View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15536_high_3 (Length: 510)
Name: NF15536_high_3
Description: NF15536
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15536_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 471; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 471; E-Value: 0
Query Start/End: Original strand, 1 - 499
Target Start/End: Complemental strand, 40547856 - 40547358
Alignment:
| Q |
1 |
tatattttttccatgttgcctatgatcatagccatcttgttgttgcacatcccttggagaacttgcacagcacaactgtgatattcatcagtttcctgac |
100 |
Q |
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| T |
40547856 |
tatattttttccatgttgcctatgatcatagccatcttgttgttgcacatcccttggagaacttgcacagcacaactgtgatattcatcagtttcctgac |
40547757 |
T |
|
| Q |
101 |
ctgagtgtgtggaactcattttgttttgaactaatgaatttgaagaaattggtcttaaatttataaattatgccttcattaccattcaactgtttctact |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |
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| T |
40547756 |
ctgagtgtgtggaactcattttgttttgaactaatgaatttgaagaaattggtcttaaatttataaattatgccttgattaccaatcaactgtttctact |
40547657 |
T |
|
| Q |
201 |
tcccaatgaaaatagaccttctgtatagataaaaattttagtcagattttcattcactggcataaattcagaacaaaaatagtatactgtatgttttgga |
300 |
Q |
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||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40547656 |
tcccaatgaaaatagaccttctgtatagataaaaaatttagttagattttcattcactggcataaattcagaacaaaaatagtatactgtatgttttgga |
40547557 |
T |
|
| Q |
301 |
aggaaagttcataatttctatctatagcaaccaaaccctattattaaaaacttatctcataatttaaatagcacaactaatcaattttattgattttcaa |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
40547556 |
aggaaagttcataatttctatctatagcaaccaaaccctattattaaaaacttatctcataatttaaatagcacaactaatcaaatttattgattttcaa |
40547457 |
T |
|
| Q |
401 |
cactaccccaccagtcaaattaatcatcaacttaacataaccaaacttcctaaaagagttcttggagaaagatcggcctaaacaaaccaaacacaagaa |
499 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
40547456 |
cactaccccaccagtcaaattaatcatcaacgtaacataaccaaacttcctaaaagagttcttggagaaagatcagcctaaacaaaccaaacacaagaa |
40547358 |
T |
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