View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15531_low_31 (Length: 221)

Name: NF15531_low_31
Description: NF15531
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15531_low_31
NF15531_low_31
[»] chr6 (40 HSPs)
chr6 (1-206)||(32959774-32959985)
chr6 (95-197)||(8320767-8320875)
chr6 (21-203)||(9402522-9402710)
chr6 (21-167)||(13769005-13769152)
chr6 (95-170)||(28079701-28079776)
chr6 (51-166)||(256501-256617)
chr6 (95-208)||(14410817-14410935)
chr6 (47-170)||(20349023-20349147)
chr6 (95-195)||(29199859-29199965)
chr6 (71-169)||(32853827-32853926)
chr6 (96-206)||(7393850-7393966)
chr6 (96-169)||(32532549-32532622)
chr6 (71-169)||(12141368-12141467)
chr6 (71-169)||(12309555-12309654)
chr6 (47-169)||(34346011-34346134)
chr6 (95-169)||(2367334-2367408)
chr6 (95-169)||(5863389-5863463)
chr6 (71-169)||(27738755-27738854)
chr6 (95-169)||(3483929-3484003)
chr6 (71-196)||(24602829-24602961)
chr6 (96-196)||(14506095-14506201)
chr6 (103-170)||(20610987-20611054)
chr6 (98-153)||(24225709-24225764)
chr6 (95-150)||(27534692-27534747)
chr6 (106-169)||(34178335-34178398)
chr6 (98-156)||(9442441-9442499)
chr6 (95-169)||(10142524-10142598)
chr6 (71-156)||(11762428-11762514)
chr6 (95-169)||(32053096-32053170)
chr6 (95-164)||(9458671-9458740)
chr6 (47-83)||(1947884-1947920)
chr6 (95-155)||(10925463-10925523)
chr6 (163-203)||(30816352-30816392)
chr6 (95-166)||(12678103-12678174)
chr6 (99-169)||(15498336-15498406)
chr6 (163-196)||(27534778-27534811)
chr6 (163-203)||(3483877-3483917)
chr6 (163-203)||(5863337-5863377)
chr6 (163-203)||(10188034-10188074)
chr6 (163-203)||(32053176-32053216)
[»] chr3 (48 HSPs)
chr3 (21-156)||(30904835-30904970)
chr3 (95-169)||(44639282-44639356)
chr3 (96-169)||(7469784-7469857)
chr3 (46-170)||(42243345-42243470)
chr3 (95-166)||(23580835-23580906)
chr3 (71-169)||(44172609-44172708)
chr3 (71-169)||(44179309-44179408)
chr3 (95-166)||(48305650-48305721)
chr3 (95-169)||(23546948-23547022)
chr3 (95-169)||(48390823-48390897)
chr3 (92-156)||(3385875-3385939)
chr3 (95-170)||(4016049-4016124)
chr3 (95-170)||(4557310-4557385)
chr3 (95-170)||(10043287-10043362)
chr3 (95-170)||(42758382-42758457)
chr3 (71-169)||(49580047-49580146)
chr3 (96-166)||(22535850-22535920)
chr3 (95-169)||(34025962-34026036)
chr3 (95-169)||(39655279-39655353)
chr3 (72-169)||(44953441-44953539)
chr3 (95-153)||(52198163-52198221)
chr3 (96-166)||(53631913-53631983)
chr3 (96-153)||(17146172-17146229)
chr3 (96-169)||(23154071-23154143)
chr3 (96-169)||(29842317-29842389)
chr3 (71-167)||(44106800-44106897)
chr3 (61-156)||(4553163-4553259)
chr3 (95-150)||(29284344-29284399)
chr3 (95-170)||(30616286-30616361)
chr3 (95-166)||(34154422-34154493)
chr3 (95-169)||(44252755-44252829)
chr3 (72-156)||(34119640-34119725)
chr3 (96-153)||(52572618-52572675)
chr3 (163-203)||(39655227-39655267)
chr3 (98-166)||(54317155-54317223)
chr3 (71-153)||(39728654-39728737)
chr3 (163-206)||(44252841-44252884)
chr3 (163-208)||(831096-831141)
chr3 (163-196)||(34154508-34154541)
chr3 (163-196)||(39728765-39728798)
chr3 (163-196)||(48390778-48390811)
chr3 (163-203)||(7469732-7469772)
chr3 (163-203)||(10371227-10371267)
chr3 (163-203)||(29858529-29858569)
chr3 (163-203)||(34119750-34119790)
chr3 (163-203)||(42758468-42758508)
chr3 (163-203)||(44953389-44953429)
chr3 (114-170)||(49025707-49025763)
[»] chr8 (45 HSPs)
chr8 (21-170)||(8545354-8545504)
chr8 (95-203)||(17469263-17469377)
chr8 (21-156)||(29918540-29918676)
chr8 (63-166)||(45236040-45236144)
chr8 (71-169)||(27932396-27932495)
chr8 (46-170)||(14155490-14155615)
chr8 (21-156)||(30903979-30904115)
chr8 (56-170)||(9642356-9642471)
chr8 (63-206)||(14186295-14186445)
chr8 (95-169)||(24927957-24928031)
chr8 (47-152)||(28345450-28345556)
chr8 (95-169)||(32303069-32303143)
chr8 (21-82)||(6388599-6388660)
chr8 (95-168)||(15068595-15068667)
chr8 (86-203)||(36131883-36132007)
chr8 (67-170)||(14687378-14687482)
chr8 (22-170)||(17084112-17084263)
chr8 (98-170)||(20399603-20399675)
chr8 (86-172)||(43113629-43113716)
chr8 (47-156)||(5700315-5700425)
chr8 (92-170)||(10297463-10297541)
chr8 (71-166)||(24870033-24870129)
chr8 (71-166)||(40248380-40248476)
chr8 (86-156)||(24568936-24569007)
chr8 (71-153)||(34777049-34777132)
chr8 (95-169)||(1063515-1063589)
chr8 (95-169)||(29108828-29108902)
chr8 (95-169)||(39445582-39445656)
chr8 (95-144)||(2075866-2075915)
chr8 (95-156)||(27777217-27777278)
chr8 (95-170)||(1012627-1012701)
chr8 (95-170)||(30481426-30481501)
chr8 (95-170)||(37960967-37961042)
chr8 (95-170)||(40789597-40789672)
chr8 (47-156)||(9476032-9476142)
chr8 (21-170)||(12468224-12468373)
chr8 (163-196)||(5858613-5858646)
chr8 (163-203)||(2075788-2075828)
chr8 (163-203)||(24569032-24569071)
chr8 (163-203)||(24928043-24928083)
chr8 (163-203)||(27932507-27932547)
chr8 (163-203)||(29108776-29108816)
chr8 (163-203)||(30481375-30481415)
chr8 (163-203)||(32303155-32303195)
chr8 (106-170)||(35215555-35215618)
[»] chr1 (46 HSPs)
chr1 (21-170)||(48125688-48125838)
chr1 (21-170)||(39219192-39219342)
chr1 (46-170)||(13798197-13798322)
chr1 (71-169)||(24236767-24236866)
chr1 (95-196)||(10450038-10450139)
chr1 (92-169)||(23490777-23490854)
chr1 (96-156)||(10778586-10778646)
chr1 (97-169)||(16408953-16409025)
chr1 (96-167)||(3627993-3628064)
chr1 (71-169)||(29936400-29936499)
chr1 (95-170)||(34673287-34673362)
chr1 (95-169)||(36187226-36187300)
chr1 (95-169)||(50426667-50426741)
chr1 (96-169)||(19572518-19572591)
chr1 (95-150)||(28297943-28297998)
chr1 (95-170)||(44615480-44615555)
chr1 (95-170)||(44793014-44793089)
chr1 (95-166)||(49250782-49250853)
chr1 (95-169)||(5181048-5181122)
chr1 (95-165)||(9982900-9982970)
chr1 (95-169)||(17134956-17135030)
chr1 (72-156)||(12494995-12495080)
chr1 (95-156)||(23058475-23058536)
chr1 (95-170)||(16237309-16237384)
chr1 (95-170)||(34085244-34085319)
chr1 (95-196)||(16433140-16433244)
chr1 (95-169)||(18354086-18354160)
chr1 (100-168)||(19003673-19003741)
chr1 (163-203)||(20774661-20774701)
chr1 (163-203)||(23968674-23968714)
chr1 (97-153)||(42439692-42439748)
chr1 (163-206)||(16409037-16409080)
chr1 (114-169)||(24710875-24710930)
chr1 (21-151)||(41476976-41477107)
chr1 (71-153)||(51421842-51421925)
chr1 (47-156)||(8880408-8880518)
chr1 (95-157)||(16903532-16903594)
chr1 (51-156)||(25154846-25154952)
chr1 (116-170)||(33293536-33293590)
chr1 (96-166)||(35069898-35069968)
chr1 (100-170)||(35936834-35936904)
chr1 (95-156)||(34060044-34060105)
chr1 (95-156)||(42707856-42707916)
chr1 (163-203)||(19572466-19572506)
chr1 (96-132)||(23966883-23966919)
chr1 (71-170)||(29871290-29871390)
[»] chr4 (64 HSPs)
chr4 (21-156)||(21956834-21956969)
chr4 (47-170)||(25298839-25298963)
chr4 (26-170)||(25941082-25941227)
chr4 (64-170)||(19883062-19883169)
chr4 (95-170)||(29527826-29527901)
chr4 (21-151)||(33516097-33516228)
chr4 (95-170)||(47103752-47103827)
chr4 (95-169)||(48459495-48459569)
chr4 (95-170)||(1724316-1724391)
chr4 (103-170)||(37107433-37107499)
chr4 (95-169)||(5902621-5902695)
chr4 (95-153)||(6382295-6382353)
chr4 (95-169)||(7608984-7609058)
chr4 (95-169)||(11028087-11028161)
chr4 (47-156)||(36306750-36306860)
chr4 (21-154)||(42907826-42907959)
chr4 (95-169)||(44317549-44317623)
chr4 (95-156)||(30266350-30266411)
chr4 (95-156)||(30285777-30285838)
chr4 (71-166)||(47550363-47550459)
chr4 (95-170)||(6482041-6482116)
chr4 (72-150)||(11122895-11122974)
chr4 (95-170)||(14605931-14606006)
chr4 (95-170)||(31782627-31782702)
chr4 (21-170)||(35304522-35304672)
chr4 (95-169)||(1866556-1866630)
chr4 (47-156)||(8843825-8843934)
chr4 (47-156)||(8856789-8856898)
chr4 (72-169)||(21423851-21423949)
chr4 (72-169)||(55826630-55826728)
chr4 (95-168)||(3737790-3737863)
chr4 (95-156)||(21544593-21544654)
chr4 (95-156)||(26564845-26564906)
chr4 (95-156)||(32585503-32585564)
chr4 (59-166)||(9929177-9929285)
chr4 (95-170)||(12825467-12825542)
chr4 (95-166)||(15987272-15987343)
chr4 (103-150)||(43893250-43893297)
chr4 (163-206)||(44317635-44317678)
chr4 (47-167)||(10302048-10302170)
chr4 (13-83)||(21714069-21714139)
chr4 (95-169)||(31752470-31752544)
chr4 (95-169)||(39046966-39047040)
chr4 (115-168)||(32596192-32596245)
chr4 (95-156)||(47239405-47239466)
chr4 (95-208)||(10574381-10574500)
chr4 (58-156)||(16575088-16575187)
chr4 (21-108)||(30034613-30034700)
chr4 (47-82)||(33616210-33616245)
chr4 (102-156)||(15733546-15733600)
chr4 (95-169)||(31918565-31918639)
chr4 (99-156)||(31415951-31416008)
chr4 (163-196)||(39086257-39086290)
chr4 (21-82)||(40420680-40420741)
chr4 (96-165)||(42299805-42299872)
chr4 (114-166)||(3505301-3505353)
chr4 (96-156)||(4741236-4741296)
chr4 (163-203)||(31918513-31918553)
chr4 (95-135)||(37349137-37349177)
chr4 (47-166)||(37384238-37384357)
chr4 (106-170)||(39375303-39375367)
chr4 (118-170)||(41915002-41915054)
chr4 (118-170)||(43309520-43309572)
chr4 (163-203)||(43893327-43893367)
[»] chr7 (63 HSPs)
chr7 (17-135)||(3774003-3774122)
chr7 (26-167)||(3157026-3157168)
chr7 (95-169)||(10072479-10072553)
chr7 (71-166)||(30650619-30650715)
chr7 (95-156)||(32546205-32546266)
chr7 (98-203)||(24425396-24425507)
chr7 (95-170)||(18825877-18825952)
chr7 (95-194)||(26622964-26623069)
chr7 (96-169)||(3226952-3227025)
chr7 (95-168)||(18683987-18684060)
chr7 (21-165)||(29292640-29292787)
chr7 (95-170)||(5377098-5377173)
chr7 (71-169)||(16866157-16866256)
chr7 (71-169)||(27850332-27850431)
chr7 (95-170)||(28309505-28309580)
chr7 (71-169)||(38152875-38152974)
chr7 (71-169)||(41103644-41103743)
chr7 (95-169)||(21702672-21702746)
chr7 (95-169)||(45380120-45380194)
chr7 (95-167)||(12980390-12980462)
chr7 (101-169)||(39456021-39456089)
chr7 (71-166)||(45885774-45885870)
chr7 (95-170)||(3920551-3920626)
chr7 (95-170)||(31426021-31426096)
chr7 (95-169)||(35074483-35074557)
chr7 (72-169)||(38139798-38139896)
chr7 (71-156)||(44734376-44734462)
chr7 (21-206)||(43550380-43550571)
chr7 (59-170)||(4101518-4101630)
chr7 (95-170)||(10995839-10995914)
chr7 (95-150)||(18125253-18125308)
chr7 (95-170)||(22973401-22973476)
chr7 (95-170)||(27896480-27896555)
chr7 (95-169)||(7780021-7780095)
chr7 (107-165)||(10990871-10990929)
chr7 (95-169)||(17885478-17885552)
chr7 (95-169)||(25905642-25905715)
chr7 (95-169)||(43507458-43507532)
chr7 (95-153)||(45708887-45708945)
chr7 (93-170)||(26004479-26004556)
chr7 (95-167)||(27063347-27063419)
chr7 (118-170)||(42908046-42908098)
chr7 (163-203)||(44985872-44985912)
chr7 (95-170)||(2630579-2630653)
chr7 (95-170)||(5565312-5565387)
chr7 (95-170)||(16079026-16079101)
chr7 (95-149)||(17851867-17851921)
chr7 (113-167)||(26874355-26874409)
chr7 (96-166)||(33841092-33841162)
chr7 (66-156)||(37217986-37218079)
chr7 (71-156)||(39316983-39317069)
chr7 (96-170)||(44845140-44845214)
chr7 (163-196)||(7780107-7780140)
chr7 (95-156)||(27063151-27063212)
chr7 (96-169)||(48327459-48327532)
chr7 (138-170)||(3909278-3909310)
chr7 (163-203)||(16866268-16866308)
chr7 (163-203)||(17885564-17885604)
chr7 (163-203)||(18825820-18825860)
chr7 (163-203)||(21702758-21702798)
chr7 (163-203)||(30650730-30650770)
chr7 (163-203)||(38139746-38139786)
chr7 (97-169)||(41741456-41741527)
[»] chr5 (42 HSPs)
chr5 (71-169)||(4920809-4920908)
chr5 (17-135)||(7350448-7350567)
chr5 (21-170)||(6810091-6810241)
chr5 (22-166)||(8020549-8020694)
chr5 (17-156)||(16311313-16311452)
chr5 (95-170)||(28569027-28569102)
chr5 (63-170)||(38006475-38006583)
chr5 (47-170)||(38972881-38973005)
chr5 (92-167)||(23045000-23045075)
chr5 (95-169)||(4583127-4583201)
chr5 (17-170)||(40187663-40187816)
chr5 (21-156)||(27900421-27900557)
chr5 (21-156)||(29664904-29665040)
chr5 (47-170)||(32574944-32575068)
chr5 (95-170)||(2681224-2681299)
chr5 (95-170)||(10822532-10822607)
chr5 (95-169)||(15890215-15890288)
chr5 (95-169)||(20973503-20973577)
chr5 (71-135)||(6092559-6092624)
chr5 (71-208)||(35193951-35194095)
chr5 (163-203)||(17853248-17853288)
chr5 (163-203)||(33727956-33727996)
chr5 (95-170)||(12712563-12712638)
chr5 (63-169)||(12834581-12834688)
chr5 (96-170)||(12773827-12773901)
chr5 (71-170)||(6155926-6156024)
chr5 (95-156)||(12866571-12866632)
chr5 (96-169)||(40517815-40517888)
chr5 (10-82)||(457467-457539)
chr5 (163-203)||(4583213-4583253)
chr5 (95-135)||(18116547-18116587)
chr5 (96-156)||(35311831-35311891)
chr5 (95-135)||(43523767-43523807)
chr5 (99-150)||(13402030-13402081)
chr5 (106-153)||(33728024-33728071)
chr5 (71-153)||(42987502-42987585)
chr5 (95-169)||(17853300-17853373)
chr5 (95-165)||(28045664-28045732)
chr5 (56-156)||(17153137-17153238)
chr5 (163-203)||(5908643-5908683)
chr5 (71-150)||(5908714-5908794)
chr5 (163-203)||(16311248-16311288)
[»] scaffold0244 (1 HSPs)
scaffold0244 (47-167)||(4589-4709)
[»] scaffold0036 (1 HSPs)
scaffold0036 (95-170)||(33401-33476)
[»] chr2 (41 HSPs)
chr2 (21-151)||(25210311-25210442)
chr2 (95-169)||(37106701-37106775)
chr2 (72-170)||(35248390-35248489)
chr2 (96-203)||(6027855-6027968)
chr2 (95-169)||(9632395-9632469)
chr2 (95-169)||(30846955-30847029)
chr2 (95-167)||(24414140-24414212)
chr2 (97-156)||(3547177-3547236)
chr2 (95-170)||(6164478-6164553)
chr2 (71-153)||(8915959-8916042)
chr2 (95-166)||(13705370-13705441)
chr2 (95-166)||(38342528-38342599)
chr2 (13-142)||(11958941-11959071)
chr2 (50-166)||(35965298-35965414)
chr2 (21-132)||(13531883-13531995)
chr2 (95-170)||(30978936-30979009)
chr2 (163-203)||(36128060-36128100)
chr2 (71-169)||(37999467-37999566)
chr2 (95-166)||(43371562-43371633)
chr2 (95-169)||(7314654-7314728)
chr2 (95-169)||(14331536-14331610)
chr2 (95-165)||(37472769-37472839)
chr2 (96-169)||(10208436-10208509)
chr2 (95-156)||(18485657-18485718)
chr2 (86-170)||(35510448-35510533)
chr2 (62-166)||(45256798-45256903)
chr2 (71-122)||(10920629-10920681)
chr2 (163-203)||(24414086-24414126)
chr2 (102-170)||(34458838-34458906)
chr2 (96-152)||(42798011-42798067)
chr2 (95-170)||(15546753-15546828)
chr2 (95-170)||(22900803-22900878)
chr2 (26-156)||(30696863-30696994)
chr2 (95-150)||(36128131-36128186)
chr2 (97-156)||(45115569-45115628)
chr2 (47-112)||(29656798-29656864)
chr2 (163-196)||(7314609-7314642)
chr2 (96-153)||(13830746-13830802)
chr2 (163-203)||(30847041-30847081)
chr2 (163-203)||(44746063-44746103)
chr2 (63-170)||(44746114-44746222)
[»] scaffold0013 (2 HSPs)
scaffold0013 (95-170)||(128126-128201)
scaffold0013 (95-146)||(105498-105549)
[»] scaffold0005 (1 HSPs)
scaffold0005 (95-170)||(211372-211447)
[»] scaffold0184 (1 HSPs)
scaffold0184 (96-170)||(2978-3052)
[»] scaffold0022 (2 HSPs)
scaffold0022 (71-169)||(90580-90679)
scaffold0022 (163-196)||(90685-90718)
[»] scaffold0015 (1 HSPs)
scaffold0015 (95-170)||(55903-55977)
[»] scaffold1322 (1 HSPs)
scaffold1322 (47-96)||(1070-1119)
[»] scaffold0264 (1 HSPs)
scaffold0264 (100-156)||(17474-17530)
[»] scaffold0198 (1 HSPs)
scaffold0198 (61-156)||(20758-20854)


Alignment Details
Target: chr6 (Bit Score: 181; Significance: 6e-98; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 32959774 - 32959985
Alignment:
Q  1 ggaccgatactctgtaagtaaaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttggtatg 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32959774 ggaccgatactatgtaagtaaaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttggtatg 32959873  T
Q  101 ggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattaggga------aaacccaatcaaaacggggaaaatccgtcaaa 194  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      |||||||||||||||| |||||||||||||||    
T  32959874 ggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaaacccaatcaaaacgaggaaaatccgtcaaa 32959973  T
Q  195 ttaggtttgatt 206  Q
    ||||||||||||    
T  32959974 ttaggtttgatt 32959985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 95 - 197
Target Start/End: Complemental strand, 8320875 - 8320767
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa------tcaaaacggggaaaatcc 188  Q
    |||||||||||||||| |||| ||||||||| |||||| |||||||||||||||||||||||| ||||||||||||      ||||| ||||||||||||    
T  8320875 ggtatgggttcggggtcgatatctatatccctgttacctgttccgtacccgtgttttgaaattggggaaaacccaaacctagtcaaagcggggaaaatcc 8320776  T
Q  189 gtcaaatta 197  Q
    |||||||||    
T  8320775 gtcaaatta 8320767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 203
Target Start/End: Original strand, 9402522 - 9402710
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttg-gtatgggttcggggtggataccta 119  Q
    |||| |||||||||||||||| ||  ||||||||  |||||| |||||||||||||||||||   ||| | |||| |||||||||| ||||||| |||||    
T  9402522 aaatgatttagggtttgggtttctatttatataaatggggtactaaattgattttctacattcgagacaggtttgagtatgggttc-gggtggacaccta 9402620  T
Q  120 tatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa------tcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    |||||  ||||||||| | |||||| |||||||||||  ||||||||||||      ||||| |||||||||||| ||||||| ||||||    
T  9402621 tatccatgttacccgtcctgtacccatgttttgaaatcggggaaaacccaaatccagtcaaagcggggaaaatccatcaaattgggtttg 9402710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 21 - 167
Target Start/End: Original strand, 13769005 - 13769152
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggataccta 119  Q
    |||||||||| |||||| ||| |   |||||||| ||| ||||||||||||||||||||||| | ||||| ||||| ||||||||| |||||| ||||||    
T  13769005 aaataatttatggtttgagtttcaatttatataaaaggagtaataaattgattttctacattcaggacgggtttggatatgggttctgggtgggtaccta 13769104  T
Q  120 tatccccgttacccgttccgtacccgtgttttgaaattagggaaaacc 167  Q
    |||  ||||||||||| || ||||| ||||||||| |  |||||||||    
T  13769105 tatgtccgttacccgtcccatacccatgttttgaagtcggggaaaacc 13769152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 28079776 - 28079701
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||  ||||||||||||    
T  28079776 ggtatgggttcggggtgggtacctatatccccgttacccgtcccgtacccatgttttgaaatcggggaaaacccaa 28079701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 51 - 166
Target Start/End: Complemental strand, 256617 - 256501
Alignment:
Q  51 ataataggggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgtt 149  Q
    |||| ||||||| ||||||||||||||||||||| || || ||||| |||||||| ||||||| ||||||||| ||| ||||||||  ||||||| ||||    
T  256617 ataaaaggggtagtaaattgattttctacatttaggaggggtttgggtatgggtttggggtgggtacctatatgcccattacccgtctcgtacccatgtt 256518  T
Q  150 ttgaaattagggaaaac 166  Q
    |||||||  ||||||||    
T  256517 ttgaaatcggggaaaac 256501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 95 - 208
Target Start/End: Complemental strand, 14410935 - 14410817
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa------tcaaaacggggaaaatcc 188  Q
    |||||||||||||||||| ||||||||| |||||||||||| || |||||||||||||||||  |||||||| |||      ||||||| ||||||||||    
T  14410935 ggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatctgggaaaactcaaacctagtcaaaac-gggaaaatcc 14410837  T
Q  189 gtcaaattaggtttgatttg 208  Q
    |||||||||| |||| ||||    
T  14410836 gtcaaattagatttggtttg 14410817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 47 - 170
Target Start/End: Original strand, 20349023 - 20349147
Alignment:
Q  47 ttatataataggggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccg 145  Q
    |||||||| | | |||||||||| ||||| |||||||   |||||||||| |||| ||||||||||| |||||||||||||||||| ||| || ||||||    
T  20349023 ttatataaaaagtgtaataaattaattttttacatttgcaacggatttgggtatgagttcggggtgggtacctatatccccgttactcgtcccatacccg 20349122  T
Q  146 tgttttgaaattagggaaaacccaa 170  Q
    |||||||||||  ||||||| ||||    
T  20349123 tgttttgaaatcggggaaaatccaa 20349147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 95 - 195
Target Start/End: Complemental strand, 29199965 - 29199859
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattaggga------aaacccaatcaaaacggggaaaatcc 188  Q
    |||||||||||||||| ||||| |||||||| ||||||||| |||||||||| |||||||||  ||||      ||||||||||||| ||||||||||||    
T  29199965 ggtatgggttcggggtagatacatatatccctgttacccgtcccgtacccgtattttgaaatcggggaaaatccaaacccaatcaaatcggggaaaatcc 29199866  T
Q  189 gtcaaat 195  Q
    |||||||    
T  29199865 gtcaaat 29199859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 32853827 - 32853926
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||| |||||||  ||||| ||||| |||||||||||||||| ||||||||| |||||||||||| || |||||||||||||| ||  |||||||||||    
T  32853827 attttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaaccca 32853926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 206
Target Start/End: Complemental strand, 7393966 - 7393850
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattaggga------aaacccaatcaaaacggggaaaatccg 189  Q
    ||||||||||||||||||||||||||| ||| ||| ||||  | ||| |||||||||||||  ||||      |||||||||||||| ||||||||||||    
