||| ||||||| |||   |||||  |||||||| || ||||||||||| |||||||| |||   ||||  ||||| |||| ||| ||| || |||    
T  40187816 agtaaaatgatttaggattttcattactatttatataaaagaggtaataaattaattttctatattcgggacgagtttgggtatgagtttggg-tgaata 40187718  T
Q  116 cctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||| |||||||||||  || ||||||||||||||||| ||||||||||||    
T  40187717 cctatatctccgttacccgtctcgcacccgtgttttgaaattggggaaaacccaa 40187663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 156
Target Start/End: Complemental strand, 27900557 - 27900421
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggataccta 119  Q
    |||| |||||||||||  ||| ||  |||||||| || || |||||||||||||| ||||||   | ||||||||| |||||||||| | ||| ||||||    
T  27900557 aaatgatttagggtttcagtttctatttatataaaagaggaaataaattgattttatacattcggggcggatttgggtatgggttcgagatgggtaccta 27900458  T
Q  120 tatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    ||||| | |||||||| || ||||| |||||||||||    
T  27900457 tatccacattacccgtcccatacccatgttttgaaat 27900421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 156
Target Start/End: Original strand, 29664904 - 29665040
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggataccta 119  Q
    |||| |||||| ||||| ||| ||  ||| |||| ||||||| |||||||||||| ||||||   ||||| ||||| |||| |||||  |||| ||||||    
T  29664904 aaatgatttagagtttgagtttctatttaaataaaaggggtagtaaattgattttgtacattcgggacgggtttgggtatgagttcgaagtgggtaccta 29665003  T
Q  120 tatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||||||||||| |   ||||||||||||||||||    
T  29665004 tatccccgttacccatcatgtacccgtgttttgaaat 29665040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 170
Target Start/End: Complemental strand, 32575068 - 32574944
Alignment:
Q  47 ttatataataggggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccg 145  Q
    |||||||| ||||||||||||||||| |||||||||   | ||| ||||| | |||||||||| ||| ||| |||||||  ||||||| | ||||| | |    
T  32575068 ttatataaaaggggtaataaattgatattctacattcggggcgggtttgggtttgggttcgggatgggtacatatatccatgttacccatcccgtatctg 32574969  T
Q  146 tgttttgaaattagggaaaacccaa 170  Q
    |||||||||||  ||||||||||||    
T  32574968 tgttttgaaatcggggaaaacccaa 32574944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 2681224 - 2681299
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||||||||||||||||||||  |||||||| |||||| | ||||||| || |||||||||  ||||||||||||    
T  2681224 ggtatgggttcggggtggatactcatatccccattacccatcccgtacctgtattttgaaatcggggaaaacccaa 2681299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 10822607 - 10822532
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||| ||| |||| ||||||||||||| |  |||||||||||||||||  | ||||||||||    
T  10822607 ggtatgggttcggggtgggtacatataaccccgttacccgtcctatacccgtgttttgaaatcggagaaaacccaa 10822532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 15890215 - 15890288
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||| ||| ||||||||| |||||||||||| || |||||||||||||||||  | |||||||||    
T  15890215 ggtatgggttcggg-tgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggagaaaaccca 15890288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 169
Target Start/End: Complemental strand, 20973577 - 20973503
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||||| ||||||||| |||||||||| | || |||||||||||  ||||  |||||||||||    
T  20973577 ggtatgggttcggggtgggtacctatatacccgttacccatcccatacccgtgtttgaaaatcggggaaaaccca 20973503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 6092624 - 6092559
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgt 135  Q
    ||||| |||||||  ||||||||||| |||||||||||||||| ||||||||| ||||||||||||    
T  6092624 attttttacatttgggacggatttgggtatgggttcggggtgggtacctatatacccgttacccgt 6092559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 208
Target Start/End: Complemental strand, 35194095 - 35193951
Alignment:
Q  71 attttctacatttatgacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||||||||   ||||| |||| ||||| ||| ||||||| ||||||||| |||||||||||| || |||||||||||| |||  || ||| |||||    
T  35194095 attttctacattcgggacgggtttgagtatgagtttggggtgggtacctatatacccgttacccgtcccatacccgtgttttaaaaacagagaataccca 35193996  T
Q  170 a------tcaaaacggggaaaatccgtcaaattaggtttgatttg 208  Q
    |       ||||||||  ||||||||||||||| |||||||||||    
T  35193995 aatccagccaaaacggaaaaaatccgtcaaattgggtttgatttg 35193951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 17853288 - 17853248
