View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15537_low_8 (Length: 236)
Name: NF15537_low_8
Description: NF15537
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15537_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 38376954 - 38376733
Alignment:
| Q |
1 |
catacgttctagctttcaaagactcacaagcttgggcttcttcattcatagcctgcgagcggaagattgttcagcaatgtgaacaaggggcgaggattgg |
100 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
38376954 |
catacgttctagctttcaaagactcacatgcttgggcttcttcattcatagcctgcgagcggaagattgttcagcaatgcgaacaaggggcgaggattgg |
38376855 |
T |
|
| Q |
101 |
ttgcgcaattaacgcttctagcaagtgcaagcctccttggtggaaggttttgtcaggtgttaaacttgaagatttgaaggaacgagaggcgtgtgaagtg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
38376854 |
ttgcgcaattaacgcttctagcaagtgcaagcctccttggtggaaggttttgtcaggtgttaaacttgaagatttgaaggaacgagaggcttgtgaagtg |
38376755 |
T |
|
| Q |
201 |
cgcgaaatggaggagtgttttg |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
38376754 |
cgcgaaatggaggagtgttttg |
38376733 |
T |
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