T  7393966 gtatgggttcggggtggatacctatatacccattatccgtctcttactcgtgttttgaaatcggggaaaatccaaacccaatcaaaatggggaaaatccg 7393867  T
Q  190 tcaaattaggtttgatt 206  Q
    ||||||| | |||||||    
T  7393866 tcaaattggatttgatt 7393850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 169
Target Start/End: Original strand, 32532549 - 32532622
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||||||||||||| ||||||||| ||| |||||||| || |||||||||||||||||  |||||||||||    
T  32532549 gtatgggttcggggtgggtacctatatacccattacccgtcccatacccgtgttttgaaatcggggaaaaccca 32532622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 12141368 - 12141467
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||| |||||||  ||||| ||||| |||||||||||||||| ||||||||| ||||| |||||| || || ||||||||||| ||| |||||||||||    
T  12141368 attttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgtcacccgtcccatatccgtgttttgagattggggaaaaccca 12141467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 12309555 - 12309654
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||| |||||||  ||||| ||||| ||| |||||||||||| ||| ||||| || |||||||||||| ||||||||||||||||| |||||| |||||    
T  12309555 attttttacatttgggacgggtttgggtatcggttcggggtgggtacatatatacctgttacccgttccatacccgtgttttgaaatcagggaataccca 12309654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 47 - 169
Target Start/End: Complemental strand, 34346134 - 34346011
Alignment:
Q  47 ttatataataggggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccg 145  Q
    |||||||| ||| |||||||||| ||||||||||||    |||||||||| ||| | |||||||||| |||||||||||||||||| || |||| |||||    
T  34346134 ttatataaaaggagtaataaattaattttctacattcggaacggatttgggtatagattcggggtgggtacctatatccccgttactcgctccgaacccg 34346035  T
Q  146 tgttttgaaattagggaaaaccca 169  Q
    | |||| ||||  || ||||||||    
T  34346034 tattttaaaatcgggaaaaaccca 34346011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 2367334 - 2367408
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||||| ||| ||||| |||||||||||| || |||||||||||||| ||  |||||||||||    
T  2367334 ggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgagatcggggaaaaccca 2367408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 169
Target Start/End: Complemental strand, 5863463 - 5863389
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||| ||||| || |||||| |||||||||||| || |||||||||||||||||  |||||||||||    
T  5863463 ggtatgggttcgaggtgggtatctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaaccca 5863389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 27738755 - 27738854
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||| |||||||  ||||| ||||| |||||||||||||||| ||| |||||  | ||||||||| || |||||||||||||||||  |||||||||||    
T  27738755 attttttacatttgggacgggtttgggtatgggttcggggtgggtacatatatatctgttacccgtcccatacccgtgttttgaaatcggggaaaaccca 27738854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 169
Target Start/End: Complemental strand, 3484003 - 3483929
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||||| ||||||||| |||||||||| | || ||||||||||| || ||  |||||||||||    
T  3484003 ggtatgggttcggggtgggtacctatatacccgttacccatcccatacccgtgtttcgagatcggggaaaaccca 3483929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 24602961 - 24602829
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||||||||  ||| || ||||| |||||||||||||||| || |||||| || |||||||||  | ||||| |||||||||||  |||||||||||    
T  24602961 attttctacattcgtgatgggtttgggtatgggttcggggtgggtatctatatacctgttacccgtcacatacccatgttttgaaatctgggaaaaccca 24602862  T
Q  170 a------tcaaaacggggaaaatccgtcaaatt 196  Q
    |      ||||||| ||||||| ||||||||||    
T  24602861 aacccagtcaaaacagggaaaaaccgtcaaatt 24602829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 196
Target Start/End: Original strand, 14506095 - 14506201
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa------tcaaaacggggaaaatccg 189  Q
    ||||||||||||||||| |||||| || |  ||||||||| || |||| ||||||||||||  ||||||||||||      |||||| |||||||| |||    
T  14506095 gtatgggttcggggtgggtacctaaatacttgttacccgtcccatacctgtgttttgaaatcggggaaaacccaaacccagtcaaaatggggaaaacccg 14506194  T
Q  190 tcaaatt 196  Q
    |||||||    
T  14506195 tcaaatt 14506201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 170
Target Start/End: Complemental strand, 20611054 - 20610987
Alignment:
Q  103 ttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||| ||||| |||||||||||| || ||||||| |||||||||  |||||| |||||    
T  20611054 ttcggggtggatacatatattcccgttacccgtcccctacccgtattttgaaatcggggaaaccccaa 20610987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 153
Target Start/End: Original strand, 24225709 - 24225764
Alignment:
Q  98 atgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttga 153  Q
    ||||||||||||||| ||||||||| |||||||||||| || || |||||||||||    
T  24225709 atgggttcggggtgggtacctatatacccgttacccgtcccatatccgtgttttga 24225764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 150
Target Start/End: Original strand, 27534692 - 27534747
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttt 150  Q
    ||||||| |||||||||| ||||||||| |||||||||||| || |||||||||||    
T  27534692 ggtatggattcggggtgggtacctatatacccgttacccgtcccatacccgtgttt 27534747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 169
Target Start/End: Complemental strand, 34178398 - 34178335
Alignment:
Q  106 ggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||| |||||||||||  |||||||||  ||||||||||||||||||| |||| |||||||    
T  34178398 ggggtgggtacctatatccttgttacccgtctcgtacccgtgttttgaaatcaggggaaaccca 34178335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 9442441 - 9442499
Alignment:
Q  98 atgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||||||| |||| ||||| ||| |||||||||||| || |||||||||||||||||    
T  9442441 atgggttcggagtgggtacctctatacccgttacccgtcccatacccgtgttttgaaat 9442499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 169
Target Start/End: Complemental strand, 10142598 - 10142524
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||| ||||||||||| ||||||||| ||||||||| || || ||||||| |||||| ||  |||||||||||    
T  10142598 ggtatgagttcggggtgggtacctatatacccgttacctgtcccatacccgttttttgagatcggggaaaaccca 10142524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 71 - 156
Target Start/End: Original strand, 11762428 - 11762514
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||||||||||  || || ||||| |||| |||||||||||| |||||||| |||||||||||| || ||||| ||||| |||||    
T  11762428 attttctacatttgggatgggtttgggtatgagttcggggtggacacctatatacccgttacccgtcccatacccttgtttagaaat 11762514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 32053096 - 32053170
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||| ||||||| ||| ||||| |||||||||||| || || || |||||||||||  |||||||||||    
T  32053096 ggtatgggtttggggtgggtacatatatacccgttacccgtcccatatccatgttttgaaatcggggaaaaccca 32053170  T

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Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 164
Target Start/End: Original strand, 9458671 - 9458740
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaa 164  Q
    |||||| ||||| ||||| ||| ||||||||||||| | || |||||||||| |||||||||| ||||||    
T  9458671 ggtatgagttcgaggtgggtacatatatccccgttatctgtcccgtacccgtattttgaaattggggaaa 9458740  T

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Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 83
Target Start/End: Complemental strand, 1947920 - 1947884
Alignment:
Q  47 ttatataataggggtaataaattgattttctacattt 83  Q
    |||||||| ||||||||||||||||||||||||||||    
T  1947920 ttatataaaaggggtaataaattgattttctacattt 1947884  T

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Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 155
Target Start/End: Complemental strand, 10925523 - 10925463
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaa 155  Q
    |||||||||||||||||||||| |||||| || |||||| |  ||||||| ||||||||||    
T  10925523 ggtatgggttcggggtggatacttatatctccattacccatctcgtacccatgttttgaaa 10925463  T

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Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 30816352 - 30816392
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    |||||||||||||||||||||||||| ||||||| ||||||    
T  30816352 aaacccaatcaaaacggggaaaatccatcaaattgggtttg 30816392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 166
Target Start/End: Complemental strand, 12678174 - 12678103
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaac 166  Q
    ||||||||||| |||||| ||||||||| ||| |||||||| || |||| |||| |||||||  ||||||||    
T  12678174 ggtatgggttcagggtgggtacctatataccctttacccgtcccatacctgtgtcttgaaatcggggaaaac 12678103  T

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Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 15498336 - 15498406
Alignment:
Q  99 tgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||| ||| ||||||||| ||| ||||| ||  | |||||||||||||||||  |||||||||||    
T  15498336 tgggttcgggatgggtacctatatacccattacctgtctcatacccgtgttttgaaatcggggaaaaccca 15498406  T

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Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 196
Target Start/End: Original strand, 27534778 - 27534811
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaatt 196  Q
    ||||||||||||||||||||||| ||||||||||    
T  27534778 aaacccaatcaaaacggggaaaacccgtcaaatt 27534811  T

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Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 3483917 - 3483877
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| ||||||||||||||| |||||||||| ||||||    
T  3483917 aaacccagtcaaaacggggaaaacccgtcaaattgggtttg 3483877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 5863377 - 5863337
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| ||||||||||||||| |||||||||| ||||||    
T  5863377 aaacccagtcaaaacggggaaaacccgtcaaattgggtttg 5863337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 10188074 - 10188034
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| ||||||||||||||| |||||||||| ||||||    
T  10188074 aaacccagtcaaaacggggaaaacccgtcaaattgggtttg 10188034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 32053176 - 32053216
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| ||||||||||||||| |||||||||| ||||||    
T  32053176 aaacccagtcaaaacggggaaaacccgtcaaattgggtttg 32053216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 4e-31; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 21 - 156
Target Start/End: Complemental strand, 30904970 - 30904835
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggattt-ggtatgggttcggggtggataccta 119  Q
    |||| ||| |||||||||||| ||  |||||||| ||||||| ||||||||||| |||||||   ||||||||| |||||||||||||||||| ||||||    
T  30904970 aaatgattaagggtttgggtttctatttatataaaaggggtagtaaattgatttcctacattcgagacggatttgggtatgggttcggggtgggtaccta 30904871  T
Q  120 tatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||||| ||||||| ||||||||||||||||||||    
T  30904870 tatccccg-tacccgtcccgtacccgtgttttgaaat 30904835  T

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Target: chr3; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 44639282 - 44639356
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||||| ||||||||| |||||||||||| || |||||||||||||| ||  |||||||||||    
T  44639282 ggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatatgggaaaaccca 44639356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 169
Target Start/End: Complemental strand, 7469857 - 7469784
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||||||||||||| ||||||||| |||||||||||| || ||||||||||| || || ||||||||||||    
T  7469857 gtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcagggaaaaccca 7469784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 170
Target Start/End: Original strand, 42243345 - 42243470
Alignment:
Q  46 cttatataataggggtaataaattgattttctacatttatgacggattt-ggtatgggttcggggtggatacctatatccccgttacccgttccgtaccc 144  Q
    ||||||||| ||||||||||||||||||||||||||||| || || ||| ||||||  || ||||||||||  ||||||| |||||||| |  | |||||    
T  42243345 cttatataaaaggggtaataaattgattttctacatttaggatgggtttgggtatgaatttggggtggataaatatatcctcgttacccatctcataccc 42243444  T
Q  145 gtgttttgaaattagggaaaacccaa 170  Q
    |||| |||||||  || |||||||||    
T  42243445 gtgtattgaaatcgggaaaaacccaa 42243470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 95 - 166
Target Start/End: Original strand, 23580835 - 23580906
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaac 166  Q
    ||||||||||||| |||| ||||||||| ||||||||||||| | ||| |||||||||||||| ||||||||    
T  23580835 ggtatgggttcggagtgggtacctatatacccgttacccgtttcatactcgtgttttgaaattggggaaaac 23580906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 44172609 - 44172708
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||| |||||||  ||||| ||||| |||||||||||||||| ||| ||||| |||||||||||| || |||||||||||||| ||  |||||||||||    
T  44172609 attttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgagatcggggaaaaccca 44172708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 44179309 - 44179408
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||| |||||||  ||||| ||||| |||||||||||||||| ||| ||||| |||||||||||| || |||||||||||||| ||  |||||||||||    
T  44179309 attttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgagatcggggaaaaccca 44179408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 95 - 166
Target Start/End: Complemental strand, 48305721 - 48305650
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaac 166  Q
    ||||| |||||||||||| ||||||||| |||| ||| |||||| |||||||||||||||||| ||||||||    
T  48305721 ggtataggttcggggtgggtacctatatacccgatactcgttccatacccgtgttttgaaattggggaaaac 48305650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 169
Target Start/End: Complemental strand, 23547022 - 23546948
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||||| ||||||||| |||||||||||| || ||||||||||| || ||  |||||||||||    
T  23547022 ggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaaccca 23546948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 169
Target Start/End: Complemental strand, 48390897 - 48390823
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||||||| || ||| ||||||||| |||||||||||| || |||||||||||||||||  |||||||||||    
T  48390897 ggtatgggttcaggatgggtacctatattcccgttacccgtcccatacccgtgttttgaaatcggggaaaaccca 48390823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 3385939 - 3385875
Alignment:
Q  92 tttggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||||||| |||| ||||| ||||||||||| ||||||| || ||||||||||||||||||||    
T  3385939 tttggtatggattcgtggtggctacctatatcctcgttacctgtcccgtacccgtgttttgaaat 3385875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 4016124 - 4016049
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||||||||||| |||| ||||||||| ||||||| |||| || ||||| |||||||||||  ||||||||||||    
T  4016124 ggtatgggttcggagtgggtacctatatacccgttatccgtcccatacccatgttttgaaatcggggaaaacccaa 4016049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 4557385 - 4557310
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||| ||||||||| | |||||||||| || ||||| ||||||||||   ||||||||||||    
T  4557385 ggtatgggttcggggtgggtacctatatactcgttacccgtcccatacccatgttttgaaaacggggaaaacccaa 4557310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 10043362 - 10043287
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||| | | |||| ||||||||||||| || ||||| ||||||||||  |||||||||||||    
T  10043362 ggtatgggttcggggtgggtgcatataaccccgttacccgtcccatacccatgttttgaaaccagggaaaacccaa 10043287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 42758382 - 42758457
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||||||||||||||| |||||||||| || ||||||||| || |||| ||||||||||||  ||| ||||||||    
T  42758382 ggtatgggttcggggtgcatacctatatacctgttacccgtcccatacctgtgttttgaaatcgggggaaacccaa 42758457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 49580047 - 49580146
Alignment:
Q  71 attttctacatttatgacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||| |||||||  ||||| |||| ||||||||||| ||||| ||||||||| | |||||||||| || |||||||||||||| ||  |||||||||||    
T  49580047 attttttacatttgggacgggtttgagtatgggttcgaggtgggtacctatatactcgttacccgtcccatacccgtgttttgagatcggggaaaaccca 49580146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 96 - 166
Target Start/End: Complemental strand, 22535920 - 22535850
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaac 166  Q
    ||||||||||||||||| | ||| ||| |||||||||||| || || ||||||||||||||| ||||||||    
T  22535920 gtatgggttcggggtgggtgcctgtatacccgttacccgtcccatatccgtgttttgaaattggggaaaac 22535850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 34025962 - 34026036
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||| |||||||||||| |||||||| | |||||||||| || |||| ||||||||||||  |||||||||||    
T  34025962 ggtatgagttcggggtggaaacctatatactcgttacccgtcccatacctgtgttttgaaatcggggaaaaccca 34026036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 169
Target Start/End: Complemental strand, 39655353 - 39655279
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||| ||||||| ||||||||| || ||||||||| || |||||||||||||| ||  |||||||||||    
T  39655353 ggtatgggtttggggtgggtacctatatacctgttacccgtcccatacccgtgttttgagatcggggaaaaccca 39655279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 169
Target Start/End: Complemental strand, 44953539 - 44953441
Alignment:
Q  72 ttttctacatttatgacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||| |||||||  ||||| |||| ||||| ||||||||||  ||||||||| |||||||||||| || |||||||||||||| ||  |||||||||||    
T  44953539 ttttttacatttgggacgggtttgagtatgagttcggggtgagtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaaccca 44953441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 153
Target Start/End: Original strand, 52198163 - 52198221
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttga 153  Q
    |||||||||||||||||| ||||||||| |||||||||||| || |||| |||||||||    
T  52198163 ggtatgggttcggggtgggtacctatatacccgttacccgtcccatacctgtgttttga 52198221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 96 - 166
Target Start/End: Original strand, 53631913 - 53631983
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaac 166  Q
    ||||||||||||||||| ||||||||| ||||||||||||  | ||| |||||||| ||||| ||||||||    
T  53631913 gtatgggttcggggtgggtacctatatacccgttacccgtctcatacacgtgttttaaaatttgggaaaac 53631983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 153
Target Start/End: Complemental strand, 17146229 - 17146172
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttga 153  Q
    |||||||||||||||||||||||||||  | |||||||||||| ||||| ||||||||    
T  17146229 gtatgggttcggggtggatacctatataactgttacccgttccatacccatgttttga 17146172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 169
Target Start/End: Complemental strand, 23154143 - 23154071
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||| |||| ||||||||| | ||||||||||||| |||||||| ||||||||  |||||||||||    
T  23154143 gtatgggttcggagtgggtacctatatactcgttacccgttccatacccgtg-tttgaaatcggggaaaaccca 23154071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 169
Target Start/End: Original strand, 29842317 - 29842389
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||||||||||||| ||||||||| ||||||||| || || |||||||||||| ||| | |||||||||||    
T  29842317 gtatgggttcggggtgggtacctatattcccgttaccagtcccatacccgtgtttt-aaaatcgggaaaaccca 29842389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 167
Target Start/End: Complemental strand, 44106897 - 44106800
Alignment:
Q  71 attttctacatttatgacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacc 167  Q
    ||||| |||||||  ||||| |||| ||||||||||||||| |||||||||||  ||||||| ||| || |||||||||||| | ||| |||||||||    
T  44106897 attttttacatttgggacgggtttgagtatgggttcggggtagatacctatatatccgttacgcgtcccatacccgtgttttaagattggggaaaacc 44106800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 61 - 156
Target Start/End: Original strand, 4553163 - 4553259
Alignment:
Q  61 taataaattgattttctacatttatgacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    ||||||||||||||| ||||||   ||||| |||| ||||||||||||||||  ||  ||||||||  |||||||||||| |||| |||||||||||    
T  4553163 taataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtatttatatccctattacccgttccgcacccatgttttgaaat 4553259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 150
Target Start/End: Original strand, 29284344 - 29284399
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttt 150  Q
    |||||||||||||| ||| ||||||||| |||||||||||| || |||||||||||    