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  17853288 aaacccaatcaaaacggggaaaacccgtcaaattaggtttg 17853248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 33727996 - 33727956
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  33727996 aaacccaatcaaaacggggaaaatccgtcaaattgggtttg 33727956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 12712638 - 12712563
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||| ||||| ||| |||||| |||||| |||| |||||||||| |||||||||  | ||||||||||    
T  12712638 ggtatgggttcgaggtgggtacatatatctccgttatccgtcccgtacccgtattttgaaatcggagaaaacccaa 12712563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 169
Target Start/End: Complemental strand, 12834688 - 12834581
Alignment:
Q  63 ataaattgattttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattaggg 161  Q
    ||||||| ||||| |||||||  ||||| | ||| |||||||||||||| | ||||||||| || ||||||||| || || || |||||||||||| | |    
T  12834688 ataaattaattttttacatttgggacgggtatgggtatgggttcggggtaggtacctatatacctgttacccgtcccatatccatgttttgaaattggag 12834589  T
Q  162 aaaaccca 169  Q
    ||||||||    
T  12834588 aaaaccca 12834581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 96 - 170
Target Start/End: Complemental strand, 12773901 - 12773827
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||||||||| ||||| ||| |||||| |||||| |||| |||||||||| |||||||||  | ||||||||||    
T  12773901 gtatgggttcgaggtgggtacatatatctccgttatccgtcccgtacccgtattttgaaatcggagaaaacccaa 12773827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 170
Target Start/End: Complemental strand, 6156024 - 6155926
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||| |||||| |||||| ||||| |||||||||||||||| ||| ||||| ||  ||||| || |  |||||||||||||||||  |||||||||||    
T  6156024 attttcaacatttgtgacggttttgggtatgggttcggggtgggtacatatatacc--ttacctgtcctatacccgtgttttgaaatcggggaaaaccca 6155927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 156
Target Start/End: Complemental strand, 12866632 - 12866571
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||||||||| ||||| ||||||||| || ||||||||| || ||||| |||||||||||    
T  12866632 ggtatgggttcgcggtgggtacctatatacctgttacccgtcccatacccatgttttgaaat 12866571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 169
Target Start/End: Original strand, 40517815 - 40517888
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||||||||||||| || |||||| |||||||||| | || |||||||||||||  ||  |||||||||||    
T  40517815 gtatgggttcggggtgggtaactatatacccgttacccatcccatacccgtgttttgggatcggggaaaaccca 40517888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 457539 - 457467
Alignment:
Q  10 ctctgtaagtaaaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatt 82  Q
    |||||||||| |||| ||||||| ||| |||| ||  |||||||| ||| |||||||||||||||| ||||||    
T  457539 ctctgtaagtgaaatgatttaggattttggtttctatttatataaaaggtgtaataaattgattttatacatt 457467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 4583213 - 4583253
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||||||||||||||||||| |||||||||| ||||||    
T  4583213 aaacccaatcaaaacggggaaaacccgtcaaattgggtttg 4583253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 135
Target Start/End: Complemental strand, 18116587 - 18116547
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgt 135  Q
    |||||| ||||||||||||||| ||||||||||||||||||    
T  18116587 ggtatgagttcggggtggatacatatatccccgttacccgt 18116547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 156
Target Start/End: Original strand, 35311831 - 35311891
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||||||||| |||| |||||||||  | ||||||||| || |||||||||||||||||    
T  35311831 gtatgggttcggagtgggtacctatatatctgttacccgtcccatacccgtgttttgaaat 35311891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 135
Target Start/End: Original strand, 43523767 - 43523807
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgt 135  Q
    |||||| ||||||||||||||| ||||||||||||||||||    
T  43523767 ggtatgagttcggggtggatacatatatccccgttacccgt 43523807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 13402081 - 13402030
Alignment:
Q  99 tgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttt 150  Q
    ||||||||| |||| |||||| || ||||||||||||||| |||||||||||    
T  13402081 tgggttcggagtgggtacctaaatacccgttacccgttccatacccgtgttt 13402030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 153
Target Start/End: Complemental strand, 33728071 - 33728024
Alignment:
Q  106 ggggtggatacctatatccccgttacccgttccgtacccgtgttttga 153  Q
    ||||||| ||||||||| |||||||||||| || ||||||||||||||    
T  33728071 ggggtgggtacctatatacccgttacccgtcccatacccgtgttttga 33728024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 153
Target Start/End: Complemental strand, 42987585 - 42987502
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttga 153  Q
    ||||| |||||||  ||||| ||||| |||||||||||| ||| |||||||||  ||||||| ||| || ||||||||||||||    
T  42987585 attttttacatttgggacgggtttgggtatgggttcgggatgggtacctatatatccgttacacgtcccatacccgtgttttga 42987502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 169
Target Start/End: Complemental strand, 17853373 - 17853300
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||||||||| |||| || ||||||  ||||||||||| || |||||||| ||||||||  |||||||||||    
T  17853373 ggtatgggttcggagtgggtatctatatatccgttacccgtcccatacccgtg-tttgaaatcggggaaaaccca 17853300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 165
Target Start/End: Original strand, 28045664 - 28045732
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaa 165  Q
    |||||||||||||| ||| ||||||||| |||||||||||| || ||  ||||||||| ||||||||||||    
T  28045664 ggtatgggttcggg-tgggtacctatatacccgttacccgtcccatattcgtgttttg-aattagggaaaa 28045732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 156
Target Start/End: Original strand, 17153137 - 17153238
Alignment:
Q  56 aggggtaataaattgattttctacatttatgacggattt-ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaa 154  Q
    |||||||||||||||||||||||||||   ||||| ||| |||||||||| ||| ||  ||| ||||||   |||| |||| |||||||| |||||| ||    
T  17153137 aggggtaataaattgattttctacattcgggacgggtttgggtatgggtttgggatgagtacatatatcatagttatccgtcccgtacccatgttttaaa 17153236  T
Q  155 at 156  Q
    ||    
T  17153237 at 17153238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 5908683 - 5908643
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    |||||||||||||| |||||||| |||||||||| ||||||    
T  5908683 aaacccaatcaaaatggggaaaacccgtcaaattgggtttg 5908643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 150
Target Start/End: Complemental strand, 5908794 - 5908714
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttt 150  Q
    ||||| |||||||  ||||| ||||| |||||||| ||||||  ||| ||||| |||||||||||| || |||||||||||    
T  5908794 attttttacatttgggacgggtttgggtatgggtttggggtgtgtacatatatacccgttacccgtcccatacccgtgttt 5908714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 16311288 - 16311248
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||||||||| |||| |||| |||||||||||||||||    
T  16311288 aaacccaatcaaagcgggaaaaaaccgtcaaattaggtttg 16311248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 47 - 167
Target Start/End: Complemental strand, 4709 - 4589
Alignment:
Q  47 ttatataataggggtaataaattgattttctacatttatgacggatttggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgt 146  Q
    |||||||| |||||| |||| ||||||||||||||| | |  || || |||||||||||| ||||| || ||||||||| |||||| || || |||||||    
T  4709 ttatataaaaggggttataatttgattttctacattcaaggtggcttaggtatgggttcgtggtgggtagctatatccctgttacctgtcccatacccgt 4610  T
Q  147 gttttgaaattagggaaaacc 167  Q
     |||||||||| |||||||||    
T  4609 attttgaaattggggaaaacc 4589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 33401 - 33476
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||| ||| ||||| |||||||||||| || |||||||||||||||||  ||||||||||||    
T  33401 ggtatgggttcggggtgggtacatatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaa 33476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 1e-18; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 151
Target Start/End: Original strand, 25210311 - 25210442
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatga-cggatttggtatgggttcggggtggataccta 119  Q
    |||| |||||||||||| ||| ||  |||||||| | |||||| ||||||||||||||||||   ||  || ||||||||||||| ||||||| ||| ||    
T  25210311 aaatgatttagggtttgagtttctatttatataaaatgggtaacaaattgattttctacattcgggaggggttttggtatgggtttggggtgggtacata 25210410  T
Q  120 tatccccgttacccgttccgtacccgtgtttt 151  Q
    ||||| |||||||||| || ||||||||||||    
T  25210411 tatcctcgttacccgtcccatacccgtgtttt 25210442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 37106701 - 37106775
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||||||||| |||| ||||||||| |||||||||||| || |||||||||||||||||  |||||||||||    
