View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15534_high_7 (Length: 259)
Name: NF15534_high_7
Description: NF15534
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15534_high_7 |
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Alignment Details
Target: chr3 (Bit Score: 161; Significance: 6e-86; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 15 - 199
Target Start/End: Original strand, 8003784 - 8003968
Alignment:
| Q |
15 |
taaatctaaattgactcgttaacaccctcctcatgaacaaactcattaaatttccaacacttggtttagtttcaaacatctcatacattttttatttgat |
114 |
Q |
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| T |
8003784 |
taaatcaaaattgactcgttaacaccctcctcatgaacaaactcataaaatttccaacacttggtttagtttcaaatatctcatacattttttatttgat |
8003883 |
T |
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| Q |
115 |
aaaatctggacattaattccatccatcttattattgatttgtctttgaataaatttcaagggctcacataatctaacctctagtg |
199 |
Q |
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| T |
8003884 |
aaaatctggacattaattccatccgtcttattattgatttgtctttgcataaatttcaagggctcacataatctaagctctagtg |
8003968 |
T |
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