T  29284344 ggtatgggttcgggctgggtacctatatacccgttacccgtcccatacccgtgttt 29284399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 30616361 - 30616286
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||| ||  |||| || |||||||||| || || ||||||||||||||  ||||||||||||    
T  30616361 ggtatgggttcggggtggttatatataacctcgttacccgtcccatatccgtgttttgaaatcggggaaaacccaa 30616286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 166
Target Start/End: Original strand, 34154422 - 34154493
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaac 166  Q
    |||||||||||||||||| ||||||||| |  |||||||||| | ||||| |||||||||||  ||||||||    
T  34154422 ggtatgggttcggggtgggtacctatattcttgttacccgtttcatacccatgttttgaaatcggggaaaac 34154493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 44252755 - 44252829
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||||| ||||||||| || ||||| ||| || ||||||||||| || ||  |||||||||||    
T  44252755 ggtatgggttcggggtgggtacctatatacctgttacacgtcccatacccgtgtttcgagatcggggaaaaccca 44252829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 156
Target Start/End: Original strand, 34119640 - 34119725
Alignment:
Q  72 ttttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||| |||||  ||||||||||| |||||||||||||||| ||||||||| || |||| ||||  | |||||||||||| ||||    
T  34119640 ttttctgcatttgggacggatttgggtatgggttcggggtgggtacctatatacctgttatccgtctcatacccgtgttttaaaat 34119725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 153
Target Start/End: Original strand, 52572618 - 52572675
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttga 153  Q
    |||||| |||||||||| | ||||||| |||||||||||| || ||||||||||||||    
T  52572618 gtatggattcggggtgggtccctatatacccgttacccgtcccatacccgtgttttga 52572675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 39655267 - 39655227
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||||||||||||||||||| |||||||||| ||||||    
T  39655267 aaacccaatcaaaacggggaaaacccgtcaaattgggtttg 39655227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 54317155 - 54317223
Alignment:
Q  98 atgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaac 166  Q
    ||||||||||||||| ||||||||| |||||||||||| |  |||  ||||||||||||  ||||||||    
T  54317155 atgggttcggggtgggtacctatatacccgttacccgtcctatacttgtgttttgaaatcggggaaaac 54317223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 153
Target Start/End: Original strand, 39728654 - 39728737
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttga 153  Q
    ||||| |||||||  ||||| ||||| |||||||||||||||| ||| ||||| |||||||||| | || ||||||| ||||||    
T  39728654 attttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccatcccatacccgtattttga 39728737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 206
Target Start/End: Original strand, 44252841 - 44252884
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttgatt 206  Q
    ||||||| ||||||||||||||| |||||||||| |||||||||    
T  44252841 aaacccagtcaaaacggggaaaacccgtcaaatttggtttgatt 44252884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 831096 - 831141
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttgatttg 208  Q
    ||||||| ||||||||||||||| |||||||||| |||||| ||||    
T  831096 aaacccagtcaaaacggggaaaacccgtcaaatttggtttggtttg 831141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 196
Target Start/End: Original strand, 34154508 - 34154541
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaatt 196  Q
    ||||||| ||||||||||||||||||||||||||    
T  34154508 aaacccagtcaaaacggggaaaatccgtcaaatt 34154541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 196
Target Start/End: Original strand, 39728765 - 39728798
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaatt 196  Q
    ||||||| ||||||||||||||||||||||||||    
T  39728765 aaacccagtcaaaacggggaaaatccgtcaaatt 39728798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 196
Target Start/End: Complemental strand, 48390811 - 48390778
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaatt 196  Q
    ||||||| ||||||||||||||||||||||||||    
T  48390811 aaacccagtcaaaacggggaaaatccgtcaaatt 48390778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 7469772 - 7469732
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| ||||||||||||||| |||||||||| ||||||    
T  7469772 aaacccagtcaaaacggggaaaacccgtcaaattgggtttg 7469732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 10371267 - 10371227
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| ||||||||||||||| |||||||||| ||||||    
T  10371267 aaacccagtcaaaacggggaaaacccgtcaaattgggtttg 10371227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 29858569 - 29858529
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| |||||||||||||||||||| ||||| ||||||    
T  29858569 aaacccagtcaaaacggggaaaatccgttaaattgggtttg 29858529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 34119750 - 34119790
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    |||||||||||||| |||||||| |||||||||||| ||||    
T  34119750 aaacccaatcaaaatggggaaaacccgtcaaattagatttg 34119790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 42758468 - 42758508
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| | |||||||||||||||||||||||| ||||||    
T  42758468 aaacccagttaaaacggggaaaatccgtcaaattgggtttg 42758508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 44953429 - 44953389
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| ||||||||||||||| |||||||||| ||||||    
T  44953429 aaacccagtcaaaacggggaaaacccgtcaaattgggtttg 44953389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 170
Target Start/End: Original strand, 49025707 - 49025763
Alignment:
Q  114 tacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||||||| || ||||||||| || |||||||||||||| ||  ||||||||||||    
T  49025707 tacctatatacctgttacccgtcccatacccgtgttttgagatcggggaaaacccaa 49025763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 6e-30; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 21 - 170
Target Start/End: Complemental strand, 8545504 - 8545354
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttg-gtatgggttcggggtggataccta 119  Q
    |||| ||||||||||||| || ||| |||||||| ||| ||  ||||||||||||||||||||  ||||  |||| ||||||||||||||||| || |||    
T  8545504 aaatgatttagggtttggatttctgtttatataaaaggagttgtaaattgattttctacatttgggacgagtttgagtatgggttcggggtgggtatcta 8545405  T
Q  120 tatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||| |||||| |||||||||||||||||  | ||||||||||    
T  8545404 tatccccgttactcgttccatacccgtgttttgaaatcggagaaaacccaa 8545354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 95 - 203
Target Start/End: Original strand, 17469263 - 17469377
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa------tcaaaacggggaaaatcc 188  Q
    |||||||||| ||||||| ||||||||| |||||||||||| || |||||||||||||||||  ||||||||||||      ||||||||||||||||||    
T  17469263 ggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaacccagtcaaaacggggaaaatcc 17469362  T
Q  189 gtcaaattaggtttg 203  Q
    |||||||| ||||||    
T  17469363 gtcaaattgggtttg 17469377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 21 - 156
Target Start/End: Original strand, 29918540 - 29918676
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttg-gtatgggttcggggtggataccta 119  Q
    |||| |||||||||||| ||| ||  |||||||| || ||||||||||||||||| |||||||  ||||| |||| |||||| |||||||||| ||| ||    
T  29918540 aaatgatttagggtttgagtttctatttatataaaagaggtaataaattgattttttacatttgggacgggtttgtgtatggtttcggggtgggtacata 29918639  T
Q  120 tatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    ||||   ||||||||||| ||||  ||||||||||||    
T  29918640 tatctttgttacccgttctgtacatgtgttttgaaat 29918676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 63 - 166
Target Start/End: Original strand, 45236040 - 45236144
Alignment:
Q  63 ataaattgattttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattaggg 161  Q
    ||||||| ||||| |||||||  ||||| | ||| |||||||||||||||| ||||||||| ||| |||||||| || ||||||||||||||||| ||||    
T  45236040 ataaattaattttttacatttgggacgggtatggatatgggttcggggtgggtacctatatacccattacccgtcccatacccgtgttttgaaatcaggg 45236139  T
Q  162 aaaac 166  Q
    |||||    
T  45236140 aaaac 45236144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 27932396 - 27932495
Alignment:
Q  71 attttctacatttatgacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||| |||||||  ||||||| || ||||||||||||||||| ||||||||| |||||||| ||| || |||||||||||||||||  |||||||||||    
T  27932396 attttttacatttgggacggatatgagtatgggttcggggtgggtacctatatacccgttactcgtcccatacccgtgttttgaaatcggggaaaaccca 27932495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 170
Target Start/End: Original strand, 14155490 - 14155615
Alignment:
Q  46 cttatataataggggtaataaattgattttctacatttatgacggattt-ggtatgggttcggggtggatacctatatccccgttacccgttccgtaccc 144  Q
    ||||||||| ||||||||||||||||||||||||||||| || || ||| ||||||  || ||||||||||  ||||||| |||||||| |    |||||    
T  14155490 cttatataaaaggggtaataaattgattttctacatttaggatgggtttgggtatgaatttggggtggataaatatatcctcgttacccatcttataccc 14155589  T
Q  145 gtgttttgaaattagggaaaacccaa 170  Q
    ||||||||||||  || |||||||||    
T  14155590 gtgttttgaaatcgggaaaaacccaa 14155615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 21 - 156
Target Start/End: Original strand, 30903979 - 30904115
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggataccta 119  Q
    |||| ||||| ||||| |||| ||  |||||||| | | |||||||||||||||||||||||   ||| ||||||| |||||||  ||||||| ||| ||    
T  30903979 aaatgatttaaggttttggtttctatttatataaaatgtgtaataaattgattttctacattcgggactgatttgggtatgggtatggggtgggtactta 30904078  T
Q  120 tatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||| || ||||||||  |||||||||||||||||||    
T  30904079 tatctccattacccgtctcgtacccgtgttttgaaat 30904115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 56 - 170
Target Start/End: Complemental strand, 9642471 - 9642356
Alignment:
Q  56 aggggtaataaattgattttctacatttatgacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaa 154  Q
    |||||||| ||| | ||||| |||||||  ||||| | || ||||||||||||| ||||||  |||| ||||||||||||| || |||||||||||||||    
T  9642471 aggggtaaaaaaataattttttacatttgggacgggtatgagtatgggttcgggatggatatatataaccccgttacccgtcccatacccgtgttttgaa 9642372  T
Q  155 attagggaaaacccaa 170  Q
    ||  ||||||||||||    
T  9642371 atcggggaaaacccaa 9642356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 63 - 206
Target Start/End: Original strand, 14186295 - 14186445
Alignment:
Q  63 ataaattgattttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattaggg 161  Q
    ||||||| |||||||||||| | ||||| ||||| ||||||||| |||||  |||||||||  ||||||||| | || |||||||||||||||||   |     
T  14186295 ataaattaattttctacattcaggacgggtttgggtatgggttcagggtgagtacctatatatccgttacccatcccatacccgtgttttgaaatcgaga 14186394  T
Q  162 a------aaacccaatcaaaacggggaaaatccgtcaaattaggtttgatt 206  Q
    |      ||||||||||||||||| ||||| ||||||||| ||||||||||    
T  14186395 aaaactcaaacccaatcaaaacggagaaaacccgtcaaatcaggtttgatt 14186445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 24927957 - 24928031
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||||| ||||||||| ||||||||||||  | ||||||||||| || || ||||||||||||    
T  24927957 ggtatgggttcggggtgggtacctatatacccgttacccgtctcatacccgtgtttcgagatcagggaaaaccca 24928031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 152
Target Start/End: Original strand, 28345450 - 28345556
Alignment:
Q  47 ttatataataggggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccg 145  Q
    |||||||| |||||||||| ||| |||||||||||| | |||   ||||| |||||||||||||||| | ||||||||| |||||||| | | |||||||    
T  28345450 ttatataaaaggggtaatatatttattttctacattcaggacaagtttgggtatgggttcggggtgggtgcctatatcctcgttacccatcctgtacccg 28345549  T
Q  146 tgttttg 152  Q
    |||||||    
T  28345550 tgttttg 28345556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 32303069 - 32303143
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||||| ||||||||| |||||||||||| || ||||||||||| || ||  |||||||||||    
T  32303069 ggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaaccca 32303143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 6388660 - 6388599
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatt 82  Q
    |||| |||||||||||||||| ||| |||||||| | |||||||||||||||||||||||||    
T  6388660 aaatgatttagggtttgggtttctgtttatataaaatgggtaataaattgattttctacatt 6388599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 95 - 168
Target Start/End: Complemental strand, 15068667 - 15068595
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccc 168  Q
    |||||||||||||||||||||| ||||| ||||||||| || |||||||||| |||||||||  ||||||||||    
T  15068667 ggtatgggttcggggtggatacatatat-cccgttacctgtcccgtacccgtattttgaaatcggggaaaaccc 15068595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 86 - 203
Target Start/End: Complemental strand, 36132007 - 36131883
Alignment:
Q  86 gacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattaggga------aaacccaatcaaaacg 178  Q
    |||||||||| ||||| ||||||||||||||||| ||| ||| |||||| | || ||| |||||||||||||  ||||      ||||||||||||||||    
T  36132007 gacggatttgtgtatgagttcggggtggatacctgtatgccctttacccatcccatactcgtgttttgaaataggggaaaactcaaacccaatcaaaacg 36131908  T
Q  179 gggaaaatccgtcaaattaggtttg 203  Q
    |  ||||||| ||||||||||||||    
T  36131907 gaaaaaatccatcaaattaggtttg 36131883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 170
Target Start/End: Original strand, 14687378 - 14687482
Alignment:
Q  67 attgattttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaa 165  Q
    |||||||||| ||||| | ||||  ||||| |||||||||||||||||||| |||||||| ||| | ||| || |||| ||||||||||||  |||||||    
T  14687378 attgattttccacattcaggacgagtttgggtatgggttcggggtggatacatatatccctgtttctcgtcccatacctgtgttttgaaatcggggaaaa 14687477  T
Q  166 cccaa 170  Q
    |||||    
T  14687478 cccaa 14687482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 170
Target Start/End: Complemental strand, 17084263 - 17084112
Alignment:
Q  22 aataatttagggtttgggttactgcttatataataggggtaataaattgattttct--acatttatgacggatttgg-tatgggttcggggtggatacct 118  Q
    |||||||||||| |||||||  |  |||||||| | ||  |||||||||||||| |  |||||  ||| || ||||| |||| ||||||||||| || ||    
T  17084263 aataatttagggcttgggtttatatttatataaaaaggacaataaattgattttttttacattcgtgatgggtttggatatgagttcggggtgggtatct 17084164  T
Q  119 atatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||  |||||||||||||| ||||  | ||||||||||    
T  17084163 atatccccgttacccgtctcgtacccgtgttttaaaatcggagaaaacccaa 17084112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 20399603 - 20399675
Alignment:
Q  98 atgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||||||||||||| || |||||| |||||||||||| || |||||||||||||||||  | ||||||||||    
T  20399603 atgggttcggggtgggtatctatatacccgttacccgtcccatacccgtgttttgaaatcggagaaaacccaa 20399675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 86 - 172
Target Start/End: Complemental strand, 43113716 - 43113629
Alignment:
Q  86 gacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaatc 172  Q
    ||||||||||| |||| ||||||||||| ||||||||| || ||||||||| || | |||||||||||||||  || |||||||||||    
T  43113716 gacggatttgggtatgagttcggggtgggtacctatatacctgttacccgtcccatgcccgtgttttgaaatcgggaaaaacccaatc 43113629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 156
Target Start/End: Original strand, 5700315 - 5700425
Alignment:
Q  47 ttatataataggggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccg 145  Q
    |||||||| |||||||| ||||| ||||| ||||||   || |||||||| |||||||||| ||||| || |||||||||||||||| ||  | |||| |    
T  5700315 ttatataaaaggggtaaaaaattaattttatacattcgggatggatttgggtatgggttcgaggtgggtatctatatccccgttaccagtctcatacctg 5700414  T
Q  146 tgttttgaaat 156  Q
    |||||||||||    
T  5700415 tgttttgaaat 5700425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 170
Target Start/End: Original strand, 10297463 - 10297541
Alignment:
Q  92 tttggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||| |||| | ||| ||||||||||||||| || |||| ||||| |||||||||  ||||||||||||    
T  10297463 tttggtatgggttcagggtaggtacatatatccccgttacctgtcccgtccccgtattttgaaatcggggaaaacccaa 10297541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 71 - 166
Target Start/End: Complemental strand, 24870129 - 24870033
Alignment:
Q  71 attttctacatttatgacggattt-ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaac 166  Q
    ||||| |||||||  ||||| ||| |||||||| ||||||||| ||||||||| ||||||||||||  | |||||||||||| ||||  ||||||||    
T  24870129 attttttacatttgggacgggtttaggtatgggctcggggtgggtacctatatacccgttacccgtcacatacccgtgttttaaaatcggggaaaac 24870033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 71 - 166
Target Start/End: Complemental strand, 40248476 - 40248380
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaac 166  Q
    ||||| |||||||  ||||||| ||| |||||||||||| ||| ||||||||| ||||||| ||||  | |||||||||||||||||  ||||||||    
T  40248476 attttttacatttgggacggatatgggtatgggttcgggatgggtacctatatacccgttatccgtctcatacccgtgttttgaaatcggggaaaac 40248380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 156
Target Start/End: Original strand, 24568936 - 24569007
Alignment:
Q  86 gacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||||||| ||||||||||||||||||||||||||| |||| |||| || || ||||| |||| ||||||    
T  24568936 gacggatttgagtatgggttcggggtggatacctatatacccgctacctgtcccatacccatgttgtgaaat 24569007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 153
Target Start/End: Original strand, 34777049 - 34777132
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttga 153  Q
    ||||| |||||||  || |||||||| |||||||||||||||| |||||| || || ||||| |||||| ||||||||||||||    
T  34777049 attttttacatttgggatggatttgggtatgggttcggggtgggtacctaaatacctgttactcgttccatacccgtgttttga 34777132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 1063515 - 1063589
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||| ||||||||||| ||| ||||| ||||||| |||| || |||||||||||||||||  || ||||||||    
T  1063515 ggtatgagttcggggtgggtacttatatacccgttaaccgtcccatacccgtgttttgaaatcgggaaaaaccca 1063589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 169
Target Start/End: Complemental strand, 29108902 - 29108828
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||||| ||| ||||| |||||||||||| || ||||| |||||| ||||  || ||||||||    
T  29108902 ggtatgggttcggggtgggtacatatatacccgttacccgtcccatacccatgttttaaaatcgggaaaaaccca 29108828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 169
Target Start/End: Complemental strand, 39445656 - 39445582
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||| ||||||||||| ||||||||  ||||||||| || || |||||||||||||||||  || ||||||||    
T  39445656 ggtatgagttcggggtgggtacctataaacccgttacctgtcccatacccgtgttttgaaatcgggaaaaaccca 39445582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 144
Target Start/End: Original strand, 2075866 - 2075915
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtaccc 144  Q
    |||||||||||||||||| ||||||||| |||||||||||| || |||||    
T  2075866 ggtatgggttcggggtgggtacctatatacccgttacccgtcccataccc 2075915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 156
Target Start/End: Complemental strand, 27777278 - 27777217
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||||||||||||||| ||||| |||| | |||||| || ||||||| ||||||||||||    
T  27777278 ggtatgggttcggggtgggtacctgtatctctgttacctgtcccgtacctgtgttttgaaat 27777217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 1012627 - 1012701
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||| ||||||||| ||| |||||||| || ||| | |||||| ||||  ||||||||||||    
T  1012627 ggtatgggttcggggtgggtacctatatacccattacccgtcccatactcatgtttt-aaatcggggaaaacccaa 1012701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 30481501 - 30481426
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||| ||||||||||| | |||| |||  | ||| ||| ||||||||| ||| |||||||||    
T  30481501 ggtatgggttcggggtgggtacctatatcctcattactcgtctcatactcgtattttgaaatcaggaaaaacccaa 30481426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 37961042 - 37960967
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||| ||||||||||  ||||||||| || |||||| || || |||||||||||| ||||  ||||||||||||    
T  37961042 ggtatgagttcggggtgtgtacctatatacctgttacctgtcccatacccgtgtttttaaatcggggaaaacccaa 37960967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 40789597 - 40789672
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||| |||||||||||| ||| |||||||| ||||||||| | |||||  | || ||||||| ||||||||||||    
T  40789597 ggtataggttcggggtgggtacatatatccctgttacccgtccagtacctatattatgaaattggggaaaacccaa 40789672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 156