T  37106701 ggtatgggttcggagtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaaccca 37106775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 72 - 170
Target Start/End: Complemental strand, 35248489 - 35248390
Alignment:
Q  72 ttttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||||||||| | ||||| ||||| |||||||||||||||| ||||| ||||||| |||||||| || ||||||||||||| |||   |||||||||||    
T  35248489 ttttctacattcaggacgggtttgggtatgggttcggggtgggtacctttatcccctttacccgtcccatacccgtgttttgtaatcgtggaaaacccaa 35248390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 203
Target Start/End: Complemental strand, 6027968 - 6027855
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaac------ccaatcaaaacggggaaaatccg 189  Q
    ||||||||||||||||| ||||||||| || |||||||||  | ||||| |||||| ||||  ||||||||      ||||||||||||||||||| |||    
T  6027968 gtatgggttcggggtgggtacctatatacctgttacccgtctcatacccatgttttaaaatcggggaaaacccaaacccaatcaaaacggggaaaacccg 6027869  T
Q  190 tcaaattaggtttg 203  Q
    ||||||| ||||||    
T  6027868 tcaaattgggtttg 6027855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 9632395 - 9632469
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||||||||||||||| ||| |||||||| || ||||||||||| || ||  |||||||||||    
T  9632395 ggtatgggttcggggtggatacctatatacccattacccgtcccatacccgtgtttcgagatcggggaaaaccca 9632469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 30846955 - 30847029
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||||| ||||||||| |||||||||||| || ||||||||||| || ||  |||||||||||    
T  30846955 ggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaaccca 30847029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 167
Target Start/End: Complemental strand, 24414212 - 24414140
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacc 167  Q
    |||||||||||||||||| ||||||||| || ||||||||| || |||||||||||||| ||  |||||||||    
T  24414212 ggtatgggttcggggtgggtacctatatacctgttacccgtcccatacccgtgttttgagatcggggaaaacc 24414140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 97 - 156
Target Start/End: Original strand, 3547177 - 3547236
Alignment:
Q  97 tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||||||||||||| ||| |||||| ||||||||||| |||||||||| |||||||||    
T  3547177 tatgggttcggggtgggtacatatatctccgttacccgtcccgtacccgtattttgaaat 3547236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 6164553 - 6164478
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||| ||||||||||| ||| |||||| ||||||||||| ||||||||   |||||||||| ||||||||||||    
T  6164553 ggtatgagttcggggtgggtacatatatcaccgttacccgtcccgtacccaaattttgaaattggggaaaacccaa 6164478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 71 - 153
Target Start/End: Complemental strand, 8916042 - 8915959
Alignment:
Q  71 attttctacatttatgacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttga 153  Q
    ||||| |||||||  ||||| |||| ||||||||||||||||| ||||||||| || ||||||||| || ||||||||||||||    
T  8916042 attttttacatttgggacgggtttgagtatgggttcggggtgggtacctatatacctgttacccgtcccatacccgtgttttga 8915959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 166
Target Start/End: Complemental strand, 13705441 - 13705370
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaac 166  Q
    |||||||||||||||||| ||||||||| ||||||||| ||  | |||||||||||||||||  ||||||||    
T  13705441 ggtatgggttcggggtgggtacctatatacccgttacctgtctcatacccgtgttttgaaatcggggaaaac 13705370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 166
Target Start/End: Complemental strand, 38342599 - 38342528
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaac 166  Q
    |||||||||||||||||| ||| |||||||||||||||||| ||||| |||| |||| ||||  ||||||||    
T  38342599 ggtatgggttcggggtgggtacatatatccccgttacccgtcccgtatccgtattttaaaatcggggaaaac 38342528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 142
Target Start/End: Original strand, 11958941 - 11959071
Alignment:
Q  13 tgtaagtaaaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacg-gatttggtatgggttcggggtg 111  Q
    ||||||| |||| || |||| |||| ||| |||||||||||| || ||||||||||||||||| |||||| |||| | | || |||||| ||||||||      
T  11958941 tgtaagttaaatgatctaggttttgagtttctgcttatataaaagaggtaataaattgattttatacattcatgatgagtttgggtatgagttcggggca 11959040  T
Q  112 gatacctatatccccgttacccgttccgtac 142  Q
      ||| ||||||| |||||||||| ||||||    
T  11959041 tgtacatatatcctcgttacccgtcccgtac 11959071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 166
Target Start/End: Original strand, 35965298 - 35965414
Alignment:
Q  50 tataataggggtaataaattgattttctacatttatgacggattt-ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgt 148  Q
    ||||| ||||| |||||||||||||||||||||   ||||| ||| ||||||||||||| |||| ||| | ||||||| |||| |  ||| |||||||||    
T  35965298 tataaaaggggcaataaattgattttctacattcgggacgggtttgggtatgggttcggagtgggtacatgtatccccattacac-atccatacccgtgt 35965396  T
Q  149 tttgaaattagggaaaac 166  Q
    ||||||||  ||||||||    
T  35965397 tttgaaatcggggaaaac 35965414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 132
Target Start/End: Original strand, 13531883 - 13531995
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttg-gtatgggttcggggtggataccta 119  Q
    |||| |||||||||||| ||| ||  |||||||| | || ||||||||||||||||||||| |  | ||| |||| || ||||||||||||| |||| ||    
T  13531883 aaatgatttagggtttgagtttctatttatataaaatggataataaattgattttctacatgtggggcgggtttgagtgtgggttcggggtgaatacata 13531982  T
Q  120 tatccccgttacc 132  Q
    ||||| |||||||    
T  13531983 tatcctcgttacc 13531995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 30978936 - 30979009
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||||||| ||||||| ||||| ||  ||||||||||| |||||||||  || |||||||||    
T  30978936 ggtatgggttcggggtggatacatatatcctcgttatcc--tccgtacccgtattttgaaatcgggaaaaacccaa 30979009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 36128100 - 36128060
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  36128100 aaacccagtcaaaacggggaaaatccgtcaaattaggtttg 36128060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 37999467 - 37999566
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||| |||||||  ||||| ||||| |||| ||||||||||| ||| ||||| ||||||||||||  | |||||||||||||| ||  |||||||||||    
T  37999467 attttttacatttgggacgggtttgggtatgagttcggggtgggtacttatatacccgttacccgtctcatacccgtgttttgagatcggggaaaaccca 37999566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 166
Target Start/End: Original strand, 43371562 - 43371633
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaac 166  Q
    |||||| ||| ||||||| ||| |||||||||||||||||| |||||||||| |||| ||||  ||||||||    
T  43371562 ggtatgagtttggggtgggtacatatatccccgttacccgtcccgtacccgtattttaaaatcggggaaaac 43371633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 169
Target Start/End: Complemental strand, 7314728 - 7314654
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||||||||||||||  |||||||| |||||||||||| || ||| ||| |||| ||||  |||||||||||    
T  7314728 ggtatgggttcggggtgggaacctatatacccgttacccgtcccatactcgtattttaaaatcggggaaaaccca 7314654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 14331536 - 14331610
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||||||||| |||| ||| |||||||||||||||||| || |||| || |||| ||||  |||||||||||    
T  14331536 ggtatgggttcggagtgggtacatatatccccgttacccgtcccatacctgtatttttaaataggggaaaaccca 14331610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 165
Target Start/End: Complemental strand, 37472839 - 37472769
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaa 165  Q
    ||||||||||||  |||| |||||| || |||||||||||| || |||||||||||||||||  |||||||    
T  37472839 ggtatgggttcgaagtgggtacctaaatacccgttacccgtcccatacccgtgttttgaaatcggggaaaa 37472769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 169
Target Start/End: Complemental strand, 10208509 - 10208436
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||||||||||| | |||||||||  || |||||||| || |||||||||||| | ||| |||||||||||    
T  10208509 gtatgggttcggggtaggtacctatatatccattacccgtcccatacccgtgttttaagattggggaaaaccca 10208436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 156
Target Start/End: Original strand, 18485657 - 18485718
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    ||||||||||| |||||| ||| |||||||||||||||||| | |||||||| |||| ||||    
T  18485657 ggtatgggttcagggtgggtacatatatccccgttacccgtactgtacccgtattttaaaat 18485718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 170
Target Start/End: Complemental strand, 35510533 - 35510448
Alignment:
Q  86 gacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||| |||||  |||| ||||||||||||||||| | ||||||||   ||| | ||||||||||||| ||||||||||||    
T  35510533 gacggatttgagtatgaattcgaggtggatacctatatcctcattacccgtcttgtatctgtgttttgaaattggggaaaacccaa 35510448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 166
Target Start/End: Original strand, 45256798 - 45256903
Alignment:
Q  62 aataaattgattttctacatttatgacggattt-ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagg 160  Q
    |||||| | ||||| |||||||  ||||| ||| |||||||||||||||||| ||| ||||| ||| ||| ||||  | |||||||||||||||||  ||    
T  45256798 aataaagtaattttttacatttgggacgggtttaggtatgggttcggggtgggtacttatatacccattaaccgtctcatacccgtgttttgaaatcggg 45256897  T
Q  161 gaaaac 166  Q
    ||||||    
T  45256898 gaaaac 45256903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 122
Target Start/End: Original strand, 10920629 - 10920681
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatat 122  Q
    ||||| |||||||  ||||||||||| ||||||||||||||||||||||||||    
T  10920629 attttttacatttgggacggatttgggtatgggttcggggtggatacctatat 10920681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 24414126 - 24414086
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||||||||||||||||||| |||||||||| ||||||    
T  24414126 aaacccaatcaaaacggggaaaacccgtcaaattgggtttg 24414086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 34458906 - 34458838
Alignment:
Q  102 gttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||  |||||| ||||||  | |||| ||||||||||||||||||||||||| | ||||||||||    
T  34458906 gttcgggacggatacatatatcttcattactcgttccgtacccgtgttttgaaattggagaaaacccaa 34458838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 42798067 - 42798011
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttg 152  Q
    ||||||||||||||||| ||| ||||| ||||||||||||  | |||||||||||||    
T  42798067 gtatgggttcggggtgggtacttatatacccgttacccgtctcatacccgtgttttg 42798011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 15546753 - 15546828
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||||||||| |||||| ||  |||| ||  ||||||||| || |||||||||||||||||  ||||||||||||    
T  15546753 ggtatgggttcagggtgggtatatataaccatgttacccgtcccatacccgtgttttgaaatcggggaaaacccaa 15546828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 22900803 - 22900878
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||| ||||||||||| ||  |||| ||||||||| ||| || |||||||||||||||||  || |||||||||    
T  22900803 ggtatgagttcggggtgggtatatataaccccgttactcgtcccatacccgtgttttgaaatcgggaaaaacccaa 22900878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 156
Target Start/End: Original strand, 30696863 - 30696994
Alignment:
Q  26 atttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatga-cggatttggtatgggttcggggtggatacctatatcc 124  Q
    ||||||||||||  || ||  |||||||| | |||||||||||||||||| |||||||  ||  || || |||||| ||||||||||| ||| ||||||     
T  30696863 atttagggtttgaatttctatttatataaaatgggtaataaattgattttttacatttgggataggtttgggtatgagttcggggtgggtacatatatct 30696962  T
Q  125 ccgttacccgttccgtacccgtgttttgaaat 156  Q
    | |||||||||  |||| || |||||| ||||    
T  30696963 ctgttacccgtctcgtatccatgttttaaaat 30696994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 150
Target Start/End: Complemental strand, 36128186 - 36128131
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttt 150  Q
    |||||||||||||||||  ||||||||| |||||||||| | || |||||||||||    
T  36128186 ggtatgggttcggggtgagtacctatatacccgttacccatcccatacccgtgttt 36128131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 156
Target Start/End: Original strand, 45115569 - 45115628
Alignment:
Q  97 tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||||||||| ||| ||||||||| || |||||||||  | |||||||||||||||||    
T  45115569 tatgggttcgggatgggtacctatatacctgttacccgtctcatacccgtgttttgaaat 45115628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 112
Target Start/End: Complemental strand, 29656864 - 29656798
Alignment:
Q  47 ttatataataggggtaataaattgattttctacatttatgacggatttg-gtatgggttcggggtgg 112  Q
    |||||||| |||| ||||||||||||||| |||||||  ||| |||||| ||||| |||||||||||    
T  29656864 ttatataaaagggataataaattgattttatacatttgagacagatttgtgtatgagttcggggtgg 29656798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 196
Target Start/End: Complemental strand, 7314642 - 7314609
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaatt 196  Q
    ||||||| ||||||||||||||||||||||||||    
T  7314642 aaacccagtcaaaacggggaaaatccgtcaaatt 7314609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 153
Target Start/End: Original strand, 13830746 - 13830802
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttga 153  Q
    ||||||||||||||||| ||| ||||| ||||||| |||| || ||||||||||||||    
T  13830746 gtatgggttcggggtgggtacttatatacccgtta-ccgtcccatacccgtgttttga 13830802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 30847041 - 30847081