Target Start/End: Complemental strand, 9476142 - 9476032
Alignment:
Q  47 ttatataataggggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccg 145  Q
    |||||||  ||||||||||| || ||||||||||||   || || ||||| |||||||||| ||||| ||  ||||||||||||||  || ||||| |||    
T  9476142 ttatatataaggggtaataatttaattttctacattcgggatgggtttgggtatgggttcgaggtgggtatttatatccccgttacttgtcccgtatccg 9476043  T
Q  146 tgttttgaaat 156  Q
    | |||||||||    
T  9476042 ttttttgaaat 9476032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 170
Target Start/End: Complemental strand, 12468373 - 12468224
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttg-gtatgggttcggggtggataccta 119  Q
    |||||||||||| |||| ||| ||  |||||||| | ||||||||| |||||||||||||||    ||| ||||| ||||| ||||||||| | ||||||    
T  12468373 aaataatttaggatttgcgtttctctttatataaaaagggtaataagttgattttctacattcggaacgaatttgagtatgagttcggggttggtaccta 12468274  T
Q  120 tatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
     || ||| ||||  ||  ||||||||||||| |||||   |||||||||||    
T  12468273 cat-cccattacatgtctcgtacccgtgtttcgaaatcgaggaaaacccaa 12468224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 196
Target Start/End: Complemental strand, 5858646 - 5858613
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaatt 196  Q
    ||||||||||||||||||||||| ||||||||||    
T  5858646 aaacccaatcaaaacggggaaaacccgtcaaatt 5858613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 2075828 - 2075788
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| ||||||||| |||||||||||||||| ||||||    
T  2075828 aaacccagtcaaaacggagaaaatccgtcaaattgggtttg 2075788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 24569032 - 24569071
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||||||||| ||||||||| |||||||||||||||||    
T  24569032 aaacccaatcaaa-cggggaaaacccgtcaaattaggtttg 24569071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 24928043 - 24928083
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| ||||||||||||||| |||||||||| ||||||    
T  24928043 aaacccagtcaaaacggggaaaacccgtcaaattgggtttg 24928083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 27932507 - 27932547
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| ||||||||||||||| |||||||||| ||||||    
T  27932507 aaacccagtcaaaacggggaaaacccgtcaaattgggtttg 27932547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 29108816 - 29108776
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| ||||||||||||||| |||||||||| ||||||    
T  29108816 aaacccagtcaaaacggggaaaacccgtcaaattgggtttg 29108776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 30481415 - 30481375
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||||||||||| |||||||||| |||| |||||||||    
T  30481415 aaacccaatcaaaacagggaaaatccatcaatttaggtttg 30481375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 32303155 - 32303195
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| ||||||||||||||| |||||||||| ||||||    
T  32303155 aaacccagtcaaaacggggaaaacccgtcaaattgggtttg 32303195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 35215555 - 35215618
Alignment:
Q  106 ggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||||| ||||||||| | ||||||||||  | |||||||||||||||| | ||||||||||||    
T  35215555 ggggtgggtacctatatactcgttacccgtctcatacccgtgttttgaaa-tcgggaaaacccaa 35215618  T

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Target: chr1 (Bit Score: 67; Significance: 6e-30; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 21 - 170
Target Start/End: Complemental strand, 48125838 - 48125688
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggataccta 119  Q
    ||||||||||| ||||| ||| ||  |||||||| || |||| |||||||||||||||||||   ||||  ||||| |||||||||||||||||||||||    
T  48125838 aaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcggggtggataccta 48125739  T
Q  120 tatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||| |||||||||| ||||||||||||||| |||| ||| |||| ||||    
T  48125738 tatcctcgttacccgtcccgtacccgtgttttaaaatcaggaaaaatccaa 48125688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 170
Target Start/End: Original strand, 39219192 - 39219342
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggataccta 119  Q
    |||| |||||||||||| ||| ||  |||||||| || ||||||||||| ||||||||||||||  |||  ||||| |||||||||||||||| ||| |     
T  39219192 aaatgatttagggtttgagtttctatttatataaaagaggtaataaattaattttctacatttagaacgagtttgggtatgggttcggggtgggtacatg 39219291  T
Q  120 tatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||||||||||  |||||||||||||||||| ||||  ||||||||||||    
T  39219292 tatccccgttacttgttccgtacccgtgttttaaaatcggggaaaacccaa 39219342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 46 - 170
Target Start/End: Original strand, 13798197 - 13798322
Alignment:
Q  46 cttatataataggggtaataaattgattttctacatttatgacggattt-ggtatgggttcggggtggatacctatatccccgttacccgttccgtaccc 144  Q
    ||||||||| ||||||||||||||||||||||||||||| || || ||| ||||||  || ||||||||||  ||||||| |||||||| |  | |||||    
T  13798197 cttatataaaaggggtaataaattgattttctacatttaggatgggtttaggtatgaatttggggtggataaatatatcctcgttacccatctcataccc 13798296  T
Q  145 gtgttttgaaattagggaaaacccaa 170  Q
    ||||||||||||  || |||||||||    
T  13798297 gtgttttgaaatcgggaaaaacccaa 13798322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 71 - 169
Target Start/End: Complemental strand, 24236866 - 24236767
Alignment:
Q  71 attttctacatttatgacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||| |||||||  ||||| |||| ||||||||||||||||| ||||||||| |||||| |||||||| |||||||||||||| ||  |||||||||||    
T  24236866 attttttacatttgggacgggtttgagtatgggttcggggtgggtacctatatacccgttccccgttccatacccgtgttttgagatcggggaaaaccca 24236767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 10450139 - 10450038
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaatcaaaacggggaaaatccgtcaaa 194  Q
    |||||| ||||||||||| ||| |||||||| ||||||||  |||||||||| |||| ||||| |||||| |||| |||||  |||||||| ||||||||    
T  10450139 ggtatgagttcggggtgggtacatatatccctgttacccgccccgtacccgtattttaaaattggggaaagcccagtcaaattggggaaaacccgtcaaa 10450040  T
Q  195 tt 196  Q
    ||    
T  10450039 tt 10450038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 169
Target Start/End: Complemental strand, 23490854 - 23490777
Alignment:
Q  92 tttggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||||||||||||||||| ||||||||| |||||||||||| || ||||||||||| || ||  |||||||||||    
T  23490854 tttggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaaccca 23490777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 96 - 156
Target Start/End: Complemental strand, 10778646 - 10778586
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||||||||||||||||| ||||| ||||||||||||| || |||||||||||||||||    
T  10778646 gtatgggttcggggtggatatctataaccccgttacccgtcccatacccgtgttttgaaat 10778586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 97 - 169
Target Start/End: Original strand, 16408953 - 16409025
Alignment:
Q  97 tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||| | ||||||||| || ||||||||| || |||||||||||||||||| |||||||||||    
T  16408953 tatgggttcggggtcggtacctatatacctgttacccgtcccatacccgtgttttgaaattggggaaaaccca 16409025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 96 - 167
Target Start/End: Complemental strand, 3628064 - 3627993
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacc 167  Q
    ||||||||||||||||| |||||| || |||||||||||| || |||||||||||||||||  |||||||||    
T  3628064 gtatgggttcggggtgggtacctacatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacc 3627993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 29936400 - 29936499
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||| |||||||  ||||| ||||| |||||||||||||||| ||||||||| |||||||||||| || ||||||| |||||| ||  |||||||||||    
T  29936400 attttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtattttgagatcggggaaaaccca 29936499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 34673362 - 34673287
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||| ||||||||| ||||||||| ||  | |||||||||||||||||| || |||||||||    
T  34673362 ggtatgggttcggggtgggtacctatatacccgttaccagtctcatacccgtgttttgaaattgggaaaaacccaa 34673287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 169
Target Start/End: Complemental strand, 36187300 - 36187226
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||||||| |||||| ||||||||| |||||||||||| || |||||||||||||| ||  |||||||||||    
T  36187300 ggtatgggttcagggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaaccca 36187226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 169
Target Start/End: Complemental strand, 50426741 - 50426667
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||||| ||||||||| ||||||| ||||  | ||||||||||||||||| ||||||| ||||    
T  50426741 ggtatgggttcggggtgggtacctatatacccgttatccgtctcatacccgtgttttgaaatcagggaaagccca 50426667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 169
Target Start/End: Complemental strand, 19572591 - 19572518
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||||||||||||| ||||||||| ||||||||| || || |||||||||||||||||  || ||||||||    
T  19572591 gtatgggttcggggtgggtacctatatacccgttacctgtcccatacccgtgttttgaaatcgggaaaaaccca 19572518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 150
Target Start/End: Original strand, 28297943 - 28297998
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttt 150  Q
    |||||||||||||||||| ||||||||| |||||||||||| || |||||||||||    
T  28297943 ggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttt 28297998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 44615555 - 44615480
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||| ||| ||||||| ||||||||| || ||||||||| || |||||||||||| |||| |||||||||||||    
T  44615555 ggtatgagtttggggtgggtacctatatacctgttacccgtcccatacccgtgtttttaaatcagggaaaacccaa 44615480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 44793014 - 44793089
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||| ||| ||||||| ||||||||| || ||||||||| || |||||||||||| |||| |||||||||||||    
T  44793014 ggtatgagtttggggtgggtacctatatacctgttacccgtcccatacccgtgtttttaaatcagggaaaacccaa 44793089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 166
Target Start/End: Complemental strand, 49250853 - 49250782
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaac 166  Q
    |||||||||||| ||||||||||||||| ||| |||||||| || |||||||||||||| ||  ||||||||    
T  49250853 ggtatgggttcgaggtggatacctatatacccattacccgtcccatacccgtgttttgagatcggggaaaac 49250782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 5181048 - 5181122
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||| ||||||| | ||||||| |||||||||||| || ||||||| |||||||||  |||||||||||    
T  5181048 ggtatgggtttggggtgggtgcctatatacccgttacccgtcccatacccgtattttgaaatcggggaaaaccca 5181122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 165
Target Start/End: Complemental strand, 9982970 - 9982900
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaa 165  Q
    |||||||||||||||||| ||||||||| | |||||||| | || | |||||||||||||||| |||||||    
T  9982970 ggtatgggttcggggtgggtacctatatactcgttacccatcccattcccgtgttttgaaattggggaaaa 9982900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 17134956 - 17135030
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||  | ||||||||| ||||||||||||  | |||||||||||||||||  |||||||||||    
T  17134956 ggtatgggttcggggatggtacctatatacccgttacccgtctcatacccgtgttttgaaatcggggaaaaccca 17135030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 156
Target Start/End: Original strand, 12494995 - 12495080
Alignment:
Q  72 ttttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    ||||||||||||  ||||| ||||| |||||||||| ||||| ||||||||| |||||||| ||| || || ||||||||||||||    
T  12494995 ttttctacatttgggacgggtttgggtatgggttcgaggtgggtacctatatacccgttacacgtcccatatccgtgttttgaaat 12495080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 156
Target Start/End: Original strand, 23058475 - 23058536
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||||||||||||||| ||||||||||||||||||||||  ||||| ||  |||||||||    
T  23058475 ggtatgggttcggggtgggtacctatatccccgttacccgtctcgtactcgcattttgaaat 23058536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 16237384 - 16237309
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||||||||||||||   ||| ||||||| |||||||||| || ||||||| |||||||||  ||||||||||||    
T  16237384 ggtatgggttcggggttagtacatatatcctcgttacccgtcccttacccgtattttgaaatcggggaaaacccaa 16237309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 34085244 - 34085319
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||| ||| |||| ||||||||||| | || ||| |||||||||||||  || |||||||||    
T  34085244 ggtatgggttcggggtgggtacatataaccccgttacccatcccatactcgtgttttgaaatcgggaaaaacccaa 34085319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 16433244 - 16433140
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaac------ccaatcaaaacggggaaaatcc 188  Q
    |||||||||||||||    |||||||||  ||||||||||| || |||||||||||||||||  | ||||||      |||||||||| |||||||||||    
T  16433244 ggtatgggttcggggg---tacctatatatccgttacccgtcccatacccgtgttttgaaatcggagaaaactcaaacccaatcaaaatggggaaaatcc 16433148  T
Q  189 gtcaaatt 196  Q
    ||||||||    
T  16433147 gtcaaatt 16433140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 169
Target Start/End: Complemental strand, 18354160 - 18354086
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||| ||||||||||||  || ||||| |||||||||||| || ||||| |||||||||||  |||||||||||    
T  18354160 ggtatcggttcggggtgggaacttatatacccgttacccgtcccatacccatgttttgaaatcggggaaaaccca 18354086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 168
Target Start/End: Complemental strand, 19003741 - 19003673
Alignment:
Q  100 gggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccc 168  Q
    ||||| ||||||||||| ||||||||||||| |||| || ||||||| ||||| |||  ||||||||||    
T  19003741 gggtttggggtggatacatatatccccgttatccgtcccatacccgtattttgtaatcggggaaaaccc 19003673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 20774661 - 20774701
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| |||||||||||||||||||||||||| ||||||    
T  20774661 aaacccagtcaaaacggggaaaatccgtcaaattgggtttg 20774701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 23968674 - 23968714
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    |||||||||||||| ||||||||||||||||||| ||||||    
T  23968674 aaacccaatcaaaatggggaaaatccgtcaaattgggtttg 23968714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 42439748 - 42439692
Alignment:
Q  97 tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttga 153  Q
    |||||||||||||||| ||||||||| |||||||| ||| || ||||| ||||||||    
T  42439748 tatgggttcggggtgggtacctatatacccgttactcgtcccatacccatgttttga 42439692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 206
Target Start/End: Original strand, 16409037 - 16409080
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttgatt 206  Q
    ||||||| ||||||||||||||| |||||||||| |||||||||    
T  16409037 aaacccagtcaaaacggggaaaacccgtcaaattgggtttgatt 16409080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 169
Target Start/End: Original strand, 24710875 - 24710930
Alignment:
Q  114 tacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||||| |||||||||||| || |||||||||||||| ||  |||||||||||    
T  24710875 tacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaaccca 24710930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 151
Target Start/End: Complemental strand, 41477107 - 41476976
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggattt-ggtatgggttcggggtggataccta 119  Q
    ||||||||||||||||   || ||  |||||||| | |||||| ||||||||||||| | ||   ||||| ||| ||||||| |||||||||| ||| ||    
T  41477107 aaataatttagggtttccatttctctttatataaaaagggtaacaaattgattttctgctttcgggacgggtttgggtatggattcggggtgggtacata 41477008  T
Q  120 tatccccgttacccgttccgtacccgtgtttt 151  Q
    ||||| ||||| |||| |||||| ||| ||||    
T  41477007 tatccacgttatccgtcccgtactcgtatttt 41476976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 153
Target Start/End: Original strand, 51421842 - 51421925
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttga 153  Q
    ||||| |||||||  ||||| ||||| |||||||||||||||| ||| ||||| |  ||||||||| || ||||||||||||||    
T  51421842 attttttacatttgggacgggtttgggtatgggttcggggtgggtacatatatacatgttacccgtcccatacccgtgttttga 51421925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 156
Target Start/End: Original strand, 8880408 - 8880518
Alignment:
Q  47 ttatataataggggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccg 145  Q
    ||||| || |||||||||||||| |||||   |||||  ||||| ||||| ||||||| | |||||||||||| ||||||| ||||| || | |||| ||    
T  8880408 ttataaaaaaggggtaataaatttatttttagcatttgggacgggtttgggtatgggtccagggtggatacctttatccccattacctgtcctgtactcg 8880507  T
Q  146 tgttttgaaat 156  Q
    |||||| ||||    
T  8880508 tgtttttaaat 8880518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 16903532 - 16903594
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaatt 157  Q
    |||||| ||||||||||| ||||||||||||| |||||  | |||||| |||||||| |||||    
T  16903532 ggtatgagttcggggtgggtacctatatccccattacctatcccgtactcgtgttttaaaatt 16903594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 156
Target Start/End: Complemental strand, 25154952 - 25154846
Alignment:
Q  51 ataataggggtaataaattgattttctacatttatgacggatttggt-atgggttcggggtggatacctatatccccgttacccgttccgtacccgtgtt 149  Q
    |||| ||||||| | ||||||||||||| ||| | ||||| |||||  ||| |||||  |||| ||| ||||||||| |||| ||| |||||| ||||||    
T  25154952 ataaaaggggtagtgaattgattttctaaattcaggacgggtttgggcatgagttcgaagtgggtacttatatccccattactcgtcccgtactcgtgtt 25154853  T
Q  150 ttgaaat 156  Q
    |||||||    
T  25154852 ttgaaat 25154846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 33293590 - 33293536
Alignment:
Q  116 cctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||||||||| |||||||| || |||||||||||||||||  || |||||||||    
T  33293590 cctatatccccattacccgtcccatacccgtgttttgaaatcgggaaaaacccaa 33293536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 166
Target Start/End: Complemental strand, 35069968 - 35069898
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaac 166  Q
    ||||||||||||||||| ||| |||||||| |||||||||   |||||||| || ||||||  ||||||||    
T  35069968 gtatgggttcggggtgggtacatatatccctgttacccgtcttgtacccgtattatgaaatcggggaaaac 35069898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 170
Target Start/End: Complemental strand, 35936904 - 35936834
Alignment:
Q  100 gggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||| ||||||| ||||||||| ||||||| |||| || ||| |||| ||||||||  ||||||||||||    
T  35936904 gggtttggggtgggtacctatatacccgttatccgtcccatactcgtgatttgaaatcggggaaaacccaa 35936834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 95 - 156
Target Start/End: Complemental strand, 34060105 - 34060044
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    ||||||||||||| |||| ||||||||| || |||| ||||  | |||||||||||||||||    
T  34060105 ggtatgggttcggagtgggtacctatatacctgttatccgtctcatacccgtgttttgaaat 34060044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 95 - 156
Target Start/End: Complemental strand, 42707916 - 42707856
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||||||||||| ||  ||| ||||| |||||||||||| || |||||||||||||||||    
T  42707916 ggtatgggttcggg-tgagtacttatattcccgttacccgtcccatacccgtgttttgaaat 42707856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 19572506 - 19572466
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| |||||| |||||||| |||||||||||||||||    
T  19572506 aaacccagtcaaaatggggaaaacccgtcaaattaggtttg 19572466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 23966883 - 23966919
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacc 132  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  23966883 gtatgggttcggggtgggtacctatatacccgttacc 23966919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 170
Target Start/End: Complemental strand, 29871390 - 29871290
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||||||||   ||||| ||||| |||| |||| |||||| ||||||||| || |||||| || || ||||| |||||||||||  | |||||||||    
T  29871390 attttctacattcgggacgggtttgggtatgagttcagggtgggtacctatataccagttacctgtcccatacccatgttttgaaatcggagaaaaccca 29871291  T
Q  170 a 170  Q
    |    
T  29871290 a 29871290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 6e-24; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 156
Target Start/End: Complemental strand, 21956969 - 21956834
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggataccta 119  Q
    |||| ||||||||||||||||  |  |||||||| |||| ||||||||||||||||||||||  | |||  ||||| ||||||||||||||||  |||||    
T  21956969 aaatgatttagggtttgggtttttatttatataaaaggg-taataaattgattttctacattcgtaacgagtttgggtatgggttcggggtgggcaccta 21956871  T
Q  120 tatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||||||||| | ||||||||||||||||| ||||    
T  21956870 tatccccgttactcattccgtacccgtgttttaaaat 21956834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 47 - 170
Target Start/End: Complemental strand, 25298963 - 25298839
Alignment:
Q  47 ttatataataggggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccg 145  Q
    ||||| || |||||| |||||||||||||| ||||||   |||| ||||| ||||||||||||||||| | |||||||||| |||||| | |||||||||    
T  25298963 ttataaaaaaggggtgataaattgattttcaacatttggtacgggtttgggtatgggttcggggtggacagctatatccccattacccatcccgtacccg 25298864  T
Q  146 tgttttgaaattagggaaaacccaa 170  Q
    |||||||||||  || |||||||||    
T  25298863 tgttttgaaatccggaaaaacccaa 25298839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 25941082 - 25941227
Alignment:
Q  26 atttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggatacctatatcc 124  Q
    |||||||  ||||||| ||  |||||||| |||||| |||||||||||||||||||    |||   ||||| |||||||||||||||| ||||||| | |    
T  25941082 atttaggccttgggtttctatttatataaaaggggttataaattgattttctacatccgagacatgtttgggtatgggttcggggtgggtacctatcttc 25941181  T
Q  125 ccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||| || ||||||||||||||||||||  || |||||||||    
T  25941182 ccgttacctgtcccgtacccgtgttttgaaatcgggaaaaacccaa 25941227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 64 - 170
Target Start/End: Complemental strand, 19883169 - 19883062
Alignment:
Q  64 taaattgattttctacatttatgacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattaggga 162  Q
    |||||||||||| ||||||   ||||  |||| |||| ||||||||||||||||||||||||||||||||| | ||||| ||||||||| ||||  ||||    
T  19883169 taaattgattttatacattcgggacgagtttgtgtatcggttcggggtggatacctatatccccgttacccttcccgtatccgtgttttaaaatcgggga 19883070  T
Q  163 aaacccaa 170  Q
    ||||||||    
T  19883069 aaacccaa 19883062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 29527826 - 29527901
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||| ||| ||||||||||||||||||  ||||||||| |||||||||  ||||||||||||    
T  29527826 ggtatgggttcggggtgggtacatatatccccgttacccgtcacgtacccgtattttgaaatcggggaaaacccaa 29527901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 151
Target Start/End: Complemental strand, 33516228 - 33516097
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggataccta 119  Q
    |||| |||||||||||| |||  |  |||||||| |||||||||| ||||||||| |||||||  ||||| ||||| ||| |||||||||||| ||| ||    
T  33516228 aaatgatttagggtttgagtttttatttatataaaaggggtaatacattgattttttacatttgagacgggtttgggtataggttcggggtgggtactta 33516129  T
Q  120 tatccccgttacccgttccgtacccgtgtttt 151  Q
    |||||| ||||||| |  ||||||||||||||    
T  33516128 tatccctgttacccatctcgtacccgtgtttt 33516097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 47103752 - 47103827
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||| ||| ||||||| |||||||||  |||||||||| |||||||||| ||||||||||||    
T  47103752 ggtatgggttcggggtgggtacatatatccgcgttacccgccccgtacccgtattttgaaattggggaaaacccaa 47103827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 48459495 - 48459569
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||||| ||||||||| || |||||||||||| ||||| |||||||||||  |||||||||||    
T  48459495 ggtatgggttcggggtgggtacctatatacctgttacccgttccatacccatgttttgaaatcggggaaaaccca 48459569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 1724391 - 1724316
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||| |||||||||  ||||||||||| || ||||| |||||||||||  ||||||||||||    
T  1724391 ggtatgggttcggggtgggtacctatataaccgttacccgtcccatacccatgttttgaaatcggggaaaacccaa 1724316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 103 - 170
Target Start/End: Original strand, 37107433 - 37107499
Alignment:
Q  103 ttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||| ||||||||| |||||||||||| || |||||||||||||||||| ||||||||||||    
T  37107433 ttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatt-gggaaaacccaa 37107499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 169
Target Start/End: Complemental strand, 5902695 - 5902621
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||||| ||||||||| |||||||||||| || ||||||||||| || ||  |||||||||||    
T  5902695 ggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaaccca 5902621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 153
Target Start/End: Complemental strand, 6382353 - 6382295
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttga 153  Q
    |||||||||||||||||| ||||||||| |||||||||||| || ||||||||||||||    
T  6382353 ggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttga 6382295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 7608984 - 7609058
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||||| ||||||||| |||||||||||| || ||||||||||| || ||  |||||||||||    
T  7608984 ggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaaccca 7609058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 11028087 - 11028161
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||| ||||||||||| ||||||||| |||||||||||| || |||||||||||||| ||  |||||||||||    
T  11028087 ggtatgagttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaaccca 11028161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 156
Target Start/End: Original strand, 36306750 - 36306860
Alignment:
Q  47 ttatataataggggtaataaattgattttctacatttatgacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccg 145  Q
    |||||||| |||||||||||||||||||||||||||   ||||| |||| || | | |||||| | | ||||||||||||||||| ||||  | ||||||    
T  36306750 ttatataaaaggggtaataaattgattttctacattcgggacgggtttgagtgtagcttcgggttaggtacctatatccccgttaaccgtctcatacccg 36306849  T
Q  146 tgttttgaaat 156  Q
    |||||||||||    
T  36306850 tgttttgaaat 36306860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 154
Target Start/End: Original strand, 42907826 - 42907959
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggataccta 119  Q
    |||| |||||||||||| ||| ||  |||||||| || | || |||||||||||||||||||   ||||  ||||| |||||| ||||||||| ||||||    
T  42907826 aaatgatttagggtttgagtttctatttatataaaagag-tagtaaattgattttctacattcgggacgagtttgggtatgggctcggggtgggtaccta 42907924  T
Q  120 tatccccgttacccgttccgtacccgtgttttgaa 154  Q
    ||||||| |||| ||| ||||| ||||||||||||    
T  42907925 tatccccattactcgtcccgtatccgtgttttgaa 42907959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 44317549 - 44317623
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||||| ||||||||| |||||||||||| || ||||||||||| || ||  |||||||||||    
T  44317549 ggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaaccca 44317623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 95 - 156
Target Start/End: Complemental strand, 30266411 - 30266350
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||||||||||||||||||| |||||||||||||||||| | |||||||| || ||||||    
T  30266411 ggtatgggttcggggtggatacatatatccccgttacccgtcctgtacccgtattatgaaat 30266350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 95 - 156
Target Start/End: Original strand, 30285777 - 30285838
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||||||||||||||||||| |||||||||||||||||| | |||||||| || ||||||    
T  30285777 ggtatgggttcggggtggatacatatatccccgttacccgtcctgtacccgtattatgaaat 30285838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 166
Target Start/End: Complemental strand, 47550459 - 47550363
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaac 166  Q
    ||||| |||||||  ||||| ||||| |||||||||||||||| ||||||||| || ||||||||| || |||||||||||||| ||  ||||||||    
T  47550459 attttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacctgttacccgtcccatacccgtgttttgagatcggggaaaac 47550363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 6482116 - 6482041
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||| ||| ||||| ||| |||| ||| || |||||||||||| ||||| ||||||||||||    
T  6482116 ggtatgggttcggggtgggtacatatataccctttactcgtcccatacccgtgtttttaaattggggaaaacccaa 6482041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 72 - 150
Target Start/End: Complemental strand, 11122974 - 11122895
Alignment:
Q  72 ttttctacatttatgacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttt 150  Q
    |||| |||||||  ||||| |||| ||||||||||||||||| ||||||||| |||||||||||| || |||||||||||    
T  11122974 ttttttacatttgggacgggtttgagtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttt 11122895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 14606006 - 14605931
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||| ||| |||||||| |||||||||  ||||||||| |||||||||  | ||||||||||    
T  14606006 ggtatgggttcggggtgggtacatatatccctgttacccgtctcgtacccgtattttgaaatcggagaaaacccaa 14605931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 31782627 - 31782702
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||| ||| ||||||| ||| ||||||||||||||| || |||||||||| |||||||||  ||||||||||||    
T  31782627 ggtatgagtttggggtgggtacatatatccccgttacctgtaccgtacccgtattttgaaatcggggaaaacccaa 31782702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 21 - 170
Target Start/End: Complemental strand, 35304672 - 35304522
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatt-tatgacggatttgg-tatgggttcggggtggatacct 118  Q
    |||| |||||| ||||| ||| ||  |||||||| |||| |||||||||||||| ||||||| | ||| |  ||||| |||| ||| ||||| | |||||    
T  35304672 aaatgatttagagtttgagtttctttttatataaaaggg-taataaattgatttcctacattctttgatgagtttgggtatgagtttggggtaggtacct 35304574  T
Q  119 atatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||||||||||||||| ||||||   |||||| ||||||| ||||||||||    
T  35304573 atatccccgttacccgtcccgtacttatgttttaaaattagagaaaacccaa 35304522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 169
Target Start/End: Complemental strand, 1866630 - 1866556
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||||||||| ||||||| | ||||||||  ||||||||| |||||||||  || ||||||||    
T  1866630 ggtatgggttcggggtggatacatatatccgcattacccgtctcgtacccgtattttgaaatcgggaaaaaccca 1866556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 156
Target Start/End: Complemental strand, 8843934 - 8843825
Alignment:
Q  47 ttatataataggggtaataaattgattttctacatttatgacggattt-ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccg 145  Q
    |||||| | |||||||||||||| |||||||||||| | ||||| ||| |||||| |||| |||||| || ||||||||||| ||||||| ||| ||| |    
T  8843934 ttatatgaaaggggtaataaattaattttctacattcacgacgggtttgggtatgagttc-gggtgggtatctatatccccgctacccgtcccgcacctg 8843836  T
Q  146 tgttttgaaat 156  Q
    |||||| ||||    
T  8843835 tgttttaaaat 8843825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 156
Target Start/End: Complemental strand, 8856898 - 8856789
Alignment:
Q  47 ttatataataggggtaataaattgattttctacatttatgacggattt-ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccg 145  Q
    |||||| | |||||||||||||| |||||||||||| | ||||| ||| |||||| |||| |||||| || ||||||||||| ||||||| ||| ||| |    
T  8856898 ttatatgaaaggggtaataaattaattttctacattcacgacgggtttgggtatgagttc-gggtgggtatctatatccccgctacccgtcccgcacctg 8856800  T
Q  146 tgttttgaaat 156  Q
    |||||| ||||    
T  8856799 tgttttaaaat 8856789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 169
Target Start/End: Original strand, 21423851 - 21423949
Alignment:
Q  72 ttttctacatttatgacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||| |||||||  ||||| |||| ||||||||| ||||||| ||||||||| ||||||||||||  | ||||||||||| || ||| |||||||||||    
T  21423851 ttttttacatttgggacgggtttgtgtatgggtttggggtgggtacctatatacccgttacccgtctcatacccgtgtttcgagattggggaaaaccca 21423949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 169
Target Start/End: Complemental strand, 55826728 - 55826630
Alignment:
Q  72 ttttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||| |||||||  ||||| ||||| |||||||||||||||| ||||||||| |||||||||||| || |||| |||||| || ||  |||||||||||    
T  55826728 ttttttacatttgggacgggtttggatatgggttcggggtgggtacctatatacccgttacccgtcccatacctgtgtttcgagatcggggaaaaccca 55826630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 168
Target Start/End: Original strand, 3737790 - 3737863
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccc 168  Q
    |||||||||||||| ||| ||| |||| || |||||||||| || |||||||||||||||||| || |||||||    
T  3737790 ggtatgggttcgggatgggtacatataacctcgttacccgtcccatacccgtgttttgaaattgggaaaaaccc 3737863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 156
Target Start/End: Original strand, 21544593 - 21544654
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||||||||||||||| ||| ||||||||| ||||| || |||||||||| |||||||||    
T  21544593 ggtatgggttcggggtgggtacatatatccccattacctgtcccgtacccgtattttgaaat 21544654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 156
Target Start/End: Original strand, 26564845 - 26564906
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    ||||||| |||||||||| ||||||||| |||||||||||| || |||||| ||||||||||    
T  26564845 ggtatggtttcggggtgggtacctatatacccgttacccgtcccatacccgcgttttgaaat 26564906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 156
Target Start/End: Original strand, 32585503 - 32585564
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    ||||||||||| |||||| ||||||||| ||||||||| || || |||||||||||||||||    
T  32585503 ggtatgggttcagggtgggtacctatatacccgttacctgtcccatacccgtgttttgaaat 32585564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 166
Target Start/End: Complemental strand, 9929285 - 9929177
Alignment:
Q  59 ggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaatt 157  Q
    ||||||||||||||||||||| || | ||||  ||||| || | ||||||||||| |||||||||||  ||||||||| |  ||||||| |||||||||     
T  9929285 ggtaataaattgattttctactttcaggacgattttgggtaagagttcggggtgggtacctatatccatgttacccgtactatacccgtattttgaaatc 9929186  T
Q  158 agggaaaac 166  Q
    ||| |||||    
T  9929185 aggaaaaac 9929177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 12825542 - 12825467
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||| ||||| |||||| ||| |||||  ||||||||||| || |||||||||||||||||  ||||||||||||    
T  12825542 ggtataggttcagggtgggtacgtatatatccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaa 12825467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 166
Target Start/End: Complemental strand, 15987343 - 15987272
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaac 166  Q
    |||||||||||||||||| || |||||| |||||||||| | || |||||||||||| ||||  ||||||||    
T  15987343 ggtatgggttcggggtgggtatctatatacccgttacccatcccatacccgtgttttaaaatctgggaaaac 15987272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 150
Target Start/End: Original strand, 43893250 - 43893297
Alignment:
Q  103 ttcggggtggatacctatatccccgttacccgttccgtacccgtgttt 150  Q
    |||||||||||||||||||| |||||||||||| || |||||||||||    
T  43893250 ttcggggtggatacctatatacccgttacccgtcccatacccgtgttt 43893297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 206
Target Start/End: Original strand, 44317635 - 44317678
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttgatt 206  Q
    ||||||| |||||||||||||||||||||||||| |||||||||    
T  44317635 aaacccagtcaaaacggggaaaatccgtcaaattgggtttgatt 44317678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 47 - 167
Target Start/End: Original strand, 10302048 - 10302170
Alignment:
Q  47 ttatataatagg-ggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtaccc 144  Q
    |||||||| ||| ||||| ||| | ||||| |||||||  ||||||| ||| |||||||||||||||| ||| |||| |||||||||||||  | |||||    
T  10302048 ttatataaaaggtggtaaaaaagtaattttttacatttgggacggatatgggtatgggttcggggtgggtacatataaccccgttacccgtctcataccc 10302147  T
Q  145 gtgttttgaaattagggaaaacc 167  Q
    ||  ||||||||  |||||||||    
T  10302148 gtactttgaaatcggggaaaacc 10302170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 21714139 - 21714069
Alignment:
Q  13 tgtaagtaaaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacattt 83  Q
    ||||||| |||| |||||||||||| ||| ||  |||||||| || ||||||||||| |||||||||||||    
T  21714139 tgtaagtgaaatgatttagggtttgagtttctatttatataaaagaggtaataaattaattttctacattt 21714069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 31752470 - 31752544
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||||||||||||||  |||||||| | |||||| |||  | |||||||||||||||||  |||||||||||    
T  31752470 ggtatgggttcggggtgggaacctatatactcgttactcgtctcatacccgtgttttgaaatcggggaaaaccca 31752544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 39046966 - 39047040
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||| || |||| ||||||||| ||||||||  || || ||||||||||| |||||| |||||||||||    
T  39046966 ggtatgggtttggagtgggtacctatatacccgttacatgtcccatacccgtgtttggaaattggggaaaaccca 39047040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 168
Target Start/End: Complemental strand, 32596245 - 32596192
Alignment:
Q  115 acctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccc 168  Q
    |||||||| |||||||||||| || |||||||||||||||||  ||||||||||    
T  32596245 acctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaaccc 32596192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 156
Target Start/End: Complemental strand, 47239466 - 47239405
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    ||||||||||| ||||||  |||||||| |||||||||||| || |||||||||||| ||||    
T  47239466 ggtatgggttcagggtgggaacctatatacccgttacccgtcccatacccgtgttttaaaat 47239405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 208
Target Start/End: Complemental strand, 10574500 - 10574381
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattaggga------aaacccaatcaaaacggggaaaatcc 188  Q
    |||||| |||||||| || ||| |||||||||||||||||| ||||||| || || ||||||  ||||      ||||||| ||||| ||||||||| ||    
T  10574500 ggtatgagttcggggcgggtacatatatccccgttacccgtcccgtacctgtattatgaaatcggggaaaattcaaacccagtcaaatcggggaaaaccc 10574401  T
Q  189 gtcaaattaggtttgatttg 208  Q
    |||||||  || ||||||||    
T  10574400 gtcaaatcgggattgatttg 10574381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 156
Target Start/End: Original strand, 16575088 - 16575187
Alignment:
Q  58 gggtaataaattgattttctacatttatgacg-gatttggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||||||||| ||||| |||||||| |||| | || ||||| ||||||| |||| ||| ||||||| ||||| || | ||||||||| ||||| ||||    
T  16575088 gggtaataaattaattttttacatttaagacgagtttgggtataggttcggagtgggtacttatatcctcgttatccatcccgtacccgcgttttaaaat 16575187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 108
Target Start/End: Original strand, 30034613 - 30034700
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttggtatgggttcggg 108  Q
    |||| |||||||||||||||| ||  ||||||||  | |||| ||||||||||||  |||||   ||||||||||||||| |||||||    
T  30034613 aaatgatttagggtttgggtttctatttatataaatgaggtagtaaattgatttttaacattcgagacggatttggtatgagttcggg 30034700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 82
Target Start/End: Complemental strand, 33616245 - 33616210
Alignment:
Q  47 ttatataataggggtaataaattgattttctacatt 82  Q
    |||||||| |||||||||||||||||||||||||||    
T  33616245 ttatataaaaggggtaataaattgattttctacatt 33616210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 156
Target Start/End: Complemental strand, 15733600 - 15733546
Alignment:
Q  102 gttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    ||||||||||| ||| |||||| |||||||||||  ||||||||| |||||||||    
T  15733600 gttcggggtgggtacatatatctccgttacccgtctcgtacccgtattttgaaat 15733546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 169
Target Start/End: Complemental strand, 31918639 - 31918565
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||||| || |||||| ||| |||| ||| || ||||||||||| || ||  |||||||||||    
T  31918639 ggtatgggttcggggtgggtaactatatacccattactcgtcccatacccgtgtttcgagatcggggaaaaccca 31918565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 31416008 - 31415951
Alignment:
Q  99 tgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||||||||||| ||| |||||||| |||| || | |||||||||| |||||||||    
T  31416008 tgggttcggggtgggtacatatatccctgttatccatcccgtacccgtattttgaaat 31415951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 196
Target Start/End: Original strand, 39086257 - 39086290
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaatt 196  Q
    ||||||||||||||||| ||||||||||||||||    
T  39086257 aaacccaatcaaaacggagaaaatccgtcaaatt 39086290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 40420741 - 40420680
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatt 82  Q