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| ||||||||||||||| |||||||||| ||||||    
T  30847041 aaacccagtcaaaacggggaaaacccgtcaaattgggtttg 30847081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 44746103 - 44746063
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    |||| |||||||||||||||||| |||||||||| ||||||    
T  44746103 aaactcaatcaaaacggggaaaacccgtcaaattgggtttg 44746063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 170
Target Start/End: Complemental strand, 44746222 - 44746114
Alignment:
Q  63 ataaattgattttctacatttatgacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattaggg 161  Q
    ||||| |||||||||||||||  ||||| |||| ||||| ||| |  |||| ||| ||||| ||| |||||||| || ||  |||||||||||||  |||    
T  44746222 ataaagtgattttctacatttgggacgggtttgagtatgagtttgaagtgggtacatatatacccattacccgtcccatattcgtgttttgaaatcgggg 44746123  T
Q  162 aaaacccaa 170  Q
    |||||||||    
T  44746122 aaaacccaa 44746114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 128201 - 128126
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||| ||| ||||||||| |||||||| |||||||||| || ||||||| |  |||||||||    
T  128201 ggtatgggttcggggtgggtacatatatccccattacccgtcccgtacccgtattatgaaattggaaaaaacccaa 128126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 146
Target Start/End: Complemental strand, 105549 - 105498
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgt 146  Q
    |||||||||||||||||| ||| |||||||| ||||||||| ||||||||||    
T  105549 ggtatgggttcggggtgggtacatatatccctgttacccgtcccgtacccgt 105498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 211372 - 211447
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||| ||| |||||||| |||||||||  ||||||||| |||||||||  | ||||||||||    
T  211372 ggtatgggttcggggtgggtacatatatccctgttacccgtctcgtacccgtattttgaaatcggagaaaacccaa 211447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 96 - 170
Target Start/End: Original strand, 2978 - 3052
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||||||||||||||| ||| |||||||| |||| |||| | |||||||| |||||||||  ||||||||||||    
T  2978 gtatgggttcggggtgggtacatatatcccagttatccgtcctgtacccgtattttgaaatcggggaaaacccaa 3052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 90580 - 90679
Alignment:
Q  71 attttctacatttatgacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||| |||| | |||| ||||| |||||||||||||| || |||| |||| ||||||| ||||  | |||||||||||||||||  |||||||||||    
T  90580 attttctgcattcaggacgaatttgtgtatgggttcggggagggtaccaatatacccgttaaccgtctcatacccgtgttttgaaatcggggaaaaccca 90679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 196
Target Start/End: Original strand, 90685 - 90718
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaatt 196  Q
    ||||||| ||||||||||||||||||||||||||    
T  90685 aaacccagtcaaaacggggaaaatccgtcaaatt 90718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 55977 - 55903
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||||| |||||||||| ||| |||||||| ||||||| | | |||||| | |||||||||| ||||||||||||    
T  55977 ggtatggattcggggtgggtacatatatccctgttaccc-tcctgtacccatattttgaaattggggaaaacccaa 55903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1322 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold1322
Description:

Target: scaffold1322; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 1070 - 1119
Alignment:
Q  47 ttatataataggggtaataaattgattttctacatttatgacggatttgg 96  Q
    |||||||| | |||||||||||| |||||||||||| ||||||| |||||    
T  1070 ttatataaaatgggtaataaattaattttctacattcatgacgggtttgg 1119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 17530 - 17474
Alignment:
Q  100 gggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    ||||| ||| |||||||||||||||||||||||| | | ||| || |||||||||||    
T  17530 gggtttgggatggatacctatatccccgttacccttcctgtatccatgttttgaaat 17474  T

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Target: scaffold0198 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 156
Target Start/End: Complemental strand, 20854 - 20758
Alignment:
Q  61 taataaattgattttctacatttatgacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    ||||||||||||||| ||||||    |||| |||| ||||||||||| ||||||||  ||||||||| ||||||||  | ||| || ||||||||||    
T  20854 taataaattgattttttacattcggaacgggtttgagtatgggttcgaggtggatatttatatccccattacccgtctcatactcgagttttgaaat 20758  T

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