    |||| |||| |||||| |||| ||  |||||||| |||||||||||| ||||||||||||||    
T  40420741 aaatgatttggggttttggtttctatttatataaaaggggtaataaagtgattttctacatt 40420680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 165
Target Start/End: Original strand, 42299805 - 42299872
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaa 165  Q
    |||||||||| |||||| ||||||||| ||||||||||| ||| || ||||||||||||||  |||||||    
T  42299805 gtatgggttcagggtgggtacctatatacccgttacccg-tccata-ccgtgttttgaaatcggggaaaa 42299872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 3505301 - 3505353
Alignment:
Q  114 tacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaac 166  Q
    ||||||||||||||| ||||||| ||||||| | |||| ||||| ||||||||    
T  3505301 tacctatatccccgtaacccgtttcgtacccatattttaaaattggggaaaac 3505353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 156
Target Start/End: Complemental strand, 4741296 - 4741236
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    ||||||||||||||||| ||| |||||||| |||| |||| || ||||| |||||| ||||    
T  4741296 gtatgggttcggggtgggtacttatatccctgttatccgtcccatacccatgttttaaaat 4741236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 31918553 - 31918513
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| ||||||||||||||| |||||||||| ||||||    
T  31918553 aaacccagtcaaaacggggaaaacccgtcaaattgggtttg 31918513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 135
Target Start/End: Original strand, 37349137 - 37349177
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgt 135  Q
    ||||||||||| |||||||||||||||| ||| ||||||||    
T  37349137 ggtatgggttcagggtggatacctatatacccattacccgt 37349177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 166
Target Start/End: Original strand, 37384238 - 37384357
Alignment:
Q  47 ttatataataggggtaataaattgattttctacatttatgacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccg 145  Q
    |||||||| |||| ||||||||||| |||||| ||||  ||||| |||| ||||||||| |||||||||   ||||||| |||| |  ||  ||||||||    
T  37384238 ttatataaaagggataataaattga-tttctatatttgggacgggtttgtgtatgggtttggggtggatgaatatatcctcgttgcatgtcacgtacccg 37384336  T
Q  146 tgttttgaaattagggaaaac 166  Q
    |||||| ||||| | ||||||    
T  37384337 tgttttaaaattggagaaaac 37384357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 39375303 - 39375367
Alignment:
Q  106 ggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||| |||||| |||||||||||| |  ||||||| |||||||||  ||||||| ||||    
T  39375303 ggggtggatatctatatacccgttacccgtcctatacccgtattttgaaatcggggaaaagccaa 39375367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 170
Target Start/End: Complemental strand, 41915054 - 41915002
Alignment:
Q  118 tatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||| | |||||||| | |||||||||  ||||||||||||    
T  41915054 tatatccccgttacccttcccgtacccatattttgaaatcggggaaaacccaa 41915002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 170
Target Start/End: Original strand, 43309520 - 43309572
Alignment:
Q  118 tatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||| ||||||||||||| || |||||||||||||||||  || |||||||||    
T  43309520 tataaccccgttacccgtcccatacccgtgttttgaaatcgggaaaaacccaa 43309572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 43893327 - 43893367
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| ||||||||||||||| |||||||||| ||||||    
T  43893327 aaacccagtcaaaacggggaaaacccgtcaaattgggtttg 43893367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 2e-23; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 3774003 - 3774122
Alignment:
Q  17 agtaaaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttg-gtatgggttcggggtggata 115  Q
    |||||||| |||| | ||||||||| ||  |||||||| ||||||||||||||||||||||| |||   |||||||||| |||||||||| |||||| ||    
T  3774003 agtaaaatgattttgcgtttgggttcctaattatataaaaggggtaataaattgattttctaaattcgggacggatttgagtatgggttcagggtgggta 3774102  T
Q  116 cctatatccccgttacccgt 135  Q
    ||||||||| ||||||||||    
T  3774103 cctatatcctcgttacccgt 3774122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 26 - 167
Target Start/End: Original strand, 3157026 - 3157168
Alignment:
Q  26 atttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggattt-ggtatgggttcggggtggatacctatatcc 124  Q
    ||||||| |||||||| ||  ||||||| ||||||||||||||||||||||||  |||  ||||| ||| ||||| ||||||| |||| |||||||||||    
T  3157026 atttaggatttgggtttctatttatatagtaggggtaataaattgattttctatgtttgggacgggtttgggtataggttcggtgtgggtacctatatcc 3157125  T
Q  125 ccgttacccgttccgtacccgtgttttgaaattagggaaaacc 167  Q
    |||||| |||| || ||||| | |||||||||  |||||||||    
T  3157126 ccgttatccgtcccatacccatattttgaaatcggggaaaacc 3157168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 10072479 - 10072553
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||  |||||||||||    
T  10072479 ggtatgggttcggggtgggtacctatatacccgttacccgttccatacccgtgttttgaaatcggggaaaaccca 10072553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 71 - 166
Target Start/End: Original strand, 30650619 - 30650715
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaac 166  Q
    ||||| |||||||  ||||||||||| |||||||||||||||| ||||||||| |||||||||||| || |||||||||||||| ||| ||||||||    
T  30650619 attttttacatttgggacggatttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagattggggaaaac 30650715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 95 - 156
Target Start/End: Original strand, 32546205 - 32546266
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||    
T  32546205 ggtatgggttcggggtgggtacatatatccccgttacccgttccgtacccgtattttgaaat 32546266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 24425396 - 24425507
Alignment:
Q  98 atgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattaggga------aaacccaatcaaaacggggaaaatccgtc 191  Q
    ||||| || |||||| ||||||||| |||||||||||| || ||||||||||||||||| || ||      ||||||||||||||||| |||||||||||    
T  24425396 atggggtcagggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcagagaaaattcaaacccaatcaaaacggagaaaatccgtc 24425495  T
Q  192 aaattaggtttg 203  Q
    ||||| ||||||    
T  24425496 aaattgggtttg 24425507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 18825952 - 18825877
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||| ||||||||||||| ||||||||| |||||||||||| || |||||||||||||||||  ||||||||||||    
T  18825952 ggtacgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaa 18825877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 95 - 194
Target Start/End: Original strand, 26622964 - 26623069
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa------tcaaaacggggaaaatcc 188  Q
    |||||||||||||||||| ||| ||||| ||| |||||| | || ||||||||||||||||| |||||||||||||      ||||||||||||||||||    
T  26622964 ggtatgggttcggggtgggtacttatatacccattacccatcccatacccgtgttttgaaatcagggaaaacccaaacccactcaaaacggggaaaatcc 26623063  T
Q  189 gtcaaa 194  Q
    | ||||    
T  26623064 gacaaa 26623069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 169
Target Start/End: Complemental strand, 3227025 - 3226952
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||||||||||||| ||||||||| || ||||||||| || |||||||||||||||||  |||||||||||    
T  3227025 gtatgggttcggggtgggtacctatattcctgttacccgtcccatacccgtgttttgaaatcggggaaaaccca 3226952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 168
Target Start/End: Original strand, 18683987 - 18684060
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccc 168  Q
    |||||||||||| ||||||||| |||||||| ||||||||| |||||||||| |||||||||  ||||||||||    
T  18683987 ggtatgggttcgaggtggatacatatatccctgttacccgtcccgtacccgtattttgaaatcggggaaaaccc 18684060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 21 - 165
Target Start/End: Original strand, 29292640 - 29292787
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacg-gatttggtatgggttcggggtgg--atacc 117  Q
    |||||||||||||||||| || ||  |||||||| ||||||| |||||||||||||||||||   |||| | || ||||||||||  ||||||   ||||    
T  29292640 aaataatttagggtttggatttctctttatataaaaggggtagtaaattgattttctacattcgagacgagtttaggtatgggtttagggtgggcgtacc 29292739  T
Q  118 tatatccccgttacccgttccgtacccgtgttttgaaattagggaaaa 165  Q
    |||||||  ||||||| |  |||||||||||||||||||  |||||||    
T  29292740 tatatccatgttacccatctcgtacccgtgttttgaaatcggggaaaa 29292787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 5377098 - 5377173
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||| ||||||||| ||| |||||||| || |||| ||||||||||||  ||||||||||||    
T  5377098 ggtatgggttcggggtgggtacctatataccctttacccgtcccatacctgtgttttgaaatcggggaaaacccaa 5377173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 16866157 - 16866256
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||| |||||||  ||||| ||||| |||||||||||||||| ||||||||| |||||||| ||| || |||||||||||||| ||  |||||||||||    
T  16866157 attttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttactcgtcccatacccgtgttttgagatcggggaaaaccca 16866256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 71 - 169
Target Start/End: Complemental strand, 27850431 - 27850332
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||||||||   ||||| ||||| |||||||||||| ||| ||||||||  |||||||||||| || |||||||||||||||||  |||||||||||    
T  27850431 attttctacattcgggacgggtttgggtatgggttcgggatgggtacctatacacccgttacccgtcccatacccgtgttttgaaatcggggaaaaccca 27850332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 28309505 - 28309580
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||| ||||||||| ||||| ||||| |||||||||||| |||||||||| ||||||||| ||||| |||||||    
T  28309505 ggtatgagttcggggtagatacatatattcccgttacccgtcccgtacccgtattttgaaatcagggagaacccaa 28309580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 38152875 - 38152974
Alignment:
Q  71 attttctacatttatgacggattt-ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||| |||||||  ||||| ||| |||||||||||||||||| |||||||||  |||||| ||||||| ||||| |||||||||||  |||||||||||    
T  38152875 attttttacatttgggacgggtttaggtatgggttcggggtgggtacctatatagccgttatccgttccatacccatgttttgaaatcggggaaaaccca 38152974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 41103644 - 41103743
Alignment:
Q  71 attttctacatttatgacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||| |||||||| ||||| |||  ||||||||||||||||| ||| ||||| ||||||| |||| || |||||||||||||||||  |||||||||||    
T  41103644 attttttacatttaggacgggtttatgtatgggttcggggtgggtacttatatacccgttaaccgtcccatacccgtgttttgaaatcggggaaaaccca 41103743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 21702672 - 21702746
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||||| ||||||||| |||||||||||| || ||||||||||| || ||  |||||||||||    
T  21702672 ggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaaccca 21702746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 45380120 - 45380194
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||||| ||||||||| |||||||||||| || ||||||| |||||||||  || ||||||||    
T  45380120 ggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtattttgaaatcgggaaaaaccca 45380194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 167
Target Start/End: Original strand, 12980390 - 12980462
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacc 167  Q
    |||||||||||||||||| ||| ||||| ||| |||||||| || |||||||||||||||||  |||||||||    
T  12980390 ggtatgggttcggggtgggtacttatatacccattacccgtcccatacccgtgttttgaaatcggggaaaacc 12980462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 39456089 - 39456021
Alignment:
Q  101 ggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||| ||||||||| |||||||||||| || ||||| |||||||||||  |||||||||||    
T  39456089 ggttcggggtgggtacctatatacccgttacccgtcccatacccatgttttgaaatcggggaaaaccca 39456021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 166
Target Start/End: Complemental strand, 45885870 - 45885774
Alignment:
Q  71 attttctacatttatgacggattt-ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaac 166  Q
    ||||| |||||||  ||||||||| |||||||||||||||||| ||||||||| |  ||||||||| || |||||||||||||| ||  ||||||||    
T  45885870 attttttacatttgggacggattttggtatgggttcggggtgggtacctatatacttgttacccgtcccatacccgtgttttgagatcggggaaaac 45885774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 3920551 - 3920626
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||| ||||||||| || |||| |||| || |||| ||||||||||||  ||||||||||||    
T  3920551 ggtatgggttcggggtgggtacctatatacctgttatccgtcccataccagtgttttgaaatcggggaaaacccaa 3920626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 31426021 - 31426096
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||| ||||||||||||||| ||||||||||||||||||  | ||||||| |||| ||||  ||||||||||||    
T  31426021 ggtatgcgttcggggtggatacatatatccccgttacccgtctcatacccgtatttttaaatcggggaaaacccaa 31426096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 35074483 - 35074557
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||| ||| ||||||||| |||||||||||| || |||||||||||| | ||  |||||||||||    
T  35074483 ggtatgggttcgggttgggtacctatatacccgttacccgtcccatacccgtgttttaagatcggggaaaaccca 35074557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 169
Target Start/End: Complemental strand, 38139896 - 38139798
Alignment:
Q  72 ttttctacatttatgacggatttggt-atgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||| |||||||  ||||| |||||| ||||||||||||||| ||| ||||| | | |||||||| || ||| |||||||||||||| |||||||||||    
T  38139896 ttttttacatttgagacgggtttggttatgggttcggggtgggtacttatatactcattacccgtcccatactcgtgttttgaaattggggaaaaccca 38139798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 156
Target Start/End: Complemental strand, 44734462 - 44734376
Alignment:
Q  71 attttctacatttatgacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    ||||| |||||||  ||||||| || ||||||||||||||||| ||||||||| ||| ||||| || || |||||||||||||||||    
T  44734462 attttttacatttgggacggatatgtgtatgggttcggggtgggtacctatatacccattaccggtcccatacccgtgttttgaaat 44734376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 206
Target Start/End: Complemental strand, 43550571 - 43550380
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttg-gtatgggttcggggtggataccta 119  Q
    |||| |||||||||||||||| ||  |||||||  ||||||||||||| || |||| ||||| | ||||| |||| ||||| ||||||| ||  ||| ||    
T  43550571 aaatgatttagggtttgggtttctatttatatagaaggggtaataaatagactttccacattcaggacgggtttgtgtatgagttcggg-tgagtacata 43550473  T
Q  120 tatccccgttacccgttccgtacccgtgttttgaaattagggaaaac------ccaatcaaaacggggaaaatccgtcaaattaggtttgatt 206  Q
    ||||||  ||||| ||  |||| | ||||||| |||   ||||||||      |||||||||| |||||||| ||||||||||||||||||||    
T  43550472 tatccctattaccagtctcgtatctgtgttttaaaaacggggaaaactcaaacccaatcaaaatggggaaaacccgtcaaattaggtttgatt 43550380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 170
Target Start/End: Original strand, 4101518 - 4101630
Alignment:
Q  59 ggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaatt 157  Q
    |||||||||||||||||| ||||| | ||||| || || ||||||||| || ||| ||| |||||||| || |||| | | ||||| ||||||||||||     
T  4101518 ggtaataaattgattttcaacattcaggacgggttagggtatgggttcaggatgggtacatatatccctgtaacccatcctgtacctgtgttttgaaatc 4101617  T
Q  158 agggaaaacccaa 170  Q
    | |||||||||||    
T  4101618 atggaaaacccaa 4101630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 10995914 - 10995839
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||| ||  |||| ||| ||||||||| || ||||||||| |||||||  ||||||||||||    
T  10995914 ggtatgggttcggggtgggtatatataaccctgttacccgtcccatacccgtgtcttgaaatcggggaaaacccaa 10995839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 150
Target Start/End: Complemental strand, 18125308 - 18125253
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttt 150  Q
    |||||| ||||||||||| ||||||||| |||||||||||| || |||||||||||    
T  18125308 ggtatgcgttcggggtgggtacctatatacccgttacccgtcccatacccgtgttt 18125253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 22973401 - 22973476
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||| ||||| |||  |||||||| |||||||| |||||||||| |||||||||   |||||||||||    
T  22973401 ggtatgggttcgaggtgggtacagatatccccattacccgtcccgtacccgtattttgaaatcgtggaaaacccaa 22973476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 27896555 - 27896480
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||| ||||||||| | | | |||| ||||||||||||| || ||||| ||||||||||| |||||||||||||    
T  27896555 ggtatgagttcggggttggtgcatataaccccgttacccgtcccatacccatgttttgaaataagggaaaacccaa 27896480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 7780021 - 7780095
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||| |||||||||||| ||||||||| ||| ||| |||| || |||||||||||||| ||  |||||||||||    
T  7780021 ggtataggttcggggtgggtacctatatacccattatccgtcccatacccgtgttttgagatcggggaaaaccca 7780095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 165
Target Start/End: Complemental strand, 10990929 - 10990871
Alignment:
Q  107 gggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaa 165  Q
    |||||||||||||||||||  |||||||| |||||||||| |||||||||  |||||||    
T  10990929 gggtggatacctatatccctattacccgtcccgtacccgtattttgaaatcggggaaaa 10990871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 17885478 - 17885552
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||| |  |||||||| |||||||||||| || ||||| |||||| ||||  |||||||||||    
T  17885478 ggtatgggttcggggttggaacctatatacccgttacccgtcccatacccatgttttaaaatcggggaaaaccca 17885552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 25905642 - 25905715
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||| ||||||||||| ||||||| | |||||||||||| || |||| ||||||||| ||| |||||||||||    
T  25905642 ggtatgagttcggggtgg-tacctatgtacccgttacccgtcccatacctgtgttttgagattggggaaaaccca 25905715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 43507458 - 43507532
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||||||| |||||| | ||||||| ||||||||||||  | ||||| |||||||||||  |||||||||||    
T  43507458 ggtatgggttcagggtgggtgcctatatacccgttacccgtctcatacccatgttttgaaatcggggaaaaccca 43507532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 153
Target Start/End: Complemental strand, 45708945 - 45708887
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttga 153  Q
    |||||| ||||||||||| ||||||||| |||||||||||| |  ||||||||||||||    
T  45708945 ggtatgagttcggggtgggtacctatatacccgttacccgtccaatacccgtgttttga 45708887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 170
Target Start/End: Complemental strand, 26004556 - 26004479
Alignment:
Q  93 ttggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||||| || |||||| || ||||||||| || |||||  ||||||||||   |||||||||||    
T  26004556 ttggtatgggttcggggtgggtatctatatacctgttacccgtcccatacccaagttttgaaatcgaggaaaacccaa 26004479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 167
Target Start/End: Original strand, 27063347 - 27063419
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacc 167  Q
    |||||| ||||||||||| ||| ||||| |||||||||||| |||||||||| || | ||||  |||||||||    
T  27063347 ggtatgagttcggggtgggtacatatattcccgttacccgtcccgtacccgtattattaaatcggggaaaacc 27063419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 170
Target Start/End: Complemental strand, 42908098 - 42908046
Alignment:
Q  118 tatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||||||| |||||||| |||||||||| |||||||||  ||||||||||||    
T  42908098 tatatccccattacccgtcccgtacccgtattttgaaatcggggaaaacccaa 42908046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 44985912 - 44985872
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||||||||||||| |||||||||||||||||| ||||    
T  44985912 aaacccaatcaaaacggagaaaatccgtcaaattagatttg 44985872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 2630653 - 2630579
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||| || |||||| ||||| |||||| || ||||| |||||| ||||  ||||||||||||    
T  2630653 ggtatgggttcggggtgggtatctatatacccgtcacccgtcccatacccatgtttt-aaatcggggaaaacccaa 2630579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 5565387 - 5565312
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||| ||||||| ||| |||| ||||||||||| | || || ||||  |||||||| |||||||||||||    
T  5565387 ggtatgggttaggggtgggtacatataaccccgttacccatcccatatccgtactttgaaatcagggaaaacccaa 5565312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 16079026 - 16079101
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||| |||| |||||||  |||||||| |||||||||||| || |||||||||||||| ||  | ||||||||||    
T  16079026 ggtataggtttggggtgggcacctatatacccgttacccgtcccatacccgtgttttgagatcggagaaaacccaa 16079101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 149
Target Start/End: Original strand, 17851867 - 17851921
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgtt 149  Q
    |||||||||||||| ||| |||||||||  ||||||||||| || ||||||||||    
T  17851867 ggtatgggttcgggatgggtacctatatatccgttacccgtcccatacccgtgtt 17851921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 167
Target Start/End: Original strand, 26874355 - 26874409
Alignment:
Q  113 atacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacc 167  Q
    |||||||||||   |||||| || ||||||||||||||||||||||| |||||||    
T  26874355 atacctatatcattgttacctgtaccgtacccgtgttttgaaattagagaaaacc 26874409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 166
Target Start/End: Original strand, 33841092 - 33841162
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaac 166  Q
    ||||||||||||||||  ||| |||| ||  ||||||||| || |||||||||||||||||  ||||||||    
T  33841092 gtatgggttcggggtgagtacatataaccatgttacccgtcccatacccgtgttttgaaatcggggaaaac 33841162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 156
Target Start/End: Original strand, 37217986 - 37218079
Alignment:
Q  66 aattgattttctacatttatgacggatttgg--tatgggttcggggtggatacctatatcccc-gttacccgttccgtacccgtgttttgaaat 156  Q
    ||||||||||||| ||| | ||||| |||||  |||| ||||||| | | ||| ||||||||| ||||||||| ||||||| ||||||||||||    
T  37217986 aattgattttctatattcaggacgggtttggggtatgagttcgggcttggtacttatatcccccgttacccgtcccgtacctgtgttttgaaat 37218079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 156
Target Start/End: Original strand, 39316983 - 39317069
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    ||||| |||||||  ||||||| ||| |||| |||| || ||||||| ||||| |||| ||||||| || |||||||||||||||||    
T  39316983 attttttacatttgagacggatatgggtatgagttcaggatggatacatatatacccgctacccgtcccatacccgtgttttgaaat 39317069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 170
Target Start/End: Complemental strand, 44845214 - 44845140
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||||||||||||||| ||  ||||||| | ||| |||| |||||||||| || ||||||  ||||||||||||    
T  44845214 gtatgggttcggggtgggtaaatatatcctcattaaccgtcccgtacccgtattatgaaatcggggaaaacccaa 44845140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 196
Target Start/End: Original strand, 7780107 - 7780140
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaatt 196  Q
    ||||||| ||||||||||||||||||||||||||    
T  7780107 aaacccagtcaaaacggggaaaatccgtcaaatt 7780140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 95 - 156
Target Start/End: Original strand, 27063151 - 27063212
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||| ||||||||||  ||| ||||||||||||| |||| | |||||||| |||||||||    
T  27063151 ggtatgagttcggggtgagtacatatatccccgttatccgtcctgtacccgtattttgaaat 27063212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 169
Target Start/End: Original strand, 48327459 - 48327532
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||| ||||| ||||||||||||||||||  |||| | | |||||||||| |||||||||  | |||||||||    
T  48327459 gtatgtgttcgaggtggatacctatatcccaattactcataccgtacccgtattttgaaatcggagaaaaccca 48327532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 170
Target Start/End: Complemental strand, 3909310 - 3909278
Alignment:
Q  138 cgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||||||||||| |||||||||||||||||||    
T  3909310 cgtacccgtgtttcgaaattagggaaaacccaa 3909278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 16866268 - 16866308
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| ||||||||||||||| |||||||||| ||||||    
T  16866268 aaacccagtcaaaacggggaaaacccgtcaaattgggtttg 16866308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 17885564 - 17885604
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| ||||||||||||||| |||||||||| ||||||    
T  17885564 aaacccagtcaaaacggggaaaacccgtcaaattgggtttg 17885604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 18825860 - 18825820
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| ||||||||||||||| |||||||||| ||||||    
T  18825860 aaacccagtcaaaacggggaaaacccgtcaaattgggtttg 18825820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 21702758 - 21702798
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| |||||||||| ||||||||||||||| ||||||    
T  21702758 aaacccagtcaaaacgggaaaaatccgtcaaattgggtttg 21702798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 30650730 - 30650770
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| ||||||||||||||| |||||||||| ||||||    
T  30650730 aaacccagtcaaaacggggaaaacccgtcaaattgggtttg 30650770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 38139786 - 38139746
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| |||||||||||||||||| ||||||| ||||||    
T  38139786 aaacccagtcaaaacggggaaaatccatcaaattgggtttg 38139746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 169
Target Start/End: Complemental strand, 41741527 - 41741456
Alignment:
Q  97 tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||| ||| |||||| || ||||||| ||||  | |||||||||||||||||  |||||||||||    
T  41741527 tatgggttcggg-tgggtacctacatacccgttatccgtctcatacccgtgttttgaaatcggggaaaaccca 41741456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 6e-21; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 4920809 - 4920908
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||| |||||||  ||||| ||||| |||||||||||||||||||||||||| |||||||||||| || |||||||||||||| ||  |||||||||||    
T  4920809 attttttacatttgggacgggtttgggtatgggttcggggtggatacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaaccca 4920908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 7350567 - 7350448
Alignment:
Q  17 agtaaaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttg-gtatgggttcggggtggata 115  Q
    |||||||| ||||||||||| | |||||  |||||||| || | ||||||||| |||||||||||||  ||||| |||  |||||||||||||||||||     
T  7350567 agtaaaatgatttagggtttcgattactatttatataaaagcgataataaattaattttctacatttgagacgggtttaagtatgggttcggggtggatg 7350468  T
Q  116 cctatatccccgttacccgt 135  Q
    ||||||||||| ||||||||    
T  7350467 cctatatccccattacccgt 7350448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 170
Target Start/End: Original strand, 6810091 - 6810241
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggattt-ggtatgggttcggggtggataccta 119  Q
    |||| ||||| |||||||||| ||  | |||||| ||||| |||||||||||||||  ||||   || || ||| |||||||||||||||||  ||| ||    
T  6810091 aaatcatttaaggtttgggtttctattgatataaaaggggcaataaattgattttcaccattcgggatgggtttgggtatgggttcggggtgagtactta 6810190  T
Q  120 tatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||| |||||||||||||||||||||||| | ||||  ||||||||||||    
T  6810191 tatcctcgttacccgttccgtacccgtgttctaaaatcggggaaaacccaa 6810241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 22 - 166
Target Start/End: Original strand, 8020549 - 8020694
Alignment:
Q  22 aataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttg-gtatgggttcggggtggatacctat 120  Q
    ||||||||||||||| ||||     |||||||| ||||||| ||||||||||||||||||| |  |||| |||| ||||| ||||| | ||  |||||||    
T  8020549 aataatttagggtttaggttttcctttatataaaaggggtagtaaattgattttctacattcagaacgggtttgcgtatgagttcgagatgagtacctat 8020648  T
Q  121 atccccgttacccgttccgtacccgtgttttgaaattagggaaaac 166  Q
    ||||| ||||||| ||| ||||||||||||||||||  ||||||||    
T  8020649 atccctgttacccattcagtacccgtgttttgaaatcggggaaaac 8020694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 16311452 - 16311313
Alignment:
Q  17 agtaaaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggata 115  Q
    |||||||| ||||||||||||| || ||  |||||||| |||| |||||||||||||||| |||||   ||| | ||||  |||||||||||||||| ||    
T  16311452 agtaaaatgatttagggtttggttt-ctatttatataaaagggataataaattgattttcaacattcgagacaggtttgaatatgggttcggggtgggta 16311354  T
Q  116 cctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||||||| |||| ||||  ||||| |||||||||||||    
T  16311353 cctatatccctgttatccgtctcgtactcgtgttttgaaat 16311313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 28569102 - 28569027
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||  |||||||||  ||||||| ||||    
T  28569102 ggtatgggttcggggtgggtacctatatccccgttacccgtcccgtacccgcattttgaaatcggggaaaatccaa 28569027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 63 - 170
Target Start/End: Complemental strand, 38006583 - 38006475
Alignment:
Q  63 ataaattgattttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattaggg 161  Q
    ||||||| |||||| |||||   ||||||||||| |||||||||||||||| |||||||||  | ||||| ||| || ||||||| |||||||||| |||    
T  38006583 ataaattaattttcaacattcgggacggatttgggtatgggttcggggtgggtacctatatatctgttacgcgtcccatacccgtattttgaaattgggg 38006484  T
Q  162 aaaacccaa 170  Q
    |||||||||    
T  38006483 aaaacccaa 38006475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 47 - 170
Target Start/End: Original strand, 38972881 - 38973005
Alignment:
Q  47 ttatataataggggtaataaattgattttctacatttatgacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccg 145  Q
    |||||||| |||| ||||||||||||||| | |||||  || || |||| ||||||||||||||||| ||||||||| |||||||||  | || |||||     
T  38972881 ttatataaaagggttaataaattgattttatgcatttgagatgggtttgagtatgggttcggggtgggtacctatattcccgttacctatcccataccca 38972980  T
Q  146 tgttttgaaattagggaaaacccaa 170  Q
    |||||||||||  || |||||||||    
T  38972981 tgttttgaaatcgggaaaaacccaa 38973005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 23045075 - 23045000
Alignment:
Q  92 tttggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacc 167  Q
    ||||||||||||||||||||| ||| |||||| ||||||||| | |||||||||| |||||||||  |||||||||    
T  23045075 tttggtatgggttcggggtgggtacatatatctccgttacccatcccgtacccgtattttgaaatcggggaaaacc 23045000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 4583127 - 4583201
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||| |||||||  |||||||| |||||||||||| || |||||||||||||||||  |||||||||||    
T  4583127 ggtatgggtttggggtgggaacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaaccca 4583201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 170
Target Start/End: Complemental strand, 40187816 - 40187663
Alignment:
Q  17 agtaaaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggata 115  Q
    |||||||| ||||||| |||   |||||  |||||||| || ||||||||||| |||||||| |||   ||||  ||||| |||| ||| ||| || |||    
T  40187816 agtaaaatgatttaggattttcattactatttatataaaagaggtaataaattaattttctatattcgggacgagtttgggtatgagtttggg-tgaata 40187718  T
Q  116 cctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||| |||||||||||  || ||||||||||||||||| ||||||||||||    
T  40187717 cctatatctccgttacccgtctcgcacccgtgttttgaaattggggaaaacccaa 40187663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 156
Target Start/End: Complemental strand, 27900557 - 27900421
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggataccta 119  Q
    |||| |||||||||||  ||| ||  |||||||| || || |||||||||||||| ||||||   | ||||||||| |||||||||| | ||| ||||||    
T  27900557 aaatgatttagggtttcagtttctatttatataaaagaggaaataaattgattttatacattcggggcggatttgggtatgggttcgagatgggtaccta 27900458  T
Q  120 tatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    ||||| | |||||||| || ||||| |||||||||||    
T  27900457 tatccacattacccgtcccatacccatgttttgaaat 27900421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 156
Target Start/End: Original strand, 29664904 - 29665040
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggataccta 119  Q
    |||| |||||| ||||| ||| ||  ||| |||| ||||||| |||||||||||| ||||||   ||||| ||||| |||| |||||  |||| ||||||    
T  29664904 aaatgatttagagtttgagtttctatttaaataaaaggggtagtaaattgattttgtacattcgggacgggtttgggtatgagttcgaagtgggtaccta 29665003  T
Q  120 tatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||||||||||| |   ||||||||||||||||||    
T  29665004 tatccccgttacccatcatgtacccgtgttttgaaat 29665040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 170
Target Start/End: Complemental strand, 32575068 - 32574944
Alignment:
Q  47 ttatataataggggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccg 145  Q
    |||||||| ||||||||||||||||| |||||||||   | ||| ||||| | |||||||||| ||| ||| |||||||  ||||||| | ||||| | |    
T  32575068 ttatataaaaggggtaataaattgatattctacattcggggcgggtttgggtttgggttcgggatgggtacatatatccatgttacccatcccgtatctg 32574969  T
Q  146 tgttttgaaattagggaaaacccaa 170  Q
    |||||||||||  ||||||||||||    
T  32574968 tgttttgaaatcggggaaaacccaa 32574944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 2681224 - 2681299
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||||||||||||||||||||  |||||||| |||||| | ||||||| || |||||||||  ||||||||||||    
T  2681224 ggtatgggttcggggtggatactcatatccccattacccatcccgtacctgtattttgaaatcggggaaaacccaa 2681299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 10822607 - 10822532
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||| ||| |||| ||||||||||||| |  |||||||||||||||||  | ||||||||||    
T  10822607 ggtatgggttcggggtgggtacatataaccccgttacccgtcctatacccgtgttttgaaatcggagaaaacccaa 10822532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 15890215 - 15890288
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||| ||| ||||||||| |||||||||||| || |||||||||||||||||  | |||||||||    
T  15890215 ggtatgggttcggg-tgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggagaaaaccca 15890288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 169
Target Start/End: Complemental strand, 20973577 - 20973503
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||||| ||||||||| |||||||||| | || |||||||||||  ||||  |||||||||||    
T  20973577 ggtatgggttcggggtgggtacctatatacccgttacccatcccatacccgtgtttgaaaatcggggaaaaccca 20973503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 6092624 - 6092559
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgt 135  Q
    ||||| |||||||  ||||||||||| |||||||||||||||| ||||||||| ||||||||||||    
T  6092624 attttttacatttgggacggatttgggtatgggttcggggtgggtacctatatacccgttacccgt 6092559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 208
Target Start/End: Complemental strand, 35194095 - 35193951
Alignment:
Q  71 attttctacatttatgacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||||||||   ||||| |||| ||||| ||| ||||||| ||||||||| |||||||||||| || |||||||||||| |||  || ||| |||||    
T  35194095 attttctacattcgggacgggtttgagtatgagtttggggtgggtacctatatacccgttacccgtcccatacccgtgttttaaaaacagagaataccca 35193996  T
Q  170 a------tcaaaacggggaaaatccgtcaaattaggtttgatttg 208  Q
    |       ||||||||  ||||||||||||||| |||||||||||    
T  35193995 aatccagccaaaacggaaaaaatccgtcaaattgggtttgatttg 35193951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 17853288 - 17853248
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  17853288 aaacccaatcaaaacggggaaaacccgtcaaattaggtttg 17853248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 33727996 - 33727956
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  33727996 aaacccaatcaaaacggggaaaatccgtcaaattgggtttg 33727956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 12712638 - 12712563
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||| ||||| ||| |||||| |||||| |||| |||||||||| |||||||||  | ||||||||||    
T  12712638 ggtatgggttcgaggtgggtacatatatctccgttatccgtcccgtacccgtattttgaaatcggagaaaacccaa 12712563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 169
Target Start/End: Complemental strand, 12834688 - 12834581
Alignment:
Q  63 ataaattgattttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattaggg 161  Q
    ||||||| ||||| |||||||  ||||| | ||| |||||||||||||| | ||||||||| || ||||||||| || || || |||||||||||| | |    
T  12834688 ataaattaattttttacatttgggacgggtatgggtatgggttcggggtaggtacctatatacctgttacccgtcccatatccatgttttgaaattggag 12834589  T
Q  162 aaaaccca 169  Q
    ||||||||    
T  12834588 aaaaccca 12834581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 96 - 170
Target Start/End: Complemental strand, 12773901 - 12773827
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||||||||| ||||| ||| |||||| |||||| |||| |||||||||| |||||||||  | ||||||||||    
T  12773901 gtatgggttcgaggtgggtacatatatctccgttatccgtcccgtacccgtattttgaaatcggagaaaacccaa 12773827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 170
Target Start/End: Complemental strand, 6156024 - 6155926
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||| |||||| |||||| ||||| |||||||||||||||| ||| ||||| ||  ||||| || |  |||||||||||||||||  |||||||||||    
T  6156024 attttcaacatttgtgacggttttgggtatgggttcggggtgggtacatatatacc--ttacctgtcctatacccgtgttttgaaatcggggaaaaccca 6155927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 156
Target Start/End: Complemental strand, 12866632 - 12866571
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||||||||| ||||| ||||||||| || ||||||||| || ||||| |||||||||||    
T  12866632 ggtatgggttcgcggtgggtacctatatacctgttacccgtcccatacccatgttttgaaat 12866571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 169
Target Start/End: Original strand, 40517815 - 40517888
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||||||||||||| || |||||| |||||||||| | || |||||||||||||  ||  |||||||||||    
T  40517815 gtatgggttcggggtgggtaactatatacccgttacccatcccatacccgtgttttgggatcggggaaaaccca 40517888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 457539 - 457467
Alignment:
Q  10 ctctgtaagtaaaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatt 82  Q
    |||||||||| |||| ||||||| ||| |||| ||  |||||||| ||| |||||||||||||||| ||||||    
T  457539 ctctgtaagtgaaatgatttaggattttggtttctatttatataaaaggtgtaataaattgattttatacatt 457467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 4583213 - 4583253
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||||||||||||||||||| |||||||||| ||||||    
T  4583213 aaacccaatcaaaacggggaaaacccgtcaaattgggtttg 4583253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 135
Target Start/End: Complemental strand, 18116587 - 18116547
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgt 135  Q
    |||||| ||||||||||||||| ||||||||||||||||||    
T  18116587 ggtatgagttcggggtggatacatatatccccgttacccgt 18116547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 156
Target Start/End: Original strand, 35311831 - 35311891
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||||||||| |||| |||||||||  | ||||||||| || |||||||||||||||||    
T  35311831 gtatgggttcggagtgggtacctatatatctgttacccgtcccatacccgtgttttgaaat 35311891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 135
Target Start/End: Original strand, 43523767 - 43523807
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgt 135  Q
    |||||| ||||||||||||||| ||||||||||||||||||    
T  43523767 ggtatgagttcggggtggatacatatatccccgttacccgt 43523807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 13402081 - 13402030
Alignment:
Q  99 tgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttt 150  Q
    ||||||||| |||| |||||| || ||||||||||||||| |||||||||||    
T  13402081 tgggttcggagtgggtacctaaatacccgttacccgttccatacccgtgttt 13402030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 153
Target Start/End: Complemental strand, 33728071 - 33728024
Alignment:
Q  106 ggggtggatacctatatccccgttacccgttccgtacccgtgttttga 153  Q
    ||||||| ||||||||| |||||||||||| || ||||||||||||||    
T  33728071 ggggtgggtacctatatacccgttacccgtcccatacccgtgttttga 33728024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 153
Target Start/End: Complemental strand, 42987585 - 42987502
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttga 153  Q
    ||||| |||||||  ||||| ||||| |||||||||||| ||| |||||||||  ||||||| ||| || ||||||||||||||    
T  42987585 attttttacatttgggacgggtttgggtatgggttcgggatgggtacctatatatccgttacacgtcccatacccgtgttttga 42987502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 169
Target Start/End: Complemental strand, 17853373 - 17853300
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||||||||| |||| || ||||||  ||||||||||| || |||||||| ||||||||  |||||||||||    
T  17853373 ggtatgggttcggagtgggtatctatatatccgttacccgtcccatacccgtg-tttgaaatcggggaaaaccca 17853300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 165
Target Start/End: Original strand, 28045664 - 28045732
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaa 165  Q
    |||||||||||||| ||| ||||||||| |||||||||||| || ||  ||||||||| ||||||||||||    
T  28045664 ggtatgggttcggg-tgggtacctatatacccgttacccgtcccatattcgtgttttg-aattagggaaaa 28045732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 156
Target Start/End: Original strand, 17153137 - 17153238
Alignment:
Q  56 aggggtaataaattgattttctacatttatgacggattt-ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaa 154  Q
    |||||||||||||||||||||||||||   ||||| ||| |||||||||| ||| ||  ||| ||||||   |||| |||| |||||||| |||||| ||    
T  17153137 aggggtaataaattgattttctacattcgggacgggtttgggtatgggtttgggatgagtacatatatcatagttatccgtcccgtacccatgttttaaa 17153236  T
Q  155 at 156  Q
    ||    
T  17153237 at 17153238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 5908683 - 5908643
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    |||||||||||||| |||||||| |||||||||| ||||||    
T  5908683 aaacccaatcaaaatggggaaaacccgtcaaattgggtttg 5908643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 150
Target Start/End: Complemental strand, 5908794 - 5908714
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttt 150  Q
    ||||| |||||||  ||||| ||||| |||||||| ||||||  ||| ||||| |||||||||||| || |||||||||||    
T  5908794 attttttacatttgggacgggtttgggtatgggtttggggtgtgtacatatatacccgttacccgtcccatacccgtgttt 5908714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 16311288 - 16311248
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||||||||| |||| |||| |||||||||||||||||    
T  16311288 aaacccaatcaaagcgggaaaaaaccgtcaaattaggtttg 16311248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 47 - 167
Target Start/End: Complemental strand, 4709 - 4589
Alignment:
Q  47 ttatataataggggtaataaattgattttctacatttatgacggatttggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgt 146  Q
    |||||||| |||||| |||| ||||||||||||||| | |  || || |||||||||||| ||||| || ||||||||| |||||| || || |||||||    
T  4709 ttatataaaaggggttataatttgattttctacattcaaggtggcttaggtatgggttcgtggtgggtagctatatccctgttacctgtcccatacccgt 4610  T
Q  147 gttttgaaattagggaaaacc 167  Q
     |||||||||| |||||||||    
T  4609 attttgaaattggggaaaacc 4589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 33401 - 33476
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||| ||| ||||| |||||||||||| || |||||||||||||||||  ||||||||||||    
T  33401 ggtatgggttcggggtgggtacatatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaa 33476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 1e-18; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 151
Target Start/End: Original strand, 25210311 - 25210442
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatga-cggatttggtatgggttcggggtggataccta 119  Q
    |||| |||||||||||| ||| ||  |||||||| | |||||| ||||||||||||||||||   ||  || ||||||||||||| ||||||| ||| ||    
T  25210311 aaatgatttagggtttgagtttctatttatataaaatgggtaacaaattgattttctacattcgggaggggttttggtatgggtttggggtgggtacata 25210410  T
Q  120 tatccccgttacccgttccgtacccgtgtttt 151  Q
    ||||| |||||||||| || ||||||||||||    
T  25210411 tatcctcgttacccgtcccatacccgtgtttt 25210442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 37106701 - 37106775
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||||||||| |||| ||||||||| |||||||||||| || |||||||||||||||||  |||||||||||    
T  37106701 ggtatgggttcggagtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaaccca 37106775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 72 - 170
Target Start/End: Complemental strand, 35248489 - 35248390
Alignment:
Q  72 ttttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||||||||| | ||||| ||||| |||||||||||||||| ||||| ||||||| |||||||| || ||||||||||||| |||   |||||||||||    
T  35248489 ttttctacattcaggacgggtttgggtatgggttcggggtgggtacctttatcccctttacccgtcccatacccgtgttttgtaatcgtggaaaacccaa 35248390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 203
Target Start/End: Complemental strand, 6027968 - 6027855
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaac------ccaatcaaaacggggaaaatccg 189  Q
    ||||||||||||||||| ||||||||| || |||||||||  | ||||| |||||| ||||  ||||||||      ||||||||||||||||||| |||    
T  6027968 gtatgggttcggggtgggtacctatatacctgttacccgtctcatacccatgttttaaaatcggggaaaacccaaacccaatcaaaacggggaaaacccg 6027869  T
Q  190 tcaaattaggtttg 203  Q
    ||||||| ||||||    
T  6027868 tcaaattgggtttg 6027855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 9632395 - 9632469
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||||||||||||||| ||| |||||||| || ||||||||||| || ||  |||||||||||    
T  9632395 ggtatgggttcggggtggatacctatatacccattacccgtcccatacccgtgtttcgagatcggggaaaaccca 9632469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 30846955 - 30847029
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    |||||||||||||||||| ||||||||| |||||||||||| || ||||||||||| || ||  |||||||||||    
T  30846955 ggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaaccca 30847029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 167
Target Start/End: Complemental strand, 24414212 - 24414140
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacc 167  Q
    |||||||||||||||||| ||||||||| || ||||||||| || |||||||||||||| ||  |||||||||    
T  24414212 ggtatgggttcggggtgggtacctatatacctgttacccgtcccatacccgtgttttgagatcggggaaaacc 24414140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 97 - 156
Target Start/End: Original strand, 3547177 - 3547236
Alignment:
Q  97 tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||||||||||||| ||| |||||| ||||||||||| |||||||||| |||||||||    
T  3547177 tatgggttcggggtgggtacatatatctccgttacccgtcccgtacccgtattttgaaat 3547236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 6164553 - 6164478
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||| ||||||||||| ||| |||||| ||||||||||| ||||||||   |||||||||| ||||||||||||    
T  6164553 ggtatgagttcggggtgggtacatatatcaccgttacccgtcccgtacccaaattttgaaattggggaaaacccaa 6164478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 71 - 153
Target Start/End: Complemental strand, 8916042 - 8915959
Alignment:
Q  71 attttctacatttatgacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttga 153  Q
    ||||| |||||||  ||||| |||| ||||||||||||||||| ||||||||| || ||||||||| || ||||||||||||||    
T  8916042 attttttacatttgggacgggtttgagtatgggttcggggtgggtacctatatacctgttacccgtcccatacccgtgttttga 8915959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 166
Target Start/End: Complemental strand, 13705441 - 13705370
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaac 166  Q
    |||||||||||||||||| ||||||||| ||||||||| ||  | |||||||||||||||||  ||||||||    
T  13705441 ggtatgggttcggggtgggtacctatatacccgttacctgtctcatacccgtgttttgaaatcggggaaaac 13705370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 166
Target Start/End: Complemental strand, 38342599 - 38342528
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaac 166  Q
    |||||||||||||||||| ||| |||||||||||||||||| ||||| |||| |||| ||||  ||||||||    
T  38342599 ggtatgggttcggggtgggtacatatatccccgttacccgtcccgtatccgtattttaaaatcggggaaaac 38342528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 142
Target Start/End: Original strand, 11958941 - 11959071
Alignment:
Q  13 tgtaagtaaaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacg-gatttggtatgggttcggggtg 111  Q
    ||||||| |||| || |||| |||| ||| |||||||||||| || ||||||||||||||||| |||||| |||| | | || |||||| ||||||||      
T  11958941 tgtaagttaaatgatctaggttttgagtttctgcttatataaaagaggtaataaattgattttatacattcatgatgagtttgggtatgagttcggggca 11959040  T
Q  112 gatacctatatccccgttacccgttccgtac 142  Q
      ||| ||||||| |||||||||| ||||||    
T  11959041 tgtacatatatcctcgttacccgtcccgtac 11959071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 166
Target Start/End: Original strand, 35965298 - 35965414
Alignment:
Q  50 tataataggggtaataaattgattttctacatttatgacggattt-ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgt 148  Q
    ||||| ||||| |||||||||||||||||||||   ||||| ||| ||||||||||||| |||| ||| | ||||||| |||| |  ||| |||||||||    
T  35965298 tataaaaggggcaataaattgattttctacattcgggacgggtttgggtatgggttcggagtgggtacatgtatccccattacac-atccatacccgtgt 35965396  T
Q  149 tttgaaattagggaaaac 166  Q
    ||||||||  ||||||||    
T  35965397 tttgaaatcggggaaaac 35965414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 132
Target Start/End: Original strand, 13531883 - 13531995
Alignment:
Q  21 aaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttg-gtatgggttcggggtggataccta 119  Q
    |||| |||||||||||| ||| ||  |||||||| | || ||||||||||||||||||||| |  | ||| |||| || ||||||||||||| |||| ||    
T  13531883 aaatgatttagggtttgagtttctatttatataaaatggataataaattgattttctacatgtggggcgggtttgagtgtgggttcggggtgaatacata 13531982  T
Q  120 tatccccgttacc 132  Q
    ||||| |||||||    
T  13531983 tatcctcgttacc 13531995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 30978936 - 30979009
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||||||| ||||||| ||||| ||  ||||||||||| |||||||||  || |||||||||    
T  30978936 ggtatgggttcggggtggatacatatatcctcgttatcc--tccgtacccgtattttgaaatcgggaaaaacccaa 30979009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 36128100 - 36128060
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  36128100 aaacccagtcaaaacggggaaaatccgtcaaattaggtttg 36128060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 37999467 - 37999566
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||| |||||||  ||||| ||||| |||| ||||||||||| ||| ||||| ||||||||||||  | |||||||||||||| ||  |||||||||||    
T  37999467 attttttacatttgggacgggtttgggtatgagttcggggtgggtacttatatacccgttacccgtctcatacccgtgttttgagatcggggaaaaccca 37999566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 166
Target Start/End: Original strand, 43371562 - 43371633
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaac 166  Q
    |||||| ||| ||||||| ||| |||||||||||||||||| |||||||||| |||| ||||  ||||||||    
T  43371562 ggtatgagtttggggtgggtacatatatccccgttacccgtcccgtacccgtattttaaaatcggggaaaac 43371633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 169
Target Start/End: Complemental strand, 7314728 - 7314654
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||||||||||||||  |||||||| |||||||||||| || ||| ||| |||| ||||  |||||||||||    
T  7314728 ggtatgggttcggggtgggaacctatatacccgttacccgtcccatactcgtattttaaaatcggggaaaaccca 7314654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 14331536 - 14331610
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||||||||| |||| ||| |||||||||||||||||| || |||| || |||| ||||  |||||||||||    
T  14331536 ggtatgggttcggagtgggtacatatatccccgttacccgtcccatacctgtatttttaaataggggaaaaccca 14331610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 165
Target Start/End: Complemental strand, 37472839 - 37472769
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaa 165  Q
    ||||||||||||  |||| |||||| || |||||||||||| || |||||||||||||||||  |||||||    
T  37472839 ggtatgggttcgaagtgggtacctaaatacccgttacccgtcccatacccgtgttttgaaatcggggaaaa 37472769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 169
Target Start/End: Complemental strand, 10208509 - 10208436
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||||||||||| | |||||||||  || |||||||| || |||||||||||| | ||| |||||||||||    
T  10208509 gtatgggttcggggtaggtacctatatatccattacccgtcccatacccgtgttttaagattggggaaaaccca 10208436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 156
Target Start/End: Original strand, 18485657 - 18485718
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    ||||||||||| |||||| ||| |||||||||||||||||| | |||||||| |||| ||||    
T  18485657 ggtatgggttcagggtgggtacatatatccccgttacccgtactgtacccgtattttaaaat 18485718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 170
Target Start/End: Complemental strand, 35510533 - 35510448
Alignment:
Q  86 gacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||| |||||  |||| ||||||||||||||||| | ||||||||   ||| | ||||||||||||| ||||||||||||    
T  35510533 gacggatttgagtatgaattcgaggtggatacctatatcctcattacccgtcttgtatctgtgttttgaaattggggaaaacccaa 35510448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 166
Target Start/End: Original strand, 45256798 - 45256903
Alignment:
Q  62 aataaattgattttctacatttatgacggattt-ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagg 160  Q
    |||||| | ||||| |||||||  ||||| ||| |||||||||||||||||| ||| ||||| ||| ||| ||||  | |||||||||||||||||  ||    
T  45256798 aataaagtaattttttacatttgggacgggtttaggtatgggttcggggtgggtacttatatacccattaaccgtctcatacccgtgttttgaaatcggg 45256897  T
Q  161 gaaaac 166  Q
    ||||||    
T  45256898 gaaaac 45256903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 122
Target Start/End: Original strand, 10920629 - 10920681
Alignment:
Q  71 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatat 122  Q
    ||||| |||||||  ||||||||||| ||||||||||||||||||||||||||    
T  10920629 attttttacatttgggacggatttgggtatgggttcggggtggatacctatat 10920681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 24414126 - 24414086
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||||||||||||||||||| |||||||||| ||||||    
T  24414126 aaacccaatcaaaacggggaaaacccgtcaaattgggtttg 24414086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 34458906 - 34458838
Alignment:
Q  102 gttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||  |||||| ||||||  | |||| ||||||||||||||||||||||||| | ||||||||||    
T  34458906 gttcgggacggatacatatatcttcattactcgttccgtacccgtgttttgaaattggagaaaacccaa 34458838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 42798067 - 42798011
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttg 152  Q
    ||||||||||||||||| ||| ||||| ||||||||||||  | |||||||||||||    
T  42798067 gtatgggttcggggtgggtacttatatacccgttacccgtctcatacccgtgttttg 42798011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 15546753 - 15546828
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||||||||| |||||| ||  |||| ||  ||||||||| || |||||||||||||||||  ||||||||||||    
T  15546753 ggtatgggttcagggtgggtatatataaccatgttacccgtcccatacccgtgttttgaaatcggggaaaacccaa 15546828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 22900803 - 22900878
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||| ||||||||||| ||  |||| ||||||||| ||| || |||||||||||||||||  || |||||||||    
T  22900803 ggtatgagttcggggtgggtatatataaccccgttactcgtcccatacccgtgttttgaaatcgggaaaaacccaa 22900878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 156
Target Start/End: Original strand, 30696863 - 30696994
Alignment:
Q  26 atttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatga-cggatttggtatgggttcggggtggatacctatatcc 124  Q
    ||||||||||||  || ||  |||||||| | |||||||||||||||||| |||||||  ||  || || |||||| ||||||||||| ||| ||||||     
T  30696863 atttagggtttgaatttctatttatataaaatgggtaataaattgattttttacatttgggataggtttgggtatgagttcggggtgggtacatatatct 30696962  T
Q  125 ccgttacccgttccgtacccgtgttttgaaat 156  Q
    | |||||||||  |||| || |||||| ||||    
T  30696963 ctgttacccgtctcgtatccatgttttaaaat 30696994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 150
Target Start/End: Complemental strand, 36128186 - 36128131
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttt 150  Q
    |||||||||||||||||  ||||||||| |||||||||| | || |||||||||||    
T  36128186 ggtatgggttcggggtgagtacctatatacccgttacccatcccatacccgtgttt 36128131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 156
Target Start/End: Original strand, 45115569 - 45115628
Alignment:
Q  97 tatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    |||||||||||| ||| ||||||||| || |||||||||  | |||||||||||||||||    
T  45115569 tatgggttcgggatgggtacctatatacctgttacccgtctcatacccgtgttttgaaat 45115628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 112
Target Start/End: Complemental strand, 29656864 - 29656798
Alignment:
Q  47 ttatataataggggtaataaattgattttctacatttatgacggatttg-gtatgggttcggggtgg 112  Q
    |||||||| |||| ||||||||||||||| |||||||  ||| |||||| ||||| |||||||||||    
T  29656864 ttatataaaagggataataaattgattttatacatttgagacagatttgtgtatgagttcggggtgg 29656798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 196
Target Start/End: Complemental strand, 7314642 - 7314609
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaatt 196  Q
    ||||||| ||||||||||||||||||||||||||    
T  7314642 aaacccagtcaaaacggggaaaatccgtcaaatt 7314609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 153
Target Start/End: Original strand, 13830746 - 13830802
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttga 153  Q
    ||||||||||||||||| ||| ||||| ||||||| |||| || ||||||||||||||    
T  13830746 gtatgggttcggggtgggtacttatatacccgtta-ccgtcccatacccgtgttttga 13830802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 30847041 - 30847081
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    ||||||| ||||||||||||||| |||||||||| ||||||    
T  30847041 aaacccagtcaaaacggggaaaacccgtcaaattgggtttg 30847081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 44746103 - 44746063
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaattaggtttg 203  Q
    |||| |||||||||||||||||| |||||||||| ||||||    
T  44746103 aaactcaatcaaaacggggaaaacccgtcaaattgggtttg 44746063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 170
Target Start/End: Complemental strand, 44746222 - 44746114
Alignment:
Q  63 ataaattgattttctacatttatgacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattaggg 161  Q
    ||||| |||||||||||||||  ||||| |||| ||||| ||| |  |||| ||| ||||| ||| |||||||| || ||  |||||||||||||  |||    
T  44746222 ataaagtgattttctacatttgggacgggtttgagtatgagtttgaagtgggtacatatatacccattacccgtcccatattcgtgttttgaaatcgggg 44746123  T
Q  162 aaaacccaa 170  Q
    |||||||||    
T  44746122 aaaacccaa 44746114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 128201 - 128126
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||| ||| ||||||||| |||||||| |||||||||| || ||||||| |  |||||||||    
T  128201 ggtatgggttcggggtgggtacatatatccccattacccgtcccgtacccgtattatgaaattggaaaaaacccaa 128126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 146
Target Start/End: Complemental strand, 105549 - 105498
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgt 146  Q
    |||||||||||||||||| ||| |||||||| ||||||||| ||||||||||    
T  105549 ggtatgggttcggggtgggtacatatatccctgttacccgtcccgtacccgt 105498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 211372 - 211447
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    |||||||||||||||||| ||| |||||||| |||||||||  ||||||||| |||||||||  | ||||||||||    
T  211372 ggtatgggttcggggtgggtacatatatccctgttacccgtctcgtacccgtattttgaaatcggagaaaacccaa 211447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 96 - 170
Target Start/End: Original strand, 2978 - 3052
Alignment:
Q  96 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||||||||||||||| ||| |||||||| |||| |||| | |||||||| |||||||||  ||||||||||||    
T  2978 gtatgggttcggggtgggtacatatatcccagttatccgtcctgtacccgtattttgaaatcggggaaaacccaa 3052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 90580 - 90679
Alignment:
Q  71 attttctacatttatgacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 169  Q
    ||||||| |||| | |||| ||||| |||||||||||||| || |||| |||| ||||||| ||||  | |||||||||||||||||  |||||||||||    
T  90580 attttctgcattcaggacgaatttgtgtatgggttcggggagggtaccaatatacccgttaaccgtctcatacccgtgttttgaaatcggggaaaaccca 90679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 196
Target Start/End: Original strand, 90685 - 90718
Alignment:
Q  163 aaacccaatcaaaacggggaaaatccgtcaaatt 196  Q
    ||||||| ||||||||||||||||||||||||||    
T  90685 aaacccagtcaaaacggggaaaatccgtcaaatt 90718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 55977 - 55903
Alignment:
Q  95 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaa 170  Q
    ||||||| |||||||||| ||| |||||||| ||||||| | | |||||| | |||||||||| ||||||||||||    
T  55977 ggtatggattcggggtgggtacatatatccctgttaccc-tcctgtacccatattttgaaattggggaaaacccaa 55903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1322 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold1322
Description:

Target: scaffold1322; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 1070 - 1119
Alignment:
Q  47 ttatataataggggtaataaattgattttctacatttatgacggatttgg 96  Q
    |||||||| | |||||||||||| |||||||||||| ||||||| |||||    
T  1070 ttatataaaatgggtaataaattaattttctacattcatgacgggtttgg 1119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 17530 - 17474
Alignment:
Q  100 gggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    ||||| ||| |||||||||||||||||||||||| | | ||| || |||||||||||    
T  17530 gggtttgggatggatacctatatccccgttacccttcctgtatccatgttttgaaat 17474  T

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Target: scaffold0198 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 156
Target Start/End: Complemental strand, 20854 - 20758
Alignment:
Q  61 taataaattgattttctacatttatgacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 156  Q
    ||||||||||||||| ||||||    |||| |||| ||||||||||| ||||||||  ||||||||| ||||||||  | ||| || ||||||||||    
T  20854 taataaattgattttttacattcggaacgggtttgagtatgggttcgaggtggatatttatatccccattacccgtctcatactcgagttttgaaat 20758  T

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